DNT-nin bağlanma sahəsi (Azerbaijani Wikipedia)

Analysis of information sources in references of the Wikipedia article "DNT-nin bağlanma sahəsi" in Azerbaijani language version.

refsWebsite

Global rank Azerbaijani rank

23nih.gov

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17^th place

22doi.org

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6harvard.edu

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3archive.org

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1physorg.com

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1worldcat.org

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1uq.edu.au

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archive.org

Stormo GD. "DNA binding sites: representation and discovery". Bioinformatics. 16 (1). 2000: 16–23. doi:10.1093/bioinformatics/16.1.16. PMID 10812473.
Gyohda A, Komano T. "Purification and characterization of the R64 shufflon-specific recombinase". Journal of Bacteriology. 182 (10). 2000: 2787–2792. doi:10.1128/JB.182.10.2787-2792.2000. PMC 101987. PMID 10781547.
Birge, E.A. 15: Site Specific Recombination // Bacterial and Bacteriophage Genetics (5th). Springer. 2006. 463–478. ISBN 978-0-387-23919-4.

doi.org

Halford E.S.; Marko J.F. "How do site-specific DNA-binding proteins find their targets?". Nucleic Acids Research. 32 (10). 2004: 3040–3052. doi:10.1093/nar/gkh624. PMC 434431. PMID 15178741.
Borneman, A.R.; Gianoulis, T.A.; Zhang, Z.D.; Yu, H.; Rozowsky, J.; Seringhaus, M.R.; Wang, L.Y.; Gerstein, M.; Snyder, M. "Divergence of transcription factor binding sites across related yeast species". Science. 317 (5839). 2007: 815–819. Bibcode:2007Sci...317..815B. doi:10.1126/science.1140748. PMID 17690298.
Stormo GD. "DNA binding sites: representation and discovery". Bioinformatics. 16 (1). 2000: 16–23. doi:10.1093/bioinformatics/16.1.16. PMID 10812473.
Pingoud A, Jeltsch A. "Recognition and Cleavage of DNA by Type-II Restriction Endonucleases". European Journal of Biochemistry. 246 (1). 1997: 1–22. doi:10.1111/j.1432-1033.1997.t01-6-00001.x. PMID 9210460.
Nash H. A. "Integrative recombination of bacteriophage lambda DNA in vitro". Proceedings of the National Academy of Sciences of the United States of America. 72 (3). 1975: 1072–1076. Bibcode:1975PNAS...72.1072N. doi:10.1073/pnas.72.3.1072. PMC 432468. PMID 1055366.
Gyohda A, Komano T. "Purification and characterization of the R64 shufflon-specific recombinase". Journal of Bacteriology. 182 (10). 2000: 2787–2792. doi:10.1128/JB.182.10.2787-2792.2000. PMC 101987. PMID 10781547.
Campbell A. "Fine Structure Genetics and its Relation to Function". Annual Review of Microbiology. 17 (1). 1963: 2787–2792. doi:10.1146/annurev.mi.17.100163.000405. PMID 14145311.
Gilbert W, Maxam A. "The nucleotide sequence of the lac operator". Proceedings of the National Academy of Sciences of the United States of America. 70 (12). 1973: 3581–3584. Bibcode:1973PNAS...70.3581G. doi:10.1073/pnas.70.12.3581. PMC 427284. PMID 4587255.
Maniatis T, Ptashne M, Barrell BG, Donelson J. "Sequence of a repressor-binding site in the DNA of bacteriophage lambda". Nature. 250 (465). 1974: 394–397. Bibcode:1974Natur.250..394M. doi:10.1038/250394a0. PMID 4854243.
Elnitski L, Jin VX, Farnham PJ, Jones SJ. "Locating mammalian transcription factor binding sites: a survey of computational and experimental techniques". Genome Research. 16 (12). 2006: 1455–1464. doi:10.1101/gr.4140006. PMID 17053094.
Baaske P, Wienken CJ, Reineck P, Duhr S, Braun D. "Optical Thermophoresis quantifies Buffer dependence of Aptamer Binding". Angew. Chem. Int. Ed. 49 (12). Feb 2010: 2238–41. doi:10.1002/anie.200903998. PMID 20186894. Lay summary – Phsyorg.com.
Wienken CJ; və b. "Protein-binding assays in biological liquids using microscale thermophoresis". Nature Communications. 1 (7). 2010: 100. Bibcode:2010NatCo...1..100W. doi:10.1038/ncomms1093. PMID 20981028.
Bulyk M.L.; Johnson P.L.; Church G.M. "Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors". Nucleic Acids Research. 30 (5). 2002: 1255–1261. doi:10.1093/nar/30.5.1255. PMC 101241. PMID 11861919.
Schneider TD, Stormo GD, Gold L, Ehrenfeucht A. "Information content of binding sites on nucleotide sequences". Journal of Molecular Biology. 188 (3). 1986: 415–431X. doi:10.1016/0022-2836(86)90165-8. PMID 3525846.
Ganji, Mahipal; Docter, Margreet; Le Grice, Stuart F. J.; Abbondanzieri, Elio A. "DNA binding proteins explore multiple local configurations during docking via rapid rebinding". Nucleic Acids Research. 44 (17). 2016-09-30: 8376–8384. doi:10.1093/nar/gkw666. ISSN 0305-1048. PMC 5041478. PMID 27471033.
Erill I; O'Neill MC. "A reexamination of information theory-based methods for DNA-binding site identification". BMC Bioinformatics. 10 (1). 2009: 57. doi:10.1186/1471-2105-10-57. PMC 2680408. PMID 19210776.
O'Neill M.C. "Training back-propagation neural networks to define and detect DNA-binding sites". Nucleic Acids Research. 19 (2). 1991: 133–318. doi:10.1093/nar/19.2.313. PMC 333596. PMID 2014171.
Bailey T.L. Discovering sequence motifs // Bioinformatics (PDF). Methods in Molecular Biology. Methods in Molecular Biology™. 452. 2008. 231–251. doi:10.1007/978-1-60327-159-2_12. ISBN 978-1-58829-707-5. PMID 18566768.
Bailey T.L. "Discovering novel sequence motifs with MEME". Current Protocols in Bioinformatics. 2 (4). 2002: 2.4.1–2.4.35. doi:10.1002/0471250953.bi0204s00. PMID 18792935.
Das MK, Dai HK. "A survey of DNA motif finding algorithms". BMC Bioinformatics. 8 (Suppl 7). 2007: S21. doi:10.1186/1471-2105-8-S7-S21. PMC 2099490. PMID 18047721.
Siddharthan R, Siggia ED, van Nimwegen E. "PhyloGibbs: A Gibbs sampling motif finder that incorporates phylogeny". PLOS Comput Biol. 1 (7). 2005: e67. Bibcode:2005PLSCB...1...67S. doi:10.1371/journal.pcbi.0010067. PMC 1309704. PMID 16477324.
Salama RA, Stekel DJ. "Inclusion of neighboring base interdependencies substantially improves genome-wide prokaryotic transcription factor binding site prediction". Nucleic Acids Research. 38 (12). 2010: e135. doi:10.1093/nar/gkq274. PMC 2896541. PMID 20439311.

harvard.edu

ui.adsabs.harvard.edu

Borneman, A.R.; Gianoulis, T.A.; Zhang, Z.D.; Yu, H.; Rozowsky, J.; Seringhaus, M.R.; Wang, L.Y.; Gerstein, M.; Snyder, M. "Divergence of transcription factor binding sites across related yeast species". Science. 317 (5839). 2007: 815–819. Bibcode:2007Sci...317..815B. doi:10.1126/science.1140748. PMID 17690298.
Nash H. A. "Integrative recombination of bacteriophage lambda DNA in vitro". Proceedings of the National Academy of Sciences of the United States of America. 72 (3). 1975: 1072–1076. Bibcode:1975PNAS...72.1072N. doi:10.1073/pnas.72.3.1072. PMC 432468. PMID 1055366.
Gilbert W, Maxam A. "The nucleotide sequence of the lac operator". Proceedings of the National Academy of Sciences of the United States of America. 70 (12). 1973: 3581–3584. Bibcode:1973PNAS...70.3581G. doi:10.1073/pnas.70.12.3581. PMC 427284. PMID 4587255.
Maniatis T, Ptashne M, Barrell BG, Donelson J. "Sequence of a repressor-binding site in the DNA of bacteriophage lambda". Nature. 250 (465). 1974: 394–397. Bibcode:1974Natur.250..394M. doi:10.1038/250394a0. PMID 4854243.
Wienken CJ; və b. "Protein-binding assays in biological liquids using microscale thermophoresis". Nature Communications. 1 (7). 2010: 100. Bibcode:2010NatCo...1..100W. doi:10.1038/ncomms1093. PMID 20981028.
Siddharthan R, Siggia ED, van Nimwegen E. "PhyloGibbs: A Gibbs sampling motif finder that incorporates phylogeny". PLOS Comput Biol. 1 (7). 2005: e67. Bibcode:2005PLSCB...1...67S. doi:10.1371/journal.pcbi.0010067. PMC 1309704. PMID 16477324.

nih.gov

ncbi.nlm.nih.gov

Halford E.S.; Marko J.F. "How do site-specific DNA-binding proteins find their targets?". Nucleic Acids Research. 32 (10). 2004: 3040–3052. doi:10.1093/nar/gkh624. PMC 434431. PMID 15178741.
Borneman, A.R.; Gianoulis, T.A.; Zhang, Z.D.; Yu, H.; Rozowsky, J.; Seringhaus, M.R.; Wang, L.Y.; Gerstein, M.; Snyder, M. "Divergence of transcription factor binding sites across related yeast species". Science. 317 (5839). 2007: 815–819. Bibcode:2007Sci...317..815B. doi:10.1126/science.1140748. PMID 17690298.
Stormo GD. "DNA binding sites: representation and discovery". Bioinformatics. 16 (1). 2000: 16–23. doi:10.1093/bioinformatics/16.1.16. PMID 10812473.
Pingoud A, Jeltsch A. "Recognition and Cleavage of DNA by Type-II Restriction Endonucleases". European Journal of Biochemistry. 246 (1). 1997: 1–22. doi:10.1111/j.1432-1033.1997.t01-6-00001.x. PMID 9210460.
Nash H. A. "Integrative recombination of bacteriophage lambda DNA in vitro". Proceedings of the National Academy of Sciences of the United States of America. 72 (3). 1975: 1072–1076. Bibcode:1975PNAS...72.1072N. doi:10.1073/pnas.72.3.1072. PMC 432468. PMID 1055366.
Gyohda A, Komano T. "Purification and characterization of the R64 shufflon-specific recombinase". Journal of Bacteriology. 182 (10). 2000: 2787–2792. doi:10.1128/JB.182.10.2787-2792.2000. PMC 101987. PMID 10781547.
Campbell A. "Fine Structure Genetics and its Relation to Function". Annual Review of Microbiology. 17 (1). 1963: 2787–2792. doi:10.1146/annurev.mi.17.100163.000405. PMID 14145311.
Gilbert W, Maxam A. "The nucleotide sequence of the lac operator". Proceedings of the National Academy of Sciences of the United States of America. 70 (12). 1973: 3581–3584. Bibcode:1973PNAS...70.3581G. doi:10.1073/pnas.70.12.3581. PMC 427284. PMID 4587255.
Maniatis T, Ptashne M, Barrell BG, Donelson J. "Sequence of a repressor-binding site in the DNA of bacteriophage lambda". Nature. 250 (465). 1974: 394–397. Bibcode:1974Natur.250..394M. doi:10.1038/250394a0. PMID 4854243.
Elnitski L, Jin VX, Farnham PJ, Jones SJ. "Locating mammalian transcription factor binding sites: a survey of computational and experimental techniques". Genome Research. 16 (12). 2006: 1455–1464. doi:10.1101/gr.4140006. PMID 17053094.
Baaske P, Wienken CJ, Reineck P, Duhr S, Braun D. "Optical Thermophoresis quantifies Buffer dependence of Aptamer Binding". Angew. Chem. Int. Ed. 49 (12). Feb 2010: 2238–41. doi:10.1002/anie.200903998. PMID 20186894. Lay summary – Phsyorg.com.
Wienken CJ; və b. "Protein-binding assays in biological liquids using microscale thermophoresis". Nature Communications. 1 (7). 2010: 100. Bibcode:2010NatCo...1..100W. doi:10.1038/ncomms1093. PMID 20981028.
Schneider T.D. "Consensus sequence Zen". Applied Bioinformatics. 1 (3). 2002: 111–119. PMC 1852464. PMID 15130839.
Bulyk M.L.; Johnson P.L.; Church G.M. "Nucleotides of transcription factor binding sites exert interdependent effects on the binding affinities of transcription factors". Nucleic Acids Research. 30 (5). 2002: 1255–1261. doi:10.1093/nar/30.5.1255. PMC 101241. PMID 11861919.
Schneider TD, Stormo GD, Gold L, Ehrenfeucht A. "Information content of binding sites on nucleotide sequences". Journal of Molecular Biology. 188 (3). 1986: 415–431X. doi:10.1016/0022-2836(86)90165-8. PMID 3525846.
Ganji, Mahipal; Docter, Margreet; Le Grice, Stuart F. J.; Abbondanzieri, Elio A. "DNA binding proteins explore multiple local configurations during docking via rapid rebinding". Nucleic Acids Research. 44 (17). 2016-09-30: 8376–8384. doi:10.1093/nar/gkw666. ISSN 0305-1048. PMC 5041478. PMID 27471033.
Erill I; O'Neill MC. "A reexamination of information theory-based methods for DNA-binding site identification". BMC Bioinformatics. 10 (1). 2009: 57. doi:10.1186/1471-2105-10-57. PMC 2680408. PMID 19210776.
O'Neill M.C. "Training back-propagation neural networks to define and detect DNA-binding sites". Nucleic Acids Research. 19 (2). 1991: 133–318. doi:10.1093/nar/19.2.313. PMC 333596. PMID 2014171.
Bailey T.L. Discovering sequence motifs // Bioinformatics (PDF). Methods in Molecular Biology. Methods in Molecular Biology™. 452. 2008. 231–251. doi:10.1007/978-1-60327-159-2_12. ISBN 978-1-58829-707-5. PMID 18566768.
Bailey T.L. "Discovering novel sequence motifs with MEME". Current Protocols in Bioinformatics. 2 (4). 2002: 2.4.1–2.4.35. doi:10.1002/0471250953.bi0204s00. PMID 18792935.
Das MK, Dai HK. "A survey of DNA motif finding algorithms". BMC Bioinformatics. 8 (Suppl 7). 2007: S21. doi:10.1186/1471-2105-8-S7-S21. PMC 2099490. PMID 18047721.
Siddharthan R, Siggia ED, van Nimwegen E. "PhyloGibbs: A Gibbs sampling motif finder that incorporates phylogeny". PLOS Comput Biol. 1 (7). 2005: e67. Bibcode:2005PLSCB...1...67S. doi:10.1371/journal.pcbi.0010067. PMC 1309704. PMID 16477324.
Salama RA, Stekel DJ. "Inclusion of neighboring base interdependencies substantially improves genome-wide prokaryotic transcription factor binding site prediction". Nucleic Acids Research. 38 (12). 2010: e135. doi:10.1093/nar/gkq274. PMC 2896541. PMID 20439311.

physorg.com

Baaske P, Wienken CJ, Reineck P, Duhr S, Braun D. "Optical Thermophoresis quantifies Buffer dependence of Aptamer Binding". Angew. Chem. Int. Ed. 49 (12). Feb 2010: 2238–41. doi:10.1002/anie.200903998. PMID 20186894. Lay summary – Phsyorg.com.

uq.edu.au

espace.library.uq.edu.au

Bailey T.L. Discovering sequence motifs // Bioinformatics (PDF). Methods in Molecular Biology. Methods in Molecular Biology™. 452. 2008. 231–251. doi:10.1007/978-1-60327-159-2_12. ISBN 978-1-58829-707-5. PMID 18566768.

worldcat.org

Ganji, Mahipal; Docter, Margreet; Le Grice, Stuart F. J.; Abbondanzieri, Elio A. "DNA binding proteins explore multiple local configurations during docking via rapid rebinding". Nucleic Acids Research. 44 (17). 2016-09-30: 8376–8384. doi:10.1093/nar/gkw666. ISSN 0305-1048. PMC 5041478. PMID 27471033.