2R hypothesis (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "2R hypothesis" in English language version.

refsWebsite

Global rank English rank

39nih.gov

4^th place

30doi.org

2^nd place

14semanticscholar.org

11^th place

8^th place

12harvard.edu

18^th place

17^th place

1archives-ouvertes.fr

1,031^st place

879^th place

1books.google.com

3^rd place

archives-ouvertes.fr

hal.archives-ouvertes.fr

Delsuc, F; Brinkmann, H; Chourrout, D; Philippe, H (2006). "Tunicates and not cephalochordates are the closest living relatives of vertebrates" (PDF). Nature. 439 (7079): 965–8. Bibcode:2006Natur.439..965D. doi:10.1038/nature04336. PMID 16495997. S2CID 4382758.

books.google.com

Benton, Michael (2014). Vertebrate Palaeontology. Wiley. p. 92. ISBN 978-1-118-40764-6. Retrieved 19 December 2015.

doi.org

Hokamp, K; McLysaght, A; Wolfe, KH (2003). "The 2R hypothesis and the human genome sequence". Journal of Structural and Functional Genomics. 3 (1–4): 95–110. doi:10.1023/A:1022661917301. PMID 12836689. S2CID 18856088.
Hughes, Austin L. (1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Makalowski, Wojciech (2001). "Are we polyploids? A brief history of one hypothesis". Genome Research. 11 (5): 667–70. doi:10.1101/gr.188801. PMID 11337465.
Schmidtke, Jörg; Weiler, Conrad; Kunz, Brigitte; Engel, Wolfgang (1977). "Isozymes of a tunicate and a cephalochordate as a test of polyploidisation in chordate evolution". Nature. 266 (5602): 532–533. Bibcode:1977Natur.266..532S. doi:10.1038/266532a0. PMID 859619. S2CID 4255382.
Holland, PW (2003). "More genes in vertebrates?". Journal of Structural and Functional Genomics. 3 (1–4): 75–84. doi:10.1023/a:1022656931587. PMID 12836687. S2CID 35418674.
Delsuc, F; Brinkmann, H; Chourrout, D; Philippe, H (2006). "Tunicates and not cephalochordates are the closest living relatives of vertebrates" (PDF). Nature. 439 (7079): 965–8. Bibcode:2006Natur.439..965D. doi:10.1038/nature04336. PMID 16495997. S2CID 4382758.
Lundin, LG (April 1993). "Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse". Genomics. 16 (1): 1–19. doi:10.1006/geno.1993.1133. PMID 8486346.
Garcia-Fernández, J; Holland, PW (Aug 18, 1994). "Archetypal organization of the amphioxus Hox gene cluster". Nature. 370 (6490): 563–6. Bibcode:1994Natur.370..563G. doi:10.1038/370563a0. PMID 7914353. S2CID 4329696.
Dehal, Paramvir; Boore, Jeffrey L. (2005). "Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate". PLOS Biology. 3 (10): e314. doi:10.1371/journal.pbio.0030314. PMC 1197285. PMID 16128622.
Hughes, AL (May 1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Hughes, Austin L.; Friedman, Robert (2003). "2R or not 2R: Testing hypotheses of genome duplication in early vertebrates". Journal of Structural and Functional Genomics. 3 (1/4): 85–93. doi:10.1023/A:1022681600462. PMID 12836688. S2CID 835565.
Furlong, RF; Holland, PW (2002). "Were vertebrates octoploid?". Philosophical Transactions of the Royal Society B. 357 (1420): 531–44. doi:10.1098/rstb.2001.1035. PMC 1692965. PMID 12028790.
Lynch, VJ; Wagner, GP (2009). "Multiple chromosomal rearrangements structured the ancestral vertebrate Hox-bearing protochromosomes". PLOS Genetics. 5 (1): e1000349. doi:10.1371/journal.pgen.1000349. PMC 2622764. PMID 19165336.
Larhammar, D.; Josephson, M (2002). "The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications". Genome Research. 12 (1): 1910–1920. doi:10.1101/gr.445702. PMC 187569. PMID 12466295.
Spring, Jürg (1997). "Vertebrate evolution by interspecific hybridisation – are we polyploid?". FEBS Letters. 400 (1): 2–8. Bibcode:1997FEBSL.400....2S. doi:10.1016/S0014-5793(96)01351-8. PMID 9000502.
Abi-Rached, L; Gilles, A; Shiina, T; Pontarotti, P; Inoko, H (2002). "Evidence of en bloc duplication in vertebrate genomes". Nature Genetics. 31 (1): 100–5. doi:10.1038/ng855. PMID 11967531. S2CID 8516649.
Castro, LF; Holland, PW (Sep–Oct 2003). "Chromosomal mapping of ANTP class homeobox genes in amphioxus: piecing together ancestral genomes". Evolution & Development. 5 (5): 459–65. doi:10.1046/j.1525-142x.2003.03052.x. PMID 12950625. S2CID 38083087.
McLysaght, Aoife; Hokamp, Karsten; Wolfe, Kenneth H. (2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–204. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.
Putnam, NH; Butts, T; Ferrier, DE; Furlong, RF; Hellsten, U; Kawashima, T; Robinson-Rechavi, M; Shoguchi, E; Terry, A; Yu, JK; Benito-Gutiérrez, EL; Dubchak, I; Garcia-Fernàndez, J; Gibson-Brown, JJ; Grigoriev, IV; Horton, AC; de Jong, PJ; Jurka, J; Kapitonov, VV; Kohara, Y; Kuroki, Y; Lindquist, E; Lucas, S; Osoegawa, K; Pennacchio, LA; Salamov, AA; Satou, Y; Sauka-Spengler, T; Schmutz, J; Shin-I, T; Toyoda, A; Bronner-Fraser, M; Fujiyama, A; Holland, LZ; Holland, PW; Satoh, N; Rokhsar, DS (2008). "The amphioxus genome and the evolution of the chordate karyotype". Nature. 453 (7198): 1064–71. Bibcode:2008Natur.453.1064P. doi:10.1038/nature06967. PMID 18563158.
Kasahara, Masanori (2007). "The 2R hypothesis: an update". Current Opinion in Immunology. 19 (5): 547–52. doi:10.1016/j.coi.2007.07.009. PMID 17707623.
Wolfe K (May 2000). "Robustness--it's not where you think it is". Nature Genetics. 25 (1): 3–4. doi:10.1038/75560. PMID 10802639. S2CID 85257685.
McLysaght A, Makino T, Grayton HM, Tropeano M, Mitchell KJ, Vassos E, Collier DA (January 2014). "Ohnologs are overrepresented in pathogenic copy number mutations". Proceedings of the National Academy of Sciences of the United States of America. 111 (1): 361–6. Bibcode:2014PNAS..111..361M. doi:10.1073/pnas.1309324111. PMC 3890797. PMID 24368850.
Makino T, McLysaght A (May 2010). "Ohnologs in the human genome are dosage balanced and frequently associated with disease". Proceedings of the National Academy of Sciences of the United States of America. 107 (20): 9270–4. Bibcode:2010PNAS..107.9270M. doi:10.1073/pnas.0914697107. PMC 2889102. PMID 20439718.
Ruddle FH, Bentley KL, Murtha MT, Risch N (1994). "Gene loss and gain in the evolution of the vertebrates". Development. 1994: 155–61. doi:10.1242/dev.1994.Supplement.155. PMID 7579516.
Pébusque MJ, Coulier F, Birnbaum D, Pontarotti P (September 1998). "Ancient large-scale genome duplications: phylogenetic and linkage analyses shed light on chordate genome evolution". Molecular Biology and Evolution. 15 (9): 1145–59. doi:10.1093/oxfordjournals.molbev.a026022. PMID 9729879.
Larsson TA, Olsson F, Sundstrom G, Lundin LG, Brenner S, Venkatesh B, Larhammar D (June 2008). "Early vertebrate chromosome duplications and the evolution of the neuropeptide Y receptor gene regions". BMC Evolutionary Biology. 8 (1): 184. Bibcode:2008BMCEE...8..184L. doi:10.1186/1471-2148-8-184. PMC 2453138. PMID 18578868.
Pollard SL, Holland PW (September 2000). "Evidence for 14 homeobox gene clusters in human genome ancestry". Current Biology. 10 (17): 1059–62. Bibcode:2000CBio...10.1059P. doi:10.1016/S0960-9822(00)00676-X. PMID 10996074. S2CID 32135432.
Mulley JF, Chiu CH, Holland PW (July 2006). "Breakup of a homeobox cluster after genome duplication in teleosts". Proceedings of the National Academy of Sciences of the United States of America. 103 (27): 10369–10372. Bibcode:2006PNAS..10310369M. doi:10.1073/pnas.0600341103. PMC 1502464. PMID 16801555.
Flajnik MF, Kasahara M (September 2001). "Comparative genomics of the MHC: glimpses into the evolution of the adaptive immune system". Immunity. 15 (3): 351–62. doi:10.1016/S1074-7613(01)00198-4. PMID 11567626.
McLysaght A, Hokamp K, Wolfe KH (June 2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–4. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.

harvard.edu

ui.adsabs.harvard.edu

Hughes, Austin L. (1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Schmidtke, Jörg; Weiler, Conrad; Kunz, Brigitte; Engel, Wolfgang (1977). "Isozymes of a tunicate and a cephalochordate as a test of polyploidisation in chordate evolution". Nature. 266 (5602): 532–533. Bibcode:1977Natur.266..532S. doi:10.1038/266532a0. PMID 859619. S2CID 4255382.
Delsuc, F; Brinkmann, H; Chourrout, D; Philippe, H (2006). "Tunicates and not cephalochordates are the closest living relatives of vertebrates" (PDF). Nature. 439 (7079): 965–8. Bibcode:2006Natur.439..965D. doi:10.1038/nature04336. PMID 16495997. S2CID 4382758.
Garcia-Fernández, J; Holland, PW (Aug 18, 1994). "Archetypal organization of the amphioxus Hox gene cluster". Nature. 370 (6490): 563–6. Bibcode:1994Natur.370..563G. doi:10.1038/370563a0. PMID 7914353. S2CID 4329696.
Hughes, AL (May 1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Spring, Jürg (1997). "Vertebrate evolution by interspecific hybridisation – are we polyploid?". FEBS Letters. 400 (1): 2–8. Bibcode:1997FEBSL.400....2S. doi:10.1016/S0014-5793(96)01351-8. PMID 9000502.
Putnam, NH; Butts, T; Ferrier, DE; Furlong, RF; Hellsten, U; Kawashima, T; Robinson-Rechavi, M; Shoguchi, E; Terry, A; Yu, JK; Benito-Gutiérrez, EL; Dubchak, I; Garcia-Fernàndez, J; Gibson-Brown, JJ; Grigoriev, IV; Horton, AC; de Jong, PJ; Jurka, J; Kapitonov, VV; Kohara, Y; Kuroki, Y; Lindquist, E; Lucas, S; Osoegawa, K; Pennacchio, LA; Salamov, AA; Satou, Y; Sauka-Spengler, T; Schmutz, J; Shin-I, T; Toyoda, A; Bronner-Fraser, M; Fujiyama, A; Holland, LZ; Holland, PW; Satoh, N; Rokhsar, DS (2008). "The amphioxus genome and the evolution of the chordate karyotype". Nature. 453 (7198): 1064–71. Bibcode:2008Natur.453.1064P. doi:10.1038/nature06967. PMID 18563158.
McLysaght A, Makino T, Grayton HM, Tropeano M, Mitchell KJ, Vassos E, Collier DA (January 2014). "Ohnologs are overrepresented in pathogenic copy number mutations". Proceedings of the National Academy of Sciences of the United States of America. 111 (1): 361–6. Bibcode:2014PNAS..111..361M. doi:10.1073/pnas.1309324111. PMC 3890797. PMID 24368850.
Makino T, McLysaght A (May 2010). "Ohnologs in the human genome are dosage balanced and frequently associated with disease". Proceedings of the National Academy of Sciences of the United States of America. 107 (20): 9270–4. Bibcode:2010PNAS..107.9270M. doi:10.1073/pnas.0914697107. PMC 2889102. PMID 20439718.
Larsson TA, Olsson F, Sundstrom G, Lundin LG, Brenner S, Venkatesh B, Larhammar D (June 2008). "Early vertebrate chromosome duplications and the evolution of the neuropeptide Y receptor gene regions". BMC Evolutionary Biology. 8 (1): 184. Bibcode:2008BMCEE...8..184L. doi:10.1186/1471-2148-8-184. PMC 2453138. PMID 18578868.
Pollard SL, Holland PW (September 2000). "Evidence for 14 homeobox gene clusters in human genome ancestry". Current Biology. 10 (17): 1059–62. Bibcode:2000CBio...10.1059P. doi:10.1016/S0960-9822(00)00676-X. PMID 10996074. S2CID 32135432.
Mulley JF, Chiu CH, Holland PW (July 2006). "Breakup of a homeobox cluster after genome duplication in teleosts". Proceedings of the National Academy of Sciences of the United States of America. 103 (27): 10369–10372. Bibcode:2006PNAS..10310369M. doi:10.1073/pnas.0600341103. PMC 1502464. PMID 16801555.

nih.gov

pubmed.ncbi.nlm.nih.gov

Hokamp, K; McLysaght, A; Wolfe, KH (2003). "The 2R hypothesis and the human genome sequence". Journal of Structural and Functional Genomics. 3 (1–4): 95–110. doi:10.1023/A:1022661917301. PMID 12836689. S2CID 18856088.
Holland, PW; Garcia-Fernàndez, J; Williams, NA; Sidow, A (1994). "Gene duplications and the origins of vertebrate development". Development. Supplement: 125–33. PMID 7579513.
Hughes, Austin L. (1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Makalowski, Wojciech (2001). "Are we polyploids? A brief history of one hypothesis". Genome Research. 11 (5): 667–70. doi:10.1101/gr.188801. PMID 11337465.
Schmidtke, Jörg; Weiler, Conrad; Kunz, Brigitte; Engel, Wolfgang (1977). "Isozymes of a tunicate and a cephalochordate as a test of polyploidisation in chordate evolution". Nature. 266 (5602): 532–533. Bibcode:1977Natur.266..532S. doi:10.1038/266532a0. PMID 859619. S2CID 4255382.
Holland, PW (2003). "More genes in vertebrates?". Journal of Structural and Functional Genomics. 3 (1–4): 75–84. doi:10.1023/a:1022656931587. PMID 12836687. S2CID 35418674.
Delsuc, F; Brinkmann, H; Chourrout, D; Philippe, H (2006). "Tunicates and not cephalochordates are the closest living relatives of vertebrates" (PDF). Nature. 439 (7079): 965–8. Bibcode:2006Natur.439..965D. doi:10.1038/nature04336. PMID 16495997. S2CID 4382758.
Lundin, LG (April 1993). "Evolution of the vertebrate genome as reflected in paralogous chromosomal regions in man and the house mouse". Genomics. 16 (1): 1–19. doi:10.1006/geno.1993.1133. PMID 8486346.
Garcia-Fernández, J; Holland, PW (Aug 18, 1994). "Archetypal organization of the amphioxus Hox gene cluster". Nature. 370 (6490): 563–6. Bibcode:1994Natur.370..563G. doi:10.1038/370563a0. PMID 7914353. S2CID 4329696.
Dehal, Paramvir; Boore, Jeffrey L. (2005). "Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate". PLOS Biology. 3 (10): e314. doi:10.1371/journal.pbio.0030314. PMC 1197285. PMID 16128622.
Hughes, AL (May 1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Hughes, Austin L.; Friedman, Robert (2003). "2R or not 2R: Testing hypotheses of genome duplication in early vertebrates". Journal of Structural and Functional Genomics. 3 (1/4): 85–93. doi:10.1023/A:1022681600462. PMID 12836688. S2CID 835565.
Furlong, RF; Holland, PW (2002). "Were vertebrates octoploid?". Philosophical Transactions of the Royal Society B. 357 (1420): 531–44. doi:10.1098/rstb.2001.1035. PMC 1692965. PMID 12028790.
Lynch, VJ; Wagner, GP (2009). "Multiple chromosomal rearrangements structured the ancestral vertebrate Hox-bearing protochromosomes". PLOS Genetics. 5 (1): e1000349. doi:10.1371/journal.pgen.1000349. PMC 2622764. PMID 19165336.
Larhammar, D.; Josephson, M (2002). "The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications". Genome Research. 12 (1): 1910–1920. doi:10.1101/gr.445702. PMC 187569. PMID 12466295.
Spring, Jürg (1997). "Vertebrate evolution by interspecific hybridisation – are we polyploid?". FEBS Letters. 400 (1): 2–8. Bibcode:1997FEBSL.400....2S. doi:10.1016/S0014-5793(96)01351-8. PMID 9000502.
Abi-Rached, L; Gilles, A; Shiina, T; Pontarotti, P; Inoko, H (2002). "Evidence of en bloc duplication in vertebrate genomes". Nature Genetics. 31 (1): 100–5. doi:10.1038/ng855. PMID 11967531. S2CID 8516649.
Castro, LF; Holland, PW (Sep–Oct 2003). "Chromosomal mapping of ANTP class homeobox genes in amphioxus: piecing together ancestral genomes". Evolution & Development. 5 (5): 459–65. doi:10.1046/j.1525-142x.2003.03052.x. PMID 12950625. S2CID 38083087.
McLysaght, Aoife; Hokamp, Karsten; Wolfe, Kenneth H. (2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–204. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.
Putnam, NH; Butts, T; Ferrier, DE; Furlong, RF; Hellsten, U; Kawashima, T; Robinson-Rechavi, M; Shoguchi, E; Terry, A; Yu, JK; Benito-Gutiérrez, EL; Dubchak, I; Garcia-Fernàndez, J; Gibson-Brown, JJ; Grigoriev, IV; Horton, AC; de Jong, PJ; Jurka, J; Kapitonov, VV; Kohara, Y; Kuroki, Y; Lindquist, E; Lucas, S; Osoegawa, K; Pennacchio, LA; Salamov, AA; Satou, Y; Sauka-Spengler, T; Schmutz, J; Shin-I, T; Toyoda, A; Bronner-Fraser, M; Fujiyama, A; Holland, LZ; Holland, PW; Satoh, N; Rokhsar, DS (2008). "The amphioxus genome and the evolution of the chordate karyotype". Nature. 453 (7198): 1064–71. Bibcode:2008Natur.453.1064P. doi:10.1038/nature06967. PMID 18563158.
Kasahara, Masanori (2007). "The 2R hypothesis: an update". Current Opinion in Immunology. 19 (5): 547–52. doi:10.1016/j.coi.2007.07.009. PMID 17707623.
Wolfe K (May 2000). "Robustness--it's not where you think it is". Nature Genetics. 25 (1): 3–4. doi:10.1038/75560. PMID 10802639. S2CID 85257685.
McLysaght A, Makino T, Grayton HM, Tropeano M, Mitchell KJ, Vassos E, Collier DA (January 2014). "Ohnologs are overrepresented in pathogenic copy number mutations". Proceedings of the National Academy of Sciences of the United States of America. 111 (1): 361–6. Bibcode:2014PNAS..111..361M. doi:10.1073/pnas.1309324111. PMC 3890797. PMID 24368850.
Makino T, McLysaght A (May 2010). "Ohnologs in the human genome are dosage balanced and frequently associated with disease". Proceedings of the National Academy of Sciences of the United States of America. 107 (20): 9270–4. Bibcode:2010PNAS..107.9270M. doi:10.1073/pnas.0914697107. PMC 2889102. PMID 20439718.
Ruddle FH, Bentley KL, Murtha MT, Risch N (1994). "Gene loss and gain in the evolution of the vertebrates". Development. 1994: 155–61. doi:10.1242/dev.1994.Supplement.155. PMID 7579516.
Pébusque MJ, Coulier F, Birnbaum D, Pontarotti P (September 1998). "Ancient large-scale genome duplications: phylogenetic and linkage analyses shed light on chordate genome evolution". Molecular Biology and Evolution. 15 (9): 1145–59. doi:10.1093/oxfordjournals.molbev.a026022. PMID 9729879.
Larsson TA, Olsson F, Sundstrom G, Lundin LG, Brenner S, Venkatesh B, Larhammar D (June 2008). "Early vertebrate chromosome duplications and the evolution of the neuropeptide Y receptor gene regions". BMC Evolutionary Biology. 8 (1): 184. Bibcode:2008BMCEE...8..184L. doi:10.1186/1471-2148-8-184. PMC 2453138. PMID 18578868.
Pollard SL, Holland PW (September 2000). "Evidence for 14 homeobox gene clusters in human genome ancestry". Current Biology. 10 (17): 1059–62. Bibcode:2000CBio...10.1059P. doi:10.1016/S0960-9822(00)00676-X. PMID 10996074. S2CID 32135432.
Mulley JF, Chiu CH, Holland PW (July 2006). "Breakup of a homeobox cluster after genome duplication in teleosts". Proceedings of the National Academy of Sciences of the United States of America. 103 (27): 10369–10372. Bibcode:2006PNAS..10310369M. doi:10.1073/pnas.0600341103. PMC 1502464. PMID 16801555.
Flajnik MF, Kasahara M (September 2001). "Comparative genomics of the MHC: glimpses into the evolution of the adaptive immune system". Immunity. 15 (3): 351–62. doi:10.1016/S1074-7613(01)00198-4. PMID 11567626.
McLysaght A, Hokamp K, Wolfe KH (June 2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–4. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.

ncbi.nlm.nih.gov

Dehal, Paramvir; Boore, Jeffrey L. (2005). "Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate". PLOS Biology. 3 (10): e314. doi:10.1371/journal.pbio.0030314. PMC 1197285. PMID 16128622.
Furlong, RF; Holland, PW (2002). "Were vertebrates octoploid?". Philosophical Transactions of the Royal Society B. 357 (1420): 531–44. doi:10.1098/rstb.2001.1035. PMC 1692965. PMID 12028790.
Lynch, VJ; Wagner, GP (2009). "Multiple chromosomal rearrangements structured the ancestral vertebrate Hox-bearing protochromosomes". PLOS Genetics. 5 (1): e1000349. doi:10.1371/journal.pgen.1000349. PMC 2622764. PMID 19165336.
Larhammar, D.; Josephson, M (2002). "The Human Hox-bearing Chromosome Regions Did Arise by Block or Chromosome (or Even Genome) Duplications". Genome Research. 12 (1): 1910–1920. doi:10.1101/gr.445702. PMC 187569. PMID 12466295.
McLysaght A, Makino T, Grayton HM, Tropeano M, Mitchell KJ, Vassos E, Collier DA (January 2014). "Ohnologs are overrepresented in pathogenic copy number mutations". Proceedings of the National Academy of Sciences of the United States of America. 111 (1): 361–6. Bibcode:2014PNAS..111..361M. doi:10.1073/pnas.1309324111. PMC 3890797. PMID 24368850.
Makino T, McLysaght A (May 2010). "Ohnologs in the human genome are dosage balanced and frequently associated with disease". Proceedings of the National Academy of Sciences of the United States of America. 107 (20): 9270–4. Bibcode:2010PNAS..107.9270M. doi:10.1073/pnas.0914697107. PMC 2889102. PMID 20439718.
Larsson TA, Olsson F, Sundstrom G, Lundin LG, Brenner S, Venkatesh B, Larhammar D (June 2008). "Early vertebrate chromosome duplications and the evolution of the neuropeptide Y receptor gene regions". BMC Evolutionary Biology. 8 (1): 184. Bibcode:2008BMCEE...8..184L. doi:10.1186/1471-2148-8-184. PMC 2453138. PMID 18578868.
Mulley JF, Chiu CH, Holland PW (July 2006). "Breakup of a homeobox cluster after genome duplication in teleosts". Proceedings of the National Academy of Sciences of the United States of America. 103 (27): 10369–10372. Bibcode:2006PNAS..10310369M. doi:10.1073/pnas.0600341103. PMC 1502464. PMID 16801555.

semanticscholar.org

api.semanticscholar.org

Hokamp, K; McLysaght, A; Wolfe, KH (2003). "The 2R hypothesis and the human genome sequence". Journal of Structural and Functional Genomics. 3 (1–4): 95–110. doi:10.1023/A:1022661917301. PMID 12836689. S2CID 18856088.
Hughes, Austin L. (1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Schmidtke, Jörg; Weiler, Conrad; Kunz, Brigitte; Engel, Wolfgang (1977). "Isozymes of a tunicate and a cephalochordate as a test of polyploidisation in chordate evolution". Nature. 266 (5602): 532–533. Bibcode:1977Natur.266..532S. doi:10.1038/266532a0. PMID 859619. S2CID 4255382.
Holland, PW (2003). "More genes in vertebrates?". Journal of Structural and Functional Genomics. 3 (1–4): 75–84. doi:10.1023/a:1022656931587. PMID 12836687. S2CID 35418674.
Delsuc, F; Brinkmann, H; Chourrout, D; Philippe, H (2006). "Tunicates and not cephalochordates are the closest living relatives of vertebrates" (PDF). Nature. 439 (7079): 965–8. Bibcode:2006Natur.439..965D. doi:10.1038/nature04336. PMID 16495997. S2CID 4382758.
Garcia-Fernández, J; Holland, PW (Aug 18, 1994). "Archetypal organization of the amphioxus Hox gene cluster". Nature. 370 (6490): 563–6. Bibcode:1994Natur.370..563G. doi:10.1038/370563a0. PMID 7914353. S2CID 4329696.
Hughes, AL (May 1999). "Phylogenies of developmentally important proteins do not support the hypothesis of two rounds of genome duplication early in vertebrate history". Journal of Molecular Evolution. 48 (5): 565–76. Bibcode:1999JMolE..48..565H. doi:10.1007/PL00006499. PMID 10198122. S2CID 24897399.
Hughes, Austin L.; Friedman, Robert (2003). "2R or not 2R: Testing hypotheses of genome duplication in early vertebrates". Journal of Structural and Functional Genomics. 3 (1/4): 85–93. doi:10.1023/A:1022681600462. PMID 12836688. S2CID 835565.
Abi-Rached, L; Gilles, A; Shiina, T; Pontarotti, P; Inoko, H (2002). "Evidence of en bloc duplication in vertebrate genomes". Nature Genetics. 31 (1): 100–5. doi:10.1038/ng855. PMID 11967531. S2CID 8516649.
Castro, LF; Holland, PW (Sep–Oct 2003). "Chromosomal mapping of ANTP class homeobox genes in amphioxus: piecing together ancestral genomes". Evolution & Development. 5 (5): 459–65. doi:10.1046/j.1525-142x.2003.03052.x. PMID 12950625. S2CID 38083087.
McLysaght, Aoife; Hokamp, Karsten; Wolfe, Kenneth H. (2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–204. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.
Wolfe K (May 2000). "Robustness--it's not where you think it is". Nature Genetics. 25 (1): 3–4. doi:10.1038/75560. PMID 10802639. S2CID 85257685.
Pollard SL, Holland PW (September 2000). "Evidence for 14 homeobox gene clusters in human genome ancestry". Current Biology. 10 (17): 1059–62. Bibcode:2000CBio...10.1059P. doi:10.1016/S0960-9822(00)00676-X. PMID 10996074. S2CID 32135432.
McLysaght A, Hokamp K, Wolfe KH (June 2002). "Extensive genomic duplication during early chordate evolution". Nature Genetics. 31 (2): 200–4. doi:10.1038/ng884. PMID 12032567. S2CID 8263376.