Ανάλυση διαφορικής γονιδιακής έκφρασης (Greek Wikipedia)

Analysis of information sources in references of the Wikipedia article "Ανάλυση διαφορικής γονιδιακής έκφρασης" in Greek language version.

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arxiv.org (Global: 69^th place; Greek: 279^th place)

Schurch, Nicholas J.; Schofield, Pieta; Gierliński, Marek; Cole, Christian; Sherstnev, Alexander; Singh, Vijender; Wrobel, Nicola; Gharbi, Karim και άλλοι. (2016-06). «Evaluation of tools for differential gene expression analysis by RNA-seq on a 48 biological replicate experiment». RNA 22 (6): 839–851. doi:10.1261/rna.053959.115. ISSN 1355-8382. http://arxiv.org/abs/1505.02017.

cornell.edu (Global: 332^nd place; Greek: 686^th place)

physiology.med.cornell.edu

D¨undar, Friederike (February 26, 2020). Differential Gene Expression Analysis (DGE). https://physiology.med.cornell.edu/faculty/skrabanek/lab/angsd/lecture_notes/Background_testingForDGE.pdf.

cshprotocols.org (Global: low place; Greek: low place)

Kukurba, Kimberly R.; Montgomery, Stephen B. (2015-11). «RNA Sequencing and Analysis» (στα αγγλικά). Cold Spring Harbor Protocols 2015 (11): pdb.top084970. doi:10.1101/pdb.top084970. ISSN 1940-3402. PMID 25870306. PMC PMC4863231. http://www.cshprotocols.org/lookup/doi/10.1101/pdb.top084970.

degruyter.com (Global: 1,425^th place; Greek: 830^th place)

Auer, Paul L.; Doerge, Rebecca W. (2011-05-16). «A Two-Stage Poisson Model for Testing RNA-Seq Data» (στα αγγλικά). Statistical Applications in Genetics and Molecular Biology 10 (1). doi:10.2202/1544-6115.1627. ISSN 1544-6115. https://www.degruyter.com/document/doi/10.2202/1544-6115.1627/html.

doi.org (Global: 2^nd place; Greek: 3^rd place)

dx.doi.org

Conesa, Ana; Madrigal, Pedro; Tarazona, Sonia; Gomez-Cabrero, David; Cervera, Alejandra; McPherson, Andrew; Szcześniak, Michał Wojciech; Gaffney, Daniel J. και άλλοι. (2016-01-26). «A survey of best practices for RNA-seq data analysis». Genome Biology 17 (1): 13. doi:10.1186/s13059-016-0881-8. ISSN 1474-760X. PMID 26813401. PMC PMC4728800. https://doi.org/10.1186/s13059-016-0881-8.
Anders, Simon; Huber, Wolfgang (2010-04-30). «Differential expression analysis for sequence count data». Nature Precedings. doi:10.1038/npre.2010.4282.2. ISSN 1756-0357. http://dx.doi.org/10.1038/npre.2010.4282.2.
Kukurba, Kimberly R.; Montgomery, Stephen B. (2015-11). «RNA Sequencing and Analysis» (στα αγγλικά). Cold Spring Harbor Protocols 2015 (11): pdb.top084970. doi:10.1101/pdb.top084970. ISSN 1940-3402. PMID 25870306. PMC PMC4863231. http://www.cshprotocols.org/lookup/doi/10.1101/pdb.top084970.
Maher, Christopher A.; Kumar-Sinha, Chandan; Cao, Xuhong; Kalyana-Sundaram, Shanker; Han, Bo; Jing, Xiaojun; Sam, Lee; Barrette, Terrence και άλλοι. (2009-03-05). «Transcriptome sequencing to detect gene fusions in cancer». Nature 458 (7234): 97–101. doi:10.1038/nature07638. ISSN 1476-4687. PMID 19136943. PMC 2725402. https://pubmed.ncbi.nlm.nih.gov/19136943/.
Χουβαρδάς, Παναγιώτης. Υπολογιστική μοντελοποίηση της επιγενετικής ρύθμισης της γονιδιακής έκφρασης κατά την ανάπτυξη χρόνιας φλεγμονής. National Documentation Centre (EKT). http://dx.doi.org/10.12681/eadd/43454.
Perkel, Jeffrey M. (2018-01-30). «Data visualization tools drive interactivity and reproducibility in online publishing». Nature 554 (7690): 133–134. doi:10.1038/d41586-018-01322-9. ISSN 0028-0836. http://dx.doi.org/10.1038/d41586-018-01322-9.
Robinson, M. D.; McCarthy, D. J.; Smyth, G. K. (2009-11-11). «edgeR: a Bioconductor package for differential expression analysis of digital gene expression data». Bioinformatics 26 (1): 139–140. doi:10.1093/bioinformatics/btp616. ISSN 1367-4803. http://dx.doi.org/10.1093/bioinformatics/btp616.
Trapnell, Cole; Hendrickson, David G; Sauvageau, Martin; Goff, Loyal; Rinn, John L; Pachter, Lior (2012-12-09). «Differential analysis of gene regulation at transcript resolution with RNA-seq». Nature Biotechnology 31 (1): 46–53. doi:10.1038/nbt.2450. ISSN 1087-0156. http://dx.doi.org/10.1038/nbt.2450.
Love, Michael I; Huber, Wolfgang; Anders, Simon (2014-12). «Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2». Genome Biology 15 (12). doi:10.1186/s13059-014-0550-8. ISSN 1474-760X. http://dx.doi.org/10.1186/s13059-014-0550-8.
Tarazona, Sonia; García, Fernando; Ferrer, Alberto; Dopazo, Joaquín; Conesa, Ana (2012-02-28). «NOIseq: a RNA-seq differential expression method robust for sequencing depth biases». EMBnet.journal 17 (B): 18. doi:10.14806/ej.17.b.265. ISSN 2226-6089. http://dx.doi.org/10.14806/ej.17.b.265.
Li, Jun; Tibshirani, Robert (2011-11-28). «Finding consistent patterns: A nonparametric approach for identifying differential expression in RNA-Seq data». Statistical Methods in Medical Research 22 (5): 519–536. doi:10.1177/0962280211428386. ISSN 0962-2802. http://dx.doi.org/10.1177/0962280211428386.
Pimentel, Harold; Bray, Nicolas L; Puente, Suzette; Melsted, Páll; Pachter, Lior (2017-06-05). «Differential analysis of RNA-seq incorporating quantification uncertainty». Nature Methods 14 (7): 687–690. doi:10.1038/nmeth.4324. ISSN 1548-7091. http://dx.doi.org/10.1038/nmeth.4324.
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K. (2015-01-20). «limma powers differential expression analyses for RNA-sequencing and microarray studies». Nucleic Acids Research 43 (7): e47–e47. doi:10.1093/nar/gkv007. ISSN 1362-4962. http://dx.doi.org/10.1093/nar/gkv007.
Guo, Yan; Li, Chung-I; Ye, Fei; Shyr, Yu (2013-12-09). «Evaluation of read count based RNAseq analysis methods». BMC Genomics 14 (8): S2. doi:10.1186/1471-2164-14-S8-S2. ISSN 1471-2164. PMID 24564449. PMC PMC4092879. https://doi.org/10.1186/1471-2164-14-S8-S2.
Auer, Paul L.; Doerge, Rebecca W. (2011-05-16). «A Two-Stage Poisson Model for Testing RNA-Seq Data» (στα αγγλικά). Statistical Applications in Genetics and Molecular Biology 10 (1). doi:10.2202/1544-6115.1627. ISSN 1544-6115. https://www.degruyter.com/document/doi/10.2202/1544-6115.1627/html.
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K. (2015-04-20). «limma powers differential expression analyses for RNA-sequencing and microarray studies». Nucleic Acids Research 43 (7): e47–e47. doi:10.1093/nar/gkv007. ISSN 0305-1048. PMID 25605792. PMC PMC4402510. https://doi.org/10.1093/nar/gkv007.
Hardcastle, Thomas J.; Kelly, Krystyna A. (2010-08-10). «baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data». BMC Bioinformatics 11 (1): 422. doi:10.1186/1471-2105-11-422. ISSN 1471-2105. PMID 20698981. PMC PMC2928208. https://doi.org/10.1186/1471-2105-11-422.
Leng, Ning; Dawson, John A.; Thomson, James A.; Ruotti, Victor; Rissman, Anna I.; Smits, Bart M. G.; Haag, Jill D.; Gould, Michael N. και άλλοι. (2013-04-15). «EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments». Bioinformatics 29 (8): 1035–1043. doi:10.1093/bioinformatics/btt087. ISSN 1367-4803. PMID 23428641. PMC PMC3624807. https://doi.org/10.1093/bioinformatics/btt087.
Van De Wiel, Mark A.; Leday, Gwenaël G.R.; Pardo, Luba; Rue, Håvard; Van Der Vaart, Aad W.; Van Wieringen, Wessel N. (2013-01-01). «Bayesian analysis of RNA sequencing data by estimating multiple shrinkage priors». Biostatistics 14 (1): 113–128. doi:10.1093/biostatistics/kxs031. ISSN 1465-4644. https://doi.org/10.1093/biostatistics/kxs031.
Law, Charity W.; Chen, Yunshun; Shi, Wei; Smyth, Gordon K. (2014-02-03). «voom: precision weights unlock linear model analysis tools for RNA-seq read counts». Genome Biology 15 (2): R29. doi:10.1186/gb-2014-15-2-r29. ISSN 1474-760X. PMID 24485249. PMC PMC4053721. https://doi.org/10.1186/gb-2014-15-2-r29.
Schurch, Nicholas J.; Schofield, Pieta; Gierliński, Marek; Cole, Christian; Sherstnev, Alexander; Singh, Vijender; Wrobel, Nicola; Gharbi, Karim και άλλοι. (2016-06). «Evaluation of tools for differential gene expression analysis by RNA-seq on a 48 biological replicate experiment». RNA 22 (6): 839–851. doi:10.1261/rna.053959.115. ISSN 1355-8382. http://arxiv.org/abs/1505.02017.
Rapaport, Franck; Khanin, Raya; Liang, Yupu; Pirun, Mono; Krek, Azra; Zumbo, Paul; Mason, Christopher E.; Socci, Nicholas D. και άλλοι. (2013-09-10). «Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data». Genome Biology 14 (9): 3158. doi:10.1186/gb-2013-14-9-r95. ISSN 1474-760X. PMID 24020486. PMC PMC4054597. https://doi.org/10.1186/gb-2013-14-9-r95.
Τσιμπίρης, Αλκιβιάδης. Εξόρυξη γνώσης από βάσεις χρονοσειρών. National Documentation Centre (EKT). http://dx.doi.org/10.12681/eadd/27116.
Jackson, Roger S.· Stein, Susanne (2002). Differential Display of Gene Expression in Human Carcinomas. Elsevier. σελίδες 75–83.
Grant, Gregory R.; Manduchi, Elisabetta; Stoeckert, Christian J. (2007-01). «Analysis and Management of Microarray Gene Expression Data». Current Protocols in Molecular Biology 77 (1). doi:10.1002/0471142727.mb1906s77. ISSN 1934-3639. http://dx.doi.org/10.1002/0471142727.mb1906s77.
Curtis, R. Keira; Orešič, Matej; Vidal-Puig, Antonio (2005-08). «Pathways to the analysis of microarray data». Trends in Biotechnology 23 (8): 429–435. doi:10.1016/j.tibtech.2005.05.011. ISSN 0167-7799. http://dx.doi.org/10.1016/j.tibtech.2005.05.011.
Werner, Thomas (2008-02). «Bioinformatics applications for pathway analysis of microarray data». Current Opinion in Biotechnology 19 (1): 50–54. doi:10.1016/j.copbio.2007.11.005. ISSN 0958-1669. http://dx.doi.org/10.1016/j.copbio.2007.11.005.
S.A. Deepak; K.R. Kottapalli; R. Rakwal; G. Oros; K.S. Rangappa; H. Iwahashi; Y. Masuo; G.K. Agrawal (2007-06-01). «Real-Time PCR: Revolutionizing Detection and Expression Analysis of Genes» (στα αγγλικά). Current Genomics 8 (4): 234–251. doi:10.2174/138920207781386960. PMID 18645596. PMC PMC2430684. http://www.eurekaselect.com/openurl/content.php?genre=article&issn=1389-2029&volume=8&issue=4&spage=234.

doi.org

Conesa, Ana; Madrigal, Pedro; Tarazona, Sonia; Gomez-Cabrero, David; Cervera, Alejandra; McPherson, Andrew; Szcześniak, Michał Wojciech; Gaffney, Daniel J. και άλλοι. (2016-01-26). «A survey of best practices for RNA-seq data analysis». Genome Biology 17 (1): 13. doi:10.1186/s13059-016-0881-8. ISSN 1474-760X. PMID 26813401. PMC PMC4728800. https://doi.org/10.1186/s13059-016-0881-8.
Guo, Yan; Li, Chung-I; Ye, Fei; Shyr, Yu (2013-12-09). «Evaluation of read count based RNAseq analysis methods». BMC Genomics 14 (8): S2. doi:10.1186/1471-2164-14-S8-S2. ISSN 1471-2164. PMID 24564449. PMC PMC4092879. https://doi.org/10.1186/1471-2164-14-S8-S2.
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K. (2015-04-20). «limma powers differential expression analyses for RNA-sequencing and microarray studies». Nucleic Acids Research 43 (7): e47–e47. doi:10.1093/nar/gkv007. ISSN 0305-1048. PMID 25605792. PMC PMC4402510. https://doi.org/10.1093/nar/gkv007.
Hardcastle, Thomas J.; Kelly, Krystyna A. (2010-08-10). «baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data». BMC Bioinformatics 11 (1): 422. doi:10.1186/1471-2105-11-422. ISSN 1471-2105. PMID 20698981. PMC PMC2928208. https://doi.org/10.1186/1471-2105-11-422.
Leng, Ning; Dawson, John A.; Thomson, James A.; Ruotti, Victor; Rissman, Anna I.; Smits, Bart M. G.; Haag, Jill D.; Gould, Michael N. και άλλοι. (2013-04-15). «EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments». Bioinformatics 29 (8): 1035–1043. doi:10.1093/bioinformatics/btt087. ISSN 1367-4803. PMID 23428641. PMC PMC3624807. https://doi.org/10.1093/bioinformatics/btt087.
Van De Wiel, Mark A.; Leday, Gwenaël G.R.; Pardo, Luba; Rue, Håvard; Van Der Vaart, Aad W.; Van Wieringen, Wessel N. (2013-01-01). «Bayesian analysis of RNA sequencing data by estimating multiple shrinkage priors». Biostatistics 14 (1): 113–128. doi:10.1093/biostatistics/kxs031. ISSN 1465-4644. https://doi.org/10.1093/biostatistics/kxs031.
Law, Charity W.; Chen, Yunshun; Shi, Wei; Smyth, Gordon K. (2014-02-03). «voom: precision weights unlock linear model analysis tools for RNA-seq read counts». Genome Biology 15 (2): R29. doi:10.1186/gb-2014-15-2-r29. ISSN 1474-760X. PMID 24485249. PMC PMC4053721. https://doi.org/10.1186/gb-2014-15-2-r29.
Rapaport, Franck; Khanin, Raya; Liang, Yupu; Pirun, Mono; Krek, Azra; Zumbo, Paul; Mason, Christopher E.; Socci, Nicholas D. και άλλοι. (2013-09-10). «Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data». Genome Biology 14 (9): 3158. doi:10.1186/gb-2013-14-9-r95. ISSN 1474-760X. PMID 24020486. PMC PMC4054597. https://doi.org/10.1186/gb-2013-14-9-r95.
«Validate User». academic.oup.com. doi:10.1093/bib/bbt086. PMC 4293378 . PMID 24300110. Ανακτήθηκε στις 12 Ιουλίου 2022. CS1 maint: PMC format (link)

ebi.ac.uk (Global: 5,849^th place; Greek: low place)

EMBL-EBI. «Differential gene expression analysis | Functional genomics II» (στα Αγγλικά). Ανακτήθηκε στις 4 Ιουλίου 2022.

eurekaselect.com (Global: low place; Greek: low place)

S.A. Deepak; K.R. Kottapalli; R. Rakwal; G. Oros; K.S. Rangappa; H. Iwahashi; Y. Masuo; G.K. Agrawal (2007-06-01). «Real-Time PCR: Revolutionizing Detection and Expression Analysis of Genes» (στα αγγλικά). Current Genomics 8 (4): 234–251. doi:10.2174/138920207781386960. PMID 18645596. PMC PMC2430684. http://www.eurekaselect.com/openurl/content.php?genre=article&issn=1389-2029&volume=8&issue=4&spage=234.

geneviatechnologies.com (Global: low place; Greek: low place)

«Integrative analysis of RNA-seq and ChIP-seq data». Genevia Technologies (στα Αγγλικά). Ανακτήθηκε στις 14 Ιουλίου 2022.

nih.gov (Global: 4^th place; Greek: 4^th place)

ncbi.nlm.nih.gov

Conesa, Ana; Madrigal, Pedro; Tarazona, Sonia; Gomez-Cabrero, David; Cervera, Alejandra; McPherson, Andrew; Szcześniak, Michał Wojciech; Gaffney, Daniel J. και άλλοι. (2016-01-26). «A survey of best practices for RNA-seq data analysis». Genome Biology 17 (1): 13. doi:10.1186/s13059-016-0881-8. ISSN 1474-760X. PMID 26813401. PMC PMC4728800. https://doi.org/10.1186/s13059-016-0881-8.
Kukurba, Kimberly R.; Montgomery, Stephen B. (2015-11). «RNA Sequencing and Analysis» (στα αγγλικά). Cold Spring Harbor Protocols 2015 (11): pdb.top084970. doi:10.1101/pdb.top084970. ISSN 1940-3402. PMID 25870306. PMC PMC4863231. http://www.cshprotocols.org/lookup/doi/10.1101/pdb.top084970.
Maher, Christopher A.; Kumar-Sinha, Chandan; Cao, Xuhong; Kalyana-Sundaram, Shanker; Han, Bo; Jing, Xiaojun; Sam, Lee; Barrette, Terrence και άλλοι. (2009-03-05). «Transcriptome sequencing to detect gene fusions in cancer». Nature 458 (7234): 97–101. doi:10.1038/nature07638. ISSN 1476-4687. PMID 19136943. PMC 2725402. https://pubmed.ncbi.nlm.nih.gov/19136943/.
Guo, Yan; Li, Chung-I; Ye, Fei; Shyr, Yu (2013-12-09). «Evaluation of read count based RNAseq analysis methods». BMC Genomics 14 (8): S2. doi:10.1186/1471-2164-14-S8-S2. ISSN 1471-2164. PMID 24564449. PMC PMC4092879. https://doi.org/10.1186/1471-2164-14-S8-S2.
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K. (2015-04-20). «limma powers differential expression analyses for RNA-sequencing and microarray studies». Nucleic Acids Research 43 (7): e47–e47. doi:10.1093/nar/gkv007. ISSN 0305-1048. PMID 25605792. PMC PMC4402510. https://doi.org/10.1093/nar/gkv007.
Hardcastle, Thomas J.; Kelly, Krystyna A. (2010-08-10). «baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data». BMC Bioinformatics 11 (1): 422. doi:10.1186/1471-2105-11-422. ISSN 1471-2105. PMID 20698981. PMC PMC2928208. https://doi.org/10.1186/1471-2105-11-422.
Leng, Ning; Dawson, John A.; Thomson, James A.; Ruotti, Victor; Rissman, Anna I.; Smits, Bart M. G.; Haag, Jill D.; Gould, Michael N. και άλλοι. (2013-04-15). «EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments». Bioinformatics 29 (8): 1035–1043. doi:10.1093/bioinformatics/btt087. ISSN 1367-4803. PMID 23428641. PMC PMC3624807. https://doi.org/10.1093/bioinformatics/btt087.
Law, Charity W.; Chen, Yunshun; Shi, Wei; Smyth, Gordon K. (2014-02-03). «voom: precision weights unlock linear model analysis tools for RNA-seq read counts». Genome Biology 15 (2): R29. doi:10.1186/gb-2014-15-2-r29. ISSN 1474-760X. PMID 24485249. PMC PMC4053721. https://doi.org/10.1186/gb-2014-15-2-r29.
Rapaport, Franck; Khanin, Raya; Liang, Yupu; Pirun, Mono; Krek, Azra; Zumbo, Paul; Mason, Christopher E.; Socci, Nicholas D. και άλλοι. (2013-09-10). «Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data». Genome Biology 14 (9): 3158. doi:10.1186/gb-2013-14-9-r95. ISSN 1474-760X. PMID 24020486. PMC PMC4054597. https://doi.org/10.1186/gb-2013-14-9-r95.
«Validate User». academic.oup.com. doi:10.1093/bib/bbt086. PMC 4293378 . PMID 24300110. Ανακτήθηκε στις 12 Ιουλίου 2022. CS1 maint: PMC format (link)
S.A. Deepak; K.R. Kottapalli; R. Rakwal; G. Oros; K.S. Rangappa; H. Iwahashi; Y. Masuo; G.K. Agrawal (2007-06-01). «Real-Time PCR: Revolutionizing Detection and Expression Analysis of Genes» (στα αγγλικά). Current Genomics 8 (4): 234–251. doi:10.2174/138920207781386960. PMID 18645596. PMC PMC2430684. http://www.eurekaselect.com/openurl/content.php?genre=article&issn=1389-2029&volume=8&issue=4&spage=234.

pubmedcentral.nih.gov

Conesa, Ana; Madrigal, Pedro; Tarazona, Sonia; Gomez-Cabrero, David; Cervera, Alejandra; McPherson, Andrew; Szcześniak, Michał Wojciech; Gaffney, Daniel J. και άλλοι. (2016-01-26). «A survey of best practices for RNA-seq data analysis». Genome Biology 17 (1): 13. doi:10.1186/s13059-016-0881-8. ISSN 1474-760X. PMID 26813401. PMC PMC4728800. https://doi.org/10.1186/s13059-016-0881-8.
Kukurba, Kimberly R.; Montgomery, Stephen B. (2015-11). «RNA Sequencing and Analysis» (στα αγγλικά). Cold Spring Harbor Protocols 2015 (11): pdb.top084970. doi:10.1101/pdb.top084970. ISSN 1940-3402. PMID 25870306. PMC PMC4863231. http://www.cshprotocols.org/lookup/doi/10.1101/pdb.top084970.
Maher, Christopher A.; Kumar-Sinha, Chandan; Cao, Xuhong; Kalyana-Sundaram, Shanker; Han, Bo; Jing, Xiaojun; Sam, Lee; Barrette, Terrence και άλλοι. (2009-03-05). «Transcriptome sequencing to detect gene fusions in cancer». Nature 458 (7234): 97–101. doi:10.1038/nature07638. ISSN 1476-4687. PMID 19136943. PMC 2725402. https://pubmed.ncbi.nlm.nih.gov/19136943/.
Guo, Yan; Li, Chung-I; Ye, Fei; Shyr, Yu (2013-12-09). «Evaluation of read count based RNAseq analysis methods». BMC Genomics 14 (8): S2. doi:10.1186/1471-2164-14-S8-S2. ISSN 1471-2164. PMID 24564449. PMC PMC4092879. https://doi.org/10.1186/1471-2164-14-S8-S2.
Ritchie, Matthew E.; Phipson, Belinda; Wu, Di; Hu, Yifang; Law, Charity W.; Shi, Wei; Smyth, Gordon K. (2015-04-20). «limma powers differential expression analyses for RNA-sequencing and microarray studies». Nucleic Acids Research 43 (7): e47–e47. doi:10.1093/nar/gkv007. ISSN 0305-1048. PMID 25605792. PMC PMC4402510. https://doi.org/10.1093/nar/gkv007.
Hardcastle, Thomas J.; Kelly, Krystyna A. (2010-08-10). «baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data». BMC Bioinformatics 11 (1): 422. doi:10.1186/1471-2105-11-422. ISSN 1471-2105. PMID 20698981. PMC PMC2928208. https://doi.org/10.1186/1471-2105-11-422.
Leng, Ning; Dawson, John A.; Thomson, James A.; Ruotti, Victor; Rissman, Anna I.; Smits, Bart M. G.; Haag, Jill D.; Gould, Michael N. και άλλοι. (2013-04-15). «EBSeq: an empirical Bayes hierarchical model for inference in RNA-seq experiments». Bioinformatics 29 (8): 1035–1043. doi:10.1093/bioinformatics/btt087. ISSN 1367-4803. PMID 23428641. PMC PMC3624807. https://doi.org/10.1093/bioinformatics/btt087.
Law, Charity W.; Chen, Yunshun; Shi, Wei; Smyth, Gordon K. (2014-02-03). «voom: precision weights unlock linear model analysis tools for RNA-seq read counts». Genome Biology 15 (2): R29. doi:10.1186/gb-2014-15-2-r29. ISSN 1474-760X. PMID 24485249. PMC PMC4053721. https://doi.org/10.1186/gb-2014-15-2-r29.
Rapaport, Franck; Khanin, Raya; Liang, Yupu; Pirun, Mono; Krek, Azra; Zumbo, Paul; Mason, Christopher E.; Socci, Nicholas D. και άλλοι. (2013-09-10). «Comprehensive evaluation of differential gene expression analysis methods for RNA-seq data». Genome Biology 14 (9): 3158. doi:10.1186/gb-2013-14-9-r95. ISSN 1474-760X. PMID 24020486. PMC PMC4054597. https://doi.org/10.1186/gb-2013-14-9-r95.
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pubmed.ncbi.nlm.nih.gov

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worldcat.org (Global: 5^th place; Greek: 8^th place)

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