References analysis of the Wikipedia article "List of intestinal epithelial differentiation genes" in the English version

doi.org

Noah, T. K.; Donahue, B.; Shroyer, N. F. (2011). "Intestinal development and differentiation". Experimental Cell Research. 317 (19): 2702–10. doi:10.1016/j.yexcr.2011.09.006. PMC 3210330. PMID 21978911.

Andreu, P.; Colnot, S.; Godard, C.; Gad, S.; Chafey, P.; Niwa-Kawakita, M.; Laurent-Puig, P.; Kahn, A.; Robine, S.; Perret, C.; Romagnolo, B. (2005). "Crypt-restricted proliferation and commitment to the Paneth cell lineage following Apc loss in the mouse intestine". Development. 132 (6): 1443–1451. doi:10.1242/dev.01700. PMID 15716339.

Vandussen, K. L.; Samuelson, L. C. (2010). "Mouse Atonal Homolog 1 Directs Intestinal Progenitors to Secretory Cell Rather than Absorptive Cell Fate". Developmental Biology. 346 (2): 215–223. doi:10.1016/j.ydbio.2010.07.026. PMC 2945455. PMID 20691176.

Shroyer, N. F.; Helmrath, M. A.; Wang, V. Y. –C.; Antalffy, B.; Henning, S. J.; Zoghbi, H. Y. (2007). "Intestine-Specific Ablation of Mouse atonal homolog 1 (Math1) Reveals a Role in Cellular Homeostasis". Gastroenterology. 132 (7): 2478–2488. doi:10.1053/j.gastro.2007.03.047. PMID 17570220.

Yang, Q.; Bermingham, N. A.; Finegold, M. J.; Zoghbi, H. Y. (2001). "Requirement of Math1 for Secretory Cell Lineage Commitment in the Mouse Intestine". Science. 294 (5549): 2155–2158. Bibcode:2001Sci...294.2155Y. doi:10.1126/science.1065718. PMID 11739954. S2CID 27540123.

Muncan, V.; Heijmans, J.; Krasinski, S. D.; Büller, N. V.; Wildenberg, M. E.; Meisner, S.; Radonjic, M.; Stapleton, K. A.; Lamers, W. H.; Biemond, I.; Van Den Bergh Weerman, M. A.; O'Carroll, D. N.; Hardwick, J. C.; Hommes, D. W.; Van Den Brink, G. R. (2011). "Blimp1 regulates the transition of neonatal to adult intestinal epithelium". Nature Communications. 2: 452–. Bibcode:2011NatCo...2..452M. doi:10.1038/ncomms1463. PMC 3167062. PMID 21878906.

Harper, J.; Mould, A.; Andrews, R. M.; Bikoff, E. K.; Robertson, E. J. (2011). "The transcriptional repressor Blimp1/Prdm1 regulates postnatal reprogramming of intestinal enterocytes". Proceedings of the National Academy of Sciences. 108 (26): 10585–10590. Bibcode:2011PNAS..10810585H. doi:10.1073/pnas.1105852108. PMC 3127883. PMID 21670299.

Auclair, B. A.; Benoit, Y. D.; Rivard, N.; Mishina, Y.; Perreault, N. (2007). "Bone Morphogenetic Protein Signaling is Essential for Terminal Differentiation of the Intestinal Secretory Cell Lineage". Gastroenterology. 133 (3): 887–896. doi:10.1053/j.gastro.2007.06.066. PMID 17678919.

Amann, J. M.; Chyla, B. J. I.; Ellis, T. C.; Martinez, A.; Moore, A. C.; Franklin, J. L.; McGhee, L.; Meyers, S.; Ohm, J. E.; Luce, K. S.; Ouelette, A. J.; Washington, M. K.; Thompson, M. A.; King, D.; Gautam, S.; Coffey, R. J.; Whitehead, R. H.; Hiebert, S. W. (2005). "Mtgr1 is a Transcriptional Corepressor That is Required for Maintenance of the Secretory Cell Lineage in the Small Intestine". Molecular and Cellular Biology. 25 (21): 9576–9585. doi:10.1128/MCB.25.21.9576-9585.2005. PMC 1265807. PMID 16227606.

Schneider, M. R.; Dahlhoff, M.; Horst, D.; Hirschi, B.; Trülzsch, K.; Müller-Höcker, J.; Vogelmann, R.; Allgäuer, M.; Gerhard, M.; Steininger, S.; Wolf, E.; Kolligs, F. T. (2010). Algül, Hana (ed.). "A Key Role for E-cadherin in Intestinal Homeostasis and Paneth Cell Maturation". PLOS ONE. 5 (12): e14325. Bibcode:2010PLoSO...514325S. doi:10.1371/journal.pone.0014325. PMC 3001873. PMID 21179475.

Park, M. J.; Kim, H. Y.; Kim, K.; Cheong, J. (2009). "Homeodomain transcription factor CDX1 is required for the transcriptional induction of PPARγ in intestinal cell differentiation". FEBS Letters. 583 (1): 29–35. Bibcode:2009FEBSL.583...29P. doi:10.1016/j.febslet.2008.11.030. PMID 19059241. S2CID 21705505.

Soubeyran, P.; André, F.; Lissitzky, J. C.; Mallo, G. V.; Moucadel, V.; Roccabianca, M.; Rechreche, H.; Marvaldi, J.; Dikic, I.; Dagorn, J. C.; Iovanna, J. L. (1999). "Cdx1 promotes differentiation in a rat intestinal epithelial cell line". Gastroenterology. 117 (6): 1326–1338. doi:10.1016/S0016-5085(99)70283-0. PMID 10579974.

Crissey, M. A. S.; Guo, R. J.; Funakoshi, S.; Kong, J.; Liu, J.; Lynch, J. P. (2011). "Cdx2 levels modulate intestinal epithelium maturity and Paneth cell development". Gastroenterology. 140 (2): 517–528.e8. doi:10.1053/j.gastro.2010.11.033. PMC 3031739. PMID 21081128.

Gao, N.; White, P.; Kaestner, K. H. (2009). "Establishment of Intestinal Identity and Epithelial-Mesenchymal Signaling by Cdx2". Developmental Cell. 16 (4): 588–599. doi:10.1016/j.devcel.2009.02.010. PMC 2673200. PMID 19386267.

Suh, E.; Traber, P. G. (1996). "An intestine-specific homeobox gene regulates proliferation and differentiation". Molecular and Cellular Biology. 16 (2): 619–625. doi:10.1128/mcb.16.2.619. PMC 231041. PMID 8552090.

Andreu, P.; Peignon, G. G.; Slomianny, C.; Taketo, M. M.; Colnot, S.; Robine, S.; Lamarque, D.; Laurent-Puig, P.; Perret, C.; Romagnolo, B. A. (2008). "A genetic study of the role of the Wnt/β-catenin signalling in Paneth cell differentiation". Developmental Biology. 324 (2): 288–296. doi:10.1016/j.ydbio.2008.09.027. PMID 18948094.

Fevr, T.; Robine, S.; Louvard, D.; Huelsken, J. (2007). "Wnt/β-Catenin is Essential for Intestinal Homeostasis and Maintenance of Intestinal Stem Cells". Molecular and Cellular Biology. 27 (21): 7551–7559. doi:10.1128/MCB.01034-07. PMC 2169070. PMID 17785439.

Kim, B. M.; Mao, J.; Taketo, M. M.; Shivdasani, R. A. (2007). "Phases of Canonical Wnt Signaling During the Development of Mouse Intestinal Epithelium". Gastroenterology. 133 (2): 529–538. doi:10.1053/j.gastro.2007.04.072. PMID 17681174.

Akiyama, J.; Okamoto, R.; Iwasaki, M.; Zheng, X.; Yui, S.; Tsuchiya, K.; Nakamura, T.; Watanabe, M. (2010). "Delta-like 1 expression promotes goblet cell differentiation in Notch-inactivated human colonic epithelial cells". Biochemical and Biophysical Research Communications. 393 (4): 662–667. doi:10.1016/j.bbrc.2010.02.048. PMID 20170633.

Pellegrinet, L.; Rodilla, V.; Liu, Z.; Chen, S.; Koch, U.; Espinosa, L.; Kaestner, K. H.; Kopan, R.; Lewis, J.; Radtke, F. (2011). "Dll1- and Dll4-mediated Notch signaling is required for homeostasis of intestinal stem cells". Gastroenterology. 140 (4): 1230–1240.e1–7. doi:10.1053/j.gastro.2011.01.005. PMC 3066401. PMID 21238454.

Kwon, M. -C.; Koo, B. -K.; Kim, Y. -Y.; Lee, S. -H.; Kim, N. -S.; Kim, J. -H.; Kong, Y. -Y. (2009). "Essential Role of CR6-interacting Factor 1 (Crif1) in E74-like Factor 3 (ELF3)-mediated Intestinal Development". Journal of Biological Chemistry. 284 (48): 33634–33641. doi:10.1074/jbc.M109.059840. PMC 2785205. PMID 19801644.

Batlle, E.; Henderson, J. T.; Beghtel, H.; Van Den Born, M. M.; Sancho, E.; Huls, G.; Meeldijk, J.; Robertson, J.; Van De Wetering, M.; Pawson, T.; Clevers, H. (2002). "Beta-catenin and TCF mediate cell positioning in the intestinal epithelium by controlling the expression of EphB/ephrinB". Cell. 111 (2): 251–263. doi:10.1016/S0092-8674(02)01015-2. PMID 12408869.

Visco, V.; Bava, F. A.; d'Alessandro, F.; Cavallini, M.; Ziparo, V.; Torrisi, M. R. (2009). "Human colon fibroblasts induce differentiation and proliferation of intestinal epithelial cells through the direct paracrine action of keratinocyte growth factor". Journal of Cellular Physiology. 220 (1): 204–213. doi:10.1002/jcp.21752. PMID 19326389. S2CID 43767607.

Vidrich, A.; Buzan, J. M.; Brodrick, B.; Ilo, C.; Bradley, L.; Fendig, K. S.; Sturgill, T.; Cohn, S. M. (2009). "Fibroblast growth factor receptor-3 regulates Paneth cell lineage allocation and accrual of epithelial stem cells during murine intestinal development". AJP: Gastrointestinal and Liver Physiology. 297 (1): G168–G178. doi:10.1152/ajpgi.90589.2008. PMC 2711760. PMID 19407216.

Ye, D. Z.; Kaestner, K. H. (2009). "Foxa1 and Foxa2 Control the Differentiation of Goblet and Enteroendocrine L- and D-Cells in Mice". Gastroenterology. 137 (6): 2052–2062. doi:10.1053/j.gastro.2009.08.059. PMC 2789913. PMID 19737569.

Van Es, J. H.; Jay, P.; Gregorieff, A.; Van Gijn, M. E.; Jonkheer, S.; Hatzis, P.; Thiele, A.; Van Den Born, M.; Begthel, H.; Brabletz, T.; Taketo, M. M.; Clevers, H. (2005). "Wnt signalling induces maturation of Paneth cells in intestinal crypts". Nature Cell Biology. 7 (4): 381–386. doi:10.1038/ncb1240. PMID 15778706. S2CID 15151752.

Beuling, E.; Baffour-Awuah, N. Y. A.; Stapleton, K. A.; Aronson, B. E.; Noah, T. K.; Shroyer, N. F.; Duncan, S. A.; Fleet, J. C.; Krasinski, S. D. (2011). "GATA Factors Regulate Proliferation, Differentiation, and Gene Expression in Small Intestine of Mature Mice". Gastroenterology. 140 (4): 1219–1229.e1–2. doi:10.1053/j.gastro.2011.01.033. PMC 3541694. PMID 21262227.

Bosse, T.; Piaseckyj, C. M.; Burghard, E.; Fialkovich, J. J.; Rajagopal, S.; Pu, W. T.; Krasinski, S. D. (2006). "Gata4 is Essential for the Maintenance of Jejunal-Ileal Identities in the Adult Mouse Small Intestine". Molecular and Cellular Biology. 26 (23): 9060–9070. doi:10.1128/MCB.00124-06. PMC 1636804. PMID 16940177.

Battle, M. A.; Bondow, B. J.; Iverson, M. A.; Adams, S. J.; Jandacek, R. J.; Tso, P.; Duncan, S. A. (2008). "GATA4 is essential for jejunal function in mice". Gastroenterology. 135 (5): 1676–1686.e1. doi:10.1053/j.gastro.2008.07.074. PMC 2844802. PMID 18812176.

Shroyer, N. F.; Wallis, D.; Venken, K. J.; Bellen, H. J.; Zoghbi, H. Y. (2005). "Gfi1 functions downstream of Math1 to control intestinal secretory cell subtype allocation and differentiation". Genes & Development. 19 (20): 2412–2417. doi:10.1101/gad.1353905. PMC 1257395. PMID 16230531.

Madsen, O. D.; Pedersen, J.; Galante, E. E.; Hald, P.; Heller, J.; Ishibashi, R. S.; Kageyama, M.; Guillemot, R.; Serup, F.; Madsen, P. (2000). "Control of endodermal endocrine development by Hes-1". Nature Genetics. 24 (1): 36–44. doi:10.1038/71657. PMID 10615124. S2CID 52872659.

Benoit, Y. D.; Pare, F.; Francoeur, C.; Jean, D.; Tremblay, E.; Boudreau, F.; Escaffit, F.; Beaulieu, J. -F. (2010). "Cooperation between HNF-1α, Cdx2, and GATA-4 in initiating an enterocytic differentiation program in a normal human intestinal epithelial progenitor cell line". AJP: Gastrointestinal and Liver Physiology. 298 (4): G504–G517. doi:10.1152/ajpgi.00265.2009. PMC 2907224. PMID 20133952.

d'Angelo, A.; Bluteau, O.; Garcia-Gonzalez, M. A.; Gresh, L.; Doyen, A.; Garbay, S.; Robine, S.; Pontoglio, M. (2010). "Hepatocyte nuclear factor 1 and control terminal differentiation and cell fate commitment in the gut epithelium". Development. 137 (9): 1573–1582. doi:10.1242/dev.044420. PMID 20388655.

Van Den Brink, G. R.; Bleuming, S. A.; Hardwick, J. C. H.; Schepman, B. L.; Offerhaus, G. J.; Keller, J. J.; Nielsen, C.; Gaffield, W.; Van Deventer, S. J. H.; Roberts, D. J.; Peppelenbosch, M. P. (2004). "Indian Hedgehog is an antagonist of Wnt signaling in colonic epithelial cell differentiation". Nature Genetics. 36 (3): 277–282. doi:10.1038/ng1304. PMID 14770182.

Ghaleb, A. M.; McConnell, B. B.; Kaestner, K. H.; Yang, V. W. (2011). "Altered Intestinal Epithelial Homeostasis in Mice with Intestine-Specific Deletion of the Krüppel-Like Factor 4 Gene". Developmental Biology. 349 (2): 310–320. doi:10.1016/j.ydbio.2010.11.001. PMC 3022386. PMID 21070761.

Katz, J. P.; Perreault, N.; Goldstein, B. G.; Lee, C. S.; Labosky, P. A.; Yang, V. W.; Kaestner, K. H. (2002). "The zinc-finger transcription factor Klf4 is required for terminal differentiation of goblet cells in the colon". Development. 129 (11): 2619–2628. doi:10.1242/dev.129.11.2619. PMC 2225535. PMID 12015290.

Mustata, RC; Van Loy, T; Lefort, A; Libert, F; Strollo, S; Vassart, G; Garcia, MI (Jun 2011). "Lgr4 is required for Paneth cell differentiation and maintenance of intestinal stem cells ex vivo". EMBO Rep. 12 (6): 558–64. doi:10.1038/embor.2011.52. PMC 3128273. PMID 21508962.

Glinka, A; Dolde, C; Kirsch, N; Huang, YL; Kazanskaya, O; Ingelfinger, D; Boutros, M; Cruciat, CM; Niehrs, C (2011). "LGR4 and LGR5 are R-spondin receptors mediating Wnt/β-catenin and Wnt/PCP signalling". EMBO Rep. 12 (10): 1055–61. doi:10.1038/embor.2011.175. PMC 3185347. PMID 21909076.

Garg, P; Ravi, A; Patel, NR; Roman, J; Gewirtz, AT; Merlin, D; Sitaraman, SV (May 2007). "Matrix metalloproteinase-9 regulates MUC-2 expression through its effect on goblet cell differentiation". Gastroenterology. 132 (5): 1877–89. doi:10.1053/j.gastro.2007.02.048. PMID 17484881.

Murayama, M; Okamoto, R; Tsuchiya, K; Akiyama, J; Nakamura, T; Sakamoto, N; Kanai, T; Watanabe, M (2009). "Musashi-1 suppresses expression of Paneth cell-specific genes in human intestinal epithelial cells". J Gastroenterol. 44 (3): 173–82. doi:10.1007/s00535-008-2284-4. PMID 19214660. S2CID 19858597.

Papetti, M; Augenlicht, LH (Mar 2011). "MYBL2, a link between proliferation and differentiation in maturing colon epithelial cells". J Cell Physiol. 226 (3): 785–91. doi:10.1002/jcp.22399. PMC 3012743. PMID 20857481.

Benoit, YD; Paré, F; Francoeur, C; Jean, D; Tremblay, E; Boudreau, F; Escaffit, F; Beaulieu, JF (2010). "Cooperation between HNF-1alpha, Cdx2, and GATA-4 in initiating an enterocytic differentiation program in a normal human intestinal epithelial progenitor cell line". Am J Physiol Gastrointest Liver Physiol. 298 (4): G504–17. doi:10.1152/ajpgi.00265.2009. PMC 2907224. PMID 20133952.

Muncan, V; Sansom, OJ; Tertoolen, L; Phesse, TJ; Begthel, H; Sancho, E; Cole, AM; Gregorieff, A; de Alboran, IM; Clevers, H; Clarke, AR (Nov 2006). "Rapid loss of intestinal crypts upon conditional deletion of the Wnt/Tcf-4 target gene c-Myc". Mol Cell Biol. 26 (22): 8418–26. doi:10.1128/MCB.00821-06. PMC 1636776. PMID 16954380.

Schonhoff, SE; Giel-Moloney, M; Minireview, Leiter AB. (Jun 2004). "Development and differentiation of gut endocrine cells". Endocrinology. 145 (6): 2639–44. doi:10.1210/en.2004-0051. PMID 15044355.

Riccio, O; van Gijn, ME; Bezdek, AC; Pellegrinet, L; van Es, JH; Zimber-Strobl, U; Strobl, LJ; Honjo, T; Clevers, H; Radtke, F (Apr 2008). "Loss of intestinal crypt progenitor cells owing to inactivation of both Notch1 and Notch2 is accompanied by derepression of CDK inhibitors p27Kip1 and p57Kip2". EMBO Rep. 9 (4): 377–83. doi:10.1038/embor.2008.7. PMC 2288761. PMID 18274550.

Coant, N; Ben Mkaddem, S; Pedruzzi, E; Guichard, C; Tréton, X; Ducroc, R; Freund, JN; Cazals-Hatem, D; Bouhnik, Y; Woerther, PL; Skurnik, D; Grodet, A; Fay, M; Biard, D; Lesuffleur, T; Deffert, C; Moreau, R; Groyer, A; Krause, KH; Daniel, F; Ogier-Denis, E (Jun 2010). "NADPH oxidase 1 modulates WNT and NOTCH1 signaling to control the fate of proliferative progenitor cells in the colon". Mol Cell Biol. 30 (11): 2636–50. doi:10.1128/mcb.01194-09. PMC 2876517. PMID 20351171.

Hill, ME; Asa, SL; Drucker, DJ (Sep 1999). "Essential requirement for Pax6 in control of enteroendocrine proglucagon gene transcription". Mol Endocrinol. 13 (9): 1474–86. doi:10.1210/mend.13.9.0340. PMID 10478839.

Yamada, S; Kojima, H; Fujimiya, M; Nakamura, T; Kashiwagi, A; Kikkawa, R (Jul 2001). "Differentiation of immature enterocytes into enteroendocrine cells by Pdx1 overexpression". Am J Physiol Gastrointest Liver Physiol. 281 (1): G229–36. doi:10.1152/ajpgi.2001.281.1.g229. PMID 11408276. S2CID 8883248.

Chen, C; Fang, R; Davis, C; Maravelias, C; Sibley, E (Dec 2009). "Pdx1 inactivation restricted to the intestinal epithelium in mice alters duodenal gene expression in enterocytes and enteroendocrine cells". Am J Physiol Gastrointest Liver Physiol. 297 (6): G1126–37. doi:10.1152/ajpgi.90586.2008. PMC 2850094. PMID 19808654.

Varnat, F; Heggeler, BB; Grisel, P; Boucard, N; Corthésy-Theulaz, I; Wahli, W; Desvergne, B (Aug 2006). "PPARbeta/delta regulates paneth cell differentiation via controlling the hedgehog signaling pathway". Gastroenterology. 131 (2): 538–53. doi:10.1053/j.gastro.2006.05.004. PMID 16890607.

Haegebarth, A; Bie, W; Yang, R; Crawford, SE; Vasioukhin, V; Fuchs, E; Tyner, AL (Jul 2006). "Protein tyrosine kinase 6 negatively regulates growth and promotes enterocyte differentiation in the small intestine". Mol Cell Biol. 26 (13): 4949–57. doi:10.1128/mcb.01901-05. PMC 1489160. PMID 16782882.

Grün, Dominic; Lyubimova, Anna; Kester, Lennart; Wiebrands, Kay; Basak, Onur; Sasaki, Nobuo; Clevers, Hans; van Oudenaarden, Alexander (2015-09-10). "Single-cell messenger RNA sequencing reveals rare intestinal cell types". Nature. 525 (7568): 251–255. Bibcode:2015Natur.525..251G. doi:10.1038/nature14966. ISSN 1476-4687. PMID 26287467. S2CID 4453971.

Gregorieff, A; Stange, DE; Kujala, P; Begthel, H; van den Born, M; Korving, J; Peters, PJ; Clevers, H (Oct 2009). "The ets-domain transcription factor Spdef promotes maturation of goblet and paneth cells in the intestinal epithelium". Gastroenterology. 137 (4): 1333–45.e1–3. doi:10.1053/j.gastro.2009.06.044. PMID 19549527.

Shorning, BY; Zabkiewicz, J; McCarthy, A; Pearson, HB; Winton, DJ; Sansom, OJ; Ashworth, A; Clarke, AR (2009). "Lkb1 deficiency alters goblet and paneth cell differentiation in the small intestine". PLOS ONE. 4 (1): e4264. Bibcode:2009PLoSO...4.4264S. doi:10.1371/journal.pone.0004264. PMC 2626247. PMID 19165340.

Flentjar, N; Chu, PY; Ng, AY; Johnstone, CN; Heath, JK; Ernst, M; Hertzog, PJ; Pritchard, MA (Apr 2007). "TGF-betaRII rescues development of small intestinal epithelial cells in Elf3-deficient mice". Gastroenterology. 132 (4): 1410–9. doi:10.1053/j.gastro.2007.02.054. PMID 17408644.

harvard.edu

ui.adsabs.harvard.edu

nih.gov

pubmed.ncbi.nlm.nih.gov

ncbi.nlm.nih.gov

semanticscholar.org

api.semanticscholar.org

worldcat.org

search.worldcat.org

List of intestinal epithelial differentiation genes (English Wikipedia)