SCHOUTEN, Stefan; HOPMANS, Ellen C.; BAAS, Marianne. Intact Membrane Lipids of “ Candidatus Nitrosopumilus maritimus,” a Cultivated Representative of the Cosmopolitan Mesophilic Group I Crenarchaeota. Applied and Environmental Microbiology. 2008-04-15, roč. 74, čís. 8, s. 2433–2440. Dostupné online [cit. 2023-12-05]. ISSN0099-2240. DOI10.1128/AEM.01709-07. PMID18296531. (anglicky)
doi.org
dx.doi.org
WHITMAN, William B.; OREN, Aharon; CHUVOCHINA, Maria. Proposal of the suffix –ota to denote phyla. Addendum to ‘Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes’. International Journal of Systematic and Evolutionary Microbiology. 2018, roč. 68, čís. 3, s. 967–969. Dostupné online [cit. 2023-11-28]. ISSN1466-5034. DOI10.1099/ijsem.0.002593.
OREN, Aharon; GARRITY, George M. Valid publication of the names of forty-two phyla of prokaryotes. International Journal of Systematic and Evolutionary Microbiology. 2021, roč. 71, čís. 10, s. 005056. Dostupné online [cit. 2023-11-19]. ISSN1466-5034. DOI10.1099/ijsem.0.005056.
BROCHIER-ARMANET, Céline; BOUSSAU, Bastien; GRIBALDO, Simonetta. Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nature Reviews Microbiology. 2008-03, roč. 6, čís. 3, s. 245–252. Dostupné online [cit. 2023-11-19]. ISSN1740-1534. DOI10.1038/nrmicro1852. (anglicky)
SPANG, Anja; HATZENPICHLER, Roland; BROCHIER-ARMANET, Céline. Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends in Microbiology. 2010-08, roč. 18, čís. 8, s. 331–340. PMID: 20598889. Dostupné online [cit. 2023-11-19]. ISSN1878-4380. DOI10.1016/j.tim.2010.06.003. PMID20598889.
YIN, Zhixuan; BI, Xuejun; XU, Chenlu. Ammonia-Oxidizing Archaea (AOA) Play with Ammonia-Oxidizing Bacteria (AOB) in Nitrogen Removal from Wastewater. Archaea. 2018-09-13, roč. 2018, s. 8429145. PMID: 30302054
PMCID: PMC6158934. Dostupné online [cit. 2023-12-07]. ISSN1472-3646. DOI10.1155/2018/8429145. PMID30302054.
DAMSTÉ, Jaap S. Sinninghe; SCHOUTEN, Stefan; HOPMANS, Ellen C. Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. Journal of Lipid Research. 2002-10, roč. 43, čís. 10, s. 1641–1651. PMID: 12364548. Dostupné online [cit. 2023-11-30]. ISSN0022-2275. DOI10.1194/jlr.m200148-jlr200. PMID12364548.
KÖNNEKE, Martin; BERNHARD, Anne E.; DE LA TORRE, José R. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature. 2005-09, roč. 437, čís. 7058, s. 543–546. Dostupné online [cit. 2023-12-03]. ISSN1476-4687. DOI10.1038/nature03911. (anglicky)
SCHOUTEN, Stefan; HOPMANS, Ellen C.; BAAS, Marianne. Intact Membrane Lipids of “ Candidatus Nitrosopumilus maritimus,” a Cultivated Representative of the Cosmopolitan Mesophilic Group I Crenarchaeota. Applied and Environmental Microbiology. 2008-04-15, roč. 74, čís. 8, s. 2433–2440. Dostupné online [cit. 2023-12-05]. ISSN0099-2240. DOI10.1128/AEM.01709-07. PMID18296531. (anglicky)
MOSIER, Annika C.; LUND, Marie B.; FRANCIS, Christopher A. Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats. Microbial Ecology. 2012-11, roč. 64, čís. 4, s. 955–963. PMID: 22644483. Dostupné online [cit. 2023-12-03]. ISSN1432-184X. DOI10.1007/s00248-012-0075-1. PMID22644483.
PESTER, Michael; SCHLEPER, Christa; WAGNER, Michael. The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Current Opinion in Microbiology. 2011-6, roč. 14, čís. 3, s. 300–306. PMID: 21546306
PMCID: PMC3126993. Dostupné online [cit. 2023-11-19]. ISSN1369-5274. DOI10.1016/j.mib.2011.04.007. PMID21546306.
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.0913533107. PMID20421470.
KEROU, Melina; PONCE-TOLEDO, Rafael I.; ZHAO, Rui. Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages. The ISME Journal. 2021-09, roč. 15, čís. 9, s. 2792–2808. Dostupné online [cit. 2023-11-30]. ISSN1751-7370. DOI10.1038/s41396-021-00962-6. (anglicky)
DOXEY, Andrew C.; KURTZ, Daniel A.; LYNCH, Michael DJ. Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production. The ISME Journal. 2015-02, roč. 9, čís. 2, s. 461–471. Dostupné online [cit. 2023-11-19]. ISSN1751-7370. DOI10.1038/ismej.2014.142. (anglicky)
TOURNA, Maria; STIEGLMEIER, Michaela; SPANG, Anja. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences of the United States of America. 2011-05-17, roč. 108, čís. 20, s. 8420–8425. PMID: 21525411
PMCID: PMC3100973. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.1013488108. PMID21525411.
LIMPIYAKORN, Tawan; FÜRHACKER, Maria; HABERL, Raimund. amoA-encoding archaea in wastewater treatment plants: a review. Applied Microbiology and Biotechnology. 2013-02-01, roč. 97, čís. 4, s. 1425–1439. Dostupné online [cit. 2023-11-30]. ISSN1432-0614. DOI10.1007/s00253-012-4650-7. (anglicky)
MULLER, Félix; BRISSAC, Terry; LE BRIS, Nadine. First description of giant Archaea ( Thaumarchaeota ) associated with putative bacterial ectosymbionts in a sulfidic marine habitat. Environmental Microbiology. 2010-08, roč. 12, čís. 8, s. 2371–2383. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2010.02309.x. (anglicky)
DE LA TORRE, José R.; WALKER, Christopher B.; INGALLS, Anitra E. Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol. Environmental Microbiology. 2008-03, roč. 10, čís. 3, s. 810–818. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2007.01506.x. (anglicky)
STIEGLMEIER, Michaela; ALVES, Ricardo J. E.; SCHLEPER, Christa. The Phylum Thaumarchaeota. Příprava vydání Eugene Rosenberg, Edward F. DeLong, Stephen Lory, Erko Stackebrandt, Fabiano Thompson. Berlin, Heidelberg: Springer Dostupné online. ISBN978-3-642-38954-2. DOI10.1007/978-3-642-38954-2_338. S. 347–362. (anglicky) DOI: 10.1007/978-3-642-38954-2_338.
HATZENPICHLER, Roland; LEBEDEVA, Elena V.; SPIECK, Eva. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. Proceedings of the National Academy of Sciences of the United States of America. 2008-02-12, roč. 105, čís. 6, s. 2134–2139. PMID: 18250313
PMCID: PMC2538889. Dostupné online [cit. 2023-12-03]. ISSN1091-6490. DOI10.1073/pnas.0708857105. PMID18250313.
URAKAWA, Hidetoshi; MARTENS-HABBENA, Willm; STAHL, David A. Physiology and Genomics of Ammonia-Oxidizing Archaea. Příprava vydání Bess B. Ward, Daniel J. Arp, Martin G. Klotz. Washington, DC, USA: ASM Press Dostupné online. ISBN978-1-68367-116-9, ISBN978-1-55581-714-5. DOI10.1128/9781555817145.ch6. S. 115–155. (anglicky) DOI: 10.1128/9781555817145.ch6.
BROCHIER-ARMANET, Céline; GRIBALDO, Simonetta; FORTERRE, Patrick. A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya. Biology Direct. 2008-12-23, roč. 3, s. 54. PMID: 19105819
PMCID: PMC2621148. Dostupné online [cit. 2023-12-05]. ISSN1745-6150. DOI10.1186/1745-6150-3-54. PMID19105819.
SPANG, Anja; POEHLEIN, Anja; OFFRE, Pierre. The genome of the ammonia‐oxidizing C andidatus N itrososphaera gargensis: insights into metabolic versatility and environmental adaptations. Environmental Microbiology. 2012-12, roč. 14, čís. 12, s. 3122–3145. Dostupné online [cit. 2023-12-05]. ISSN1462-2912. DOI10.1111/j.1462-2920.2012.02893.x. (anglicky)
MARTENS-HABBENA, Willm; BERUBE, Paul M.; URAKAWA, Hidetoshi. Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature. 2009-10, roč. 461, čís. 7266, s. 976–979. Dostupné online [cit. 2023-11-28]. ISSN1476-4687. DOI10.1038/nature08465. (anglicky)
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-28]. ISSN0027-8424. DOI10.1073/pnas.0913533107. PMID20421470.
BERG, Ivan A.; KOCKELKORN, Daniel; BUCKEL, Wolfgang. A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea. Science (New York, N.Y.). 2007-12-14, roč. 318, čís. 5857, s. 1782–1786. PMID: 18079405. Dostupné online [cit. 2023-11-28]. ISSN1095-9203. DOI10.1126/science.1149976. PMID18079405.
doi.org
LIMPIYAKORN, Tawan; FÜRHACKER, Maria; HABERL, Raimund. amoA-encoding archaea in wastewater treatment plants: a review. Applied Microbiology and Biotechnology. 2013-02-01, roč. 97, čís. 4, s. 1425–1439. Dostupné online [cit. 2023-11-30]. ISSN1432-0614. DOI10.1007/s00253-012-4650-7. (anglicky)
STIEGLMEIER, Michaela; ALVES, Ricardo J. E.; SCHLEPER, Christa. The Phylum Thaumarchaeota. Příprava vydání Eugene Rosenberg, Edward F. DeLong, Stephen Lory, Erko Stackebrandt, Fabiano Thompson. Berlin, Heidelberg: Springer Dostupné online. ISBN978-3-642-38954-2. DOI10.1007/978-3-642-38954-2_338. S. 347–362. (anglicky) DOI: 10.1007/978-3-642-38954-2_338.
microbiologyresearch.org
WHITMAN, William B.; OREN, Aharon; CHUVOCHINA, Maria. Proposal of the suffix –ota to denote phyla. Addendum to ‘Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes’. International Journal of Systematic and Evolutionary Microbiology. 2018, roč. 68, čís. 3, s. 967–969. Dostupné online [cit. 2023-11-28]. ISSN1466-5034. DOI10.1099/ijsem.0.002593.
OREN, Aharon; GARRITY, George M. Valid publication of the names of forty-two phyla of prokaryotes. International Journal of Systematic and Evolutionary Microbiology. 2021, roč. 71, čís. 10, s. 005056. Dostupné online [cit. 2023-11-19]. ISSN1466-5034. DOI10.1099/ijsem.0.005056.
nature.com
BROCHIER-ARMANET, Céline; BOUSSAU, Bastien; GRIBALDO, Simonetta. Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nature Reviews Microbiology. 2008-03, roč. 6, čís. 3, s. 245–252. Dostupné online [cit. 2023-11-19]. ISSN1740-1534. DOI10.1038/nrmicro1852. (anglicky)
KÖNNEKE, Martin; BERNHARD, Anne E.; DE LA TORRE, José R. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature. 2005-09, roč. 437, čís. 7058, s. 543–546. Dostupné online [cit. 2023-12-03]. ISSN1476-4687. DOI10.1038/nature03911. (anglicky)
KEROU, Melina; PONCE-TOLEDO, Rafael I.; ZHAO, Rui. Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages. The ISME Journal. 2021-09, roč. 15, čís. 9, s. 2792–2808. Dostupné online [cit. 2023-11-30]. ISSN1751-7370. DOI10.1038/s41396-021-00962-6. (anglicky)
DOXEY, Andrew C.; KURTZ, Daniel A.; LYNCH, Michael DJ. Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production. The ISME Journal. 2015-02, roč. 9, čís. 2, s. 461–471. Dostupné online [cit. 2023-11-19]. ISSN1751-7370. DOI10.1038/ismej.2014.142. (anglicky)
MARTENS-HABBENA, Willm; BERUBE, Paul M.; URAKAWA, Hidetoshi. Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature. 2009-10, roč. 461, čís. 7266, s. 976–979. Dostupné online [cit. 2023-11-28]. ISSN1476-4687. DOI10.1038/nature08465. (anglicky)
nih.gov
ncbi.nlm.nih.gov
SPANG, Anja; HATZENPICHLER, Roland; BROCHIER-ARMANET, Céline. Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends in Microbiology. 2010-08, roč. 18, čís. 8, s. 331–340. PMID: 20598889. Dostupné online [cit. 2023-11-19]. ISSN1878-4380. DOI10.1016/j.tim.2010.06.003. PMID20598889.
YIN, Zhixuan; BI, Xuejun; XU, Chenlu. Ammonia-Oxidizing Archaea (AOA) Play with Ammonia-Oxidizing Bacteria (AOB) in Nitrogen Removal from Wastewater. Archaea. 2018-09-13, roč. 2018, s. 8429145. PMID: 30302054
PMCID: PMC6158934. Dostupné online [cit. 2023-12-07]. ISSN1472-3646. DOI10.1155/2018/8429145. PMID30302054.
DAMSTÉ, Jaap S. Sinninghe; SCHOUTEN, Stefan; HOPMANS, Ellen C. Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. Journal of Lipid Research. 2002-10, roč. 43, čís. 10, s. 1641–1651. PMID: 12364548. Dostupné online [cit. 2023-11-30]. ISSN0022-2275. DOI10.1194/jlr.m200148-jlr200. PMID12364548.
SCHOUTEN, Stefan; HOPMANS, Ellen C.; BAAS, Marianne. Intact Membrane Lipids of “ Candidatus Nitrosopumilus maritimus,” a Cultivated Representative of the Cosmopolitan Mesophilic Group I Crenarchaeota. Applied and Environmental Microbiology. 2008-04-15, roč. 74, čís. 8, s. 2433–2440. Dostupné online [cit. 2023-12-05]. ISSN0099-2240. DOI10.1128/AEM.01709-07. PMID18296531. (anglicky)
MOSIER, Annika C.; LUND, Marie B.; FRANCIS, Christopher A. Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats. Microbial Ecology. 2012-11, roč. 64, čís. 4, s. 955–963. PMID: 22644483. Dostupné online [cit. 2023-12-03]. ISSN1432-184X. DOI10.1007/s00248-012-0075-1. PMID22644483.
PESTER, Michael; SCHLEPER, Christa; WAGNER, Michael. The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Current Opinion in Microbiology. 2011-6, roč. 14, čís. 3, s. 300–306. PMID: 21546306
PMCID: PMC3126993. Dostupné online [cit. 2023-11-19]. ISSN1369-5274. DOI10.1016/j.mib.2011.04.007. PMID21546306.
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.0913533107. PMID20421470.
PRESTON, C M; WU, K Y; MOLINSKI, T F. A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov.. Proceedings of the National Academy of Sciences of the United States of America. 1996-06-25, roč. 93, čís. 13, s. 6241–6246. PMID: 8692799
PMCID: PMC39006. Dostupné online [cit. 2023-11-30]. ISSN0027-8424. PMID8692799.
TOURNA, Maria; STIEGLMEIER, Michaela; SPANG, Anja. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences of the United States of America. 2011-05-17, roč. 108, čís. 20, s. 8420–8425. PMID: 21525411
PMCID: PMC3100973. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.1013488108. PMID21525411.
HATZENPICHLER, Roland; LEBEDEVA, Elena V.; SPIECK, Eva. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. Proceedings of the National Academy of Sciences of the United States of America. 2008-02-12, roč. 105, čís. 6, s. 2134–2139. PMID: 18250313
PMCID: PMC2538889. Dostupné online [cit. 2023-12-03]. ISSN1091-6490. DOI10.1073/pnas.0708857105. PMID18250313.
BROCHIER-ARMANET, Céline; GRIBALDO, Simonetta; FORTERRE, Patrick. A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya. Biology Direct. 2008-12-23, roč. 3, s. 54. PMID: 19105819
PMCID: PMC2621148. Dostupné online [cit. 2023-12-05]. ISSN1745-6150. DOI10.1186/1745-6150-3-54. PMID19105819.
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-28]. ISSN0027-8424. DOI10.1073/pnas.0913533107. PMID20421470.
BERG, Ivan A.; KOCKELKORN, Daniel; BUCKEL, Wolfgang. A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea. Science (New York, N.Y.). 2007-12-14, roč. 318, čís. 5857, s. 1782–1786. PMID: 18079405. Dostupné online [cit. 2023-11-28]. ISSN1095-9203. DOI10.1126/science.1149976. PMID18079405.
pubmed.ncbi.nlm.nih.gov
SPANG, Anja; HATZENPICHLER, Roland; BROCHIER-ARMANET, Céline. Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends in Microbiology. 2010-08, roč. 18, čís. 8, s. 331–340. PMID: 20598889. Dostupné online [cit. 2023-11-19]. ISSN1878-4380. DOI10.1016/j.tim.2010.06.003. PMID20598889.
DAMSTÉ, Jaap S. Sinninghe; SCHOUTEN, Stefan; HOPMANS, Ellen C. Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. Journal of Lipid Research. 2002-10, roč. 43, čís. 10, s. 1641–1651. PMID: 12364548. Dostupné online [cit. 2023-11-30]. ISSN0022-2275. DOI10.1194/jlr.m200148-jlr200. PMID12364548.
MOSIER, Annika C.; LUND, Marie B.; FRANCIS, Christopher A. Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats. Microbial Ecology. 2012-11, roč. 64, čís. 4, s. 955–963. PMID: 22644483. Dostupné online [cit. 2023-12-03]. ISSN1432-184X. DOI10.1007/s00248-012-0075-1. PMID22644483.
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.0913533107. PMID20421470.
TOURNA, Maria; STIEGLMEIER, Michaela; SPANG, Anja. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences of the United States of America. 2011-05-17, roč. 108, čís. 20, s. 8420–8425. PMID: 21525411
PMCID: PMC3100973. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.1013488108. PMID21525411.
HATZENPICHLER, Roland; LEBEDEVA, Elena V.; SPIECK, Eva. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. Proceedings of the National Academy of Sciences of the United States of America. 2008-02-12, roč. 105, čís. 6, s. 2134–2139. PMID: 18250313
PMCID: PMC2538889. Dostupné online [cit. 2023-12-03]. ISSN1091-6490. DOI10.1073/pnas.0708857105. PMID18250313.
BERG, Ivan A.; KOCKELKORN, Daniel; BUCKEL, Wolfgang. A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea. Science (New York, N.Y.). 2007-12-14, roč. 318, čís. 5857, s. 1782–1786. PMID: 18079405. Dostupné online [cit. 2023-11-28]. ISSN1095-9203. DOI10.1126/science.1149976. PMID18079405.
ScienceDirect.com | Science, health and medical journals, full text articles and books.. www.sciencedirect.com [online]. [cit. 2023-11-30]. Dostupné online.
wiley.com
sfamjournals.onlinelibrary.wiley.com
MULLER, Félix; BRISSAC, Terry; LE BRIS, Nadine. First description of giant Archaea ( Thaumarchaeota ) associated with putative bacterial ectosymbionts in a sulfidic marine habitat. Environmental Microbiology. 2010-08, roč. 12, čís. 8, s. 2371–2383. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2010.02309.x. (anglicky)
DE LA TORRE, José R.; WALKER, Christopher B.; INGALLS, Anitra E. Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol. Environmental Microbiology. 2008-03, roč. 10, čís. 3, s. 810–818. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2007.01506.x. (anglicky)
SPANG, Anja; POEHLEIN, Anja; OFFRE, Pierre. The genome of the ammonia‐oxidizing C andidatus N itrososphaera gargensis: insights into metabolic versatility and environmental adaptations. Environmental Microbiology. 2012-12, roč. 14, čís. 12, s. 3122–3145. Dostupné online [cit. 2023-12-05]. ISSN1462-2912. DOI10.1111/j.1462-2920.2012.02893.x. (anglicky)
doi.wiley.com
URAKAWA, Hidetoshi; MARTENS-HABBENA, Willm; STAHL, David A. Physiology and Genomics of Ammonia-Oxidizing Archaea. Příprava vydání Bess B. Ward, Daniel J. Arp, Martin G. Klotz. Washington, DC, USA: ASM Press Dostupné online. ISBN978-1-68367-116-9, ISBN978-1-55581-714-5. DOI10.1128/9781555817145.ch6. S. 115–155. (anglicky) DOI: 10.1128/9781555817145.ch6.
worldcat.org
WHITMAN, William B.; OREN, Aharon; CHUVOCHINA, Maria. Proposal of the suffix –ota to denote phyla. Addendum to ‘Proposal to include the rank of phylum in the International Code of Nomenclature of Prokaryotes’. International Journal of Systematic and Evolutionary Microbiology. 2018, roč. 68, čís. 3, s. 967–969. Dostupné online [cit. 2023-11-28]. ISSN1466-5034. DOI10.1099/ijsem.0.002593.
OREN, Aharon; GARRITY, George M. Valid publication of the names of forty-two phyla of prokaryotes. International Journal of Systematic and Evolutionary Microbiology. 2021, roč. 71, čís. 10, s. 005056. Dostupné online [cit. 2023-11-19]. ISSN1466-5034. DOI10.1099/ijsem.0.005056.
BROCHIER-ARMANET, Céline; BOUSSAU, Bastien; GRIBALDO, Simonetta. Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota. Nature Reviews Microbiology. 2008-03, roč. 6, čís. 3, s. 245–252. Dostupné online [cit. 2023-11-19]. ISSN1740-1534. DOI10.1038/nrmicro1852. (anglicky)
SPANG, Anja; HATZENPICHLER, Roland; BROCHIER-ARMANET, Céline. Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota. Trends in Microbiology. 2010-08, roč. 18, čís. 8, s. 331–340. PMID: 20598889. Dostupné online [cit. 2023-11-19]. ISSN1878-4380. DOI10.1016/j.tim.2010.06.003. PMID20598889.
YIN, Zhixuan; BI, Xuejun; XU, Chenlu. Ammonia-Oxidizing Archaea (AOA) Play with Ammonia-Oxidizing Bacteria (AOB) in Nitrogen Removal from Wastewater. Archaea. 2018-09-13, roč. 2018, s. 8429145. PMID: 30302054
PMCID: PMC6158934. Dostupné online [cit. 2023-12-07]. ISSN1472-3646. DOI10.1155/2018/8429145. PMID30302054.
DAMSTÉ, Jaap S. Sinninghe; SCHOUTEN, Stefan; HOPMANS, Ellen C. Crenarchaeol: the characteristic core glycerol dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic crenarchaeota. Journal of Lipid Research. 2002-10, roč. 43, čís. 10, s. 1641–1651. PMID: 12364548. Dostupné online [cit. 2023-11-30]. ISSN0022-2275. DOI10.1194/jlr.m200148-jlr200. PMID12364548.
KÖNNEKE, Martin; BERNHARD, Anne E.; DE LA TORRE, José R. Isolation of an autotrophic ammonia-oxidizing marine archaeon. Nature. 2005-09, roč. 437, čís. 7058, s. 543–546. Dostupné online [cit. 2023-12-03]. ISSN1476-4687. DOI10.1038/nature03911. (anglicky)
SCHOUTEN, Stefan; HOPMANS, Ellen C.; BAAS, Marianne. Intact Membrane Lipids of “ Candidatus Nitrosopumilus maritimus,” a Cultivated Representative of the Cosmopolitan Mesophilic Group I Crenarchaeota. Applied and Environmental Microbiology. 2008-04-15, roč. 74, čís. 8, s. 2433–2440. Dostupné online [cit. 2023-12-05]. ISSN0099-2240. DOI10.1128/AEM.01709-07. PMID18296531. (anglicky)
MOSIER, Annika C.; LUND, Marie B.; FRANCIS, Christopher A. Ecophysiology of an ammonia-oxidizing archaeon adapted to low-salinity habitats. Microbial Ecology. 2012-11, roč. 64, čís. 4, s. 955–963. PMID: 22644483. Dostupné online [cit. 2023-12-03]. ISSN1432-184X. DOI10.1007/s00248-012-0075-1. PMID22644483.
PESTER, Michael; SCHLEPER, Christa; WAGNER, Michael. The Thaumarchaeota: an emerging view of their phylogeny and ecophysiology. Current Opinion in Microbiology. 2011-6, roč. 14, čís. 3, s. 300–306. PMID: 21546306
PMCID: PMC3126993. Dostupné online [cit. 2023-11-19]. ISSN1369-5274. DOI10.1016/j.mib.2011.04.007. PMID21546306.
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.0913533107. PMID20421470.
KEROU, Melina; PONCE-TOLEDO, Rafael I.; ZHAO, Rui. Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages. The ISME Journal. 2021-09, roč. 15, čís. 9, s. 2792–2808. Dostupné online [cit. 2023-11-30]. ISSN1751-7370. DOI10.1038/s41396-021-00962-6. (anglicky)
PRESTON, C M; WU, K Y; MOLINSKI, T F. A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov.. Proceedings of the National Academy of Sciences of the United States of America. 1996-06-25, roč. 93, čís. 13, s. 6241–6246. PMID: 8692799
PMCID: PMC39006. Dostupné online [cit. 2023-11-30]. ISSN0027-8424. PMID8692799.
DOXEY, Andrew C.; KURTZ, Daniel A.; LYNCH, Michael DJ. Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production. The ISME Journal. 2015-02, roč. 9, čís. 2, s. 461–471. Dostupné online [cit. 2023-11-19]. ISSN1751-7370. DOI10.1038/ismej.2014.142. (anglicky)
TOURNA, Maria; STIEGLMEIER, Michaela; SPANG, Anja. Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proceedings of the National Academy of Sciences of the United States of America. 2011-05-17, roč. 108, čís. 20, s. 8420–8425. PMID: 21525411
PMCID: PMC3100973. Dostupné online [cit. 2023-11-19]. ISSN1091-6490. DOI10.1073/pnas.1013488108. PMID21525411.
LIMPIYAKORN, Tawan; FÜRHACKER, Maria; HABERL, Raimund. amoA-encoding archaea in wastewater treatment plants: a review. Applied Microbiology and Biotechnology. 2013-02-01, roč. 97, čís. 4, s. 1425–1439. Dostupné online [cit. 2023-11-30]. ISSN1432-0614. DOI10.1007/s00253-012-4650-7. (anglicky)
MULLER, Félix; BRISSAC, Terry; LE BRIS, Nadine. First description of giant Archaea ( Thaumarchaeota ) associated with putative bacterial ectosymbionts in a sulfidic marine habitat. Environmental Microbiology. 2010-08, roč. 12, čís. 8, s. 2371–2383. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2010.02309.x. (anglicky)
DE LA TORRE, José R.; WALKER, Christopher B.; INGALLS, Anitra E. Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol. Environmental Microbiology. 2008-03, roč. 10, čís. 3, s. 810–818. Dostupné online [cit. 2023-11-19]. ISSN1462-2912. DOI10.1111/j.1462-2920.2007.01506.x. (anglicky)
HATZENPICHLER, Roland; LEBEDEVA, Elena V.; SPIECK, Eva. A moderately thermophilic ammonia-oxidizing crenarchaeote from a hot spring. Proceedings of the National Academy of Sciences of the United States of America. 2008-02-12, roč. 105, čís. 6, s. 2134–2139. PMID: 18250313
PMCID: PMC2538889. Dostupné online [cit. 2023-12-03]. ISSN1091-6490. DOI10.1073/pnas.0708857105. PMID18250313.
BROCHIER-ARMANET, Céline; GRIBALDO, Simonetta; FORTERRE, Patrick. A DNA topoisomerase IB in Thaumarchaeota testifies for the presence of this enzyme in the last common ancestor of Archaea and Eucarya. Biology Direct. 2008-12-23, roč. 3, s. 54. PMID: 19105819
PMCID: PMC2621148. Dostupné online [cit. 2023-12-05]. ISSN1745-6150. DOI10.1186/1745-6150-3-54. PMID19105819.
SPANG, Anja; POEHLEIN, Anja; OFFRE, Pierre. The genome of the ammonia‐oxidizing C andidatus N itrososphaera gargensis: insights into metabolic versatility and environmental adaptations. Environmental Microbiology. 2012-12, roč. 14, čís. 12, s. 3122–3145. Dostupné online [cit. 2023-12-05]. ISSN1462-2912. DOI10.1111/j.1462-2920.2012.02893.x. (anglicky)
MARTENS-HABBENA, Willm; BERUBE, Paul M.; URAKAWA, Hidetoshi. Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature. 2009-10, roč. 461, čís. 7266, s. 976–979. Dostupné online [cit. 2023-11-28]. ISSN1476-4687. DOI10.1038/nature08465. (anglicky)
WALKER, C. B.; DE LA TORRE, J. R.; KLOTZ, M. G. Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea. Proceedings of the National Academy of Sciences of the United States of America. 2010-05-11, roč. 107, čís. 19, s. 8818–8823. PMID: 20421470
PMCID: PMC2889351. Dostupné online [cit. 2023-11-28]. ISSN0027-8424. DOI10.1073/pnas.0913533107. PMID20421470.
BERG, Ivan A.; KOCKELKORN, Daniel; BUCKEL, Wolfgang. A 3-hydroxypropionate/4-hydroxybutyrate autotrophic carbon dioxide assimilation pathway in Archaea. Science (New York, N.Y.). 2007-12-14, roč. 318, čís. 5857, s. 1782–1786. PMID: 18079405. Dostupné online [cit. 2023-11-28]. ISSN1095-9203. DOI10.1126/science.1149976. PMID18079405.