Flux balance analysis (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Flux balance analysis" in English language version.

refsWebsite

Global rank English rank

40nih.gov

4^th place

24doi.org

2^nd place

5semanticscholar.org

11^th place

8^th place

3harvard.edu

18^th place

17^th place

3github.com

383^rd place

320^th place

2web.archive.org

1^st place

2r-project.org

7,871^st place

5,225^th place

1whiterose.ac.uk

4,124^th place

2,320^th place

1worldcat.org

5^th place

1nature.com

234^th place

397^th place

1arxiv.org

69^th place

59^th place

1genomatica.com

low place

1metnetmaker.com

low place

1opencobra.github.io

low place

1wikidot.com

4,776^th place

4,391^st place

arxiv.org

Karp, P.D.; Paley, S.M.; Krummenacker, M.; et al. (2010). "Pathway Tools version 13.0: Integrated Software for Pathway/Genome Informatics and Systems Biology". Briefings in Bioinformatics. 11 (1): 40–79. arXiv:1510.03964. doi:10.1093/bib/bbp043. PMC 2810111. PMID 19955237.

doi.org

Ranganathan, Sridhar; Suthers, Patrick F.; Maranas, Costas D. (2010). "OptForce: An Optimization Procedure for Identifying All Genetic Manipulations Leading to Targeted Overproductions". PLOS Comput Biol. 6 (4): e1000744. Bibcode:2010PLSCB...6E0744R. doi:10.1371/journal.pcbi.1000744. PMC 2855329. PMID 20419153.
Lewis, NE; Abdel-Haleem, AM (2013). "The evolution of genome-scale models of cancer metabolism". Front. Physiol. 4: 237. doi:10.3389/fphys.2013.00237. PMC 3759783. PMID 24027532.
Raman, Karthik; Yeturu, Kalidas; Chandra, Nagasuma (2008). "targetTB: A Target Identification Pipeline for Mycobacterium tuberculosis Through an Interactome, Reactome and Genome-scale Structural Analysis". BMC Systems Biology. 2 (1): 109. doi:10.1186/1752-0509-2-109. PMC 2651862. PMID 19099550.
Yang, Hong; Roth, Charles M.; Ierapetritou, Marianthi G. (2009). "A rational design approach for amino acid supplementation in hepatocyte culture". Biotechnology and Bioengineering. 103 (6): 1176–1191. doi:10.1002/bit.22342. PMID 19422042. S2CID 13230467.
Raghunathan, Anu; Shin, Sookil; Daefler, Simon (2010). "Systems Approach to Investigating Host-pathogen Interactions in Infections with the Biothreat Agent Francisella. Constraints-based Model of Francisella tularensis". BMC Systems Biology. 4 (1): 118. doi:10.1186/1752-0509-4-118. PMC 2933595. PMID 20731870.
Papoutsakis, ET (1984). "Equations and calculations for fermentations of butyric acid bacteria". Biotechnology and Bioengineering. 26 (2): 174–187. doi:10.1002/bit.260260210. PMID 18551704. S2CID 25023799.
Fell, DA; Small, JR (1986). "Fat synthesis in adipose tissue. An examination of stoichiometric constraints". Biochem J. 238 (3): 781–786. doi:10.1042/bj2380781. PMC 1147204. PMID 3800960.
Edwards, J.; Ibarra, R.; Palsson, B. (2001). "In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data". Nature Biotechnology. 19 (2): 125–130. doi:10.1038/84379. PMID 11175725. S2CID 1619105.
Raghunathan, A.; et al. (2009). "Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction". BMC Systems Biology. 3: 38. doi:10.1186/1752-0509-3-38. PMC 2678070. PMID 19356237.
Hoek, Milan J. A. van; Merks, Roeland M. H. (2017-05-16). "Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism". BMC Systems Biology. 11 (1): 56. doi:10.1186/s12918-017-0430-4. ISSN 1752-0509. PMC 5434578. PMID 28511646.
Orth, J.D.; Thiele, I.; Palsson, B.Ø. (2010). "What is flux balance analysis?". Nature Biotechnology. 28 (3): 245–248. doi:10.1038/nbt.1614. PMC 3108565. PMID 20212490.
Lee, J.M.; Gianchandani, E.P.; Papin, J.A. (2006). "Flux balance analysis in the era of metabolomics". Briefings in Bioinformatics. 7 (2): 140–50. doi:10.1093/bib/bbl007. PMID 16772264.
Feist, A.M.; Palsson, B.Ø. (2008). "The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli". Nature Biotechnology. 26 (6): 659–67. doi:10.1038/nbt1401. PMC 3108568. PMID 18536691.
Lewis, N.E.; Nagarajan, H.; Palsson, B.Ø. (2012). "Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods". Nature Reviews Microbiology. 10 (4): 291–305. doi:10.1038/nrmicro2737. PMC 3536058. PMID 22367118.
Karp, P.D.; Paley, S.M.; Krummenacker, M.; et al. (2010). "Pathway Tools version 13.0: Integrated Software for Pathway/Genome Informatics and Systems Biology". Briefings in Bioinformatics. 11 (1): 40–79. arXiv:1510.03964. doi:10.1093/bib/bbp043. PMC 2810111. PMID 19955237.
Latendresse, M.; Krummenacker, M.; Trupp, M.; Karp, P.D. (2012). "Construction and completion of flux balance models from pathway databases". Bioinformatics. 28 (388–96): 388–96. doi:10.1093/bioinformatics/btr681. PMC 3268246. PMID 22262672.
Becker, S.A.; et al. (2007). "Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox". Nature Protocols. 2 (3): 727–38. doi:10.1038/nprot.2007.99. PMID 17406635. S2CID 5687582.
Gevorgyan, A; Bushell, ME; Avignone-Rossa, C; Kierzek, AM (2011). "SurreyFBA: a command line tool and graphics user interface for constraint-based modeling of genome-scale metabolic reaction networks". Bioinformatics. 27 (3): 433–4. doi:10.1093/bioinformatics/btq679. PMID 21148545.
Boele, J; Olivier, BG; Teusink, B (2012). "FAME: the Flux Analysis and Modeling Environment". BMC Syst Biol. 6 (1): 8. doi:10.1186/1752-0509-6-8. PMC 3317868. PMID 22289213.
Lakshmanan, M; Koh, G; Chung, BK; Lee, DY (Jan 2014). "Software applications for flux balance analysis". Briefings in Bioinformatics. 15 (1): 108–22. doi:10.1093/bib/bbs069. PMID 23131418.
Gelius-Dietrich, G.; Amer Desouki, A.; Fritzemeier, C.J.; Lercher, M.J. (2013). "sybil – Efficient constraint-based modelling in R." BMC Systems Biology. 7 (1): 125. doi:10.1186/1752-0509-7-125. PMC 3843580. PMID 24224957. Software available at https://cran.r-project.org/package=sybil
Kotte, O.; Zaugg, J. B.; Heinemann, M. (2010). "Bacterial adaptation through distributed sensing of metabolic fluxes". Molecular Systems Biology. 6 (355): 355. doi:10.1038/msb.2010.10. PMC 2858440. PMID 20212527.
Ibarra, Rafael U.; Edwards, Jeremy S.; Palsson, Bernhard O. (2002). "Escherichia Coli K-12 Undergoes Adaptive Evolution to Achieve in Silico Predicted Optimal Growth". Nature. 420 (6912): 186–189. Bibcode:2002Natur.420..186I. doi:10.1038/nature01149. PMID 12432395. S2CID 4415915.
Segrè, Daniel; Vitkup, Dennis; Church, George M. (2002). "Analysis of Optimality in Natural and Perturbed Metabolic Networks". Proceedings of the National Academy of Sciences. 99 (23): 15112–15117. Bibcode:2002PNAS...9915112S. doi:10.1073/pnas.232349399. PMC 137552. PMID 12415116.

genomatica.com

"Genomatica | Technology: Technology Suite". Archived from the original on 2010-04-21. Retrieved 2010-03-11.

github.com

"Genome-scale metabolic model reconstruction with CarveMe". GitHub. 28 October 2021.
"MIOM: Constraint-based modeling of metabolism using Mixed Integer Optimization". GitHub. 26 July 2021.
"Constraint-Based Reconstruction and Exascale Analysis". GitHub. 16 May 2021.

harvard.edu

ui.adsabs.harvard.edu

Ranganathan, Sridhar; Suthers, Patrick F.; Maranas, Costas D. (2010). "OptForce: An Optimization Procedure for Identifying All Genetic Manipulations Leading to Targeted Overproductions". PLOS Comput Biol. 6 (4): e1000744. Bibcode:2010PLSCB...6E0744R. doi:10.1371/journal.pcbi.1000744. PMC 2855329. PMID 20419153.
Ibarra, Rafael U.; Edwards, Jeremy S.; Palsson, Bernhard O. (2002). "Escherichia Coli K-12 Undergoes Adaptive Evolution to Achieve in Silico Predicted Optimal Growth". Nature. 420 (6912): 186–189. Bibcode:2002Natur.420..186I. doi:10.1038/nature01149. PMID 12432395. S2CID 4415915.
Segrè, Daniel; Vitkup, Dennis; Church, George M. (2002). "Analysis of Optimality in Natural and Perturbed Metabolic Networks". Proceedings of the National Academy of Sciences. 99 (23): 15112–15117. Bibcode:2002PNAS...9915112S. doi:10.1073/pnas.232349399. PMC 137552. PMID 12415116.

metnetmaker.com

"MetNetMaker on Tom's Personal Page".

nature.com

"Archived copy". Archived from the original on 2008-02-01. Retrieved 2007-12-01.{{cite web}}: CS1 maint: archived copy as title (link)

nih.gov

pubmed.ncbi.nlm.nih.gov

Ranganathan, Sridhar; Suthers, Patrick F.; Maranas, Costas D. (2010). "OptForce: An Optimization Procedure for Identifying All Genetic Manipulations Leading to Targeted Overproductions". PLOS Comput Biol. 6 (4): e1000744. Bibcode:2010PLSCB...6E0744R. doi:10.1371/journal.pcbi.1000744. PMC 2855329. PMID 20419153.
Lewis, NE; Abdel-Haleem, AM (2013). "The evolution of genome-scale models of cancer metabolism". Front. Physiol. 4: 237. doi:10.3389/fphys.2013.00237. PMC 3759783. PMID 24027532.
Raman, Karthik; Yeturu, Kalidas; Chandra, Nagasuma (2008). "targetTB: A Target Identification Pipeline for Mycobacterium tuberculosis Through an Interactome, Reactome and Genome-scale Structural Analysis". BMC Systems Biology. 2 (1): 109. doi:10.1186/1752-0509-2-109. PMC 2651862. PMID 19099550.
Yang, Hong; Roth, Charles M.; Ierapetritou, Marianthi G. (2009). "A rational design approach for amino acid supplementation in hepatocyte culture". Biotechnology and Bioengineering. 103 (6): 1176–1191. doi:10.1002/bit.22342. PMID 19422042. S2CID 13230467.
Raghunathan, Anu; Shin, Sookil; Daefler, Simon (2010). "Systems Approach to Investigating Host-pathogen Interactions in Infections with the Biothreat Agent Francisella. Constraints-based Model of Francisella tularensis". BMC Systems Biology. 4 (1): 118. doi:10.1186/1752-0509-4-118. PMC 2933595. PMID 20731870.
Papoutsakis, ET (1984). "Equations and calculations for fermentations of butyric acid bacteria". Biotechnology and Bioengineering. 26 (2): 174–187. doi:10.1002/bit.260260210. PMID 18551704. S2CID 25023799.
Fell, DA; Small, JR (1986). "Fat synthesis in adipose tissue. An examination of stoichiometric constraints". Biochem J. 238 (3): 781–786. doi:10.1042/bj2380781. PMC 1147204. PMID 3800960.
Edwards, J.; Ibarra, R.; Palsson, B. (2001). "In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data". Nature Biotechnology. 19 (2): 125–130. doi:10.1038/84379. PMID 11175725. S2CID 1619105.
Raghunathan, A.; et al. (2009). "Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction". BMC Systems Biology. 3: 38. doi:10.1186/1752-0509-3-38. PMC 2678070. PMID 19356237.
Hoek, Milan J. A. van; Merks, Roeland M. H. (2017-05-16). "Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism". BMC Systems Biology. 11 (1): 56. doi:10.1186/s12918-017-0430-4. ISSN 1752-0509. PMC 5434578. PMID 28511646.
Orth, J.D.; Thiele, I.; Palsson, B.Ø. (2010). "What is flux balance analysis?". Nature Biotechnology. 28 (3): 245–248. doi:10.1038/nbt.1614. PMC 3108565. PMID 20212490.
Lee, J.M.; Gianchandani, E.P.; Papin, J.A. (2006). "Flux balance analysis in the era of metabolomics". Briefings in Bioinformatics. 7 (2): 140–50. doi:10.1093/bib/bbl007. PMID 16772264.
Feist, A.M.; Palsson, B.Ø. (2008). "The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli". Nature Biotechnology. 26 (6): 659–67. doi:10.1038/nbt1401. PMC 3108568. PMID 18536691.
Lewis, N.E.; Nagarajan, H.; Palsson, B.Ø. (2012). "Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods". Nature Reviews Microbiology. 10 (4): 291–305. doi:10.1038/nrmicro2737. PMC 3536058. PMID 22367118.
Karp, P.D.; Paley, S.M.; Krummenacker, M.; et al. (2010). "Pathway Tools version 13.0: Integrated Software for Pathway/Genome Informatics and Systems Biology". Briefings in Bioinformatics. 11 (1): 40–79. arXiv:1510.03964. doi:10.1093/bib/bbp043. PMC 2810111. PMID 19955237.
Latendresse, M.; Krummenacker, M.; Trupp, M.; Karp, P.D. (2012). "Construction and completion of flux balance models from pathway databases". Bioinformatics. 28 (388–96): 388–96. doi:10.1093/bioinformatics/btr681. PMC 3268246. PMID 22262672.
Becker, S.A.; et al. (2007). "Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox". Nature Protocols. 2 (3): 727–38. doi:10.1038/nprot.2007.99. PMID 17406635. S2CID 5687582.
Gevorgyan, A; Bushell, ME; Avignone-Rossa, C; Kierzek, AM (2011). "SurreyFBA: a command line tool and graphics user interface for constraint-based modeling of genome-scale metabolic reaction networks". Bioinformatics. 27 (3): 433–4. doi:10.1093/bioinformatics/btq679. PMID 21148545.
Boele, J; Olivier, BG; Teusink, B (2012). "FAME: the Flux Analysis and Modeling Environment". BMC Syst Biol. 6 (1): 8. doi:10.1186/1752-0509-6-8. PMC 3317868. PMID 22289213.
Lakshmanan, M; Koh, G; Chung, BK; Lee, DY (Jan 2014). "Software applications for flux balance analysis". Briefings in Bioinformatics. 15 (1): 108–22. doi:10.1093/bib/bbs069. PMID 23131418.
Gelius-Dietrich, G.; Amer Desouki, A.; Fritzemeier, C.J.; Lercher, M.J. (2013). "sybil – Efficient constraint-based modelling in R." BMC Systems Biology. 7 (1): 125. doi:10.1186/1752-0509-7-125. PMC 3843580. PMID 24224957. Software available at https://cran.r-project.org/package=sybil
Kotte, O.; Zaugg, J. B.; Heinemann, M. (2010). "Bacterial adaptation through distributed sensing of metabolic fluxes". Molecular Systems Biology. 6 (355): 355. doi:10.1038/msb.2010.10. PMC 2858440. PMID 20212527.
Ibarra, Rafael U.; Edwards, Jeremy S.; Palsson, Bernhard O. (2002). "Escherichia Coli K-12 Undergoes Adaptive Evolution to Achieve in Silico Predicted Optimal Growth". Nature. 420 (6912): 186–189. Bibcode:2002Natur.420..186I. doi:10.1038/nature01149. PMID 12432395. S2CID 4415915.
Segrè, Daniel; Vitkup, Dennis; Church, George M. (2002). "Analysis of Optimality in Natural and Perturbed Metabolic Networks". Proceedings of the National Academy of Sciences. 99 (23): 15112–15117. Bibcode:2002PNAS...9915112S. doi:10.1073/pnas.232349399. PMC 137552. PMID 12415116.

ncbi.nlm.nih.gov

Ranganathan, Sridhar; Suthers, Patrick F.; Maranas, Costas D. (2010). "OptForce: An Optimization Procedure for Identifying All Genetic Manipulations Leading to Targeted Overproductions". PLOS Comput Biol. 6 (4): e1000744. Bibcode:2010PLSCB...6E0744R. doi:10.1371/journal.pcbi.1000744. PMC 2855329. PMID 20419153.
Lewis, NE; Abdel-Haleem, AM (2013). "The evolution of genome-scale models of cancer metabolism". Front. Physiol. 4: 237. doi:10.3389/fphys.2013.00237. PMC 3759783. PMID 24027532.
Raman, Karthik; Yeturu, Kalidas; Chandra, Nagasuma (2008). "targetTB: A Target Identification Pipeline for Mycobacterium tuberculosis Through an Interactome, Reactome and Genome-scale Structural Analysis". BMC Systems Biology. 2 (1): 109. doi:10.1186/1752-0509-2-109. PMC 2651862. PMID 19099550.
Raghunathan, Anu; Shin, Sookil; Daefler, Simon (2010). "Systems Approach to Investigating Host-pathogen Interactions in Infections with the Biothreat Agent Francisella. Constraints-based Model of Francisella tularensis". BMC Systems Biology. 4 (1): 118. doi:10.1186/1752-0509-4-118. PMC 2933595. PMID 20731870.
Fell, DA; Small, JR (1986). "Fat synthesis in adipose tissue. An examination of stoichiometric constraints". Biochem J. 238 (3): 781–786. doi:10.1042/bj2380781. PMC 1147204. PMID 3800960.
Raghunathan, A.; et al. (2009). "Constraint-based analysis of metabolic capacity of Salmonella typhimurium during host-pathogen interaction". BMC Systems Biology. 3: 38. doi:10.1186/1752-0509-3-38. PMC 2678070. PMID 19356237.
Hoek, Milan J. A. van; Merks, Roeland M. H. (2017-05-16). "Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism". BMC Systems Biology. 11 (1): 56. doi:10.1186/s12918-017-0430-4. ISSN 1752-0509. PMC 5434578. PMID 28511646.
Orth, J.D.; Thiele, I.; Palsson, B.Ø. (2010). "What is flux balance analysis?". Nature Biotechnology. 28 (3): 245–248. doi:10.1038/nbt.1614. PMC 3108565. PMID 20212490.
Feist, A.M.; Palsson, B.Ø. (2008). "The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli". Nature Biotechnology. 26 (6): 659–67. doi:10.1038/nbt1401. PMC 3108568. PMID 18536691.
Lewis, N.E.; Nagarajan, H.; Palsson, B.Ø. (2012). "Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods". Nature Reviews Microbiology. 10 (4): 291–305. doi:10.1038/nrmicro2737. PMC 3536058. PMID 22367118.
Karp, P.D.; Paley, S.M.; Krummenacker, M.; et al. (2010). "Pathway Tools version 13.0: Integrated Software for Pathway/Genome Informatics and Systems Biology". Briefings in Bioinformatics. 11 (1): 40–79. arXiv:1510.03964. doi:10.1093/bib/bbp043. PMC 2810111. PMID 19955237.
Latendresse, M.; Krummenacker, M.; Trupp, M.; Karp, P.D. (2012). "Construction and completion of flux balance models from pathway databases". Bioinformatics. 28 (388–96): 388–96. doi:10.1093/bioinformatics/btr681. PMC 3268246. PMID 22262672.
Boele, J; Olivier, BG; Teusink, B (2012). "FAME: the Flux Analysis and Modeling Environment". BMC Syst Biol. 6 (1): 8. doi:10.1186/1752-0509-6-8. PMC 3317868. PMID 22289213.
Gelius-Dietrich, G.; Amer Desouki, A.; Fritzemeier, C.J.; Lercher, M.J. (2013). "sybil – Efficient constraint-based modelling in R." BMC Systems Biology. 7 (1): 125. doi:10.1186/1752-0509-7-125. PMC 3843580. PMID 24224957. Software available at https://cran.r-project.org/package=sybil
Kotte, O.; Zaugg, J. B.; Heinemann, M. (2010). "Bacterial adaptation through distributed sensing of metabolic fluxes". Molecular Systems Biology. 6 (355): 355. doi:10.1038/msb.2010.10. PMC 2858440. PMID 20212527.
Segrè, Daniel; Vitkup, Dennis; Church, George M. (2002). "Analysis of Optimality in Natural and Perturbed Metabolic Networks". Proceedings of the National Academy of Sciences. 99 (23): 15112–15117. Bibcode:2002PNAS...9915112S. doi:10.1073/pnas.232349399. PMC 137552. PMID 12415116.

opencobra.github.io

"COBRApy: Constraint-Based Reconstruction and Analysis in Python". GitHub. 2013.

r-project.org

cran.r-project.org

Gelius-Dietrich, G.; Amer Desouki, A.; Fritzemeier, C.J.; Lercher, M.J. (2013). "sybil – Efficient constraint-based modelling in R." BMC Systems Biology. 7 (1): 125. doi:10.1186/1752-0509-7-125. PMC 3843580. PMID 24224957. Software available at https://cran.r-project.org/package=sybil
Gangadharan A. Rohatgi N. abcdeFBA: Functions for Constraint Based Simulation using Flux Balance Analysis and informative analysis of the data generated during simulation. Available at: https://cran.r-project.org/web/packages/abcdeFBA/

semanticscholar.org

api.semanticscholar.org

Yang, Hong; Roth, Charles M.; Ierapetritou, Marianthi G. (2009). "A rational design approach for amino acid supplementation in hepatocyte culture". Biotechnology and Bioengineering. 103 (6): 1176–1191. doi:10.1002/bit.22342. PMID 19422042. S2CID 13230467.
Papoutsakis, ET (1984). "Equations and calculations for fermentations of butyric acid bacteria". Biotechnology and Bioengineering. 26 (2): 174–187. doi:10.1002/bit.260260210. PMID 18551704. S2CID 25023799.
Edwards, J.; Ibarra, R.; Palsson, B. (2001). "In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data". Nature Biotechnology. 19 (2): 125–130. doi:10.1038/84379. PMID 11175725. S2CID 1619105.
Becker, S.A.; et al. (2007). "Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox". Nature Protocols. 2 (3): 727–38. doi:10.1038/nprot.2007.99. PMID 17406635. S2CID 5687582.
Ibarra, Rafael U.; Edwards, Jeremy S.; Palsson, Bernhard O. (2002). "Escherichia Coli K-12 Undergoes Adaptive Evolution to Achieve in Silico Predicted Optimal Growth". Nature. 420 (6912): 186–189. Bibcode:2002Natur.420..186I. doi:10.1038/nature01149. PMID 12432395. S2CID 4415915.

web.archive.org

"Archived copy". Archived from the original on 2008-02-01. Retrieved 2007-12-01.{{cite web}}: CS1 maint: archived copy as title (link)
"Genomatica | Technology: Technology Suite". Archived from the original on 2010-04-21. Retrieved 2010-03-11.

whiterose.ac.uk

etheses.whiterose.ac.uk

Forth, Thomas (2012). Metabolic systems biology of the malaria parasite. Leeds, UK: University of Leeds. ISBN 978-0-85731-297-6.

wikidot.com

cobramethods.wikidot.com

"CoBRA Methods - Constraint-based analysis".

worldcat.org

search.worldcat.org

Hoek, Milan J. A. van; Merks, Roeland M. H. (2017-05-16). "Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism". BMC Systems Biology. 11 (1): 56. doi:10.1186/s12918-017-0430-4. ISSN 1752-0509. PMC 5434578. PMID 28511646.