CRISPR-associated transposons (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "CRISPR-associated transposons" in English language version.

refsWebsite

Global rank English rank

35nih.gov

4^th place

19doi.org

2^nd place

5harvard.edu

18^th place

17^th place

4semanticscholar.org

11^th place

8^th place

doi.org

Peters JE, Makarova KS, Shmakov S, Koonin EV (August 2017). "Recruitment of CRISPR-Cas systems by Tn7-like transposons". Proceedings of the National Academy of Sciences of the United States of America. 114 (35): E7358 – E7366. Bibcode:2017PNAS..114E7358P. doi:10.1073/pnas.1709035114. PMC 5584455. PMID 28811374.
Faure G, Shmakov SA, Yan WX, Cheng DR, Scott DA, Peters JE, et al. (August 2019). "CRISPR-Cas in mobile genetic elements: counter-defence and beyond". Nature Reviews. Microbiology. 17 (8): 513–525. doi:10.1038/s41579-019-0204-7. PMC 11165670. PMID 31165781. S2CID 174809341.
Strecker J, Ladha A, Gardner Z, Schmid-Burgk JL, Makarova KS, Koonin EV, Zhang F (July 2019). "RNA-guided DNA insertion with CRISPR-associated transposases". Science. 365 (6448): 48–53. Bibcode:2019Sci...365...48S. doi:10.1126/science.aax9181. PMC 6659118. PMID 31171706.
Rybarski JR, Hu K, Hill AM, Wilke CO, Finkelstein IJ (December 2021). "Metagenomic discovery of CRISPR-associated transposons". Proceedings of the National Academy of Sciences of the United States of America. 118 (49). Bibcode:2021PNAS..11812279R. doi:10.1073/pnas.2112279118. PMC 8670466. PMID 34845024.
Benler S, Faure G, Altae-Tran H, Shmakov S, Zheng F, Koonin E (December 2021). Giovannoni SJ (ed.). "Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes". mBio. 12 (6): e0293821. doi:10.1128/mBio.02938-21. PMC 8649781. PMID 34872347.
Klompe SE, Jaber N, Beh LY, Mohabir JT, Bernheim A, Sternberg SH (February 2022). "Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons". Molecular Cell. 82 (3): 616–628.e5. doi:10.1016/j.molcel.2021.12.021. PMC 8849592. PMID 35051352.
Klompe SE, Vo PL, Halpin-Healy TS, Sternberg SH (July 2019). "Transposon-encoded CRISPR-Cas systems direct RNA-guided DNA integration". Nature. 571 (7764): 219–225. doi:10.1038/s41586-019-1323-z. PMID 31189177. S2CID 189817057.
Kaczmarska Z, Czarnocki-Cieciura M, Górecka-Minakowska KM, Wingo RJ, Jackiewicz J, Zajko W, et al. (July 2022). "Structural basis of transposon end recognition explains central features of Tn7 transposition systems". Molecular Cell. 82 (14): 2618–2632.e7. doi:10.1016/j.molcel.2022.05.005. PMC 9308760. PMID 35654042.
Halpin-Healy TS, Klompe SE, Sternberg SH, Fernández IS (January 2020). "Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system". Nature. 577 (7789): 271–274. doi:10.1038/s41586-019-1849-0. PMID 31853065. S2CID 209410376.
Tou CJ, Orr B, Kleinstiver BP (July 2023). "Precise cut-and-paste DNA insertion using engineered type V-K CRISPR-associated transposases". Nature Biotechnology. 41 (7): 968–979. doi:10.1038/s41587-022-01574-x. PMID 36593413. S2CID 255464426.
Hoffmann FT, Kim M, Beh LY, Wang J, Vo PL, Gelsinger DR, et al. (September 2022). "Selective TnsC recruitment enhances the fidelity of RNA-guided transposition". Nature. 609 (7926): 384–393. Bibcode:2022Natur.609..384H. doi:10.1038/s41586-022-05059-4. PMC 10583602. PMID 36002573.
Roberts A, Nethery MA, Barrangou R (November 2022). "Functional characterization of diverse type I-F CRISPR-associated transposons". Nucleic Acids Research. 50 (20): 11670–11681. doi:10.1093/nar/gkac985. PMC 9723613. PMID 36384163.
Petassi MT, Hsieh SC, Peters JE (December 2020). "Guide RNA Categorization Enables Target Site Choice in Tn7-CRISPR-Cas Transposons". Cell. 183 (7): 1757–1771.e18. doi:10.1016/j.cell.2020.11.005. PMC 7770071. PMID 33271061.
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M (November 2021). "Target site selection and remodelling by type V CRISPR-transposon systems". Nature. 599 (7885): 497–502. Bibcode:2021Natur.599..497Q. doi:10.1038/s41586-021-04030-z. PMC 7613401. PMID 34759315.
Saito M, Ladha A, Strecker J, Faure G, Neumann E, Altae-Tran H, et al. (April 2021). "Dual modes of CRISPR-associated transposon homing". Cell. 184 (9): 2441–2453.e18. doi:10.1016/j.cell.2021.03.006. PMC 8276595. PMID 33770501.
Vo PL, Ronda C, Klompe SE, Chen EE, Acree C, Wang HH, Sternberg SH (April 2021). "CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering". Nature Biotechnology. 39 (4): 480–489. doi:10.1038/s41587-020-00745-y. PMC 10583764. PMID 33230293.
Rubin BE, Diamond S, Cress BF, Crits-Christoph A, Lou YC, Borges AL, et al. (January 2022). "Species- and site-specific genome editing in complex bacterial communities". Nature Microbiology. 7 (1): 34–47. doi:10.1038/s41564-021-01014-7. PMC 9261505. PMID 34873292.
Trujillo Rodríguez L, Ellington AJ, Reisch CR, Chevrette MG (July 2023). "CRISPR-Associated Transposase for Targeted Mutagenesis in Diverse Proteobacteria". ACS Synthetic Biology. 12 (7): 1989–2003. doi:10.1021/acssynbio.3c00065. PMC 10367135. PMID 37368499.
Lampe GD, King RT, Halpin-Healy TS, Klompe SE, Hogan MI, Vo PL, et al. (March 2023). "Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases". Nature Biotechnology. 42 (1): 87–98. doi:10.1038/s41587-023-01748-1. PMC 10620015. PMID 36991112.

harvard.edu

ui.adsabs.harvard.edu

Peters JE, Makarova KS, Shmakov S, Koonin EV (August 2017). "Recruitment of CRISPR-Cas systems by Tn7-like transposons". Proceedings of the National Academy of Sciences of the United States of America. 114 (35): E7358 – E7366. Bibcode:2017PNAS..114E7358P. doi:10.1073/pnas.1709035114. PMC 5584455. PMID 28811374.
Strecker J, Ladha A, Gardner Z, Schmid-Burgk JL, Makarova KS, Koonin EV, Zhang F (July 2019). "RNA-guided DNA insertion with CRISPR-associated transposases". Science. 365 (6448): 48–53. Bibcode:2019Sci...365...48S. doi:10.1126/science.aax9181. PMC 6659118. PMID 31171706.
Rybarski JR, Hu K, Hill AM, Wilke CO, Finkelstein IJ (December 2021). "Metagenomic discovery of CRISPR-associated transposons". Proceedings of the National Academy of Sciences of the United States of America. 118 (49). Bibcode:2021PNAS..11812279R. doi:10.1073/pnas.2112279118. PMC 8670466. PMID 34845024.
Hoffmann FT, Kim M, Beh LY, Wang J, Vo PL, Gelsinger DR, et al. (September 2022). "Selective TnsC recruitment enhances the fidelity of RNA-guided transposition". Nature. 609 (7926): 384–393. Bibcode:2022Natur.609..384H. doi:10.1038/s41586-022-05059-4. PMC 10583602. PMID 36002573.
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M (November 2021). "Target site selection and remodelling by type V CRISPR-transposon systems". Nature. 599 (7885): 497–502. Bibcode:2021Natur.599..497Q. doi:10.1038/s41586-021-04030-z. PMC 7613401. PMID 34759315.

nih.gov

pubmed.ncbi.nlm.nih.gov

Peters JE, Makarova KS, Shmakov S, Koonin EV (August 2017). "Recruitment of CRISPR-Cas systems by Tn7-like transposons". Proceedings of the National Academy of Sciences of the United States of America. 114 (35): E7358 – E7366. Bibcode:2017PNAS..114E7358P. doi:10.1073/pnas.1709035114. PMC 5584455. PMID 28811374.
Faure G, Shmakov SA, Yan WX, Cheng DR, Scott DA, Peters JE, et al. (August 2019). "CRISPR-Cas in mobile genetic elements: counter-defence and beyond". Nature Reviews. Microbiology. 17 (8): 513–525. doi:10.1038/s41579-019-0204-7. PMC 11165670. PMID 31165781. S2CID 174809341.
Strecker J, Ladha A, Gardner Z, Schmid-Burgk JL, Makarova KS, Koonin EV, Zhang F (July 2019). "RNA-guided DNA insertion with CRISPR-associated transposases". Science. 365 (6448): 48–53. Bibcode:2019Sci...365...48S. doi:10.1126/science.aax9181. PMC 6659118. PMID 31171706.
Rybarski JR, Hu K, Hill AM, Wilke CO, Finkelstein IJ (December 2021). "Metagenomic discovery of CRISPR-associated transposons". Proceedings of the National Academy of Sciences of the United States of America. 118 (49). Bibcode:2021PNAS..11812279R. doi:10.1073/pnas.2112279118. PMC 8670466. PMID 34845024.
Benler S, Faure G, Altae-Tran H, Shmakov S, Zheng F, Koonin E (December 2021). Giovannoni SJ (ed.). "Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes". mBio. 12 (6): e0293821. doi:10.1128/mBio.02938-21. PMC 8649781. PMID 34872347.
Klompe SE, Jaber N, Beh LY, Mohabir JT, Bernheim A, Sternberg SH (February 2022). "Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons". Molecular Cell. 82 (3): 616–628.e5. doi:10.1016/j.molcel.2021.12.021. PMC 8849592. PMID 35051352.
Klompe SE, Vo PL, Halpin-Healy TS, Sternberg SH (July 2019). "Transposon-encoded CRISPR-Cas systems direct RNA-guided DNA integration". Nature. 571 (7764): 219–225. doi:10.1038/s41586-019-1323-z. PMID 31189177. S2CID 189817057.
Kaczmarska Z, Czarnocki-Cieciura M, Górecka-Minakowska KM, Wingo RJ, Jackiewicz J, Zajko W, et al. (July 2022). "Structural basis of transposon end recognition explains central features of Tn7 transposition systems". Molecular Cell. 82 (14): 2618–2632.e7. doi:10.1016/j.molcel.2022.05.005. PMC 9308760. PMID 35654042.
Halpin-Healy TS, Klompe SE, Sternberg SH, Fernández IS (January 2020). "Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system". Nature. 577 (7789): 271–274. doi:10.1038/s41586-019-1849-0. PMID 31853065. S2CID 209410376.
Tou CJ, Orr B, Kleinstiver BP (July 2023). "Precise cut-and-paste DNA insertion using engineered type V-K CRISPR-associated transposases". Nature Biotechnology. 41 (7): 968–979. doi:10.1038/s41587-022-01574-x. PMID 36593413. S2CID 255464426.
Hoffmann FT, Kim M, Beh LY, Wang J, Vo PL, Gelsinger DR, et al. (September 2022). "Selective TnsC recruitment enhances the fidelity of RNA-guided transposition". Nature. 609 (7926): 384–393. Bibcode:2022Natur.609..384H. doi:10.1038/s41586-022-05059-4. PMC 10583602. PMID 36002573.
Roberts A, Nethery MA, Barrangou R (November 2022). "Functional characterization of diverse type I-F CRISPR-associated transposons". Nucleic Acids Research. 50 (20): 11670–11681. doi:10.1093/nar/gkac985. PMC 9723613. PMID 36384163.
Petassi MT, Hsieh SC, Peters JE (December 2020). "Guide RNA Categorization Enables Target Site Choice in Tn7-CRISPR-Cas Transposons". Cell. 183 (7): 1757–1771.e18. doi:10.1016/j.cell.2020.11.005. PMC 7770071. PMID 33271061.
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M (November 2021). "Target site selection and remodelling by type V CRISPR-transposon systems". Nature. 599 (7885): 497–502. Bibcode:2021Natur.599..497Q. doi:10.1038/s41586-021-04030-z. PMC 7613401. PMID 34759315.
Saito M, Ladha A, Strecker J, Faure G, Neumann E, Altae-Tran H, et al. (April 2021). "Dual modes of CRISPR-associated transposon homing". Cell. 184 (9): 2441–2453.e18. doi:10.1016/j.cell.2021.03.006. PMC 8276595. PMID 33770501.
Vo PL, Ronda C, Klompe SE, Chen EE, Acree C, Wang HH, Sternberg SH (April 2021). "CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering". Nature Biotechnology. 39 (4): 480–489. doi:10.1038/s41587-020-00745-y. PMC 10583764. PMID 33230293.
Rubin BE, Diamond S, Cress BF, Crits-Christoph A, Lou YC, Borges AL, et al. (January 2022). "Species- and site-specific genome editing in complex bacterial communities". Nature Microbiology. 7 (1): 34–47. doi:10.1038/s41564-021-01014-7. PMC 9261505. PMID 34873292.
Trujillo Rodríguez L, Ellington AJ, Reisch CR, Chevrette MG (July 2023). "CRISPR-Associated Transposase for Targeted Mutagenesis in Diverse Proteobacteria". ACS Synthetic Biology. 12 (7): 1989–2003. doi:10.1021/acssynbio.3c00065. PMC 10367135. PMID 37368499.
Lampe GD, King RT, Halpin-Healy TS, Klompe SE, Hogan MI, Vo PL, et al. (March 2023). "Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases". Nature Biotechnology. 42 (1): 87–98. doi:10.1038/s41587-023-01748-1. PMC 10620015. PMID 36991112.

ncbi.nlm.nih.gov

Peters JE, Makarova KS, Shmakov S, Koonin EV (August 2017). "Recruitment of CRISPR-Cas systems by Tn7-like transposons". Proceedings of the National Academy of Sciences of the United States of America. 114 (35): E7358 – E7366. Bibcode:2017PNAS..114E7358P. doi:10.1073/pnas.1709035114. PMC 5584455. PMID 28811374.
Faure G, Shmakov SA, Yan WX, Cheng DR, Scott DA, Peters JE, et al. (August 2019). "CRISPR-Cas in mobile genetic elements: counter-defence and beyond". Nature Reviews. Microbiology. 17 (8): 513–525. doi:10.1038/s41579-019-0204-7. PMC 11165670. PMID 31165781. S2CID 174809341.
Strecker J, Ladha A, Gardner Z, Schmid-Burgk JL, Makarova KS, Koonin EV, Zhang F (July 2019). "RNA-guided DNA insertion with CRISPR-associated transposases". Science. 365 (6448): 48–53. Bibcode:2019Sci...365...48S. doi:10.1126/science.aax9181. PMC 6659118. PMID 31171706.
Rybarski JR, Hu K, Hill AM, Wilke CO, Finkelstein IJ (December 2021). "Metagenomic discovery of CRISPR-associated transposons". Proceedings of the National Academy of Sciences of the United States of America. 118 (49). Bibcode:2021PNAS..11812279R. doi:10.1073/pnas.2112279118. PMC 8670466. PMID 34845024.
Benler S, Faure G, Altae-Tran H, Shmakov S, Zheng F, Koonin E (December 2021). Giovannoni SJ (ed.). "Cargo Genes of Tn7-Like Transposons Comprise an Enormous Diversity of Defense Systems, Mobile Genetic Elements, and Antibiotic Resistance Genes". mBio. 12 (6): e0293821. doi:10.1128/mBio.02938-21. PMC 8649781. PMID 34872347.
Klompe SE, Jaber N, Beh LY, Mohabir JT, Bernheim A, Sternberg SH (February 2022). "Evolutionary and mechanistic diversity of Type I-F CRISPR-associated transposons". Molecular Cell. 82 (3): 616–628.e5. doi:10.1016/j.molcel.2021.12.021. PMC 8849592. PMID 35051352.
Kaczmarska Z, Czarnocki-Cieciura M, Górecka-Minakowska KM, Wingo RJ, Jackiewicz J, Zajko W, et al. (July 2022). "Structural basis of transposon end recognition explains central features of Tn7 transposition systems". Molecular Cell. 82 (14): 2618–2632.e7. doi:10.1016/j.molcel.2022.05.005. PMC 9308760. PMID 35654042.
Hoffmann FT, Kim M, Beh LY, Wang J, Vo PL, Gelsinger DR, et al. (September 2022). "Selective TnsC recruitment enhances the fidelity of RNA-guided transposition". Nature. 609 (7926): 384–393. Bibcode:2022Natur.609..384H. doi:10.1038/s41586-022-05059-4. PMC 10583602. PMID 36002573.
Roberts A, Nethery MA, Barrangou R (November 2022). "Functional characterization of diverse type I-F CRISPR-associated transposons". Nucleic Acids Research. 50 (20): 11670–11681. doi:10.1093/nar/gkac985. PMC 9723613. PMID 36384163.
Petassi MT, Hsieh SC, Peters JE (December 2020). "Guide RNA Categorization Enables Target Site Choice in Tn7-CRISPR-Cas Transposons". Cell. 183 (7): 1757–1771.e18. doi:10.1016/j.cell.2020.11.005. PMC 7770071. PMID 33271061.
Querques I, Schmitz M, Oberli S, Chanez C, Jinek M (November 2021). "Target site selection and remodelling by type V CRISPR-transposon systems". Nature. 599 (7885): 497–502. Bibcode:2021Natur.599..497Q. doi:10.1038/s41586-021-04030-z. PMC 7613401. PMID 34759315.
Saito M, Ladha A, Strecker J, Faure G, Neumann E, Altae-Tran H, et al. (April 2021). "Dual modes of CRISPR-associated transposon homing". Cell. 184 (9): 2441–2453.e18. doi:10.1016/j.cell.2021.03.006. PMC 8276595. PMID 33770501.
Vo PL, Ronda C, Klompe SE, Chen EE, Acree C, Wang HH, Sternberg SH (April 2021). "CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering". Nature Biotechnology. 39 (4): 480–489. doi:10.1038/s41587-020-00745-y. PMC 10583764. PMID 33230293.
Rubin BE, Diamond S, Cress BF, Crits-Christoph A, Lou YC, Borges AL, et al. (January 2022). "Species- and site-specific genome editing in complex bacterial communities". Nature Microbiology. 7 (1): 34–47. doi:10.1038/s41564-021-01014-7. PMC 9261505. PMID 34873292.
Trujillo Rodríguez L, Ellington AJ, Reisch CR, Chevrette MG (July 2023). "CRISPR-Associated Transposase for Targeted Mutagenesis in Diverse Proteobacteria". ACS Synthetic Biology. 12 (7): 1989–2003. doi:10.1021/acssynbio.3c00065. PMC 10367135. PMID 37368499.
Lampe GD, King RT, Halpin-Healy TS, Klompe SE, Hogan MI, Vo PL, et al. (March 2023). "Targeted DNA integration in human cells without double-strand breaks using CRISPR-associated transposases". Nature Biotechnology. 42 (1): 87–98. doi:10.1038/s41587-023-01748-1. PMC 10620015. PMID 36991112.

semanticscholar.org

api.semanticscholar.org

Faure G, Shmakov SA, Yan WX, Cheng DR, Scott DA, Peters JE, et al. (August 2019). "CRISPR-Cas in mobile genetic elements: counter-defence and beyond". Nature Reviews. Microbiology. 17 (8): 513–525. doi:10.1038/s41579-019-0204-7. PMC 11165670. PMID 31165781. S2CID 174809341.
Klompe SE, Vo PL, Halpin-Healy TS, Sternberg SH (July 2019). "Transposon-encoded CRISPR-Cas systems direct RNA-guided DNA integration". Nature. 571 (7764): 219–225. doi:10.1038/s41586-019-1323-z. PMID 31189177. S2CID 189817057.
Halpin-Healy TS, Klompe SE, Sternberg SH, Fernández IS (January 2020). "Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system". Nature. 577 (7789): 271–274. doi:10.1038/s41586-019-1849-0. PMID 31853065. S2CID 209410376.
Tou CJ, Orr B, Kleinstiver BP (July 2023). "Precise cut-and-paste DNA insertion using engineered type V-K CRISPR-associated transposases". Nature Biotechnology. 41 (7): 968–979. doi:10.1038/s41587-022-01574-x. PMID 36593413. S2CID 255464426.