CellProfiler (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "CellProfiler" in English language version.

refsWebsite

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3d1zymp9ayga15t.cloudfront.net

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3broadinstitute.org

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2openmicroscopy.org

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2cellprofiler.org

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broadinstitute.org

broadinstitute.org

"Imaging Platform". Broad Institute. 2018.

cimini-lab.broadinstitute.org

"Cimini Lab". Retrieved 2022-08-10.

carpenterlab.broadinstitute.org

"CellProfiler 4.0 Release: Improvements in speed, utility, and usability". carpenterlab.broadinstitute.org. Retrieved 2020-10-16.

cellprofiler.org

blog.cellprofiler.org

Carpenter, AE (2017-10-16). "CellProfiler 3.0 release: faster, better, and 3D". CellProfiler Blog.

forum.cellprofiler.org

"CellProfiler". forum.cellprofiler.org. Retrieved 2016-08-29.

d1zymp9ayga15t.cloudfront.net

"IdentifyPrimaryObjects". d1zymp9ayga15t.cloudfront.net. Retrieved 2016-08-29.
"ExportToSpreadsheet". d1zymp9ayga15t.cloudfront.net. Retrieved 2016-08-29.
"ExportToDatabase". d1zymp9ayga15t.cloudfront.net. Retrieved 2016-08-29.

doi.org

Carpenter AE, Jones TR, Lamprecht MR, Clarke C, Kang IH, Friman O, Guertin DA, Chang JH, Lindquist RA, Moffat J, Golland P, Sabatini DM (2006). "CellProfiler: image analysis software for identifying and quantifying cell phenotypes". Genome Biology. 7 (10): R100. doi:10.1186/gb-2006-7-10-r100. PMC 1794559. PMID 17076895.
Kamentsky L, Jones TR, Fraser A, Bray MA, Logan DJ, Madden KL, Ljosa V, Rueden C, Eliceiri KW, Carpenter AE (April 2011). "Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software". Bioinformatics. 27 (8): 1179–80. doi:10.1093/bioinformatics/btr095. PMC 3072555. PMID 21349861.
Lamprecht, Michael R.; Sabatini, David M.; Carpenter, Anne E. (2007-01-01). "CellProfiler: free, versatile software for automated biological image analysis". BioTechniques. 42 (1): 71–75. doi:10.2144/000112257. ISSN 0736-6205. PMID 17269487.
Singh, S.; Bray, M.-A.; Jones, T. R.; Carpenter, A. E. (2014-12-01). "Pipeline for illumination correction of images for high-throughput microscopy". Journal of Microscopy. 256 (3): 231–236. doi:10.1111/jmi.12178. ISSN 1365-2818. PMC 4359755. PMID 25228240.
Bray, Mark-Anthony; Carpenter, Anne E. (2015-01-01). "CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data". BMC Bioinformatics. 16: 368. doi:10.1186/s12859-015-0759-x. ISSN 1471-2105. PMC 4634901. PMID 26537300.
"What Is the Key Best Practice for Collaborating with a Computational Biologist?". Cell Systems. 3 (1): 7–11. 2016. doi:10.1016/j.cels.2016.07.006. PMID 27467242.

github.com

"CellProfiler wiki". GitHub. December 2016.
"CellProfiler/CellProfiler". GitHub. Retrieved 2016-08-29.
"CellProfiler/CellProfiler". GitHub. Retrieved 2016-08-29.

nih.gov

pubmed.ncbi.nlm.nih.gov

Carpenter AE, Jones TR, Lamprecht MR, Clarke C, Kang IH, Friman O, Guertin DA, Chang JH, Lindquist RA, Moffat J, Golland P, Sabatini DM (2006). "CellProfiler: image analysis software for identifying and quantifying cell phenotypes". Genome Biology. 7 (10): R100. doi:10.1186/gb-2006-7-10-r100. PMC 1794559. PMID 17076895.
Kamentsky L, Jones TR, Fraser A, Bray MA, Logan DJ, Madden KL, Ljosa V, Rueden C, Eliceiri KW, Carpenter AE (April 2011). "Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software". Bioinformatics. 27 (8): 1179–80. doi:10.1093/bioinformatics/btr095. PMC 3072555. PMID 21349861.
Lamprecht, Michael R.; Sabatini, David M.; Carpenter, Anne E. (2007-01-01). "CellProfiler: free, versatile software for automated biological image analysis". BioTechniques. 42 (1): 71–75. doi:10.2144/000112257. ISSN 0736-6205. PMID 17269487.
Singh, S.; Bray, M.-A.; Jones, T. R.; Carpenter, A. E. (2014-12-01). "Pipeline for illumination correction of images for high-throughput microscopy". Journal of Microscopy. 256 (3): 231–236. doi:10.1111/jmi.12178. ISSN 1365-2818. PMC 4359755. PMID 25228240.
Bray, Mark-Anthony; Carpenter, Anne E. (2015-01-01). "CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data". BMC Bioinformatics. 16: 368. doi:10.1186/s12859-015-0759-x. ISSN 1471-2105. PMC 4634901. PMID 26537300.
"What Is the Key Best Practice for Collaborating with a Computational Biologist?". Cell Systems. 3 (1): 7–11. 2016. doi:10.1016/j.cels.2016.07.006. PMID 27467242.

ncbi.nlm.nih.gov

Carpenter AE, Jones TR, Lamprecht MR, Clarke C, Kang IH, Friman O, Guertin DA, Chang JH, Lindquist RA, Moffat J, Golland P, Sabatini DM (2006). "CellProfiler: image analysis software for identifying and quantifying cell phenotypes". Genome Biology. 7 (10): R100. doi:10.1186/gb-2006-7-10-r100. PMC 1794559. PMID 17076895.
Kamentsky L, Jones TR, Fraser A, Bray MA, Logan DJ, Madden KL, Ljosa V, Rueden C, Eliceiri KW, Carpenter AE (April 2011). "Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software". Bioinformatics. 27 (8): 1179–80. doi:10.1093/bioinformatics/btr095. PMC 3072555. PMID 21349861.
Singh, S.; Bray, M.-A.; Jones, T. R.; Carpenter, A. E. (2014-12-01). "Pipeline for illumination correction of images for high-throughput microscopy". Journal of Microscopy. 256 (3): 231–236. doi:10.1111/jmi.12178. ISSN 1365-2818. PMC 4359755. PMID 25228240.
Bray, Mark-Anthony; Carpenter, Anne E. (2015-01-01). "CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data". BMC Bioinformatics. 16: 368. doi:10.1186/s12859-015-0759-x. ISSN 1471-2105. PMC 4634901. PMID 26537300.

openmicroscopy.org

"CellProfiler — Bio-Formats 5.2.1 documentation". www.openmicroscopy.org. Retrieved 2016-08-29.^{[permanent dead link]}
"Open Microscopy Environment". Retrieved 2018-05-07.

worldcat.org

Lamprecht, Michael R.; Sabatini, David M.; Carpenter, Anne E. (2007-01-01). "CellProfiler: free, versatile software for automated biological image analysis". BioTechniques. 42 (1): 71–75. doi:10.2144/000112257. ISSN 0736-6205. PMID 17269487.
Singh, S.; Bray, M.-A.; Jones, T. R.; Carpenter, A. E. (2014-12-01). "Pipeline for illumination correction of images for high-throughput microscopy". Journal of Microscopy. 256 (3): 231–236. doi:10.1111/jmi.12178. ISSN 1365-2818. PMC 4359755. PMID 25228240.
Bray, Mark-Anthony; Carpenter, Anne E. (2015-01-01). "CellProfiler Tracer: exploring and validating high-throughput, time-lapse microscopy image data". BMC Bioinformatics. 16: 368. doi:10.1186/s12859-015-0759-x. ISSN 1471-2105. PMC 4634901. PMID 26537300.