Candidatus Pelagibacter communis (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Candidatus Pelagibacter communis" in English language version.

refsWebsite

Global rank English rank

24nih.gov

4^th place

16doi.org

2^nd place

10harvard.edu

18^th place

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6semanticscholar.org

11^th place

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6web.archive.org

1^st place

2cict.fr

low place

1dsmz.de

4,644^th place

3,142^nd place

1ebi.ac.uk

5,849^th place

7,886^th place

1dtu.dk

low place

8,755^th place

1podcastdirectory.com

low place

1oregonstate.edu

2,041^st place

1,331^st place

1tufts.edu

155^th place

138^th place

1economist.com

254^th place

236^th place

cict.fr

bacterio.cict.fr

"Minimal standards for the description of new taxa". Archived from the original on 2013-01-27. Retrieved 2010-12-15.
Euzéby, J. P. (2010). "Introduction". List of Prokaryotic names with Standing in Nomenclature. Archived from the original on 2011-03-06. Retrieved 2010-12-16.

doi.org

Oren A. (2017). "A plea for linguistic accuracy—also for Candidatus taxa". Int J Syst Evol Microbiol. 67 (4): 1085–1094. doi:10.1099/ijsem.0.001715. PMID 27926819.
Michael S. Rappé; Stephanie A. Connon; Kevin L. Vergin; Stephen J. Giovannoni (2002). "Cultivation of the ubiquitous SAR11 marine bacterioplankton clade". Nature. 418 (6898): 630–633. Bibcode:2002Natur.418..630R. doi:10.1038/nature00917. PMID 12167859. S2CID 4352877.
List of Candidate species in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
R. M. Morris, et al. (2002). "SAR11 clade dominates ocean surface bacterioplankton communities". Nature. 420 (6917): 806–810. Bibcode:2002Natur.420..806M. doi:10.1038/nature01240. PMID 12490947. S2CID 4360530.
Stephen J. Giovannoni, H. James Tripp, et al. (2005). "Genome Streamlining in a Cosmopolitan Oceanic Bacterium". Science. 309 (5738): 1242–1245. Bibcode:2005Sci...309.1242G. doi:10.1126/science.1114057. PMID 16109880. S2CID 16221415.
Stingl, U.; Tripp, H. J.; Giovannoni, S. J. (2007). "Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site". The ISME Journal. 1 (4): 361–71. Bibcode:2007ISMEJ...1..361S. doi:10.1038/ismej.2007.49. PMID 18043647.
H. James Tripp; Joshua B. Kitner; Michael S. Schwalbach; John W. H. Dacey; et al. (April 2008). "SAR11 marine bacteria require exogenous reduced sulfur for growth". Nature. 452 (7188): 741–4. Bibcode:2008Natur.452..741T. doi:10.1038/nature06776. PMID 18337719. S2CID 205212536.
Giovannoni Stephen J.; Stingl Ulrich (2005). "Molecular diversity and ecology of microbial plankton". Nature. 437 (7057): 343–348. Bibcode:2005Natur.437..343G. doi:10.1038/nature04158. PMID 16163344. S2CID 4349881.
Carini, Paul; et al. (2012). "Nutrient requirements for growth of the extreme oligotroph "Candidatus Pelagibacter ubique" HTCC1062 on a defined medium". The ISME Journal. 7 (3): 592–602. doi:10.1038/ismej.2012.122. PMC 3578571. PMID 23096402.
Meyer MM, Ames TD, Smith DP, et al. (2009). "Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'". BMC Genomics. 10: 268. doi:10.1186/1471-2164-10-268. PMC 2704228. PMID 19531245.
Poiata E; Meyer MM; Ames TD; Breaker RR (November 2009). "A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria". RNA. 15 (11): 2046–56. doi:10.1261/rna.1824209. PMC 2764483. PMID 19776155.
H. James Tripp; Michael S. Schwalbach; Michelle M. Meyer; Joshua B. Kitner; et al. (January 2009). "Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11". Environmental Microbiology. 11 (1): 230–8. Bibcode:2009EnvMi..11..230T. doi:10.1111/j.1462-2920.2008.01758.x. PMC 2621071. PMID 19125817.
Steindler Laura; Schwalbach Michael S.; Smith Daniel P.; Chan Francis; et al. (2011). "Energy Starved "Candidatus Pelagibacter ubique" Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): 9999. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. PMC 3090418. PMID 21573025.
Murray, R. G. E.; Schleifer, K. H. (1994). "Taxonomic notes: a proposal for recording the properties of putative taxa of procaryotes". International Journal of Systematic and Evolutionary Microbiology. 44 (1): 174–176. doi:10.1099/00207713-44-1-174. PMID 8123559.
Thrash, J. C.; Boyd, A.; Huggett, M. J.; Grote, J.; Carini, P.; Yoder, R. J.; Robbertse, B.; Spatafora, J. W.; Rappé, M. S.; Giovannoni, S. J. (2011). "Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade". Scientific Reports. 1: 13. Bibcode:2011NatSR...1E..13T. doi:10.1038/srep00013. PMC 3216501. PMID 22355532.
Zhao, Y.; Temperton, B.; Thrash, J. C.; Schwalbach, M. S.; Vergin, K. L.; Landry, Z. C.; Ellisman, M.; Deerinck, T.; Sullivan, M. B.; Giovannoni, S. J. (2013). "Abundant SAR11 viruses in the ocean". Nature. 494 (7437): 357–360. Bibcode:2013Natur.494..357Z. doi:10.1038/nature11921. PMID 23407494. S2CID 4348619.

dsmz.de

lpsn.dsmz.de

List of Candidate species in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.

dtu.dk

cbs.dtu.dk

"Archived copy" (PDF). Archived (PDF) from the original on 2006-03-05. Retrieved 2012-02-02.{{cite web}}: CS1 maint: archived copy as title (link), Gauthier, Nicholas; Zinman, Guy; D'Antonio, Matteo; Abraham, Michael. Comparative Microbial Genomics DTU course. 2005.

ebi.ac.uk

"Candidatus Pelagibacter ubique." European Bioinformatics Institute. European Bioinformatics Institute, 2011. Web. 08 Jan. 2012. http://www.ebi.ac.uk/2can/genomes/bacteria/Candidatus_Pelagibacter_ubique.html Archived December 1, 2008, at the Wayback Machine

economist.com

"Flea market: A newly discovered virus may be the most abundant organism on the planet". The Economist. 16 February 2013. Retrieved 16 February 2013.

harvard.edu

ui.adsabs.harvard.edu

Michael S. Rappé; Stephanie A. Connon; Kevin L. Vergin; Stephen J. Giovannoni (2002). "Cultivation of the ubiquitous SAR11 marine bacterioplankton clade". Nature. 418 (6898): 630–633. Bibcode:2002Natur.418..630R. doi:10.1038/nature00917. PMID 12167859. S2CID 4352877.
R. M. Morris, et al. (2002). "SAR11 clade dominates ocean surface bacterioplankton communities". Nature. 420 (6917): 806–810. Bibcode:2002Natur.420..806M. doi:10.1038/nature01240. PMID 12490947. S2CID 4360530.
Stephen J. Giovannoni, H. James Tripp, et al. (2005). "Genome Streamlining in a Cosmopolitan Oceanic Bacterium". Science. 309 (5738): 1242–1245. Bibcode:2005Sci...309.1242G. doi:10.1126/science.1114057. PMID 16109880. S2CID 16221415.
Stingl, U.; Tripp, H. J.; Giovannoni, S. J. (2007). "Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site". The ISME Journal. 1 (4): 361–71. Bibcode:2007ISMEJ...1..361S. doi:10.1038/ismej.2007.49. PMID 18043647.
H. James Tripp; Joshua B. Kitner; Michael S. Schwalbach; John W. H. Dacey; et al. (April 2008). "SAR11 marine bacteria require exogenous reduced sulfur for growth". Nature. 452 (7188): 741–4. Bibcode:2008Natur.452..741T. doi:10.1038/nature06776. PMID 18337719. S2CID 205212536.
Giovannoni Stephen J.; Stingl Ulrich (2005). "Molecular diversity and ecology of microbial plankton". Nature. 437 (7057): 343–348. Bibcode:2005Natur.437..343G. doi:10.1038/nature04158. PMID 16163344. S2CID 4349881.
H. James Tripp; Michael S. Schwalbach; Michelle M. Meyer; Joshua B. Kitner; et al. (January 2009). "Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11". Environmental Microbiology. 11 (1): 230–8. Bibcode:2009EnvMi..11..230T. doi:10.1111/j.1462-2920.2008.01758.x. PMC 2621071. PMID 19125817.
Steindler Laura; Schwalbach Michael S.; Smith Daniel P.; Chan Francis; et al. (2011). "Energy Starved "Candidatus Pelagibacter ubique" Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): 9999. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. PMC 3090418. PMID 21573025.
Thrash, J. C.; Boyd, A.; Huggett, M. J.; Grote, J.; Carini, P.; Yoder, R. J.; Robbertse, B.; Spatafora, J. W.; Rappé, M. S.; Giovannoni, S. J. (2011). "Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade". Scientific Reports. 1: 13. Bibcode:2011NatSR...1E..13T. doi:10.1038/srep00013. PMC 3216501. PMID 22355532.
Zhao, Y.; Temperton, B.; Thrash, J. C.; Schwalbach, M. S.; Vergin, K. L.; Landry, Z. C.; Ellisman, M.; Deerinck, T.; Sullivan, M. B.; Giovannoni, S. J. (2013). "Abundant SAR11 viruses in the ocean". Nature. 494 (7437): 357–360. Bibcode:2013Natur.494..357Z. doi:10.1038/nature11921. PMID 23407494. S2CID 4348619.

nih.gov

pubmed.ncbi.nlm.nih.gov

Oren A. (2017). "A plea for linguistic accuracy—also for Candidatus taxa". Int J Syst Evol Microbiol. 67 (4): 1085–1094. doi:10.1099/ijsem.0.001715. PMID 27926819.
Michael S. Rappé; Stephanie A. Connon; Kevin L. Vergin; Stephen J. Giovannoni (2002). "Cultivation of the ubiquitous SAR11 marine bacterioplankton clade". Nature. 418 (6898): 630–633. Bibcode:2002Natur.418..630R. doi:10.1038/nature00917. PMID 12167859. S2CID 4352877.
R. M. Morris, et al. (2002). "SAR11 clade dominates ocean surface bacterioplankton communities". Nature. 420 (6917): 806–810. Bibcode:2002Natur.420..806M. doi:10.1038/nature01240. PMID 12490947. S2CID 4360530.
Stephen J. Giovannoni, H. James Tripp, et al. (2005). "Genome Streamlining in a Cosmopolitan Oceanic Bacterium". Science. 309 (5738): 1242–1245. Bibcode:2005Sci...309.1242G. doi:10.1126/science.1114057. PMID 16109880. S2CID 16221415.
Stingl, U.; Tripp, H. J.; Giovannoni, S. J. (2007). "Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site". The ISME Journal. 1 (4): 361–71. Bibcode:2007ISMEJ...1..361S. doi:10.1038/ismej.2007.49. PMID 18043647.
H. James Tripp; Joshua B. Kitner; Michael S. Schwalbach; John W. H. Dacey; et al. (April 2008). "SAR11 marine bacteria require exogenous reduced sulfur for growth". Nature. 452 (7188): 741–4. Bibcode:2008Natur.452..741T. doi:10.1038/nature06776. PMID 18337719. S2CID 205212536.
Giovannoni Stephen J.; Stingl Ulrich (2005). "Molecular diversity and ecology of microbial plankton". Nature. 437 (7057): 343–348. Bibcode:2005Natur.437..343G. doi:10.1038/nature04158. PMID 16163344. S2CID 4349881.
Carini, Paul; et al. (2012). "Nutrient requirements for growth of the extreme oligotroph "Candidatus Pelagibacter ubique" HTCC1062 on a defined medium". The ISME Journal. 7 (3): 592–602. doi:10.1038/ismej.2012.122. PMC 3578571. PMID 23096402.
Meyer MM, Ames TD, Smith DP, et al. (2009). "Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'". BMC Genomics. 10: 268. doi:10.1186/1471-2164-10-268. PMC 2704228. PMID 19531245.
Poiata E; Meyer MM; Ames TD; Breaker RR (November 2009). "A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria". RNA. 15 (11): 2046–56. doi:10.1261/rna.1824209. PMC 2764483. PMID 19776155.
H. James Tripp; Michael S. Schwalbach; Michelle M. Meyer; Joshua B. Kitner; et al. (January 2009). "Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11". Environmental Microbiology. 11 (1): 230–8. Bibcode:2009EnvMi..11..230T. doi:10.1111/j.1462-2920.2008.01758.x. PMC 2621071. PMID 19125817.
Steindler Laura; Schwalbach Michael S.; Smith Daniel P.; Chan Francis; et al. (2011). "Energy Starved "Candidatus Pelagibacter ubique" Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): 9999. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. PMC 3090418. PMID 21573025.
Lapage, S.; Sneath, P.; Lessel, E.; Skerman, V.; Seeliger, H.; Clark, W. (1992). International Code of Nomenclature of Bacteria: Bacteriological Code, 1990 Revision. Washington, D.C.: ASM Press. PMID 21089234.
Murray, R. G. E.; Schleifer, K. H. (1994). "Taxonomic notes: a proposal for recording the properties of putative taxa of procaryotes". International Journal of Systematic and Evolutionary Microbiology. 44 (1): 174–176. doi:10.1099/00207713-44-1-174. PMID 8123559.
Sneath, P. H. A (1992). Lapage, S. P.; Sneath, P. H. A.; Lessel, E. F.; Skerman, V. B. D.; Seeliger, H. P. R.; Clark, W. A. (eds.). International Code of Nomenclature of Bacteria. Washington, D.C.: American Society for Microbiology. ISBN 978-1-55581-039-9. PMID 21089234.
Thrash, J. C.; Boyd, A.; Huggett, M. J.; Grote, J.; Carini, P.; Yoder, R. J.; Robbertse, B.; Spatafora, J. W.; Rappé, M. S.; Giovannoni, S. J. (2011). "Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade". Scientific Reports. 1: 13. Bibcode:2011NatSR...1E..13T. doi:10.1038/srep00013. PMC 3216501. PMID 22355532.
Zhao, Y.; Temperton, B.; Thrash, J. C.; Schwalbach, M. S.; Vergin, K. L.; Landry, Z. C.; Ellisman, M.; Deerinck, T.; Sullivan, M. B.; Giovannoni, S. J. (2013). "Abundant SAR11 viruses in the ocean". Nature. 494 (7437): 357–360. Bibcode:2013Natur.494..357Z. doi:10.1038/nature11921. PMID 23407494. S2CID 4348619.

ncbi.nlm.nih.gov

Carini, Paul; et al. (2012). "Nutrient requirements for growth of the extreme oligotroph "Candidatus Pelagibacter ubique" HTCC1062 on a defined medium". The ISME Journal. 7 (3): 592–602. doi:10.1038/ismej.2012.122. PMC 3578571. PMID 23096402.
"Pelagibacter ubique genome". NCBI. Retrieved 27 November 2012.
Meyer MM, Ames TD, Smith DP, et al. (2009). "Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'". BMC Genomics. 10: 268. doi:10.1186/1471-2164-10-268. PMC 2704228. PMID 19531245.
Poiata E; Meyer MM; Ames TD; Breaker RR (November 2009). "A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria". RNA. 15 (11): 2046–56. doi:10.1261/rna.1824209. PMC 2764483. PMID 19776155.
H. James Tripp; Michael S. Schwalbach; Michelle M. Meyer; Joshua B. Kitner; et al. (January 2009). "Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11". Environmental Microbiology. 11 (1): 230–8. Bibcode:2009EnvMi..11..230T. doi:10.1111/j.1462-2920.2008.01758.x. PMC 2621071. PMID 19125817.
Steindler Laura; Schwalbach Michael S.; Smith Daniel P.; Chan Francis; et al. (2011). "Energy Starved "Candidatus Pelagibacter ubique" Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): 9999. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. PMC 3090418. PMID 21573025.
Thrash, J. C.; Boyd, A.; Huggett, M. J.; Grote, J.; Carini, P.; Yoder, R. J.; Robbertse, B.; Spatafora, J. W.; Rappé, M. S.; Giovannoni, S. J. (2011). "Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade". Scientific Reports. 1: 13. Bibcode:2011NatSR...1E..13T. doi:10.1038/srep00013. PMC 3216501. PMID 22355532.

oregonstate.edu

giovannonilab.science.oregonstate.edu

Giovannoni Lab http://giovannonilab.science.oregonstate.edu/ Archived 2011-07-20 at the Wayback Machine

podcastdirectory.com

View "Oceans of Microbes" http://www.podcastdirectory.com/podshows/4339749 Archived 2012-02-17 at the Wayback Machine

semanticscholar.org

api.semanticscholar.org

Michael S. Rappé; Stephanie A. Connon; Kevin L. Vergin; Stephen J. Giovannoni (2002). "Cultivation of the ubiquitous SAR11 marine bacterioplankton clade". Nature. 418 (6898): 630–633. Bibcode:2002Natur.418..630R. doi:10.1038/nature00917. PMID 12167859. S2CID 4352877.
R. M. Morris, et al. (2002). "SAR11 clade dominates ocean surface bacterioplankton communities". Nature. 420 (6917): 806–810. Bibcode:2002Natur.420..806M. doi:10.1038/nature01240. PMID 12490947. S2CID 4360530.
Stephen J. Giovannoni, H. James Tripp, et al. (2005). "Genome Streamlining in a Cosmopolitan Oceanic Bacterium". Science. 309 (5738): 1242–1245. Bibcode:2005Sci...309.1242G. doi:10.1126/science.1114057. PMID 16109880. S2CID 16221415.
H. James Tripp; Joshua B. Kitner; Michael S. Schwalbach; John W. H. Dacey; et al. (April 2008). "SAR11 marine bacteria require exogenous reduced sulfur for growth". Nature. 452 (7188): 741–4. Bibcode:2008Natur.452..741T. doi:10.1038/nature06776. PMID 18337719. S2CID 205212536.
Giovannoni Stephen J.; Stingl Ulrich (2005). "Molecular diversity and ecology of microbial plankton". Nature. 437 (7057): 343–348. Bibcode:2005Natur.437..343G. doi:10.1038/nature04158. PMID 16163344. S2CID 4349881.
Zhao, Y.; Temperton, B.; Thrash, J. C.; Schwalbach, M. S.; Vergin, K. L.; Landry, Z. C.; Ellisman, M.; Deerinck, T.; Sullivan, M. B.; Giovannoni, S. J. (2013). "Abundant SAR11 viruses in the ocean". Nature. 494 (7437): 357–360. Bibcode:2013Natur.494..357Z. doi:10.1038/nature11921. PMID 23407494. S2CID 4348619.

tufts.edu

perseus.tufts.edu

Gregory R. Crane. "pelagus entry in Perseus Digital Library". Perseus Digital Library Project. Tufts University. Retrieved 22 May 2011.

web.archive.org

"Candidatus Pelagibacter ubique." European Bioinformatics Institute. European Bioinformatics Institute, 2011. Web. 08 Jan. 2012. http://www.ebi.ac.uk/2can/genomes/bacteria/Candidatus_Pelagibacter_ubique.html Archived December 1, 2008, at the Wayback Machine
"Archived copy" (PDF). Archived (PDF) from the original on 2006-03-05. Retrieved 2012-02-02.{{cite web}}: CS1 maint: archived copy as title (link), Gauthier, Nicholas; Zinman, Guy; D'Antonio, Matteo; Abraham, Michael. Comparative Microbial Genomics DTU course. 2005.
View "Oceans of Microbes" http://www.podcastdirectory.com/podshows/4339749 Archived 2012-02-17 at the Wayback Machine
Giovannoni Lab http://giovannonilab.science.oregonstate.edu/ Archived 2011-07-20 at the Wayback Machine
"Minimal standards for the description of new taxa". Archived from the original on 2013-01-27. Retrieved 2010-12-15.
Euzéby, J. P. (2010). "Introduction". List of Prokaryotic names with Standing in Nomenclature. Archived from the original on 2011-03-06. Retrieved 2010-12-16.