Ana Pombo, Niall Dillon: Three-dimensional genome architecture: players and mechanisms. In: Nature Reviews Molecular Cell Biology. Band16, Nr.4, April 2015, ISSN1471-0072, S.245–257, doi:10.1038/nrm3965.
Elphège P. Nora, Bryan R. Lajoie, Edda G. Schulz, Luca Giorgetti, Ikuhiro Okamoto: Spatial partitioning of the regulatory landscape of the X-inactivation centre. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.381–385, doi:10.1038/nature11049, PMID 22495304, PMC 3555144 (freier Volltext).
Wouter de Laat, Denis Duboule: Topology of mammalian developmental enhancers and their regulatory landscapes. In: Nature. Band502, Nr.7472, Oktober 2013, ISSN0028-0836, S.499–506, doi:10.1038/nature12753 (nature.com [abgerufen am 16. Juli 2019]).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Ana Pombo, Niall Dillon: Three-dimensional genome architecture: players and mechanisms. In: Nature Reviews Molecular Cell Biology. Band16, Nr.4, April 2015, ISSN1471-0072, S.245–257, doi:10.1038/nrm3965 (nature.com [abgerufen am 26. Juli 2019]).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Are TADs supercoiled? In: Nucleic Acids Research. Band47, Nr.2, 25. Januar 2019, ISSN0305-1048, S.521–532, doi:10.1093/nar/gky1091, PMID 30395328, PMC 6344874 (freier Volltext).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes. In: Nucleic Acids Research. Band46, Nr.4, 28. Februar 2018, ISSN0305-1048, S.1648–1660, doi:10.1093/nar/gkx1123, PMID 29140466, PMC 5829651 (freier Volltext).
Daniel Jost, Cédric Vaillant, Peter Meister: Coupling 1D modifications and 3D nuclear organization: data, models and function. In: Current Opinion in Cell Biology. Band44, Februar 2017, ISSN1879-0410, S.20–27, doi:10.1016/j.ceb.2016.12.001, PMID 28040646.
Benjamin D. Pope, Tyrone Ryba, Vishnu Dileep, Feng Yue, Weisheng Wu: Topologically associating domains are stable units of replication-timing regulation. In: Nature. Band515, Nr.7527, 20. November 2014, ISSN1476-4687, S.402–405, doi:10.1038/nature13986, PMID 25409831, PMC 4251741 (freier Volltext).
Xiong Ji, Daniel B. Dadon, Benjamin E. Powell, Zi Peng Fan, Diego Borges-Rivera: 3D Chromosome Regulatory Landscape of Human Pluripotent Cells. In: Cell Stem Cell. Band18, Nr.2, 4. Februar 2016, ISSN1875-9777, S.262–275, doi:10.1016/j.stem.2015.11.007, PMID 26686465, PMC 4848748 (freier Volltext).
Darío G. Lupiáñez, Malte Spielmann, Stefan Mundlos: Breaking TADs: How Alterations of Chromatin Domains Result in Disease. In: Trends in genetics: TIG. Band32, Nr.4, April 2016, ISSN0168-9525, S.225–237, doi:10.1016/j.tig.2016.01.003, PMID 26862051.
Darío G. Lupiáñez, Katerina Kraft, Verena Heinrich, Peter Krawitz, Francesco Brancati: Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions. In: Cell. Band161, Nr.5, 21. Mai 2015, ISSN1097-4172, S.1012–1025, doi:10.1016/j.cell.2015.04.004, PMID 25959774, PMC 4791538 (freier Volltext).
Martin Franke, Daniel M. Ibrahim, Guillaume Andrey, Wibke Schwarzer, Verena Heinrich: Formation of new chromatin domains determines pathogenicity of genomic duplications. In: Nature. Band538, Nr.7624, 13. Oktober 2016, ISSN1476-4687, S.265–269, doi:10.1038/nature19800, PMID 27706140.
Denes Hnisz, Abraham S. Weintraub, Daniel S. Day, Anne-Laure Valton, Rasmus O. Bak: Activation of proto-oncogenes by disruption of chromosome neighborhoods. In: Science. Band351, Nr.6280, 25. März 2016, ISSN1095-9203, S.1454–1458, doi:10.1126/science.aad9024, PMID 26940867, PMC 4884612 (freier Volltext).
William A. Flavahan, Yotam Drier, Brian B. Liau, Shawn M. Gillespie, Andrew S. Venteicher: Insulator dysfunction and oncogene activation in IDH mutant gliomas. In: Nature. Band529, Nr.7584, 7. Januar 2016, ISSN1476-4687, S.110–114, doi:10.1038/nature16490, PMID 26700815, PMC 4831574 (freier Volltext).
Joachim Weischenfeldt, Taronish Dubash, Alexandros P. Drainas, Balca R. Mardin, Yuanyuan Chen: Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking. In: Nature Genetics. Band49, Nr.1, Januar 2017, ISSN1546-1718, S.65–74, doi:10.1038/ng.3722, PMID 27869826, PMC 5791882 (freier Volltext).
Adriana Gonzalez-Sandoval, Susan M. Gasser: On TADs and LADs: Spatial Control Over Gene Expression. In: Trends in genetics: TIG. Band32, Nr.8, August 2016, ISSN0168-9525, S.485–495, doi:10.1016/j.tig.2016.05.004, PMID 27312344.
Mo Li, Guang-Hui Liu, Juan Carlos Izpisua Belmonte: Navigating the epigenetic landscape of pluripotent stem cells. In: Nature Reviews. Molecular Cell Biology. Band13, Nr.8, 23. Juli 2012, ISSN1471-0080, S.524–535, doi:10.1038/nrm3393, PMID 22820889.
nature.com
Wouter de Laat, Denis Duboule: Topology of mammalian developmental enhancers and their regulatory landscapes. In: Nature. Band502, Nr.7472, Oktober 2013, ISSN0028-0836, S.499–506, doi:10.1038/nature12753 (nature.com [abgerufen am 16. Juli 2019]).
Ana Pombo, Niall Dillon: Three-dimensional genome architecture: players and mechanisms. In: Nature Reviews Molecular Cell Biology. Band16, Nr.4, April 2015, ISSN1471-0072, S.245–257, doi:10.1038/nrm3965 (nature.com [abgerufen am 26. Juli 2019]).
nih.gov
ncbi.nlm.nih.gov
Elphège P. Nora, Bryan R. Lajoie, Edda G. Schulz, Luca Giorgetti, Ikuhiro Okamoto: Spatial partitioning of the regulatory landscape of the X-inactivation centre. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.381–385, doi:10.1038/nature11049, PMID 22495304, PMC 3555144 (freier Volltext).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Are TADs supercoiled? In: Nucleic Acids Research. Band47, Nr.2, 25. Januar 2019, ISSN0305-1048, S.521–532, doi:10.1093/nar/gky1091, PMID 30395328, PMC 6344874 (freier Volltext).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes. In: Nucleic Acids Research. Band46, Nr.4, 28. Februar 2018, ISSN0305-1048, S.1648–1660, doi:10.1093/nar/gkx1123, PMID 29140466, PMC 5829651 (freier Volltext).
Daniel Jost, Cédric Vaillant, Peter Meister: Coupling 1D modifications and 3D nuclear organization: data, models and function. In: Current Opinion in Cell Biology. Band44, Februar 2017, ISSN1879-0410, S.20–27, doi:10.1016/j.ceb.2016.12.001, PMID 28040646.
Benjamin D. Pope, Tyrone Ryba, Vishnu Dileep, Feng Yue, Weisheng Wu: Topologically associating domains are stable units of replication-timing regulation. In: Nature. Band515, Nr.7527, 20. November 2014, ISSN1476-4687, S.402–405, doi:10.1038/nature13986, PMID 25409831, PMC 4251741 (freier Volltext).
Xiong Ji, Daniel B. Dadon, Benjamin E. Powell, Zi Peng Fan, Diego Borges-Rivera: 3D Chromosome Regulatory Landscape of Human Pluripotent Cells. In: Cell Stem Cell. Band18, Nr.2, 4. Februar 2016, ISSN1875-9777, S.262–275, doi:10.1016/j.stem.2015.11.007, PMID 26686465, PMC 4848748 (freier Volltext).
Darío G. Lupiáñez, Malte Spielmann, Stefan Mundlos: Breaking TADs: How Alterations of Chromatin Domains Result in Disease. In: Trends in genetics: TIG. Band32, Nr.4, April 2016, ISSN0168-9525, S.225–237, doi:10.1016/j.tig.2016.01.003, PMID 26862051.
Darío G. Lupiáñez, Katerina Kraft, Verena Heinrich, Peter Krawitz, Francesco Brancati: Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions. In: Cell. Band161, Nr.5, 21. Mai 2015, ISSN1097-4172, S.1012–1025, doi:10.1016/j.cell.2015.04.004, PMID 25959774, PMC 4791538 (freier Volltext).
Martin Franke, Daniel M. Ibrahim, Guillaume Andrey, Wibke Schwarzer, Verena Heinrich: Formation of new chromatin domains determines pathogenicity of genomic duplications. In: Nature. Band538, Nr.7624, 13. Oktober 2016, ISSN1476-4687, S.265–269, doi:10.1038/nature19800, PMID 27706140.
Denes Hnisz, Abraham S. Weintraub, Daniel S. Day, Anne-Laure Valton, Rasmus O. Bak: Activation of proto-oncogenes by disruption of chromosome neighborhoods. In: Science. Band351, Nr.6280, 25. März 2016, ISSN1095-9203, S.1454–1458, doi:10.1126/science.aad9024, PMID 26940867, PMC 4884612 (freier Volltext).
William A. Flavahan, Yotam Drier, Brian B. Liau, Shawn M. Gillespie, Andrew S. Venteicher: Insulator dysfunction and oncogene activation in IDH mutant gliomas. In: Nature. Band529, Nr.7584, 7. Januar 2016, ISSN1476-4687, S.110–114, doi:10.1038/nature16490, PMID 26700815, PMC 4831574 (freier Volltext).
Joachim Weischenfeldt, Taronish Dubash, Alexandros P. Drainas, Balca R. Mardin, Yuanyuan Chen: Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking. In: Nature Genetics. Band49, Nr.1, Januar 2017, ISSN1546-1718, S.65–74, doi:10.1038/ng.3722, PMID 27869826, PMC 5791882 (freier Volltext).
Adriana Gonzalez-Sandoval, Susan M. Gasser: On TADs and LADs: Spatial Control Over Gene Expression. In: Trends in genetics: TIG. Band32, Nr.8, August 2016, ISSN0168-9525, S.485–495, doi:10.1016/j.tig.2016.05.004, PMID 27312344.
Mo Li, Guang-Hui Liu, Juan Carlos Izpisua Belmonte: Navigating the epigenetic landscape of pluripotent stem cells. In: Nature Reviews. Molecular Cell Biology. Band13, Nr.8, 23. Juli 2012, ISSN1471-0080, S.524–535, doi:10.1038/nrm3393, PMID 22820889.
zdb-katalog.de
Ana Pombo, Niall Dillon: Three-dimensional genome architecture: players and mechanisms. In: Nature Reviews Molecular Cell Biology. Band16, Nr.4, April 2015, ISSN1471-0072, S.245–257, doi:10.1038/nrm3965.
Elphège P. Nora, Bryan R. Lajoie, Edda G. Schulz, Luca Giorgetti, Ikuhiro Okamoto: Spatial partitioning of the regulatory landscape of the X-inactivation centre. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.381–385, doi:10.1038/nature11049, PMID 22495304, PMC 3555144 (freier Volltext).
Wouter de Laat, Denis Duboule: Topology of mammalian developmental enhancers and their regulatory landscapes. In: Nature. Band502, Nr.7472, Oktober 2013, ISSN0028-0836, S.499–506, doi:10.1038/nature12753 (nature.com [abgerufen am 16. Juli 2019]).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Jesse R. Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li: Topological domains in mammalian genomes identified by analysis of chromatin interactions. In: Nature. Band485, Nr.7398, Mai 2012, ISSN0028-0836, S.376–380, doi:10.1038/nature11082, PMID 22495300, PMC 3356448 (freier Volltext).
Ana Pombo, Niall Dillon: Three-dimensional genome architecture: players and mechanisms. In: Nature Reviews Molecular Cell Biology. Band16, Nr.4, April 2015, ISSN1471-0072, S.245–257, doi:10.1038/nrm3965 (nature.com [abgerufen am 26. Juli 2019]).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Are TADs supercoiled? In: Nucleic Acids Research. Band47, Nr.2, 25. Januar 2019, ISSN0305-1048, S.521–532, doi:10.1093/nar/gky1091, PMID 30395328, PMC 6344874 (freier Volltext).
Dusan Racko, Fabrizio Benedetti, Julien Dorier, Andrzej Stasiak: Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes. In: Nucleic Acids Research. Band46, Nr.4, 28. Februar 2018, ISSN0305-1048, S.1648–1660, doi:10.1093/nar/gkx1123, PMID 29140466, PMC 5829651 (freier Volltext).
Daniel Jost, Cédric Vaillant, Peter Meister: Coupling 1D modifications and 3D nuclear organization: data, models and function. In: Current Opinion in Cell Biology. Band44, Februar 2017, ISSN1879-0410, S.20–27, doi:10.1016/j.ceb.2016.12.001, PMID 28040646.
Benjamin D. Pope, Tyrone Ryba, Vishnu Dileep, Feng Yue, Weisheng Wu: Topologically associating domains are stable units of replication-timing regulation. In: Nature. Band515, Nr.7527, 20. November 2014, ISSN1476-4687, S.402–405, doi:10.1038/nature13986, PMID 25409831, PMC 4251741 (freier Volltext).
Xiong Ji, Daniel B. Dadon, Benjamin E. Powell, Zi Peng Fan, Diego Borges-Rivera: 3D Chromosome Regulatory Landscape of Human Pluripotent Cells. In: Cell Stem Cell. Band18, Nr.2, 4. Februar 2016, ISSN1875-9777, S.262–275, doi:10.1016/j.stem.2015.11.007, PMID 26686465, PMC 4848748 (freier Volltext).
Darío G. Lupiáñez, Malte Spielmann, Stefan Mundlos: Breaking TADs: How Alterations of Chromatin Domains Result in Disease. In: Trends in genetics: TIG. Band32, Nr.4, April 2016, ISSN0168-9525, S.225–237, doi:10.1016/j.tig.2016.01.003, PMID 26862051.
Darío G. Lupiáñez, Katerina Kraft, Verena Heinrich, Peter Krawitz, Francesco Brancati: Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions. In: Cell. Band161, Nr.5, 21. Mai 2015, ISSN1097-4172, S.1012–1025, doi:10.1016/j.cell.2015.04.004, PMID 25959774, PMC 4791538 (freier Volltext).
Martin Franke, Daniel M. Ibrahim, Guillaume Andrey, Wibke Schwarzer, Verena Heinrich: Formation of new chromatin domains determines pathogenicity of genomic duplications. In: Nature. Band538, Nr.7624, 13. Oktober 2016, ISSN1476-4687, S.265–269, doi:10.1038/nature19800, PMID 27706140.
Denes Hnisz, Abraham S. Weintraub, Daniel S. Day, Anne-Laure Valton, Rasmus O. Bak: Activation of proto-oncogenes by disruption of chromosome neighborhoods. In: Science. Band351, Nr.6280, 25. März 2016, ISSN1095-9203, S.1454–1458, doi:10.1126/science.aad9024, PMID 26940867, PMC 4884612 (freier Volltext).
William A. Flavahan, Yotam Drier, Brian B. Liau, Shawn M. Gillespie, Andrew S. Venteicher: Insulator dysfunction and oncogene activation in IDH mutant gliomas. In: Nature. Band529, Nr.7584, 7. Januar 2016, ISSN1476-4687, S.110–114, doi:10.1038/nature16490, PMID 26700815, PMC 4831574 (freier Volltext).
Joachim Weischenfeldt, Taronish Dubash, Alexandros P. Drainas, Balca R. Mardin, Yuanyuan Chen: Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking. In: Nature Genetics. Band49, Nr.1, Januar 2017, ISSN1546-1718, S.65–74, doi:10.1038/ng.3722, PMID 27869826, PMC 5791882 (freier Volltext).
Adriana Gonzalez-Sandoval, Susan M. Gasser: On TADs and LADs: Spatial Control Over Gene Expression. In: Trends in genetics: TIG. Band32, Nr.8, August 2016, ISSN0168-9525, S.485–495, doi:10.1016/j.tig.2016.05.004, PMID 27312344.
Mo Li, Guang-Hui Liu, Juan Carlos Izpisua Belmonte: Navigating the epigenetic landscape of pluripotent stem cells. In: Nature Reviews. Molecular Cell Biology. Band13, Nr.8, 23. Juli 2012, ISSN1471-0080, S.524–535, doi:10.1038/nrm3393, PMID 22820889.