Dokdonia (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Dokdonia" in English language version.

refsWebsite

Global rank English rank

40nih.gov

4^th place

35doi.org

2^nd place

14worldcat.org

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10harvard.edu

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3semanticscholar.org

11^th place

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2dsmz.de

4,644^th place

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2handle.net

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1uniprot.org

5,673^rd place

6,418^th place

1diva-portal.org

3,588^th place

3,072^nd place

diva-portal.org

Israelsson, Stina (2020-06-05). "Seasonal dynamics of Baltic Sea plankton activities: heterotrophic bacterial function under different biological and environmental conditions".

doi.org

Parker CT, Garrity GM (2012). Parker CT, Garrity GM (eds.). "Nomenclature Abstract for Dokdonia Yoon et al. 2005 emend. Yoon et al. 2012". The NamesforLife Abstracts. doi:10.1601/nm.9754 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
Yoon JH, Kang SJ, Lee CH, Oh TK (November 2005). "Dokdonia donghaensis gen. nov., sp. nov., isolated from sea water". International Journal of Systematic and Evolutionary Microbiology. 55 (Pt 6): 2323–2328. doi:10.1099/ijs.0.63817-0. PMID 16280490.
Kim K, Kwon SK, Yoon JH, Kim JF (August 2016). "Complete Genome Sequence of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia donghaensis DSW-1T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea)". Genome Announcements. 4 (4): e00804–16. doi:10.1128/genomeA.00804-16. PMC 4974333. PMID 27491981.
Yoon JH, Kang SJ, Park S, Oh TK (August 2012). "Reclassification of the three species of the genus Krokinobacter into the genus Dokdonia as Dokdonia genika comb. nov., Dokdonia diaphoros comb. nov. and Dokdonia eikasta comb. nov., and emended description of the genus Dokdonia Yoon et al. 2005". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 8): 1896–1901. doi:10.1099/ijs.0.035253-0. PMID 21984677.
Khan ST, Nakagawa Y, Harayama S (February 2006). "Krokinobacter gen. nov., with three novel species, in the family Flavobacteriaceae". International Journal of Systematic and Evolutionary Microbiology. 56 (Pt 2): 323–328. doi:10.1099/ijs.0.63841-0. PMID 16449433.
Choi S, Kang JW, Yoon JH, Seong CN (March 2018). "Dokdonia flava sp. nov., isolated from the seaweed Zostera marina". International Journal of Systematic and Evolutionary Microbiology. 68 (3): 899–904. doi:10.1099/ijsem.0.002607. PMID 29458481.
Choi S, Kang JW, Lee JH, Seong CN (November 2017). "Dokdonia lutea sp. nov., isolated from Sargassum fulvellum seaweed". International Journal of Systematic and Evolutionary Microbiology. 67 (11): 4482–4486. doi:10.1099/ijsem.0.002317. PMID 28933321.
Zhang Z, Gao X, Wang L, Zhang XH (July 2015). "Dokdonia pacifica sp. nov., isolated from seawater". International Journal of Systematic and Evolutionary Microbiology. 65 (7): 2222–2226. doi:10.1099/ijs.0.000252. PMID 25862384.
Zhou LY, Meng X, Zhong YL, Li GY, Du ZJ, Mu DS (March 2020). "Dokdonia sinensis sp. nov., a flavobacterium isolated from surface seawater". International Journal of Systematic and Evolutionary Microbiology. 70 (3): 1617–1622. doi:10.1099/ijsem.0.003949. PMID 32228747. S2CID 213159033.
Burmølle, Mette; Webb, Jeremy S.; Rao, Dhana; Hansen, Lars H.; Sørensen, Søren J.; Kjelleberg, Staffan (June 2006). "Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/aem.03022-05. ISSN 0099-2240. PMC 1489630. PMID 16751497.
Gómez-Consarnau L, González JM, Coll-Lladó M, Gourdon P, Pascher T, Neutze R, et al. (January 2007). "Light stimulates growth of proteorhodopsin-containing marine Flavobacteria". Nature. 445 (7124): 210–213. Bibcode:2007Natur.445..210G. doi:10.1038/nature05381. PMID 17215843. S2CID 2338098.
Palovaara J, Akram N, Baltar F, Bunse C, Forsberg J, Pedrós-Alió C, et al. (September 2014). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences of the United States of America. 111 (35): E3650–E3658. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. PMC 4156726. PMID 25136122.
Lombard, Fabien; Boss, Emmanuel; Waite, Anya M.; Vogt, Meike; Uitz, Julia; Stemmann, Lars; Sosik, Heidi M.; Schulz, Jan; Romagnan, Jean-Baptiste; Picheral, Marc; Pearlman, Jay (2019). "Globally Consistent Quantitative Observations of Planktonic Ecosystems". Frontiers in Marine Science. 6. doi:10.3389/fmars.2019.00196. hdl:20.500.11850/343600. ISSN 2296-7745.
Parker, Charles Thomas; Wigley, Sarah; Garrity, George M.; Taylor, Dorothea (2008). Parker, Charles Thomas; Garrity, George M (eds.). "Strain DSM 17200 (=KCTC 12391 =DSW-1) : Microbial Characteristics and Genomic Information". doi:10.1601/ex.9753 (inactive 2024-04-17). {{cite journal}}: Cite journal requires |journal= (help)CS1 maint: DOI inactive as of April 2024 (link)
Parker, Charles Thomas; Wigley, Sarah; Garrity, George M. (2009). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomy of the genus Dokdonia Yoon et al. 2005 emend. Yoon et al. 2012". NamesforLife. doi:10.1601/tx.9754 (inactive 2024-04-17).{{cite journal}}: CS1 maint: DOI inactive as of April 2024 (link)
Choi S, Kang JW, Kim MS, Yoon JH, Seong CN (May 2018). "Dokdonia aurantiaca sp. nov., isolated from seaweed Zostera marina". International Journal of Systematic and Evolutionary Microbiology. 68 (5): 1697–1701. doi:10.1099/ijsem.0.002730. PMID 29570445.
Yoon JH, Kang SJ, Park S, Oh TK (August 2012). "Reclassification of the three species of the genus Krokinobacter into the genus Dokdonia as Dokdonia genika comb. nov., Dokdonia diaphoros comb. nov. and Dokdonia eikasta comb. nov., and emended description of the genus Dokdonia Yoon et al. 2005". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 8): 1896–1901. doi:10.1099/ijs.0.035253-0. PMID 21984677.
Park, Sooyeon; Won, Sung-Min; Yoon, Jung-Hoon (2018-09-01). "Dokdonia ponticola sp. nov., A Carrageenan-Degrading Bacterium of the Family Flavobacteriaceae Isolated from Seawater". Current Microbiology. 75 (9): 1126–1132. doi:10.1007/s00284-018-1496-y. ISSN 1432-0991. PMID 29761217. S2CID 46886165.
Schoch CL, Ciufo S, Domrachev M, Hotton CL, Kannan S, Khovanskaya R, et al. (January 2020). "NCBI Taxonomy: a comprehensive update on curation, resources and tools". Database. 2020: baaa062. doi:10.1093/database/baaa062. PMC 7408187. PMID 32761142.
González JM, Pinhassi J, Fernández-Gómez B, Coll-Lladó M, González-Velázquez M, Puigbò P, et al. (December 2011). "Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134". Applied and Environmental Microbiology. 77 (24): 8676–8686. Bibcode:2011ApEnM..77.8676G. doi:10.1128/AEM.06152-11. PMC 3233072. PMID 22003006.
Bratlie, Marit S; Johansen, Jostein; Drabløs, Finn (2010-01-28). "Relationship between operon preference and functional properties of persistent genes in bacterial genomes". BMC Genomics. 11 (1): 71. doi:10.1186/1471-2164-11-71. ISSN 1471-2164. PMC 2837039. PMID 20109203.
Dufayard, J.-F.; Duret, L.; Penel, S.; Gouy, M.; Rechenmann, F.; Perriere, G. (2005-02-15). "Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases". Bioinformatics. 21 (11): 2596–2603. doi:10.1093/bioinformatics/bti325. ISSN 1367-4803. PMID 15713731.
Posacka AM, Semeniuk DM, Maldonado MT (2019-02-05). "Effects of Copper Availability on the Physiology of Marine Heterotrophic Bacteria". Frontiers in Marine Science. 5: 523. doi:10.3389/fmars.2018.00523. ISSN 2296-7745.
Bogachev AV, Bertsova YV, Verkhovskaya ML, Mamedov MD, Skulachev VP (February 2016). "Real-time kinetics of electrogenic Na(+) transport by rhodopsin from the marine flavobacterium Dokdonia sp. PRO95". Scientific Reports. 6 (1): 21397. Bibcode:2016NatSR...621397B. doi:10.1038/srep21397. PMC 4749991. PMID 26864904.
Spudich, John L.; Jung, Kwang-Hwan (2005-09-26), "Microbial Rhodopsins: Phylogenetic and Functional Diversity", Handbook of Photosensory Receptors, Weinheim, FRG: Wiley-VCH Verlag GmbH & Co. KGaA, pp. 1–23, doi:10.1002/352760510x.ch1, ISBN 9783527605101, retrieved 2022-04-03
DeLong, Edward F.; Béjà, Oded (2010-04-27). "The Light-Driven Proton Pump Proteorhodopsin Enhances Bacterial Survival during Tough Times". PLOS Biology. 8 (4): e1000359. doi:10.1371/journal.pbio.1000359. ISSN 1545-7885. PMC 2860490. PMID 20436957.
Riedel, Thomas; Gómez-Consarnau, Laura; Tomasch, Jürgen; Martin, Madeleine; Jarek, Michael; González, José M.; Spring, Stefan; Rohlfs, Meike; Brinkhoff, Thorsten; Cypionka, Heribert; Göker, Markus (2013-03-04). "Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein". PLOS ONE. 8 (3): e57487. Bibcode:2013PLoSO...857487R. doi:10.1371/journal.pone.0057487. ISSN 1932-6203. PMC 3587595. PMID 23526944.
Gómez-Consarnau, Laura; Akram, Neelam; Lindell, Kristoffer; Pedersen, Anders; Neutze, Richard; Milton, Debra L.; González, José M.; Pinhassi, Jarone (2010-04-27). "Proteorhodopsin Phototrophy Promotes Survival of Marine Bacteria during Starvation". PLOS Biology. 8 (4): e1000358. doi:10.1371/journal.pbio.1000358. ISSN 1545-7885. PMC 2860489. PMID 20436956.
Steindler, Laura; Schwalbach, Michael S.; Smith, Daniel P.; Chan, Francis; Giovannoni, Stephen J. (2011-05-09). "Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): e19725. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. ISSN 1932-6203. PMC 3090418. PMID 21573025.
Basili M, Quero GM, Giovannelli D, Manini E, Vignaroli C, Avio CG, et al. (2020-05-07). "Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris". Frontiers in Marine Science. 7: 262. doi:10.3389/fmars.2020.00262. hdl:11566/277940. ISSN 2296-7745.
Burmølle M, Webb JS, Rao D, Hansen LH, Sørensen SJ, Kjelleberg S (June 2006). "Enhanced biofilm formation and increased resistance to antimicrobial agents and bacterial invasion are caused by synergistic interactions in multispecies biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/AEM.03022-05. PMC 1489630. PMID 16751497.
Koedooder, Coco; VanGeersdaële, Rémy; Guéneuguès, Audrey; Bouget, François-Yves; Obernosterer, Ingrid; Blain, Stéphane (2020-07-01). "The interplay between iron limitation, light and carbon in the proteorhodopsin-containing Photobacterium angustum S14". FEMS Microbiology Ecology. 96 (7): fiaa103. doi:10.1093/femsec/fiaa103. ISSN 0168-6496. PMID 32459302.
Palovaara, Joakim; Akram, Neelam; Baltar, Federico; Bunse, Carina; Forsberg, Jeremy; Pedrós-Alió, Carlos; González, José M.; Pinhassi, Jarone (2014-08-18). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences. 111 (35): E3650-8. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. ISSN 0027-8424. PMC 4156726. PMID 25136122.
Posacka, Anna M.; Semeniuk, David M.; Maldonado, Maria T. (2019). "Effects of Copper Availability on the Physiology of Marine Heterotrophic Bacteria". Frontiers in Marine Science. 5. doi:10.3389/fmars.2018.00523. ISSN 2296-7745.

dx.doi.org

Spudich, John L.; Jung, Kwang-Hwan (2005-09-26), "Microbial Rhodopsins: Phylogenetic and Functional Diversity", Handbook of Photosensory Receptors, Weinheim, FRG: Wiley-VCH Verlag GmbH & Co. KGaA, pp. 1–23, doi:10.1002/352760510x.ch1, ISBN 9783527605101, retrieved 2022-04-03

dsmz.de

lpsn.dsmz.de

Parte AC. "Dokdonia". LPSN.
"Genus: Dokdonia". lpsn.dsmz.de. Retrieved 2022-02-20.

handle.net

hdl.handle.net

Lombard, Fabien; Boss, Emmanuel; Waite, Anya M.; Vogt, Meike; Uitz, Julia; Stemmann, Lars; Sosik, Heidi M.; Schulz, Jan; Romagnan, Jean-Baptiste; Picheral, Marc; Pearlman, Jay (2019). "Globally Consistent Quantitative Observations of Planktonic Ecosystems". Frontiers in Marine Science. 6. doi:10.3389/fmars.2019.00196. hdl:20.500.11850/343600. ISSN 2296-7745.
Basili M, Quero GM, Giovannelli D, Manini E, Vignaroli C, Avio CG, et al. (2020-05-07). "Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris". Frontiers in Marine Science. 7: 262. doi:10.3389/fmars.2020.00262. hdl:11566/277940. ISSN 2296-7745.

harvard.edu

ui.adsabs.harvard.edu

Burmølle, Mette; Webb, Jeremy S.; Rao, Dhana; Hansen, Lars H.; Sørensen, Søren J.; Kjelleberg, Staffan (June 2006). "Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/aem.03022-05. ISSN 0099-2240. PMC 1489630. PMID 16751497.
Gómez-Consarnau L, González JM, Coll-Lladó M, Gourdon P, Pascher T, Neutze R, et al. (January 2007). "Light stimulates growth of proteorhodopsin-containing marine Flavobacteria". Nature. 445 (7124): 210–213. Bibcode:2007Natur.445..210G. doi:10.1038/nature05381. PMID 17215843. S2CID 2338098.
Palovaara J, Akram N, Baltar F, Bunse C, Forsberg J, Pedrós-Alió C, et al. (September 2014). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences of the United States of America. 111 (35): E3650–E3658. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. PMC 4156726. PMID 25136122.
Posacka, A. M.; Maldonado, M. T. (2016-02-01). "Responses of Diverse Marine Heterotrophic Bacteria to Changing Copper Availability". American Geophysical Union. 2016: CT44B–0243. Bibcode:2016AGUOSCT44B0243P.
González JM, Pinhassi J, Fernández-Gómez B, Coll-Lladó M, González-Velázquez M, Puigbò P, et al. (December 2011). "Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134". Applied and Environmental Microbiology. 77 (24): 8676–8686. Bibcode:2011ApEnM..77.8676G. doi:10.1128/AEM.06152-11. PMC 3233072. PMID 22003006.
Bogachev AV, Bertsova YV, Verkhovskaya ML, Mamedov MD, Skulachev VP (February 2016). "Real-time kinetics of electrogenic Na(+) transport by rhodopsin from the marine flavobacterium Dokdonia sp. PRO95". Scientific Reports. 6 (1): 21397. Bibcode:2016NatSR...621397B. doi:10.1038/srep21397. PMC 4749991. PMID 26864904.
Riedel, Thomas; Gómez-Consarnau, Laura; Tomasch, Jürgen; Martin, Madeleine; Jarek, Michael; González, José M.; Spring, Stefan; Rohlfs, Meike; Brinkhoff, Thorsten; Cypionka, Heribert; Göker, Markus (2013-03-04). "Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein". PLOS ONE. 8 (3): e57487. Bibcode:2013PLoSO...857487R. doi:10.1371/journal.pone.0057487. ISSN 1932-6203. PMC 3587595. PMID 23526944.
Steindler, Laura; Schwalbach, Michael S.; Smith, Daniel P.; Chan, Francis; Giovannoni, Stephen J. (2011-05-09). "Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): e19725. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. ISSN 1932-6203. PMC 3090418. PMID 21573025.
Burmølle M, Webb JS, Rao D, Hansen LH, Sørensen SJ, Kjelleberg S (June 2006). "Enhanced biofilm formation and increased resistance to antimicrobial agents and bacterial invasion are caused by synergistic interactions in multispecies biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/AEM.03022-05. PMC 1489630. PMID 16751497.
Palovaara, Joakim; Akram, Neelam; Baltar, Federico; Bunse, Carina; Forsberg, Jeremy; Pedrós-Alió, Carlos; González, José M.; Pinhassi, Jarone (2014-08-18). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences. 111 (35): E3650-8. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. ISSN 0027-8424. PMC 4156726. PMID 25136122.

nih.gov

pubmed.ncbi.nlm.nih.gov

Yoon JH, Kang SJ, Lee CH, Oh TK (November 2005). "Dokdonia donghaensis gen. nov., sp. nov., isolated from sea water". International Journal of Systematic and Evolutionary Microbiology. 55 (Pt 6): 2323–2328. doi:10.1099/ijs.0.63817-0. PMID 16280490.
Kim K, Kwon SK, Yoon JH, Kim JF (August 2016). "Complete Genome Sequence of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia donghaensis DSW-1T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea)". Genome Announcements. 4 (4): e00804–16. doi:10.1128/genomeA.00804-16. PMC 4974333. PMID 27491981.
Yoon JH, Kang SJ, Park S, Oh TK (August 2012). "Reclassification of the three species of the genus Krokinobacter into the genus Dokdonia as Dokdonia genika comb. nov., Dokdonia diaphoros comb. nov. and Dokdonia eikasta comb. nov., and emended description of the genus Dokdonia Yoon et al. 2005". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 8): 1896–1901. doi:10.1099/ijs.0.035253-0. PMID 21984677.
Khan ST, Nakagawa Y, Harayama S (February 2006). "Krokinobacter gen. nov., with three novel species, in the family Flavobacteriaceae". International Journal of Systematic and Evolutionary Microbiology. 56 (Pt 2): 323–328. doi:10.1099/ijs.0.63841-0. PMID 16449433.
Choi S, Kang JW, Yoon JH, Seong CN (March 2018). "Dokdonia flava sp. nov., isolated from the seaweed Zostera marina". International Journal of Systematic and Evolutionary Microbiology. 68 (3): 899–904. doi:10.1099/ijsem.0.002607. PMID 29458481.
Choi S, Kang JW, Lee JH, Seong CN (November 2017). "Dokdonia lutea sp. nov., isolated from Sargassum fulvellum seaweed". International Journal of Systematic and Evolutionary Microbiology. 67 (11): 4482–4486. doi:10.1099/ijsem.0.002317. PMID 28933321.
Zhang Z, Gao X, Wang L, Zhang XH (July 2015). "Dokdonia pacifica sp. nov., isolated from seawater". International Journal of Systematic and Evolutionary Microbiology. 65 (7): 2222–2226. doi:10.1099/ijs.0.000252. PMID 25862384.
Zhou LY, Meng X, Zhong YL, Li GY, Du ZJ, Mu DS (March 2020). "Dokdonia sinensis sp. nov., a flavobacterium isolated from surface seawater". International Journal of Systematic and Evolutionary Microbiology. 70 (3): 1617–1622. doi:10.1099/ijsem.0.003949. PMID 32228747. S2CID 213159033.
Burmølle, Mette; Webb, Jeremy S.; Rao, Dhana; Hansen, Lars H.; Sørensen, Søren J.; Kjelleberg, Staffan (June 2006). "Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/aem.03022-05. ISSN 0099-2240. PMC 1489630. PMID 16751497.
Gómez-Consarnau L, González JM, Coll-Lladó M, Gourdon P, Pascher T, Neutze R, et al. (January 2007). "Light stimulates growth of proteorhodopsin-containing marine Flavobacteria". Nature. 445 (7124): 210–213. Bibcode:2007Natur.445..210G. doi:10.1038/nature05381. PMID 17215843. S2CID 2338098.
Palovaara J, Akram N, Baltar F, Bunse C, Forsberg J, Pedrós-Alió C, et al. (September 2014). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences of the United States of America. 111 (35): E3650–E3658. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. PMC 4156726. PMID 25136122.
Choi S, Kang JW, Kim MS, Yoon JH, Seong CN (May 2018). "Dokdonia aurantiaca sp. nov., isolated from seaweed Zostera marina". International Journal of Systematic and Evolutionary Microbiology. 68 (5): 1697–1701. doi:10.1099/ijsem.0.002730. PMID 29570445.
Yoon JH, Kang SJ, Park S, Oh TK (August 2012). "Reclassification of the three species of the genus Krokinobacter into the genus Dokdonia as Dokdonia genika comb. nov., Dokdonia diaphoros comb. nov. and Dokdonia eikasta comb. nov., and emended description of the genus Dokdonia Yoon et al. 2005". International Journal of Systematic and Evolutionary Microbiology. 62 (Pt 8): 1896–1901. doi:10.1099/ijs.0.035253-0. PMID 21984677.
Park, Sooyeon; Won, Sung-Min; Yoon, Jung-Hoon (2018-09-01). "Dokdonia ponticola sp. nov., A Carrageenan-Degrading Bacterium of the Family Flavobacteriaceae Isolated from Seawater". Current Microbiology. 75 (9): 1126–1132. doi:10.1007/s00284-018-1496-y. ISSN 1432-0991. PMID 29761217. S2CID 46886165.
Schoch CL, Ciufo S, Domrachev M, Hotton CL, Kannan S, Khovanskaya R, et al. (January 2020). "NCBI Taxonomy: a comprehensive update on curation, resources and tools". Database. 2020: baaa062. doi:10.1093/database/baaa062. PMC 7408187. PMID 32761142.
González JM, Pinhassi J, Fernández-Gómez B, Coll-Lladó M, González-Velázquez M, Puigbò P, et al. (December 2011). "Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134". Applied and Environmental Microbiology. 77 (24): 8676–8686. Bibcode:2011ApEnM..77.8676G. doi:10.1128/AEM.06152-11. PMC 3233072. PMID 22003006.
Bratlie, Marit S; Johansen, Jostein; Drabløs, Finn (2010-01-28). "Relationship between operon preference and functional properties of persistent genes in bacterial genomes". BMC Genomics. 11 (1): 71. doi:10.1186/1471-2164-11-71. ISSN 1471-2164. PMC 2837039. PMID 20109203.
Dufayard, J.-F.; Duret, L.; Penel, S.; Gouy, M.; Rechenmann, F.; Perriere, G. (2005-02-15). "Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases". Bioinformatics. 21 (11): 2596–2603. doi:10.1093/bioinformatics/bti325. ISSN 1367-4803. PMID 15713731.
Bogachev AV, Bertsova YV, Verkhovskaya ML, Mamedov MD, Skulachev VP (February 2016). "Real-time kinetics of electrogenic Na(+) transport by rhodopsin from the marine flavobacterium Dokdonia sp. PRO95". Scientific Reports. 6 (1): 21397. Bibcode:2016NatSR...621397B. doi:10.1038/srep21397. PMC 4749991. PMID 26864904.
DeLong, Edward F.; Béjà, Oded (2010-04-27). "The Light-Driven Proton Pump Proteorhodopsin Enhances Bacterial Survival during Tough Times". PLOS Biology. 8 (4): e1000359. doi:10.1371/journal.pbio.1000359. ISSN 1545-7885. PMC 2860490. PMID 20436957.
Riedel, Thomas; Gómez-Consarnau, Laura; Tomasch, Jürgen; Martin, Madeleine; Jarek, Michael; González, José M.; Spring, Stefan; Rohlfs, Meike; Brinkhoff, Thorsten; Cypionka, Heribert; Göker, Markus (2013-03-04). "Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein". PLOS ONE. 8 (3): e57487. Bibcode:2013PLoSO...857487R. doi:10.1371/journal.pone.0057487. ISSN 1932-6203. PMC 3587595. PMID 23526944.
Gómez-Consarnau, Laura; Akram, Neelam; Lindell, Kristoffer; Pedersen, Anders; Neutze, Richard; Milton, Debra L.; González, José M.; Pinhassi, Jarone (2010-04-27). "Proteorhodopsin Phototrophy Promotes Survival of Marine Bacteria during Starvation". PLOS Biology. 8 (4): e1000358. doi:10.1371/journal.pbio.1000358. ISSN 1545-7885. PMC 2860489. PMID 20436956.
Steindler, Laura; Schwalbach, Michael S.; Smith, Daniel P.; Chan, Francis; Giovannoni, Stephen J. (2011-05-09). "Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): e19725. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. ISSN 1932-6203. PMC 3090418. PMID 21573025.
Burmølle M, Webb JS, Rao D, Hansen LH, Sørensen SJ, Kjelleberg S (June 2006). "Enhanced biofilm formation and increased resistance to antimicrobial agents and bacterial invasion are caused by synergistic interactions in multispecies biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/AEM.03022-05. PMC 1489630. PMID 16751497.
Koedooder, Coco; VanGeersdaële, Rémy; Guéneuguès, Audrey; Bouget, François-Yves; Obernosterer, Ingrid; Blain, Stéphane (2020-07-01). "The interplay between iron limitation, light and carbon in the proteorhodopsin-containing Photobacterium angustum S14". FEMS Microbiology Ecology. 96 (7): fiaa103. doi:10.1093/femsec/fiaa103. ISSN 0168-6496. PMID 32459302.
Palovaara, Joakim; Akram, Neelam; Baltar, Federico; Bunse, Carina; Forsberg, Jeremy; Pedrós-Alió, Carlos; González, José M.; Pinhassi, Jarone (2014-08-18). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences. 111 (35): E3650-8. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. ISSN 0027-8424. PMC 4156726. PMID 25136122.

ncbi.nlm.nih.gov

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Riedel, Thomas; Gómez-Consarnau, Laura; Tomasch, Jürgen; Martin, Madeleine; Jarek, Michael; González, José M.; Spring, Stefan; Rohlfs, Meike; Brinkhoff, Thorsten; Cypionka, Heribert; Göker, Markus (2013-03-04). "Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein". PLOS ONE. 8 (3): e57487. Bibcode:2013PLoSO...857487R. doi:10.1371/journal.pone.0057487. ISSN 1932-6203. PMC 3587595. PMID 23526944.
Gómez-Consarnau, Laura; Akram, Neelam; Lindell, Kristoffer; Pedersen, Anders; Neutze, Richard; Milton, Debra L.; González, José M.; Pinhassi, Jarone (2010-04-27). "Proteorhodopsin Phototrophy Promotes Survival of Marine Bacteria during Starvation". PLOS Biology. 8 (4): e1000358. doi:10.1371/journal.pbio.1000358. ISSN 1545-7885. PMC 2860489. PMID 20436956.
Steindler, Laura; Schwalbach, Michael S.; Smith, Daniel P.; Chan, Francis; Giovannoni, Stephen J. (2011-05-09). "Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): e19725. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. ISSN 1932-6203. PMC 3090418. PMID 21573025.
Burmølle M, Webb JS, Rao D, Hansen LH, Sørensen SJ, Kjelleberg S (June 2006). "Enhanced biofilm formation and increased resistance to antimicrobial agents and bacterial invasion are caused by synergistic interactions in multispecies biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/AEM.03022-05. PMC 1489630. PMID 16751497.
Palovaara, Joakim; Akram, Neelam; Baltar, Federico; Bunse, Carina; Forsberg, Jeremy; Pedrós-Alió, Carlos; González, José M.; Pinhassi, Jarone (2014-08-18). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences. 111 (35): E3650-8. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. ISSN 0027-8424. PMC 4156726. PMID 25136122.

semanticscholar.org

api.semanticscholar.org

Zhou LY, Meng X, Zhong YL, Li GY, Du ZJ, Mu DS (March 2020). "Dokdonia sinensis sp. nov., a flavobacterium isolated from surface seawater". International Journal of Systematic and Evolutionary Microbiology. 70 (3): 1617–1622. doi:10.1099/ijsem.0.003949. PMID 32228747. S2CID 213159033.
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Park, Sooyeon; Won, Sung-Min; Yoon, Jung-Hoon (2018-09-01). "Dokdonia ponticola sp. nov., A Carrageenan-Degrading Bacterium of the Family Flavobacteriaceae Isolated from Seawater". Current Microbiology. 75 (9): 1126–1132. doi:10.1007/s00284-018-1496-y. ISSN 1432-0991. PMID 29761217. S2CID 46886165.

uniprot.org

"Dokdonia". www.uniprot.org.

worldcat.org

search.worldcat.org

Burmølle, Mette; Webb, Jeremy S.; Rao, Dhana; Hansen, Lars H.; Sørensen, Søren J.; Kjelleberg, Staffan (June 2006). "Enhanced Biofilm Formation and Increased Resistance to Antimicrobial Agents and Bacterial Invasion Are Caused by Synergistic Interactions in Multispecies Biofilms". Applied and Environmental Microbiology. 72 (6): 3916–3923. Bibcode:2006ApEnM..72.3916B. doi:10.1128/aem.03022-05. ISSN 0099-2240. PMC 1489630. PMID 16751497.
Lombard, Fabien; Boss, Emmanuel; Waite, Anya M.; Vogt, Meike; Uitz, Julia; Stemmann, Lars; Sosik, Heidi M.; Schulz, Jan; Romagnan, Jean-Baptiste; Picheral, Marc; Pearlman, Jay (2019). "Globally Consistent Quantitative Observations of Planktonic Ecosystems". Frontiers in Marine Science. 6. doi:10.3389/fmars.2019.00196. hdl:20.500.11850/343600. ISSN 2296-7745.
Park, Sooyeon; Won, Sung-Min; Yoon, Jung-Hoon (2018-09-01). "Dokdonia ponticola sp. nov., A Carrageenan-Degrading Bacterium of the Family Flavobacteriaceae Isolated from Seawater". Current Microbiology. 75 (9): 1126–1132. doi:10.1007/s00284-018-1496-y. ISSN 1432-0991. PMID 29761217. S2CID 46886165.
Bratlie, Marit S; Johansen, Jostein; Drabløs, Finn (2010-01-28). "Relationship between operon preference and functional properties of persistent genes in bacterial genomes". BMC Genomics. 11 (1): 71. doi:10.1186/1471-2164-11-71. ISSN 1471-2164. PMC 2837039. PMID 20109203.
Dufayard, J.-F.; Duret, L.; Penel, S.; Gouy, M.; Rechenmann, F.; Perriere, G. (2005-02-15). "Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases". Bioinformatics. 21 (11): 2596–2603. doi:10.1093/bioinformatics/bti325. ISSN 1367-4803. PMID 15713731.
Posacka AM, Semeniuk DM, Maldonado MT (2019-02-05). "Effects of Copper Availability on the Physiology of Marine Heterotrophic Bacteria". Frontiers in Marine Science. 5: 523. doi:10.3389/fmars.2018.00523. ISSN 2296-7745.
DeLong, Edward F.; Béjà, Oded (2010-04-27). "The Light-Driven Proton Pump Proteorhodopsin Enhances Bacterial Survival during Tough Times". PLOS Biology. 8 (4): e1000359. doi:10.1371/journal.pbio.1000359. ISSN 1545-7885. PMC 2860490. PMID 20436957.
Riedel, Thomas; Gómez-Consarnau, Laura; Tomasch, Jürgen; Martin, Madeleine; Jarek, Michael; González, José M.; Spring, Stefan; Rohlfs, Meike; Brinkhoff, Thorsten; Cypionka, Heribert; Göker, Markus (2013-03-04). "Genomics and Physiology of a Marine Flavobacterium Encoding a Proteorhodopsin and a Xanthorhodopsin-Like Protein". PLOS ONE. 8 (3): e57487. Bibcode:2013PLoSO...857487R. doi:10.1371/journal.pone.0057487. ISSN 1932-6203. PMC 3587595. PMID 23526944.
Gómez-Consarnau, Laura; Akram, Neelam; Lindell, Kristoffer; Pedersen, Anders; Neutze, Richard; Milton, Debra L.; González, José M.; Pinhassi, Jarone (2010-04-27). "Proteorhodopsin Phototrophy Promotes Survival of Marine Bacteria during Starvation". PLOS Biology. 8 (4): e1000358. doi:10.1371/journal.pbio.1000358. ISSN 1545-7885. PMC 2860489. PMID 20436956.
Steindler, Laura; Schwalbach, Michael S.; Smith, Daniel P.; Chan, Francis; Giovannoni, Stephen J. (2011-05-09). "Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration". PLOS ONE. 6 (5): e19725. Bibcode:2011PLoSO...619725S. doi:10.1371/journal.pone.0019725. ISSN 1932-6203. PMC 3090418. PMID 21573025.
Basili M, Quero GM, Giovannelli D, Manini E, Vignaroli C, Avio CG, et al. (2020-05-07). "Major Role of Surrounding Environment in Shaping Biofilm Community Composition on Marine Plastic Debris". Frontiers in Marine Science. 7: 262. doi:10.3389/fmars.2020.00262. hdl:11566/277940. ISSN 2296-7745.
Koedooder, Coco; VanGeersdaële, Rémy; Guéneuguès, Audrey; Bouget, François-Yves; Obernosterer, Ingrid; Blain, Stéphane (2020-07-01). "The interplay between iron limitation, light and carbon in the proteorhodopsin-containing Photobacterium angustum S14". FEMS Microbiology Ecology. 96 (7): fiaa103. doi:10.1093/femsec/fiaa103. ISSN 0168-6496. PMID 32459302.
Palovaara, Joakim; Akram, Neelam; Baltar, Federico; Bunse, Carina; Forsberg, Jeremy; Pedrós-Alió, Carlos; González, José M.; Pinhassi, Jarone (2014-08-18). "Stimulation of growth by proteorhodopsin phototrophy involves regulation of central metabolic pathways in marine planktonic bacteria". Proceedings of the National Academy of Sciences. 111 (35): E3650-8. Bibcode:2014PNAS..111E3650P. doi:10.1073/pnas.1402617111. ISSN 0027-8424. PMC 4156726. PMID 25136122.
Posacka, Anna M.; Semeniuk, David M.; Maldonado, Maria T. (2019). "Effects of Copper Availability on the Physiology of Marine Heterotrophic Bacteria". Frontiers in Marine Science. 5. doi:10.3389/fmars.2018.00523. ISSN 2296-7745.