Colony-forming unit (English Wikipedia)

Goldman, Emanuel; Green, Lorrence H (24 August 2008). Practical Handbook of Microbiology, Second Edition (Google eBook) (Second ed.). USA: CRC Press, Taylor and Francis Group. p. 864. ISBN 978-0-8493-9365-5. Retrieved 2014-10-16.

doi.org

Amann, R I; Ludwig, W; Schleifer, K H (1995). "Phylogenetic identification and in situ detection of individual microbial cells without cultivation". Microbiological Reviews. 59 (1): 143–169. doi:10.1128/mr.59.1.143-169.1995. ISSN 0146-0749. PMC 239358. PMID 7535888.
Staley, James T.; Konopka, Allan (1985). "Measurement of In Situ Activities of Nonphotosynthetic Microorganisms in Aquatic and Terrestrial Habitats". Annual Review of Microbiology. 39 (1): 321–346. doi:10.1146/annurev.mi.39.100185.001541. ISSN 0066-4227. PMID 3904603.
Breed, RS; Dotterrer, WD (May 1916). "The Number of Colonies Allowable on Satisfactory Agar Plates". Journal of Bacteriology. 1 (3): 321–31. doi:10.1128/JB.1.3.321-331.1916. PMC 378655. PMID 16558698.
Schug, Angela R.; Bartel, Alexander; Meurer, Marita; Scholtzek, Anissa D.; Brombach, Julian; Hensel, Vivian; Fanning, Séamus; Schwarz, Stefan; Feßler, Andrea T. (1 December 2020). "Comparison of two methods for cell count determination in the course of biocide susceptibility testing". Veterinary Microbiology. 251: 108831. doi:10.1016/j.vetmic.2020.108831. PMID 33202368. S2CID 225308316.
Badieyan, Saeedesadat; Dilmaghani-Marand, Arezou; Hajipour, Mohammad Javad; Ameri, Ali; Razzaghi, Mohammad Reza; Rafii-Tabar, Hashem; Mahmoudi, Morteza; Sasanpour, Pezhman (17 July 2018). "Detection and Discrimination of Bacterial Colonies with Mueller Matrix Imaging". Scientific Reports. 8 (1): 10815. doi:10.1038/s41598-018-29059-5. ISSN 2045-2322. PMC 6050273. PMID 30018335.
Foladori, Paola; Laura, Bruni; Gianni, Andreottola; Giuliano, Ziglio (2007). "Effects of sonication on bacteria viability in wastewater treatment plants evaluated by flow cytometry—Fecal indicators, wastewater and activated sludge". Water Research. 41 (1): 235–243. doi:10.1016/j.watres.2006.08.021. PMID 17052743.
Whitmire, Jeannette M.; Merrell, D. Scott (2012), Houghton, JeanMarie (ed.), "Successful Culture Techniques for Helicobacter Species: General Culture Techniques for Helicobacter pylori", Helicobacter Species, Methods in Molecular Biology, vol. 921, Totowa, NJ: Humana Press, pp. 17–27, doi:10.1007/978-1-62703-005-2_4, ISBN 978-1-62703-004-5, PMID 23015487, retrieved 1 December 2023
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (2012-03-20). Bereswill, Stefan (ed.). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Khan, Arif ul Maula; Torelli, Angelo; Wolf, Ivo; Gretz, Norbert (8 May 2018). "AutoCellSeg: robust automatic colony forming unit (CFU)/cell analysis using adaptive image segmentation and easy-to-use post-editing techniques". Scientific Reports. 8 (1): 7302. doi:10.1038/s41598-018-24916-9. ISSN 2045-2322. PMC 5940850. PMID 29739959.
Zhang, Louis (5 November 2022). "Machine learning for enumeration of cell colony forming units". Visual Computing for Industry, Biomedicine, and Art. 5 (1): 26. doi:10.1186/s42492-022-00122-3. ISSN 2524-4442. PMC 9637067. PMID 36334176.
Geissmann, Quentin (2013). "OpenCFU, a new free and open-source software to count cell colonies and other circular objects". PLOS ONE. 8 (2): e54072. arXiv:1210.5502. Bibcode:2013PLoSO...854072G. doi:10.1371/journal.pone.0054072. PMC 3574151. PMID 23457446.
Clarke, Matthew L.; Burton, Robert L.; Hill, A. Nayo; Litorja, Maritoni; Nahm, Moon H.; Hwang, Jeeseong (August 2010). "Low-cost, high-throughput, automated counting of bacterial colonies". Cytometry Part A. 77 (8): 790–797. doi:10.1002/cyto.a.20864. PMC 2909336. PMID 20140968.
Cai, Zhongli; Chattopadhyay, Niladri; Liu, Wenchao Jessica; Chan, Conrad; Pignol, Jean-Philippe; Reilly, Raymond M. (November 2011). "Optimized digital counting colonies of clonogenic assays using ImageJ software and customized macros: Comparison with manual counting". International Journal of Radiation Biology. 87 (11): 1135–1146. doi:10.3109/09553002.2011.622033. PMID 21913819. S2CID 25417288.
Bray, Mark-Anthony; Vokes, Martha S.; Carpenter, Anne E. (January 2015). "Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images". Current Protocols in Molecular Biology. 109 (1): 14.17.1–14.17.13. doi:10.1002/0471142727.mb1417s109. PMC 4302752. PMID 25559103.
Moucka, Michael; Muigg, Veronika; Schlotterbeck, Ann-Kathrin; Stöger, Laurent; Gensch, Alexander; Heller, Stefanie; Egli, Adrian (August 2022). "Performance of four bacterial cell counting apps for smartphones". Journal of Microbiological Methods. 199: 106508. doi:10.1016/j.mimet.2022.106508. PMID 35691441.
Austerjost, Jonas; Marquard, Daniel; Raddatz, Lukas; Geier, Dominik; Becker, Thomas; Scheper, Thomas; Lindner, Patrick; Beutel, Sascha (August 2017). "A smart device application for the automated determination of E. coli colonies on agar plates". Engineering in Life Sciences. 17 (8): 959–966. doi:10.1002/elsc.201700056. ISSN 1618-0240. PMC 6999497. PMID 32624845.
Jarvis, Basil (2016). "Errors associated with colony count procedures". Statistical Aspects of the Microbiological Examination of Foods. Elsevier: 119–140. doi:10.1016/b978-0-12-803973-1.00007-3. ISBN 978-0-12-803973-1.
Heuser, Elisa; Becker, Karsten; Idelevich, Evgeny A. (17 August 2023). "Evaluation of an Automated System for the Counting of Microbial Colonies". Microbiology Spectrum. 11 (4): e00673-23. doi:10.1128/spectrum.00673-23. PMC 10433998. PMID 37395656.
Gilchrist, J. E.; Campbell, J. E.; Donnelly, C. B.; Peeler, J. T.; Delaney, J. M. (1973). "Spiral Plate Method for Bacterial Determination". Applied Microbiology. 25 (2): 244–252. doi:10.1128/am.25.2.244-252.1973. ISSN 0003-6919. PMC 380780. PMID 4632851.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (20 March 2012). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Dehority, B A; Tirabasso, P A; Grifo, A P (1989). "Most-probable-number procedures for enumerating ruminal bacteria, including the simultaneous estimation of total and cellulolytic numbers in one medium". Applied and Environmental Microbiology. 55 (11): 2789–2792. doi:10.1128/aem.55.11.2789-2792.1989. ISSN 0099-2240. PMC 203169. PMID 2624460.

elsevier.com

linkinghub.elsevier.com

Schug, Angela R.; Bartel, Alexander; Meurer, Marita; Scholtzek, Anissa D.; Brombach, Julian; Hensel, Vivian; Fanning, Séamus; Schwarz, Stefan; Feßler, Andrea T. (1 December 2020). "Comparison of two methods for cell count determination in the course of biocide susceptibility testing". Veterinary Microbiology. 251: 108831. doi:10.1016/j.vetmic.2020.108831. PMID 33202368. S2CID 225308316.
Foladori, Paola; Laura, Bruni; Gianni, Andreottola; Giuliano, Ziglio (2007). "Effects of sonication on bacteria viability in wastewater treatment plants evaluated by flow cytometry—Fecal indicators, wastewater and activated sludge". Water Research. 41 (1): 235–243. doi:10.1016/j.watres.2006.08.021. PMID 17052743.

fda.gov

Blodgett, Robert (October 2010). "Bacterial Analytical Manual: Most Probable Number from Serial Dilutions". United States Food and Drug Administration.

harvard.edu

ui.adsabs.harvard.edu

Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (2012-03-20). Bereswill, Stefan (ed.). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Geissmann, Quentin (2013). "OpenCFU, a new free and open-source software to count cell colonies and other circular objects". PLOS ONE. 8 (2): e54072. arXiv:1210.5502. Bibcode:2013PLoSO...854072G. doi:10.1371/journal.pone.0054072. PMC 3574151. PMID 23457446.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (20 March 2012). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.

icmsf.org

Cole, Martin (1 November 2005). "Principles of microbiological testing: Statistical basis of sampling" (PDF). International Commission on Microbiological Specifications for Foods (ICMSF). Archived from the original (PDF) on 31 October 2017. Retrieved 25 September 2016.

labtube.tv

"Fully Automatic Colony Counter by AAA Lab Equipment Video". LabTube. August 7, 2015. Retrieved 2018-09-28.

microbelibrary.org

Reynolds, Jackie. "Serial Dilution Protocols". www.microbelibrary.org. Archived from the original on 17 November 2015. Retrieved 15 November 2015.

nih.gov

pubmed.ncbi.nlm.nih.gov

Amann, R I; Ludwig, W; Schleifer, K H (1995). "Phylogenetic identification and in situ detection of individual microbial cells without cultivation". Microbiological Reviews. 59 (1): 143–169. doi:10.1128/mr.59.1.143-169.1995. ISSN 0146-0749. PMC 239358. PMID 7535888.
Staley, James T.; Konopka, Allan (1985). "Measurement of In Situ Activities of Nonphotosynthetic Microorganisms in Aquatic and Terrestrial Habitats". Annual Review of Microbiology. 39 (1): 321–346. doi:10.1146/annurev.mi.39.100185.001541. ISSN 0066-4227. PMID 3904603.
Breed, RS; Dotterrer, WD (May 1916). "The Number of Colonies Allowable on Satisfactory Agar Plates". Journal of Bacteriology. 1 (3): 321–31. doi:10.1128/JB.1.3.321-331.1916. PMC 378655. PMID 16558698.
Schug, Angela R.; Bartel, Alexander; Meurer, Marita; Scholtzek, Anissa D.; Brombach, Julian; Hensel, Vivian; Fanning, Séamus; Schwarz, Stefan; Feßler, Andrea T. (1 December 2020). "Comparison of two methods for cell count determination in the course of biocide susceptibility testing". Veterinary Microbiology. 251: 108831. doi:10.1016/j.vetmic.2020.108831. PMID 33202368. S2CID 225308316.
Badieyan, Saeedesadat; Dilmaghani-Marand, Arezou; Hajipour, Mohammad Javad; Ameri, Ali; Razzaghi, Mohammad Reza; Rafii-Tabar, Hashem; Mahmoudi, Morteza; Sasanpour, Pezhman (17 July 2018). "Detection and Discrimination of Bacterial Colonies with Mueller Matrix Imaging". Scientific Reports. 8 (1): 10815. doi:10.1038/s41598-018-29059-5. ISSN 2045-2322. PMC 6050273. PMID 30018335.
Foladori, Paola; Laura, Bruni; Gianni, Andreottola; Giuliano, Ziglio (2007). "Effects of sonication on bacteria viability in wastewater treatment plants evaluated by flow cytometry—Fecal indicators, wastewater and activated sludge". Water Research. 41 (1): 235–243. doi:10.1016/j.watres.2006.08.021. PMID 17052743.
Whitmire, Jeannette M.; Merrell, D. Scott (2012), Houghton, JeanMarie (ed.), "Successful Culture Techniques for Helicobacter Species: General Culture Techniques for Helicobacter pylori", Helicobacter Species, Methods in Molecular Biology, vol. 921, Totowa, NJ: Humana Press, pp. 17–27, doi:10.1007/978-1-62703-005-2_4, ISBN 978-1-62703-004-5, PMID 23015487, retrieved 1 December 2023
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (2012-03-20). Bereswill, Stefan (ed.). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Khan, Arif ul Maula; Torelli, Angelo; Wolf, Ivo; Gretz, Norbert (8 May 2018). "AutoCellSeg: robust automatic colony forming unit (CFU)/cell analysis using adaptive image segmentation and easy-to-use post-editing techniques". Scientific Reports. 8 (1): 7302. doi:10.1038/s41598-018-24916-9. ISSN 2045-2322. PMC 5940850. PMID 29739959.
Zhang, Louis (5 November 2022). "Machine learning for enumeration of cell colony forming units". Visual Computing for Industry, Biomedicine, and Art. 5 (1): 26. doi:10.1186/s42492-022-00122-3. ISSN 2524-4442. PMC 9637067. PMID 36334176.
Geissmann, Quentin (2013). "OpenCFU, a new free and open-source software to count cell colonies and other circular objects". PLOS ONE. 8 (2): e54072. arXiv:1210.5502. Bibcode:2013PLoSO...854072G. doi:10.1371/journal.pone.0054072. PMC 3574151. PMID 23457446.
Clarke, Matthew L.; Burton, Robert L.; Hill, A. Nayo; Litorja, Maritoni; Nahm, Moon H.; Hwang, Jeeseong (August 2010). "Low-cost, high-throughput, automated counting of bacterial colonies". Cytometry Part A. 77 (8): 790–797. doi:10.1002/cyto.a.20864. PMC 2909336. PMID 20140968.
Cai, Zhongli; Chattopadhyay, Niladri; Liu, Wenchao Jessica; Chan, Conrad; Pignol, Jean-Philippe; Reilly, Raymond M. (November 2011). "Optimized digital counting colonies of clonogenic assays using ImageJ software and customized macros: Comparison with manual counting". International Journal of Radiation Biology. 87 (11): 1135–1146. doi:10.3109/09553002.2011.622033. PMID 21913819. S2CID 25417288.
Bray, Mark-Anthony; Vokes, Martha S.; Carpenter, Anne E. (January 2015). "Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images". Current Protocols in Molecular Biology. 109 (1): 14.17.1–14.17.13. doi:10.1002/0471142727.mb1417s109. PMC 4302752. PMID 25559103.
Moucka, Michael; Muigg, Veronika; Schlotterbeck, Ann-Kathrin; Stöger, Laurent; Gensch, Alexander; Heller, Stefanie; Egli, Adrian (August 2022). "Performance of four bacterial cell counting apps for smartphones". Journal of Microbiological Methods. 199: 106508. doi:10.1016/j.mimet.2022.106508. PMID 35691441.
Austerjost, Jonas; Marquard, Daniel; Raddatz, Lukas; Geier, Dominik; Becker, Thomas; Scheper, Thomas; Lindner, Patrick; Beutel, Sascha (August 2017). "A smart device application for the automated determination of E. coli colonies on agar plates". Engineering in Life Sciences. 17 (8): 959–966. doi:10.1002/elsc.201700056. ISSN 1618-0240. PMC 6999497. PMID 32624845.
Heuser, Elisa; Becker, Karsten; Idelevich, Evgeny A. (17 August 2023). "Evaluation of an Automated System for the Counting of Microbial Colonies". Microbiology Spectrum. 11 (4): e00673-23. doi:10.1128/spectrum.00673-23. PMC 10433998. PMID 37395656.
Gilchrist, J. E.; Campbell, J. E.; Donnelly, C. B.; Peeler, J. T.; Delaney, J. M. (1973). "Spiral Plate Method for Bacterial Determination". Applied Microbiology. 25 (2): 244–252. doi:10.1128/am.25.2.244-252.1973. ISSN 0003-6919. PMC 380780. PMID 4632851.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (20 March 2012). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Dehority, B A; Tirabasso, P A; Grifo, A P (1989). "Most-probable-number procedures for enumerating ruminal bacteria, including the simultaneous estimation of total and cellulolytic numbers in one medium". Applied and Environmental Microbiology. 55 (11): 2789–2792. doi:10.1128/aem.55.11.2789-2792.1989. ISSN 0099-2240. PMC 203169. PMID 2624460.

ncbi.nlm.nih.gov

Amann, R I; Ludwig, W; Schleifer, K H (1995). "Phylogenetic identification and in situ detection of individual microbial cells without cultivation". Microbiological Reviews. 59 (1): 143–169. doi:10.1128/mr.59.1.143-169.1995. ISSN 0146-0749. PMC 239358. PMID 7535888.
Breed, RS; Dotterrer, WD (May 1916). "The Number of Colonies Allowable on Satisfactory Agar Plates". Journal of Bacteriology. 1 (3): 321–31. doi:10.1128/JB.1.3.321-331.1916. PMC 378655. PMID 16558698.
Badieyan, Saeedesadat; Dilmaghani-Marand, Arezou; Hajipour, Mohammad Javad; Ameri, Ali; Razzaghi, Mohammad Reza; Rafii-Tabar, Hashem; Mahmoudi, Morteza; Sasanpour, Pezhman (17 July 2018). "Detection and Discrimination of Bacterial Colonies with Mueller Matrix Imaging". Scientific Reports. 8 (1): 10815. doi:10.1038/s41598-018-29059-5. ISSN 2045-2322. PMC 6050273. PMID 30018335.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (2012-03-20). Bereswill, Stefan (ed.). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Khan, Arif ul Maula; Torelli, Angelo; Wolf, Ivo; Gretz, Norbert (8 May 2018). "AutoCellSeg: robust automatic colony forming unit (CFU)/cell analysis using adaptive image segmentation and easy-to-use post-editing techniques". Scientific Reports. 8 (1): 7302. doi:10.1038/s41598-018-24916-9. ISSN 2045-2322. PMC 5940850. PMID 29739959.
Zhang, Louis (5 November 2022). "Machine learning for enumeration of cell colony forming units". Visual Computing for Industry, Biomedicine, and Art. 5 (1): 26. doi:10.1186/s42492-022-00122-3. ISSN 2524-4442. PMC 9637067. PMID 36334176.
Geissmann, Quentin (2013). "OpenCFU, a new free and open-source software to count cell colonies and other circular objects". PLOS ONE. 8 (2): e54072. arXiv:1210.5502. Bibcode:2013PLoSO...854072G. doi:10.1371/journal.pone.0054072. PMC 3574151. PMID 23457446.
Clarke, Matthew L.; Burton, Robert L.; Hill, A. Nayo; Litorja, Maritoni; Nahm, Moon H.; Hwang, Jeeseong (August 2010). "Low-cost, high-throughput, automated counting of bacterial colonies". Cytometry Part A. 77 (8): 790–797. doi:10.1002/cyto.a.20864. PMC 2909336. PMID 20140968.
Bray, Mark-Anthony; Vokes, Martha S.; Carpenter, Anne E. (January 2015). "Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images". Current Protocols in Molecular Biology. 109 (1): 14.17.1–14.17.13. doi:10.1002/0471142727.mb1417s109. PMC 4302752. PMID 25559103.
Austerjost, Jonas; Marquard, Daniel; Raddatz, Lukas; Geier, Dominik; Becker, Thomas; Scheper, Thomas; Lindner, Patrick; Beutel, Sascha (August 2017). "A smart device application for the automated determination of E. coli colonies on agar plates". Engineering in Life Sciences. 17 (8): 959–966. doi:10.1002/elsc.201700056. ISSN 1618-0240. PMC 6999497. PMID 32624845.
Heuser, Elisa; Becker, Karsten; Idelevich, Evgeny A. (17 August 2023). "Evaluation of an Automated System for the Counting of Microbial Colonies". Microbiology Spectrum. 11 (4): e00673-23. doi:10.1128/spectrum.00673-23. PMC 10433998. PMID 37395656.
Gilchrist, J. E.; Campbell, J. E.; Donnelly, C. B.; Peeler, J. T.; Delaney, J. M. (1973). "Spiral Plate Method for Bacterial Determination". Applied Microbiology. 25 (2): 244–252. doi:10.1128/am.25.2.244-252.1973. ISSN 0003-6919. PMC 380780. PMID 4632851.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (20 March 2012). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Dehority, B A; Tirabasso, P A; Grifo, A P (1989). "Most-probable-number procedures for enumerating ruminal bacteria, including the simultaneous estimation of total and cellulolytic numbers in one medium". Applied and Environmental Microbiology. 55 (11): 2789–2792. doi:10.1128/aem.55.11.2789-2792.1989. ISSN 0099-2240. PMC 203169. PMID 2624460.

promegaconnections.com

Arduengo, Michele (29 March 2013). "Now Available for Purchase: Promega Colony Counter App". Promega Connections.

semanticscholar.org

api.semanticscholar.org

Schug, Angela R.; Bartel, Alexander; Meurer, Marita; Scholtzek, Anissa D.; Brombach, Julian; Hensel, Vivian; Fanning, Séamus; Schwarz, Stefan; Feßler, Andrea T. (1 December 2020). "Comparison of two methods for cell count determination in the course of biocide susceptibility testing". Veterinary Microbiology. 251: 108831. doi:10.1016/j.vetmic.2020.108831. PMID 33202368. S2CID 225308316.
Cai, Zhongli; Chattopadhyay, Niladri; Liu, Wenchao Jessica; Chan, Conrad; Pignol, Jean-Philippe; Reilly, Raymond M. (November 2011). "Optimized digital counting colonies of clonogenic assays using ImageJ software and customized macros: Comparison with manual counting". International Journal of Radiation Biology. 87 (11): 1135–1146. doi:10.3109/09553002.2011.622033. PMID 21913819. S2CID 25417288.

springer.com

link.springer.com

Whitmire, Jeannette M.; Merrell, D. Scott (2012), Houghton, JeanMarie (ed.), "Successful Culture Techniques for Helicobacter Species: General Culture Techniques for Helicobacter pylori", Helicobacter Species, Methods in Molecular Biology, vol. 921, Totowa, NJ: Humana Press, pp. 17–27, doi:10.1007/978-1-62703-005-2_4, ISBN 978-1-62703-004-5, PMID 23015487, retrieved 1 December 2023

tititudorancea.net

"Log10 Colony Forming Units per Gram". Titi Tudorancea Encyclopedia. Retrieved 25 September 2016.

usp.org

"USP 61: Microbial Enumeration Tests". United States Pharmacopeia. Retrieved 21 May 2024.

web.archive.org

Cole, Martin (1 November 2005). "Principles of microbiological testing: Statistical basis of sampling" (PDF). International Commission on Microbiological Specifications for Foods (ICMSF). Archived from the original (PDF) on 31 October 2017. Retrieved 25 September 2016.
Reynolds, Jackie. "Serial Dilution Protocols". www.microbelibrary.org. Archived from the original on 17 November 2015. Retrieved 15 November 2015.

worldcat.org

search.worldcat.org

Amann, R I; Ludwig, W; Schleifer, K H (1995). "Phylogenetic identification and in situ detection of individual microbial cells without cultivation". Microbiological Reviews. 59 (1): 143–169. doi:10.1128/mr.59.1.143-169.1995. ISSN 0146-0749. PMC 239358. PMID 7535888.
Staley, James T.; Konopka, Allan (1985). "Measurement of In Situ Activities of Nonphotosynthetic Microorganisms in Aquatic and Terrestrial Habitats". Annual Review of Microbiology. 39 (1): 321–346. doi:10.1146/annurev.mi.39.100185.001541. ISSN 0066-4227. PMID 3904603.
Badieyan, Saeedesadat; Dilmaghani-Marand, Arezou; Hajipour, Mohammad Javad; Ameri, Ali; Razzaghi, Mohammad Reza; Rafii-Tabar, Hashem; Mahmoudi, Morteza; Sasanpour, Pezhman (17 July 2018). "Detection and Discrimination of Bacterial Colonies with Mueller Matrix Imaging". Scientific Reports. 8 (1): 10815. doi:10.1038/s41598-018-29059-5. ISSN 2045-2322. PMC 6050273. PMID 30018335.
Brugger, Silvio D.; Baumberger, Christian; Jost, Marcel; Jenni, Werner; Brugger, Urs; Mühlemann, Kathrin (2012-03-20). Bereswill, Stefan (ed.). "Automated Counting of Bacterial Colony Forming Units on Agar Plates". PLOS ONE. 7 (3): e33695. Bibcode:2012PLoSO...733695B. doi:10.1371/journal.pone.0033695. ISSN 1932-6203. PMC 3308999. PMID 22448267.
Khan, Arif ul Maula; Torelli, Angelo; Wolf, Ivo; Gretz, Norbert (8 May 2018). "AutoCellSeg: robust automatic colony forming unit (CFU)/cell analysis using adaptive image segmentation and easy-to-use post-editing techniques". Scientific Reports. 8 (1): 7302. doi:10.1038/s41598-018-24916-9. ISSN 2045-2322. PMC 5940850. PMID 29739959.
Zhang, Louis (5 November 2022). "Machine learning for enumeration of cell colony forming units". Visual Computing for Industry, Biomedicine, and Art. 5 (1): 26. doi:10.1186/s42492-022-00122-3. ISSN 2524-4442. PMC 9637067. PMID 36334176.
Austerjost, Jonas; Marquard, Daniel; Raddatz, Lukas; Geier, Dominik; Becker, Thomas; Scheper, Thomas; Lindner, Patrick; Beutel, Sascha (August 2017). "A smart device application for the automated determination of E. coli colonies on agar plates". Engineering in Life Sciences. 17 (8): 959–966. doi:10.1002/elsc.201700056. ISSN 1618-0240. PMC 6999497. PMID 32624845.
Gilchrist, J. E.; Campbell, J. E.; Donnelly, C. B.; Peeler, J. T.; Delaney, J. M. (1973). "Spiral Plate Method for Bacterial Determination". Applied Microbiology. 25 (2): 244–252. doi:10.1128/am.25.2.244-252.1973. ISSN 0003-6919. PMC 380780. PMID 4632851.
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