Deoxyribose-phosphate aldolase (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Deoxyribose-phosphate aldolase" in English language version.

refsWebsite

Global rank English rank

17nih.gov

4^th place

14doi.org

2^nd place

2worldcat.org

5^th place

2harvard.edu

18^th place

17^th place

2semanticscholar.org

11^th place

8^th place

doi.org (Global: 2^nd place; English: 2^nd place)

Chambre, Domitille; Guérard-Hélaine, Christine; Darii, Ekaterina; Mariage, Aline; Petit, Jean-Louis; Salanoubat, Marcel; de Berardinis, Véronique; Lemaire, Marielle; Hélaine, Virgil (2019). "2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates". Chemical Communications. 55 (52): 7498–7501. doi:10.1039/c9cc03361k. PMID 31187106.
Heine, Andreas; Luz, John G.; Wong, Chi-Huey; Wilson, Ian A. (October 2004). "Analysis of the Class I Aldolase Binding Site Architecture Based on the Crystal Structure of 2-Deoxyribose-5-phosphate Aldolase at 0.99Å Resolution". Journal of Molecular Biology. 343 (4): 1019–1034. doi:10.1016/j.jmb.2004.08.066. PMID 15476818.
Liu, Junjie; Wong, Chi-Huey (15 April 2002). "Aldolase-Catalyzed Asymmetric Synthesis of Novel Pyranose Synthons as a New Entry to Heterocycles and Epothilones". Angewandte Chemie International Edition. 41 (8): 1404–1407. doi:10.1002/1521-3773(20020415)41:8<1404::AID-ANIE1404>3.0.CO;2-G. PMID 19750780.
Lokanath, N. K.; Shiromizu, I.; Ohshima, N.; Nodake, Y.; Sugahara, M.; Yokoyama, S.; Kuramitsu, S.; Miyano, M.; Kunishima, N. (1 October 2004). "Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability". Acta Crystallographica Section D. 60 (10): 1816–1823. doi:10.1107/S0907444904020190. ISSN 0907-4449. PMID 15388928.
Dick, Markus; Weiergräber, Oliver H.; Classen, Thomas; Bisterfeld, Carolin; Bramski, Julia; Gohlke, Holger; Pietruszka, Jörg (19 January 2016). "Trading off stability against activity in extremophilic aldolases". Scientific Reports. 6 (1) 17908. Bibcode:2016NatSR...617908D. doi:10.1038/srep17908. PMC 4725968. PMID 26783049.
Lomax, MS; Greenberg, GR (August 1968). "Characteristics of the deo operon: role in thymine utilization and sensitivity to deoxyribonucleosides". Journal of Bacteriology. 96 (2): 501–14. doi:10.1128/JB.96.2.501-514.1968. PMC 252324. PMID 4877128.
Salleron, Lisa; Magistrelli, Giovanni; Mary, Camille; Fischer, Nicolas; Bairoch, Amos; Lane, Lydie (December 2014). "DERA is the human deoxyribose phosphate aldolase and is involved in stress response". Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 1843 (12): 2913–2925. doi:10.1016/j.bbamcr.2014.09.007. PMID 25229427.
HORINOUCHI, Nobuyuki; OGAWA, Jun; KAWANO, Takako; SAKAI, Takafumi; SAITO, Kyota; MATSUMOTO, Seiichiro; SASAKI, Mie; MIKAMI, Yoichi; SHIMIZU, Sakayu (22 May 2014). "Efficient Production of 2-Deoxyribose 5-Phosphate from Glucose and Acetaldehyde by Coupling of the Alcoholic Fermentation System of Baker's Yeast and Deoxyriboaldolase-Expressing". Bioscience, Biotechnology, and Biochemistry. 70 (6): 1371–1378. doi:10.1271/bbb.50648. PMID 16794316. S2CID 22227871.
Huffman, Mark A.; Fryszkowska, Anna; Alvizo, Oscar; Borra-Garske, Margie; Campos, Kevin R.; Canada, Keith A.; Devine, Paul N.; Duan, Da; Forstater, Jacob H.; Grosser, Shane T.; Halsey, Holst M.; Hughes, Gregory J.; Jo, Junyong; Joyce, Leo A.; Kolev, Joshua N.; Liang, Jack; Maloney, Kevin M.; Mann, Benjamin F.; Marshall, Nicholas M.; McLaughlin, Mark; Moore, Jeffrey C.; Murphy, Grant S.; Nawrat, Christopher C.; Nazor, Jovana; Novick, Scott; Patel, Niki R.; Rodriguez-Granillo, Agustina; Robaire, Sandra A.; Sherer, Edward C.; Truppo, Matthew D.; Whittaker, Aaron M.; Verma, Deeptak; Xiao, Li; Xu, Yingju; Yang, Hao (5 December 2019). "Design of an in vitro biocatalytic cascade for the manufacture of islatravir". Science. 366 (6470): 1255–1259. Bibcode:2019Sci...366.1255H. doi:10.1126/science.aay8484. PMID 31806816. S2CID 208738388.
GIJSEN, H. J. M.; WONG, C.-H. (18 August 2010). "ChemInform Abstract: Unprecedented Asymmetric Aldol Reactions with Three Aldehyde Substrates Catalyzed by 2-Deoxyribose-5-phosphate Aldolase". ChemInform. 26 (15): no. doi:10.1002/chin.199515259. ISSN 0931-7597.
Jennewein, Stefan; Schürmann, Martin; Wolberg, Michael; Hilker, Iris; Luiten, Ruud; Wubbolts, Marcel; Mink, Daniel (May 2006). "Directed evolution of an industrial biocatalyst: 2-deoxy-D-ribose 5-phosphate aldolase". Biotechnology Journal. 1 (5): 537–548. doi:10.1002/biot.200600020. PMID 16892289.
Patel, Ramesh N. (April 2018). "Biocatalysis for synthesis of pharmaceuticals". Bioorganic & Medicinal Chemistry. 26 (7): 1252–1274. doi:10.1016/j.bmc.2017.05.023. PMID 28648492.
Haridas, Meera; Abdelraheem, Eman M. M.; Hanefeld, Ulf (3 October 2018). "2-Deoxy-d-ribose-5-phosphate aldolase (DERA): applications and modifications". Applied Microbiology and Biotechnology. 102 (23): 9959–9971. doi:10.1007/s00253-018-9392-8. PMC 6244999. PMID 30284013.
Dick, Markus; Hartmann, Rudolf; Weiergräber, Oliver H.; Bisterfeld, Carolin; Classen, Thomas; Schwarten, Melanie; Neudecker, Philipp; Willbold, Dieter; Pietruszka, Jörg (2016). "Mechanism-based inhibition of an aldolase at high concentrations of its natural substrate acetaldehyde: structural insights and protective strategies". Chemical Science. 7 (7): 4492–4502. doi:10.1039/c5sc04574f. PMC 6016325. PMID 30155096.

harvard.edu (Global: 18^th place; English: 17^th place)

ui.adsabs.harvard.edu

Dick, Markus; Weiergräber, Oliver H.; Classen, Thomas; Bisterfeld, Carolin; Bramski, Julia; Gohlke, Holger; Pietruszka, Jörg (19 January 2016). "Trading off stability against activity in extremophilic aldolases". Scientific Reports. 6 (1) 17908. Bibcode:2016NatSR...617908D. doi:10.1038/srep17908. PMC 4725968. PMID 26783049.
Huffman, Mark A.; Fryszkowska, Anna; Alvizo, Oscar; Borra-Garske, Margie; Campos, Kevin R.; Canada, Keith A.; Devine, Paul N.; Duan, Da; Forstater, Jacob H.; Grosser, Shane T.; Halsey, Holst M.; Hughes, Gregory J.; Jo, Junyong; Joyce, Leo A.; Kolev, Joshua N.; Liang, Jack; Maloney, Kevin M.; Mann, Benjamin F.; Marshall, Nicholas M.; McLaughlin, Mark; Moore, Jeffrey C.; Murphy, Grant S.; Nawrat, Christopher C.; Nazor, Jovana; Novick, Scott; Patel, Niki R.; Rodriguez-Granillo, Agustina; Robaire, Sandra A.; Sherer, Edward C.; Truppo, Matthew D.; Whittaker, Aaron M.; Verma, Deeptak; Xiao, Li; Xu, Yingju; Yang, Hao (5 December 2019). "Design of an in vitro biocatalytic cascade for the manufacture of islatravir". Science. 366 (6470): 1255–1259. Bibcode:2019Sci...366.1255H. doi:10.1126/science.aay8484. PMID 31806816. S2CID 208738388.

nih.gov (Global: 4^th place; English: 4^th place)

pubmed.ncbi.nlm.nih.gov

Chambre, Domitille; Guérard-Hélaine, Christine; Darii, Ekaterina; Mariage, Aline; Petit, Jean-Louis; Salanoubat, Marcel; de Berardinis, Véronique; Lemaire, Marielle; Hélaine, Virgil (2019). "2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates". Chemical Communications. 55 (52): 7498–7501. doi:10.1039/c9cc03361k. PMID 31187106.
Heine, Andreas; Luz, John G.; Wong, Chi-Huey; Wilson, Ian A. (October 2004). "Analysis of the Class I Aldolase Binding Site Architecture Based on the Crystal Structure of 2-Deoxyribose-5-phosphate Aldolase at 0.99Å Resolution". Journal of Molecular Biology. 343 (4): 1019–1034. doi:10.1016/j.jmb.2004.08.066. PMID 15476818.
Liu, Junjie; Wong, Chi-Huey (15 April 2002). "Aldolase-Catalyzed Asymmetric Synthesis of Novel Pyranose Synthons as a New Entry to Heterocycles and Epothilones". Angewandte Chemie International Edition. 41 (8): 1404–1407. doi:10.1002/1521-3773(20020415)41:8<1404::AID-ANIE1404>3.0.CO;2-G. PMID 19750780.
Lokanath, N. K.; Shiromizu, I.; Ohshima, N.; Nodake, Y.; Sugahara, M.; Yokoyama, S.; Kuramitsu, S.; Miyano, M.; Kunishima, N. (1 October 2004). "Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability". Acta Crystallographica Section D. 60 (10): 1816–1823. doi:10.1107/S0907444904020190. ISSN 0907-4449. PMID 15388928.
Dick, Markus; Weiergräber, Oliver H.; Classen, Thomas; Bisterfeld, Carolin; Bramski, Julia; Gohlke, Holger; Pietruszka, Jörg (19 January 2016). "Trading off stability against activity in extremophilic aldolases". Scientific Reports. 6 (1) 17908. Bibcode:2016NatSR...617908D. doi:10.1038/srep17908. PMC 4725968. PMID 26783049.
Lomax, MS; Greenberg, GR (August 1968). "Characteristics of the deo operon: role in thymine utilization and sensitivity to deoxyribonucleosides". Journal of Bacteriology. 96 (2): 501–14. doi:10.1128/JB.96.2.501-514.1968. PMC 252324. PMID 4877128.
Salleron, Lisa; Magistrelli, Giovanni; Mary, Camille; Fischer, Nicolas; Bairoch, Amos; Lane, Lydie (December 2014). "DERA is the human deoxyribose phosphate aldolase and is involved in stress response". Biochimica et Biophysica Acta (BBA) - Molecular Cell Research. 1843 (12): 2913–2925. doi:10.1016/j.bbamcr.2014.09.007. PMID 25229427.
HORINOUCHI, Nobuyuki; OGAWA, Jun; KAWANO, Takako; SAKAI, Takafumi; SAITO, Kyota; MATSUMOTO, Seiichiro; SASAKI, Mie; MIKAMI, Yoichi; SHIMIZU, Sakayu (22 May 2014). "Efficient Production of 2-Deoxyribose 5-Phosphate from Glucose and Acetaldehyde by Coupling of the Alcoholic Fermentation System of Baker's Yeast and Deoxyriboaldolase-Expressing". Bioscience, Biotechnology, and Biochemistry. 70 (6): 1371–1378. doi:10.1271/bbb.50648. PMID 16794316. S2CID 22227871.
Huffman, Mark A.; Fryszkowska, Anna; Alvizo, Oscar; Borra-Garske, Margie; Campos, Kevin R.; Canada, Keith A.; Devine, Paul N.; Duan, Da; Forstater, Jacob H.; Grosser, Shane T.; Halsey, Holst M.; Hughes, Gregory J.; Jo, Junyong; Joyce, Leo A.; Kolev, Joshua N.; Liang, Jack; Maloney, Kevin M.; Mann, Benjamin F.; Marshall, Nicholas M.; McLaughlin, Mark; Moore, Jeffrey C.; Murphy, Grant S.; Nawrat, Christopher C.; Nazor, Jovana; Novick, Scott; Patel, Niki R.; Rodriguez-Granillo, Agustina; Robaire, Sandra A.; Sherer, Edward C.; Truppo, Matthew D.; Whittaker, Aaron M.; Verma, Deeptak; Xiao, Li; Xu, Yingju; Yang, Hao (5 December 2019). "Design of an in vitro biocatalytic cascade for the manufacture of islatravir". Science. 366 (6470): 1255–1259. Bibcode:2019Sci...366.1255H. doi:10.1126/science.aay8484. PMID 31806816. S2CID 208738388.
Jennewein, Stefan; Schürmann, Martin; Wolberg, Michael; Hilker, Iris; Luiten, Ruud; Wubbolts, Marcel; Mink, Daniel (May 2006). "Directed evolution of an industrial biocatalyst: 2-deoxy-D-ribose 5-phosphate aldolase". Biotechnology Journal. 1 (5): 537–548. doi:10.1002/biot.200600020. PMID 16892289.
Patel, Ramesh N. (April 2018). "Biocatalysis for synthesis of pharmaceuticals". Bioorganic & Medicinal Chemistry. 26 (7): 1252–1274. doi:10.1016/j.bmc.2017.05.023. PMID 28648492.
Haridas, Meera; Abdelraheem, Eman M. M.; Hanefeld, Ulf (3 October 2018). "2-Deoxy-d-ribose-5-phosphate aldolase (DERA): applications and modifications". Applied Microbiology and Biotechnology. 102 (23): 9959–9971. doi:10.1007/s00253-018-9392-8. PMC 6244999. PMID 30284013.
Dick, Markus; Hartmann, Rudolf; Weiergräber, Oliver H.; Bisterfeld, Carolin; Classen, Thomas; Schwarten, Melanie; Neudecker, Philipp; Willbold, Dieter; Pietruszka, Jörg (2016). "Mechanism-based inhibition of an aldolase at high concentrations of its natural substrate acetaldehyde: structural insights and protective strategies". Chemical Science. 7 (7): 4492–4502. doi:10.1039/c5sc04574f. PMC 6016325. PMID 30155096.

ncbi.nlm.nih.gov

Dick, Markus; Weiergräber, Oliver H.; Classen, Thomas; Bisterfeld, Carolin; Bramski, Julia; Gohlke, Holger; Pietruszka, Jörg (19 January 2016). "Trading off stability against activity in extremophilic aldolases". Scientific Reports. 6 (1) 17908. Bibcode:2016NatSR...617908D. doi:10.1038/srep17908. PMC 4725968. PMID 26783049.
Lomax, MS; Greenberg, GR (August 1968). "Characteristics of the deo operon: role in thymine utilization and sensitivity to deoxyribonucleosides". Journal of Bacteriology. 96 (2): 501–14. doi:10.1128/JB.96.2.501-514.1968. PMC 252324. PMID 4877128.
Haridas, Meera; Abdelraheem, Eman M. M.; Hanefeld, Ulf (3 October 2018). "2-Deoxy-d-ribose-5-phosphate aldolase (DERA): applications and modifications". Applied Microbiology and Biotechnology. 102 (23): 9959–9971. doi:10.1007/s00253-018-9392-8. PMC 6244999. PMID 30284013.
Dick, Markus; Hartmann, Rudolf; Weiergräber, Oliver H.; Bisterfeld, Carolin; Classen, Thomas; Schwarten, Melanie; Neudecker, Philipp; Willbold, Dieter; Pietruszka, Jörg (2016). "Mechanism-based inhibition of an aldolase at high concentrations of its natural substrate acetaldehyde: structural insights and protective strategies". Chemical Science. 7 (7): 4492–4502. doi:10.1039/c5sc04574f. PMC 6016325. PMID 30155096.

semanticscholar.org (Global: 11^th place; English: 8^th place)

api.semanticscholar.org

HORINOUCHI, Nobuyuki; OGAWA, Jun; KAWANO, Takako; SAKAI, Takafumi; SAITO, Kyota; MATSUMOTO, Seiichiro; SASAKI, Mie; MIKAMI, Yoichi; SHIMIZU, Sakayu (22 May 2014). "Efficient Production of 2-Deoxyribose 5-Phosphate from Glucose and Acetaldehyde by Coupling of the Alcoholic Fermentation System of Baker's Yeast and Deoxyriboaldolase-Expressing". Bioscience, Biotechnology, and Biochemistry. 70 (6): 1371–1378. doi:10.1271/bbb.50648. PMID 16794316. S2CID 22227871.
Huffman, Mark A.; Fryszkowska, Anna; Alvizo, Oscar; Borra-Garske, Margie; Campos, Kevin R.; Canada, Keith A.; Devine, Paul N.; Duan, Da; Forstater, Jacob H.; Grosser, Shane T.; Halsey, Holst M.; Hughes, Gregory J.; Jo, Junyong; Joyce, Leo A.; Kolev, Joshua N.; Liang, Jack; Maloney, Kevin M.; Mann, Benjamin F.; Marshall, Nicholas M.; McLaughlin, Mark; Moore, Jeffrey C.; Murphy, Grant S.; Nawrat, Christopher C.; Nazor, Jovana; Novick, Scott; Patel, Niki R.; Rodriguez-Granillo, Agustina; Robaire, Sandra A.; Sherer, Edward C.; Truppo, Matthew D.; Whittaker, Aaron M.; Verma, Deeptak; Xiao, Li; Xu, Yingju; Yang, Hao (5 December 2019). "Design of an in vitro biocatalytic cascade for the manufacture of islatravir". Science. 366 (6470): 1255–1259. Bibcode:2019Sci...366.1255H. doi:10.1126/science.aay8484. PMID 31806816. S2CID 208738388.

worldcat.org (Global: 5^th place; English: 5^th place)

search.worldcat.org

Lokanath, N. K.; Shiromizu, I.; Ohshima, N.; Nodake, Y.; Sugahara, M.; Yokoyama, S.; Kuramitsu, S.; Miyano, M.; Kunishima, N. (1 October 2004). "Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability". Acta Crystallographica Section D. 60 (10): 1816–1823. doi:10.1107/S0907444904020190. ISSN 0907-4449. PMID 15388928.
GIJSEN, H. J. M.; WONG, C.-H. (18 August 2010). "ChemInform Abstract: Unprecedented Asymmetric Aldol Reactions with Three Aldehyde Substrates Catalyzed by 2-Deoxyribose-5-phosphate Aldolase". ChemInform. 26 (15): no. doi:10.1002/chin.199515259. ISSN 0931-7597.

Deoxyribose-phosphate aldolase (English Wikipedia)

doi.org (Global: 2nd place; English: 2nd place)

harvard.edu (Global: 18th place; English: 17th place)