Pharmacomicrobiomics (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Pharmacomicrobiomics" in English language version.

refsWebsite

Global rank English rank

59nih.gov

4^th place

37doi.org

2^nd place

5harvard.edu

18^th place

17^th place

3semanticscholar.org

11^th place

8^th place

3web.archive.org

1^st place

1gutmicrobiotaforhealth.com

low place

1ucsc.edu

3,619^th place

2,621^st place

1books.google.com

3^rd place

books.google.com

Rowland, I. (2012-12-02). Role of the Gut Flora in Toxicity and Cancer. Elsevier. ISBN 9780323147057. Archived from the original on 2024-07-12. Retrieved 2021-06-15.

doi.org

Rizkallah, M. R.; Saad, R.; Aziz, R. K. (2010). "The Human Microbiome Project, Personalized Medicine and the Birth of Pharmacomicrobiomics". Current Pharmacogenomics and Personalized Medicine. 8 (3): 12. doi:10.2174/187569210792246326.
Ley, R; Turnbaugh, P; Klein, S; Gordon, J (2006). "Microbial ecology: human gut microbes associated with obesity". Nature. 444 (7122): 1022–1023. Bibcode:2006Natur.444.1022L. doi:10.1038/4441022a. PMID 17183309. S2CID 205034045.
Arumugam, M; Raes, J; Pelletier, E; et al. (2013). "Enterotypes of the human gut microbiome". Nature. 473 (7346): 174–180. Bibcode:2011Natur.473..174.. doi:10.1038/nature09944. PMC 3728647. PMID 21508958.
Egert, M; De Graaf, AA; Smidt, H; De Vos, WM; Venema (2006). "Functional microbiomics of the human colon". Trends Microbiol. 14 (2): 86–91. doi:10.1016/j.tim.2005.12.007. PMID 16406528.
Haiser, HJ; Turnbaugh, PJ (2013). "Developing a metagenomic view of xenobiotic metabolism". Pharmacol. Res. 69 (1): 21–31. doi:10.1016/j.phrs.2012.07.009. PMC 3526672. PMID 22902524.
Saad, R; Rizkallah, MR; Aziz, RK (2012). "Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes". Gut Pathog. 4 (1): 16. doi:10.1186/1757-4749-4-16. PMC 3529681. PMID 23194438.
Sousa, T; Paterson, R; Moore, V; Carlsson, A; Abrahamsson, B; Basit, AW (2008). "The gastrointestinal microbiota as a site for the biotransformation of drugs". Int J Pharm. 363 (1–2): 1–25. doi:10.1016/j.ijpharm.2008.07.009. PMID 18682282.
Notes, S (2012). "A framework for human microbiome research". Nature. 486 (7402): 215–221. Bibcode:2012Natur.486..215T. doi:10.1038/nature11209. PMC 3377744. PMID 22699610.
Wilson, ID; Nicholson, JK (2016). "Gut microbiome interactions with drug metabolism, efficacy, and toxicity". Transl. Res. 179: 204–222. doi:10.1016/j.trsl.2016.08.002. PMC 5718288. PMID 27591027.
Lennernäs, H; Abrahamsson, B (2005). "The use of biopharmaceutic classification of drugs in drug discovery and development: current status and future extension". J Pharm Pharmacol. 57 (3): 273–285. doi:10.1211/0022357055263. PMID 15807982. S2CID 45646857.
Baquero, F.; Nombela, C. (1 July 2012). "The microbiome as a human organ". Clinical Microbiology and Infection. 18: 2–4. doi:10.1111/j.1469-0691.2012.03916.x. PMID 22647038.
ElRakaiby, Marwa; Dutilh, Bas E.; Rizkallah, Mariam R.; Boleij, Annemarie; Cole, Jason N.; Aziz, Ramy K. (July 2014). "Pharmacomicrobiomics: The Impact of Human Microbiome Variations on Systems Pharmacology and Personalized Therapeutics". OMICS: A Journal of Integrative Biology. 18 (7): 402–414. doi:10.1089/omi.2014.0018. PMC 4086029. PMID 24785449.
R. Rizkallah, Mariam; Gamal-Eldin, Soha; Saad, Rama; Aziz, Ramy K. (2012). "The PharmacoMicrobiomics Portal: A Database for Drug-Microbiome Interactions". Current Pharmacogenomics and Personalized Medicine. 10 (3): 195–203. doi:10.2174/187569212802510030.
Rumney, CJ; Rowland, IR (1992). "In vivo and in vitro models of the human colonic flora". Crit Rev Food Sci Nutr. 31 (4): 299–331. doi:10.1080/10408399209527575. PMID 1581008.
Marsh, PD (1995). "The role of continuous culture in modelling the human microflora". J Chem Technol Biotechnol. 64 (1): 1–9. doi:10.1002/jctb.280640102.
Janda, JM; Abbott, SL (2007). "16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: Pluses, perils, and pitfalls". J Clin Microbiol. 45 (9): 2761–2764. doi:10.1128/JCM.01228-07. PMC 2045242. PMID 17626177.
Chakravorty, S; Helb, D; Burday, M; Connell, N (2007). "A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria". J Microbiol Methods. 69 (2): 330–339. doi:10.1016/j.mimet.2007.02.005. PMC 2562909. PMID 17391789.
Drancourt, M; Bollet, C; Carlioz, A; Martelin, R; Gayral, JP; Raoult, D (2000). "16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates". J Clin Microbiol. 38 (10): 3623–3630. doi:10.1128/JCM.38.10.3623-3630.2000. PMC 87447. PMID 11015374.
Cole, JR; Wang, Q; Fish, JA; et al. (2014). ""Ribosomal Database Project " Data and tools for high throughput rRNA analysis". Nucleic Acids Res. 42 (D1): D633-42. doi:10.1093/nar/gkt1244. PMC 3965039. PMID 24288368.
Quast, C; Pruesse, E; Yilmaz, P; et al. (2013). ""The SILVA ribosomal RNA gene database project " Improved data processing and web-based tools". Nucleic Acids Res. 41 (D1): D590-6. doi:10.1093/nar/gks1219. PMC 3531112. PMID 23193283.
Sharpton, TJ (2014). "An introduction to the analysis of shotgun metagenomic data". Front Plant Sci. 5: 209. doi:10.3389/fpls.2014.00209. PMC 4059276. PMID 24982662.
Ravel, J; Gajer, P; Abdo, Z; et al. (2011). "Vaginal microbiome of reproductive-age women". Proc Natl Acad Sci. 108 (Suppl 1): 4680–4687. Bibcode:2011PNAS..108.4680R. doi:10.1073/pnas.1002611107. PMC 3063603. PMID 20534435.
Aagaard, K; Ma, J; Antony, KM; Ganu, R; Petrosino, J; Versalovic, J (2014). "The placenta harbors a unique microbiome". Sci Transl Med. 6 (237): 237–65. doi:10.1126/scitranslmed.3008599. PMC 4929217. PMID 24848255.
Zhou, Y; Gao, H; Mihindukulasuriya, KA; et al. (2013). "Biogeography of the ecosystems of the healthy human body". Genome Biol. 14 (1): R1. doi:10.1186/gb-2013-14-1-r1. PMC 4054670. PMID 23316946.
Lloyd-Price, J; Abu-Ali, G; Huttenhower, C (2016). "The healthy human microbiome". Genome Med. 8 (1): 51. doi:10.1186/s13073-016-0307-y. PMC 4848870. PMID 27122046.
Grundmann, O; Yoon, SL (2010). "Irritable bowel syndrome: Epidemiology, diagnosis and treatment: An update for health-care practitioners". J Gastroenterol Hepatol. 25 (4): 691–699. doi:10.1111/j.1440-1746.2009.06120.x. PMID 20074154.
Mathan, VI; Wiederman, J; Dobkin, JF; Lindenbaum, J (1989). "Geographic differences in digoxin inactivation, a metabolic activity of the human anaerobic gut flora". Gut. 30 (7): 971–977. doi:10.1136/gut.30.7.971. PMC 1434295. PMID 2759492.
Clayton, TA; Baker, D; Lindon, JC; Everett, JR; Nicholson, JK (2009). "Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism". Proc Natl Acad Sci U S A. 106 (34): 14728–14733. doi:10.1073/pnas.0904489106. PMC 2731842. PMID 19667173.
Vermes, A; Kuijper, EJ; Guchelaar, HJ; Dankert, J (2003). "An in vitro study on the active conversion of flucytosine to fluorouracil by microorganisms in the human intestinal microflora". Chemotherapy. 49 (1–2): 17–23. doi:10.1159/000069784. PMID 12714804. S2CID 27515058.
Steffens, LS; Nicholson, S; Paul, L V.; Nord, CE; Patrick, S; Abratt, VR. (2010). "Bacteroides fragilis RecA protein overexpression causes resistance to metronidazole". Res Microbiol. 161 (5): 346–354. doi:10.1016/j.resmic.2010.04.003. PMC 3025348. PMID 20435137.
Strong, HA; Renwick, AG; George, CF; Liu, YF; Hill, MJ (1987). "The reduction of sulphinpyrazone and sulindac by intestinal bacteria". Xenobiotica. 17 (6): 685–696. doi:10.3109/00498258709043976. PMID 3630204.
Jernberg, C; Löfmark, S; Edlund, C; Jansson, JK (2010). "Long-term impacts of antibiotic exposure on the human intestinal microbiota". Microbiology. 156 (11): 3216–3223. doi:10.1099/mic.0.040618-0. PMID 20705661.
Zaura, E; Brandt, BW; Joost, M; et al. (2015). ""Same Exposure but Two Radically Different Responses to Antibiotics " Resilience of the Salivary Microbiome versus Long-Term Microbial". mBio. 6 (6): 1–11. doi:10.1128/mBio.01693-15. PMC 4659469. PMID 26556275.
Francino, MP (2016). "Antibiotics and the human gut microbiome: Dysbioses and accumulation of resistances". Front Microbiol. 6: 1543. doi:10.3389/fmicb.2015.01543. PMC 4709861. PMID 26793178.
Aziz, RK; Saad, R; Rizkallah, MR (2011). "PharmacoMicrobiomics or how bugs modulate drugs: an educational initiative to explore the effects of human microbiome on drugs". BMC Bioinformatics. 12 (Suppl 7): A10. doi:10.1186/1471-2105-12-S7-A10. PMC 3194200.
Kostic, AD; Xavier, RJ; Gevers, D (2014). "The microbiome in inflammatory bowel disease: Current status and the future ahead". Gastroenterology. 146 (6): 1489–1499. doi:10.1053/j.gastro.2014.02.009. PMC 4034132. PMID 24560869.
Kong, SW; Collins, CD; Shimizu-motohashi, Y; et al. (2012). "Characteristics and Predictive Value of Blood Transcriptome Signature in Males with Autism Spectrum Disorders". PLOS ONE. 7 (12): e49475. Bibcode:2012PLoSO...749475K. doi:10.1371/journal.pone.0049475. PMC 3515554. PMID 23227143.

gutmicrobiotaforhealth.com

https://commonfund.nih.gov/hmp/overview Archived 2017-03-03 at the Wayback Machine, http://www.gutmicrobiotaforhealth.com/en/metahit/ Archived 2019-12-07 at the Wayback Machine

harvard.edu

ui.adsabs.harvard.edu

Ley, R; Turnbaugh, P; Klein, S; Gordon, J (2006). "Microbial ecology: human gut microbes associated with obesity". Nature. 444 (7122): 1022–1023. Bibcode:2006Natur.444.1022L. doi:10.1038/4441022a. PMID 17183309. S2CID 205034045.
Arumugam, M; Raes, J; Pelletier, E; et al. (2013). "Enterotypes of the human gut microbiome". Nature. 473 (7346): 174–180. Bibcode:2011Natur.473..174.. doi:10.1038/nature09944. PMC 3728647. PMID 21508958.
Notes, S (2012). "A framework for human microbiome research". Nature. 486 (7402): 215–221. Bibcode:2012Natur.486..215T. doi:10.1038/nature11209. PMC 3377744. PMID 22699610.
Ravel, J; Gajer, P; Abdo, Z; et al. (2011). "Vaginal microbiome of reproductive-age women". Proc Natl Acad Sci. 108 (Suppl 1): 4680–4687. Bibcode:2011PNAS..108.4680R. doi:10.1073/pnas.1002611107. PMC 3063603. PMID 20534435.
Kong, SW; Collins, CD; Shimizu-motohashi, Y; et al. (2012). "Characteristics and Predictive Value of Blood Transcriptome Signature in Males with Autism Spectrum Disorders". PLOS ONE. 7 (12): e49475. Bibcode:2012PLoSO...749475K. doi:10.1371/journal.pone.0049475. PMC 3515554. PMID 23227143.

nih.gov

pubmed.ncbi.nlm.nih.gov

Ley, R; Turnbaugh, P; Klein, S; Gordon, J (2006). "Microbial ecology: human gut microbes associated with obesity". Nature. 444 (7122): 1022–1023. Bibcode:2006Natur.444.1022L. doi:10.1038/4441022a. PMID 17183309. S2CID 205034045.
Arumugam, M; Raes, J; Pelletier, E; et al. (2013). "Enterotypes of the human gut microbiome". Nature. 473 (7346): 174–180. Bibcode:2011Natur.473..174.. doi:10.1038/nature09944. PMC 3728647. PMID 21508958.
Egert, M; De Graaf, AA; Smidt, H; De Vos, WM; Venema (2006). "Functional microbiomics of the human colon". Trends Microbiol. 14 (2): 86–91. doi:10.1016/j.tim.2005.12.007. PMID 16406528.
Haiser, HJ; Turnbaugh, PJ (2013). "Developing a metagenomic view of xenobiotic metabolism". Pharmacol. Res. 69 (1): 21–31. doi:10.1016/j.phrs.2012.07.009. PMC 3526672. PMID 22902524.
Saad, R; Rizkallah, MR; Aziz, RK (2012). "Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes". Gut Pathog. 4 (1): 16. doi:10.1186/1757-4749-4-16. PMC 3529681. PMID 23194438.
Sousa, T; Paterson, R; Moore, V; Carlsson, A; Abrahamsson, B; Basit, AW (2008). "The gastrointestinal microbiota as a site for the biotransformation of drugs". Int J Pharm. 363 (1–2): 1–25. doi:10.1016/j.ijpharm.2008.07.009. PMID 18682282.
Notes, S (2012). "A framework for human microbiome research". Nature. 486 (7402): 215–221. Bibcode:2012Natur.486..215T. doi:10.1038/nature11209. PMC 3377744. PMID 22699610.
Scheline, RR (1973). "Metabolism of foreign compounds by gastrointestinal microorganisms". Pharmacol Rev. 25 (4): 451–523. PMID 4587548.
Wilson, ID; Nicholson, JK (2016). "Gut microbiome interactions with drug metabolism, efficacy, and toxicity". Transl. Res. 179: 204–222. doi:10.1016/j.trsl.2016.08.002. PMC 5718288. PMID 27591027.
Lennernäs, H; Abrahamsson, B (2005). "The use of biopharmaceutic classification of drugs in drug discovery and development: current status and future extension". J Pharm Pharmacol. 57 (3): 273–285. doi:10.1211/0022357055263. PMID 15807982. S2CID 45646857.
Baquero, F.; Nombela, C. (1 July 2012). "The microbiome as a human organ". Clinical Microbiology and Infection. 18: 2–4. doi:10.1111/j.1469-0691.2012.03916.x. PMID 22647038.
ElRakaiby, Marwa; Dutilh, Bas E.; Rizkallah, Mariam R.; Boleij, Annemarie; Cole, Jason N.; Aziz, Ramy K. (July 2014). "Pharmacomicrobiomics: The Impact of Human Microbiome Variations on Systems Pharmacology and Personalized Therapeutics". OMICS: A Journal of Integrative Biology. 18 (7): 402–414. doi:10.1089/omi.2014.0018. PMC 4086029. PMID 24785449.
Rumney, CJ; Rowland, IR (1992). "In vivo and in vitro models of the human colonic flora". Crit Rev Food Sci Nutr. 31 (4): 299–331. doi:10.1080/10408399209527575. PMID 1581008.
Janda, JM; Abbott, SL (2007). "16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: Pluses, perils, and pitfalls". J Clin Microbiol. 45 (9): 2761–2764. doi:10.1128/JCM.01228-07. PMC 2045242. PMID 17626177.
Chakravorty, S; Helb, D; Burday, M; Connell, N (2007). "A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria". J Microbiol Methods. 69 (2): 330–339. doi:10.1016/j.mimet.2007.02.005. PMC 2562909. PMID 17391789.
Drancourt, M; Bollet, C; Carlioz, A; Martelin, R; Gayral, JP; Raoult, D (2000). "16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates". J Clin Microbiol. 38 (10): 3623–3630. doi:10.1128/JCM.38.10.3623-3630.2000. PMC 87447. PMID 11015374.
Cole, JR; Wang, Q; Fish, JA; et al. (2014). ""Ribosomal Database Project " Data and tools for high throughput rRNA analysis". Nucleic Acids Res. 42 (D1): D633-42. doi:10.1093/nar/gkt1244. PMC 3965039. PMID 24288368.
Quast, C; Pruesse, E; Yilmaz, P; et al. (2013). ""The SILVA ribosomal RNA gene database project " Improved data processing and web-based tools". Nucleic Acids Res. 41 (D1): D590-6. doi:10.1093/nar/gks1219. PMC 3531112. PMID 23193283.
Sharpton, TJ (2014). "An introduction to the analysis of shotgun metagenomic data". Front Plant Sci. 5: 209. doi:10.3389/fpls.2014.00209. PMC 4059276. PMID 24982662.
Ravel, J; Gajer, P; Abdo, Z; et al. (2011). "Vaginal microbiome of reproductive-age women". Proc Natl Acad Sci. 108 (Suppl 1): 4680–4687. Bibcode:2011PNAS..108.4680R. doi:10.1073/pnas.1002611107. PMC 3063603. PMID 20534435.
Aagaard, K; Ma, J; Antony, KM; Ganu, R; Petrosino, J; Versalovic, J (2014). "The placenta harbors a unique microbiome". Sci Transl Med. 6 (237): 237–65. doi:10.1126/scitranslmed.3008599. PMC 4929217. PMID 24848255.
Zhou, Y; Gao, H; Mihindukulasuriya, KA; et al. (2013). "Biogeography of the ecosystems of the healthy human body". Genome Biol. 14 (1): R1. doi:10.1186/gb-2013-14-1-r1. PMC 4054670. PMID 23316946.
Lloyd-Price, J; Abu-Ali, G; Huttenhower, C (2016). "The healthy human microbiome". Genome Med. 8 (1): 51. doi:10.1186/s13073-016-0307-y. PMC 4848870. PMID 27122046.
Grundmann, O; Yoon, SL (2010). "Irritable bowel syndrome: Epidemiology, diagnosis and treatment: An update for health-care practitioners". J Gastroenterol Hepatol. 25 (4): 691–699. doi:10.1111/j.1440-1746.2009.06120.x. PMID 20074154.
Mathan, VI; Wiederman, J; Dobkin, JF; Lindenbaum, J (1989). "Geographic differences in digoxin inactivation, a metabolic activity of the human anaerobic gut flora". Gut. 30 (7): 971–977. doi:10.1136/gut.30.7.971. PMC 1434295. PMID 2759492.
Clayton, TA; Baker, D; Lindon, JC; Everett, JR; Nicholson, JK (2009). "Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism". Proc Natl Acad Sci U S A. 106 (34): 14728–14733. doi:10.1073/pnas.0904489106. PMC 2731842. PMID 19667173.
Vermes, A; Kuijper, EJ; Guchelaar, HJ; Dankert, J (2003). "An in vitro study on the active conversion of flucytosine to fluorouracil by microorganisms in the human intestinal microflora". Chemotherapy. 49 (1–2): 17–23. doi:10.1159/000069784. PMID 12714804. S2CID 27515058.
Steffens, LS; Nicholson, S; Paul, L V.; Nord, CE; Patrick, S; Abratt, VR. (2010). "Bacteroides fragilis RecA protein overexpression causes resistance to metronidazole". Res Microbiol. 161 (5): 346–354. doi:10.1016/j.resmic.2010.04.003. PMC 3025348. PMID 20435137.
Strong, HA; Renwick, AG; George, CF; Liu, YF; Hill, MJ (1987). "The reduction of sulphinpyrazone and sulindac by intestinal bacteria". Xenobiotica. 17 (6): 685–696. doi:10.3109/00498258709043976. PMID 3630204.
Jernberg, C; Löfmark, S; Edlund, C; Jansson, JK (2010). "Long-term impacts of antibiotic exposure on the human intestinal microbiota". Microbiology. 156 (11): 3216–3223. doi:10.1099/mic.0.040618-0. PMID 20705661.
Zaura, E; Brandt, BW; Joost, M; et al. (2015). ""Same Exposure but Two Radically Different Responses to Antibiotics " Resilience of the Salivary Microbiome versus Long-Term Microbial". mBio. 6 (6): 1–11. doi:10.1128/mBio.01693-15. PMC 4659469. PMID 26556275.
Francino, MP (2016). "Antibiotics and the human gut microbiome: Dysbioses and accumulation of resistances". Front Microbiol. 6: 1543. doi:10.3389/fmicb.2015.01543. PMC 4709861. PMID 26793178.
Kostic, AD; Xavier, RJ; Gevers, D (2014). "The microbiome in inflammatory bowel disease: Current status and the future ahead". Gastroenterology. 146 (6): 1489–1499. doi:10.1053/j.gastro.2014.02.009. PMC 4034132. PMID 24560869.
Kong, SW; Collins, CD; Shimizu-motohashi, Y; et al. (2012). "Characteristics and Predictive Value of Blood Transcriptome Signature in Males with Autism Spectrum Disorders". PLOS ONE. 7 (12): e49475. Bibcode:2012PLoSO...749475K. doi:10.1371/journal.pone.0049475. PMC 3515554. PMID 23227143.

ncbi.nlm.nih.gov

Arumugam, M; Raes, J; Pelletier, E; et al. (2013). "Enterotypes of the human gut microbiome". Nature. 473 (7346): 174–180. Bibcode:2011Natur.473..174.. doi:10.1038/nature09944. PMC 3728647. PMID 21508958.
Haiser, HJ; Turnbaugh, PJ (2013). "Developing a metagenomic view of xenobiotic metabolism". Pharmacol. Res. 69 (1): 21–31. doi:10.1016/j.phrs.2012.07.009. PMC 3526672. PMID 22902524.
Saad, R; Rizkallah, MR; Aziz, RK (2012). "Gut Pharmacomicrobiomics: the tip of an iceberg of complex interactions between drugs and gut-associated microbes". Gut Pathog. 4 (1): 16. doi:10.1186/1757-4749-4-16. PMC 3529681. PMID 23194438.
Notes, S (2012). "A framework for human microbiome research". Nature. 486 (7402): 215–221. Bibcode:2012Natur.486..215T. doi:10.1038/nature11209. PMC 3377744. PMID 22699610.
Wilson, ID; Nicholson, JK (2016). "Gut microbiome interactions with drug metabolism, efficacy, and toxicity". Transl. Res. 179: 204–222. doi:10.1016/j.trsl.2016.08.002. PMC 5718288. PMID 27591027.
ElRakaiby, Marwa; Dutilh, Bas E.; Rizkallah, Mariam R.; Boleij, Annemarie; Cole, Jason N.; Aziz, Ramy K. (July 2014). "Pharmacomicrobiomics: The Impact of Human Microbiome Variations on Systems Pharmacology and Personalized Therapeutics". OMICS: A Journal of Integrative Biology. 18 (7): 402–414. doi:10.1089/omi.2014.0018. PMC 4086029. PMID 24785449.
Janda, JM; Abbott, SL (2007). "16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: Pluses, perils, and pitfalls". J Clin Microbiol. 45 (9): 2761–2764. doi:10.1128/JCM.01228-07. PMC 2045242. PMID 17626177.
Chakravorty, S; Helb, D; Burday, M; Connell, N (2007). "A detailed analysis of 16S ribosomal RNA gene segments for the diagnosis of pathogenic bacteria". J Microbiol Methods. 69 (2): 330–339. doi:10.1016/j.mimet.2007.02.005. PMC 2562909. PMID 17391789.
Drancourt, M; Bollet, C; Carlioz, A; Martelin, R; Gayral, JP; Raoult, D (2000). "16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates". J Clin Microbiol. 38 (10): 3623–3630. doi:10.1128/JCM.38.10.3623-3630.2000. PMC 87447. PMID 11015374.
Cole, JR; Wang, Q; Fish, JA; et al. (2014). ""Ribosomal Database Project " Data and tools for high throughput rRNA analysis". Nucleic Acids Res. 42 (D1): D633-42. doi:10.1093/nar/gkt1244. PMC 3965039. PMID 24288368.
Quast, C; Pruesse, E; Yilmaz, P; et al. (2013). ""The SILVA ribosomal RNA gene database project " Improved data processing and web-based tools". Nucleic Acids Res. 41 (D1): D590-6. doi:10.1093/nar/gks1219. PMC 3531112. PMID 23193283.
Sharpton, TJ (2014). "An introduction to the analysis of shotgun metagenomic data". Front Plant Sci. 5: 209. doi:10.3389/fpls.2014.00209. PMC 4059276. PMID 24982662.
Ravel, J; Gajer, P; Abdo, Z; et al. (2011). "Vaginal microbiome of reproductive-age women". Proc Natl Acad Sci. 108 (Suppl 1): 4680–4687. Bibcode:2011PNAS..108.4680R. doi:10.1073/pnas.1002611107. PMC 3063603. PMID 20534435.
Aagaard, K; Ma, J; Antony, KM; Ganu, R; Petrosino, J; Versalovic, J (2014). "The placenta harbors a unique microbiome". Sci Transl Med. 6 (237): 237–65. doi:10.1126/scitranslmed.3008599. PMC 4929217. PMID 24848255.
Zhou, Y; Gao, H; Mihindukulasuriya, KA; et al. (2013). "Biogeography of the ecosystems of the healthy human body". Genome Biol. 14 (1): R1. doi:10.1186/gb-2013-14-1-r1. PMC 4054670. PMID 23316946.
Lloyd-Price, J; Abu-Ali, G; Huttenhower, C (2016). "The healthy human microbiome". Genome Med. 8 (1): 51. doi:10.1186/s13073-016-0307-y. PMC 4848870. PMID 27122046.
Mathan, VI; Wiederman, J; Dobkin, JF; Lindenbaum, J (1989). "Geographic differences in digoxin inactivation, a metabolic activity of the human anaerobic gut flora". Gut. 30 (7): 971–977. doi:10.1136/gut.30.7.971. PMC 1434295. PMID 2759492.
Clayton, TA; Baker, D; Lindon, JC; Everett, JR; Nicholson, JK (2009). "Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism". Proc Natl Acad Sci U S A. 106 (34): 14728–14733. doi:10.1073/pnas.0904489106. PMC 2731842. PMID 19667173.
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