Folding@home (English Wikipedia)

Pronk, Sander; Larsson, Per; Pouya, Iman; Bowman, Gregory R.; Haque, Imran S.; Beauchamp, Kyle; Hess, Berk; Pande, Vijay S.; Kasson, Peter M.; Lindahl, Erik (November 12, 2011). "Copernicus: A new paradigm for parallel adaptive molecular dynamics". Proceedings of 2011 International Conference for High Performance Computing, Networking, Storage and Analysis. ACM. pp. 1–10. doi:10.1145/2063384.2063465. ISBN 978-1-4503-0771-0.

portal.acm.org

Nov, Oded; Arazy, Ofer; Anderson, David (2011). "Dusting for science". Proceedings of the 2011 iConference. IConference '11. Seattle, Washington: ACM Press. pp. 68–74. doi:10.1145/1940761.1940771. ISBN 978-1-4503-0121-3. S2CID 12219985.

adsabs.harvard.edu (Global: 14^th place; English: 9^th place)

ui.adsabs.harvard.edu

Gregory R. Bowman; Vijay S. Pande (2010). "Protein folded states are kinetic hubs". Proceedings of the National Academy of Sciences. 107 (24): 10890–5. Bibcode:2010PNAS..10710890B. doi:10.1073/pnas.1003962107. PMC 2890711. PMID 20534497.
Christopher D. Snow; Houbi Nguyen; Vijay S. Pande; Martin Gruebele (2002). "Absolute comparison of simulated and experimental protein-folding dynamics" (PDF). Nature. 420 (6911): 102–106. Bibcode:2002Natur.420..102S. doi:10.1038/nature01160. PMID 12422224. S2CID 1061159. Archived from the original (PDF) on March 24, 2012.
Fabrizio Marinelli; Fabio Pietrucci; Alessandro Laio; Stefano Piana (2009). Pande, Vijay S. (ed.). "A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations". PLOS Computational Biology. 5 (8) e1000452. Bibcode:2009PLSCB...5E0452M. doi:10.1371/journal.pcbi.1000452. PMC 2711228. PMID 19662155.
Gregory R. Bowman; Daniel L. Ensign; Vijay S. Pande (2010). "Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models". Journal of Chemical Theory and Computation. 6 (3): 787–794. Bibcode:2010JCTC....6..787B. doi:10.1021/ct900620b. PMC 3637129. PMID 23626502.
Kyle A. Beauchamp; Daniel L. Ensign; Rhiju Das; Vijay S. Pande (2011). "Quantitative comparison of villin headpiece subdomain simulations and triplet–triplet energy transfer experiments". Proceedings of the National Academy of Sciences. 108 (31): 12734–9. Bibcode:2011PNAS..10812734B. doi:10.1073/pnas.1010880108. PMC 3150881. PMID 21768345.
Fred E. Cohen; Jeffery W. Kelly (2003). "Therapeutic approaches to protein misfolding diseases". Nature (review). 426 (6968): 905–9. Bibcode:2003Natur.426..905C. doi:10.1038/nature02265. PMID 14685252. S2CID 4421600.
Del Lucent; V. Vishal; Vijay S. Pande (2007). "Protein folding under confinement: A role for solvent". Proceedings of the National Academy of Sciences of the United States of America. 104 (25): 10430–10434. Bibcode:2007PNAS..10410430L. doi:10.1073/pnas.0608256104. PMC 1965530. PMID 17563390.
Vincent A. Voelz; Vijay R. Singh; William J. Wedemeyer; Lisa J. Lapidus; Vijay S. Pande (2010). "Unfolded-State Dynamics and Structure of Protein L Characterized by Simulation and Experiment". Journal of the American Chemical Society. 132 (13): 4702–4709. Bibcode:2010JAChS.132.4702V. doi:10.1021/ja908369h. PMC 2853762. PMID 20218718.
Nicholas W. Kelley; V. Vishal; Grant A. Krafft; Vijay S. Pande. (2008). "Simulating oligomerization at experimental concentrations and long timescales: A Markov state model approach". Journal of Chemical Physics. 129 (21): 214707. Bibcode:2008JChPh.129u4707K. doi:10.1063/1.3010881. PMC 2674793. PMID 19063575.
P. Novick; J. Rajadas; C.W. Liu; N. W. Kelley; M. Inayathullah; V. S. Pande (2011). Buehler, Markus J. (ed.). "Rationally Designed Turn Promoting Mutation in the Amyloid-β Peptide Sequence Stabilizes Oligomers in Solution". PLOS ONE. 6 (7) e21776. Bibcode:2011PLoSO...621776R. doi:10.1371/journal.pone.0021776. PMC 3142112. PMID 21799748.
M Hollstein; D Sidransky; B Vogelstein; CC Harris (1991). "p53 mutations in human cancers". Science. 253 (5015): 49–53. Bibcode:1991Sci...253...49H. doi:10.1126/science.1905840. PMID 1905840. S2CID 38527914.
Aron M. Levin; Darren L. Bates; Aaron M. Ring; Carsten Krieg; Jack T. Lin; Leon Su; Ignacio Moraga; Miro E. Raeber; Gregory R. Bowman; Paul Novick; Vijay S. Pande; C. Garrison Fathman; Onur Boyman; K. Christopher Garcia (2012). "Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'". Nature. 484 (7395): 529–33. Bibcode:2012Natur.484..529L. doi:10.1038/nature10975. PMC 3338870. PMID 22446627.
Gautieri A, Uzel S, Vesentini S, Redaelli A, Buehler MJ (2009). "Molecular and mesoscale disease mechanisms of Osteogenesis Imperfecta". Biophysical Journal. 97 (3): 857–865. Bibcode:2009BpJ....97..857G. doi:10.1016/j.bpj.2009.04.059. PMC 2718154. PMID 19651044.
Sanghyun Park; Randall J. Radmer; Teri E. Klein; Vijay S. Pande (2005). "A New Set of Molecular Mechanics Parameters for Hydroxyproline and Its Use in Molecular Dynamics Simulations of Collagen-Like Peptides". Journal of Computational Chemistry. 26 (15): 1612–1616. Bibcode:2005JCoCh..26.1612P. doi:10.1002/jcc.20301. PMID 16170799. S2CID 13051327.
Peter M. Kasson; Daniel L. Ensign; Vijay S. Pande (2009). "Combining Molecular Dynamics with Bayesian Analysis To Predict and Evaluate Ligand-Binding Mutations in Influenza Hemagglutinin". Journal of the American Chemical Society. 131 (32): 11338–11340. Bibcode:2009JAChS.13111338K. doi:10.1021/ja904557w. PMC 2737089. PMID 19637916.
Guha Jayachandran; M. R. Shirts; S. Park; V. S. Pande (2006). "Parallelized-Over-Parts Computation of Absolute Binding Free Energy with Docking and Molecular Dynamics". Journal of Chemical Physics. 125 (8): 084901. Bibcode:2006JChPh.125h4901J. doi:10.1063/1.2221680. PMID 16965051.
Gregory R. Bowman; Phillip L. Geissler (July 2012). "Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites". PNAS. 109 (29): 11681–6. Bibcode:2012PNAS..10911681B. doi:10.1073/pnas.1209309109. PMC 3406870. PMID 22753506.
Paula M. Petrone; Christopher D. Snow; Del Lucent; Vijay S. Pande (2008). "Side-chain recognition and gating in the ribosome exit tunnel". Proceedings of the National Academy of Sciences. 105 (43): 16549–54. Bibcode:2008PNAS..10516549P. doi:10.1073/pnas.0801795105. PMC 2575457. PMID 18946046.
Raddick, M. Jordan; Bracey, Georgia; Gay, Pamela L.; Lintott, Chris J.; Murray, Phil; Schawinski, Kevin; Szalay, Alexander S.; Vandenberg, Jan (December 2010). "Galaxy Zoo: Exploring the Motivations of Citizen Science Volunteers". Astronomy Education Review. 9 (1): 010103. arXiv:0909.2925. Bibcode:2010AEdRv...9a0103R. doi:10.3847/AER2009036. S2CID 118372704.
Colwell, B. (March 2004). "The Zen of overclocking". Computer. 37 (3): 9–12. Bibcode:2004Compr..37c...9C. doi:10.1109/MC.2004.1273994. ISSN 0018-9162. S2CID 21582410.
Darch, Peter; Carusi, Annamaria (September 13, 2010). "Retaining volunteers in volunteer computing projects". Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 368 (1926): 4177–4192. Bibcode:2010RSPTA.368.4177D. doi:10.1098/rsta.2010.0163. PMID 20679130. S2CID 1675353.
Michael Gross (2012). "Folding research recruits unconventional help". Current Biology. 22 (2): R35–R38. Bibcode:2012CBio...22..R35G. doi:10.1016/j.cub.2012.01.008. PMID 22389910.
Carsten Kutzner; David Van Der Spoel; Martin Fechner; Erik Lindahl; Udo W. Schmitt; Bert L. De Groot; Helmut Grubmüller (2007). "Speeding up parallel GROMACS on high-latency networks". Journal of Computational Chemistry. 28 (12): 2075–2084. Bibcode:2007JCoCh..28.2075K. doi:10.1002/jcc.20703. hdl:11858/00-001M-0000-0012-E29A-0. PMID 17405124. S2CID 519769.
Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl (2008). "GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation". Journal of Chemical Theory and Computation. 4 (3): 435–447. Bibcode:2008JCTC....4..435H. doi:10.1021/ct700301q. hdl:11858/00-001M-0000-0012-DDBF-0. PMID 26620784. S2CID 1142192.
M. S. Friedrichs; P. Eastman; V. Vaidyanathan; M. Houston; S. LeGrand; A. L. Beberg; D. L. Ensign; C. M. Bruns; V. S. Pande (2009). "Accelerating Molecular Dynamic Simulation on Graphics Processing Units". Journal of Computational Chemistry. 30 (6): 864–72. Bibcode:2009JCoCh..30..864F. doi:10.1002/jcc.21209. PMC 2724265. PMID 19191337.
Phineus R. L. Markwick; J. Andrew McCammon (2011). "Studying functional dynamics in bio-molecules using accelerated molecular dynamics". Physical Chemistry Chemical Physics. 13 (45): 20053–65. Bibcode:2011PCCP...1320053M. doi:10.1039/C1CP22100K. PMID 22015376.
P. Eastman; V. S. Pande (2010). "OpenMM: A Hardware-Independent Framework for Molecular Simulations". Computing in Science and Engineering. 12 (4): 34–39. Bibcode:2010CSE....12d..34E. doi:10.1109/MCSE.2010.27. ISSN 1521-9615. PMC 4486654. PMID 26146490.
G. R. Bowman; V. S. Pande (2009). Hofmann, Andreas (ed.). "The Roles of Entropy and Kinetics in Structure Prediction". PLOS ONE. 4 (6) e5840. Bibcode:2009PLoSO...4.5840B. doi:10.1371/journal.pone.0005840. PMC 2688754. PMID 19513117.
Thomas J. Lane; Gregory R. Bowman; Kyle A Beauchamp; Vincent Alvin Voelz; Vijay S. Pande (2011). "Markov State Model Reveals Folding and Functional Dynamics in Ultra-Long MD Trajectories". Journal of the American Chemical Society. 133 (45): 18413–9. Bibcode:2011JAChS.13318413L. doi:10.1021/ja207470h. PMC 3227799. PMID 21988563.
David E. Shaw; et al. (2010). "Atomic-Level Characterization of the Structural Dynamics of Proteins". Science. 330 (6002): 341–346. Bibcode:2010Sci...330..341S. doi:10.1126/science.1187409. PMID 20947758. S2CID 3495023.

anandtech.com (Global: 1,850^th place; English: 1,272^nd place)

Shilov, Anton (March 25, 2020). "Folding@Home Reaches Exascale: 1,500,000,000,000,000,000 Operations Per Second for COVID-19". Anandtech. Archived from the original on July 22, 2025. Retrieved March 26, 2020.

arstechnica.com (Global: 473^rd place; English: 338^th place)

"The coronavirus pandemic turned Folding@Home into an exaFLOP supercomputer". April 14, 2020.

arxiv.org (Global: 49^th place; English: 31^st place)

Raddick, M. Jordan; Bracey, Georgia; Gay, Pamela L.; Lintott, Chris J.; Murray, Phil; Schawinski, Kevin; Szalay, Alexander S.; Vandenberg, Jan (December 2010). "Galaxy Zoo: Exploring the Motivations of Citizen Science Volunteers". Astronomy Education Review. 9 (1): 010103. arXiv:0909.2925. Bibcode:2010AEdRv...9a0103R. doi:10.3847/AER2009036. S2CID 118372704.
I. Haque; V. S. Pande (2010). "Hard Data on Soft Errors: A Large-Scale Assessment of Real-World Error Rates in GPGPU". 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing. pp. 691–696. arXiv:0910.0505. doi:10.1109/CCGRID.2010.84. ISBN 978-1-4244-6987-1. S2CID 10723933.

bakerlab.org (Global: low place; English: low place)

boinc.bakerlab.org

Gen_X_Accord, Vijay Pande (June 11, 2006). "Folding@home vs. Rosetta@home". Rosetta@home forums. University of Washington. Archived from the original on August 8, 2014. Retrieved September 20, 2012.

benthamscience.com (Global: low place; English: low place)

Vittorio Bellotti; Monica Stoppini (2009). "Protein Misfolding Diseases" (PDF). The Open Biology Journal. 2 (2): 228–234. Archived from the original (PDF) on February 22, 2014.

biophysics.org (Global: low place; English: low place)

"Biophysical Society Names Five 2012 Award Recipients". Biophysics.org. Biophysical Society. August 17, 2011. Archived from the original on March 27, 2012. Retrieved September 20, 2012.

blackhat.com (Global: low place; English: low place)

"Fixing/Making Holes in ELF Binaries/Programs". Black Hat.
"Certificate Bypass: Hiding and Executing Malware from a Digitally Signed Executable" (PDF). BlackHat.com. Deep Instinct. August 2016.

boarddigger.com (Global: low place; English: low place)

Rattledagger, Vijay Pande (April 1, 2005). "Folding@home client for BOINC in beta "soon"". Boarddigger.com. Anandtech.com. Archived from the original on September 17, 2012. Retrieved September 20, 2012.

books.google.com (Global: 3^rd place; English: 3^rd place)

Fratzl, Peter (May 10, 2008). Collagen: structure and mechanics. Springer. ISBN 978-0-387-73905-2. Retrieved March 17, 2012.

castroller.com (Global: low place; English: low place)

"Futures in Biotech 27: Folding@home at 1.3 Petaflops". Castroller.com. CastRoller. December 28, 2007. Archived from the original (Interview, webcast) on November 29, 2011. Retrieved September 20, 2012.

cnn.com (Global: 36^th place; English: 26^th place)

edition.cnn.com

David E. Williams (October 20, 2006). "PlayStation's serious side: Fighting disease". CNN. Archived from the original on June 22, 2012. Retrieved September 20, 2012.

copernicus-computing.org (Global: low place; English: low place)

Sander Pronk; Iman Pouya; Per Larsson; Peter Kasson; Erik Lindahl (November 17, 2011). "Copernicus Download". copernicus-computing.org. Copernicus. Archived from the original on October 7, 2012. Retrieved October 2, 2012.

docs.google.com (Global: 877^th place; English: 850^th place)

Risto Kantonen (September 23, 2013). "Folding@home Stats - Google Docs". Folding@home. Retrieved September 23, 2013.^{[permanent dead link]}

doi.org (Global: 2^nd place; English: 2^nd place)

V. S. Pande; K. Beauchamp; G. R. Bowman (2010). "Everything you wanted to know about Markov State Models but were afraid to ask". Methods. 52 (1): 99–105. doi:10.1016/j.ymeth.2010.06.002. PMC 2933958. PMID 20570730.
Vincent A. Voelz; Gregory R. Bowman; Kyle Beauchamp; Vijay S. Pande (2010). "Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1–39)". Journal of the American Chemical Society. 132 (5): 1526–1528. doi:10.1021/ja9090353. PMC 2835335. PMID 20070076.
Gregory R. Bowman; Vijay S. Pande (2010). "Protein folded states are kinetic hubs". Proceedings of the National Academy of Sciences. 107 (24): 10890–5. Bibcode:2010PNAS..10710890B. doi:10.1073/pnas.1003962107. PMC 2890711. PMID 20534497.
Christopher D. Snow; Houbi Nguyen; Vijay S. Pande; Martin Gruebele (2002). "Absolute comparison of simulated and experimental protein-folding dynamics" (PDF). Nature. 420 (6911): 102–106. Bibcode:2002Natur.420..102S. doi:10.1038/nature01160. PMID 12422224. S2CID 1061159. Archived from the original (PDF) on March 24, 2012.
Fabrizio Marinelli; Fabio Pietrucci; Alessandro Laio; Stefano Piana (2009). Pande, Vijay S. (ed.). "A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations". PLOS Computational Biology. 5 (8) e1000452. Bibcode:2009PLSCB...5E0452M. doi:10.1371/journal.pcbi.1000452. PMC 2711228. PMID 19662155.
"So Much More to Know". Science. 309 (5731): 78–102. 2005. doi:10.1126/science.309.5731.78b. PMID 15994524. S2CID 33234834.
Heath Ecroyd; John A. Carver (2008). "Unraveling the mysteries of protein folding and misfolding". IUBMB Life (review). 60 (12): 769–774. doi:10.1002/iub.117. PMID 18767168. S2CID 10115925.
Yiwen Chen; Feng Ding; Huifen Nie; Adrian W. Serohijos; Shantanu Sharma; Kyle C. Wilcox; Shuangye Yin; Nikolay V. Dokholyan (2008). "Protein folding: Then and now". Archives of Biochemistry and Biophysics. 469 (1): 4–19. doi:10.1016/j.abb.2007.05.014. PMC 2173875. PMID 17585870.
Leila M Luheshi; Damian Crowther; Christopher Dobson (2008). "Protein misfolding and disease: from the test tube to the organism". Current Opinion in Chemical Biology. 12 (1): 25–31. doi:10.1016/j.cbpa.2008.02.011. PMID 18295611.
C. D. Snow; E. J. Sorin; Y. M. Rhee; V. S. Pande. (2005). "How well can simulation predict protein folding kinetics and thermodynamics?". Annual Review of Biophysics (review). 34: 43–69. doi:10.1146/annurev.biophys.34.040204.144447. PMID 15869383.
Vijay S. Pande; Ian Baker; Jarrod Chapman; Sidney P. Elmer; Siraj Khaliq; Stefan M. Larson; Young Min Rhee; Michael R. Shirts; Christopher D. Snow; Eric J. Sorin; Bojan Zagrovic (2002). "Atomistic protein folding simulations on the submillisecond timescale using worldwide distributed computing". Biopolymers. 68 (1): 91–109. doi:10.1002/bip.10219. PMID 12579582.
G. Bowman; V. Volez; V. S. Pande (2011). "Taming the complexity of protein folding". Current Opinion in Structural Biology. 21 (1): 4–11. doi:10.1016/j.sbi.2010.10.006. PMC 3042729. PMID 21081274.
Chodera, John D.; Swope, William C.; Pitera, Jed W.; Dill, Ken A. (January 1, 2006). "Long-Time Protein Folding Dynamics from Short-Time Molecular Dynamics Simulations". Multiscale Modeling & Simulation. 5 (4): 1214–1226. doi:10.1137/06065146X. S2CID 17825277.
Robert B Best (2012). "Atomistic molecular simulations of protein folding". Current Opinion in Structural Biology (review). 22 (1): 52–61. doi:10.1016/j.sbi.2011.12.001. PMID 22257762.
Gregory R. Bowman; Daniel L. Ensign; Vijay S. Pande (2010). "Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models". Journal of Chemical Theory and Computation. 6 (3): 787–794. Bibcode:2010JCTC....6..787B. doi:10.1021/ct900620b. PMC 3637129. PMID 23626502.
Kyle A. Beauchamp; Daniel L. Ensign; Rhiju Das; Vijay S. Pande (2011). "Quantitative comparison of villin headpiece subdomain simulations and triplet–triplet energy transfer experiments". Proceedings of the National Academy of Sciences. 108 (31): 12734–9. Bibcode:2011PNAS..10812734B. doi:10.1073/pnas.1010880108. PMC 3150881. PMID 21768345.
Timothy H. Click; Debabani Ganguly; Jianhan Chen (2010). "Intrinsically Disordered Proteins in a Physics-Based World". International Journal of Molecular Sciences. 11 (12): 919–27. doi:10.3390/ijms11125292. PMC 3100817. PMID 21614208.
Fred E. Cohen; Jeffery W. Kelly (2003). "Therapeutic approaches to protein misfolding diseases". Nature (review). 426 (6968): 905–9. Bibcode:2003Natur.426..905C. doi:10.1038/nature02265. PMID 14685252. S2CID 4421600.
Chun Song; Shen Lim; Joo Tong (2009). "Recent advances in computer-aided drug design". Briefings in Bioinformatics (review). 10 (5): 579–91. doi:10.1093/bib/bbp023. PMID 19433475.
Del Lucent; V. Vishal; Vijay S. Pande (2007). "Protein folding under confinement: A role for solvent". Proceedings of the National Academy of Sciences of the United States of America. 104 (25): 10430–10434. Bibcode:2007PNAS..10410430L. doi:10.1073/pnas.0608256104. PMC 1965530. PMID 17563390.
Vincent A. Voelz; Vijay R. Singh; William J. Wedemeyer; Lisa J. Lapidus; Vijay S. Pande (2010). "Unfolded-State Dynamics and Structure of Protein L Characterized by Simulation and Experiment". Journal of the American Chemical Society. 132 (13): 4702–4709. Bibcode:2010JAChS.132.4702V. doi:10.1021/ja908369h. PMC 2853762. PMID 20218718.
Caroline Hadley (2004). "Biologists think bigger". EMBO Reports. 5 (3): 236–238. doi:10.1038/sj.embor.7400108. PMC 1299019. PMID 14993921.
Pronk, Sander; Larsson, Per; Pouya, Iman; Bowman, Gregory R.; Haque, Imran S.; Beauchamp, Kyle; Hess, Berk; Pande, Vijay S.; Kasson, Peter M.; Lindahl, Erik (November 12, 2011). "Copernicus: A new paradigm for parallel adaptive molecular dynamics". Proceedings of 2011 International Conference for High Performance Computing, Networking, Storage and Analysis. ACM. pp. 1–10. doi:10.1145/2063384.2063465. ISBN 978-1-4503-0771-0.
G Brent Irvine; Omar M El-Agnaf; Ganesh M Shankar; Dominic M Walsh (2008). "Protein Aggregation in the Brain: The Molecular Basis for Alzheimer's and Parkinson's Diseases". Molecular Medicine (review). 14 (7–8): 451–464. doi:10.2119/2007-00100.Irvine. PMC 2274891. PMID 18368143.
Claudio Soto; Lisbell D. Estrada (2008). "Protein Misfolding and Neurodegeneration". Archives of Neurology (review). 65 (2): 184–189. doi:10.1001/archneurol.2007.56. PMID 18268186.
Robin Roychaudhuri; Mingfeng Yang; Minako M. Hoshi; David B. Teplow (2008). "Amyloid β-Protein Assembly and Alzheimer Disease". Journal of Biological Chemistry. 284 (8): 4749–53. doi:10.1074/jbc.R800036200. PMC 3837440. PMID 18845536.
Nicholas W. Kelley; V. Vishal; Grant A. Krafft; Vijay S. Pande. (2008). "Simulating oligomerization at experimental concentrations and long timescales: A Markov state model approach". Journal of Chemical Physics. 129 (21): 214707. Bibcode:2008JChPh.129u4707K. doi:10.1063/1.3010881. PMC 2674793. PMID 19063575.
P. Novick; J. Rajadas; C.W. Liu; N. W. Kelley; M. Inayathullah; V. S. Pande (2011). Buehler, Markus J. (ed.). "Rationally Designed Turn Promoting Mutation in the Amyloid-β Peptide Sequence Stabilizes Oligomers in Solution". PLOS ONE. 6 (7) e21776. Bibcode:2011PLoSO...621776R. doi:10.1371/journal.pone.0021776. PMC 3142112. PMID 21799748.
Aabgeena Naeem; Naveed Ahmad Fazili (2011). "Defective Protein Folding and Aggregation as the Basis of Neurodegenerative Diseases: The Darker Aspect of Proteins". Cell Biochemistry and Biophysics (review). 61 (2): 237–50. doi:10.1007/s12013-011-9200-x. PMID 21573992. S2CID 22622999.
Gregory R Bowman; Xuhui Huang; Vijay S Pande (2010). "Network models for molecular kinetics and their initial applications to human health". Cell Research (review). 20 (6): 622–630. doi:10.1038/cr.2010.57. PMC 4441225. PMID 20421891.
Paul A. Novick; Dahabada H. Lopes; Kim M. Branson; Alexandra Esteras-Chopo; Isabella A. Graef; Gal Bitan; Vijay S. Pande (2012). "Design of β-Amyloid Aggregation Inhibitors from a Predicted Structural Motif". Journal of Medicinal Chemistry. 55 (7): 3002–10. doi:10.1021/jm201332p. PMC 3766731. PMID 22420626.
Walker FO (2007). "Huntington's disease". Lancet. 369 (9557): 218–28 [220]. doi:10.1016/S0140-6736(07)60111-1. PMID 17240289. S2CID 46151626.
Nicholas W. Kelley; Xuhui Huang; Stephen Tam; Christoph Spiess; Judith Frydman; Vijay S. Pande (2009). "The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation". Journal of Molecular Biology. 388 (5): 919–27. doi:10.1016/j.jmb.2009.01.032. PMC 2677131. PMID 19361448.
Susan W Liebman; Stephen C Meredith (2010). "Protein folding: Sticky N17 speeds huntingtin pile-up". Nature Chemical Biology. 6 (1): 7–8. doi:10.1038/nchembio.279. PMID 20016493.
M Hollstein; D Sidransky; B Vogelstein; CC Harris (1991). "p53 mutations in human cancers". Science. 253 (5015): 49–53. Bibcode:1991Sci...253...49H. doi:10.1126/science.1905840. PMID 1905840. S2CID 38527914.
L. T. Chong; C. D. Snow; Y. M. Rhee; V. S. Pande. (2004). "Dimerization of the p53 Oligomerization Domain: Identification of a Folding Nucleus by Molecular Dynamics Simulations". Journal of Molecular Biology. 345 (4): 869–878. doi:10.1016/j.jmb.2004.10.083. PMID 15588832.
Lillian T. Chong; William C. Swope; Jed W. Pitera; Vijay S. Pande (2005). "Kinetic Computational Alanine Scanning: Application to p53 Oligomerization". Journal of Molecular Biology. 357 (3): 1039–1049. doi:10.1016/j.jmb.2005.12.083. PMID 16457841. S2CID 16156007.
Almeida MB, do Nascimento JL, Herculano AM, Crespo-López ME (2011). "Molecular chaperones: toward new therapeutic tools". Journal of Molecular Biology (review). 65 (4): 239–43. doi:10.1016/j.biopha.2011.04.025. PMID 21737228.
Aron M. Levin; Darren L. Bates; Aaron M. Ring; Carsten Krieg; Jack T. Lin; Leon Su; Ignacio Moraga; Miro E. Raeber; Gregory R. Bowman; Paul Novick; Vijay S. Pande; C. Garrison Fathman; Onur Boyman; K. Christopher Garcia (2012). "Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'". Nature. 484 (7395): 529–33. Bibcode:2012Natur.484..529L. doi:10.1038/nature10975. PMC 3338870. PMID 22446627.
Rauch F, Glorieux FH (2004). "Osteogenesis imperfecta". Lancet. 363 (9418): 1377–85. doi:10.1016/S0140-6736(04)16051-0. PMID 15110498. S2CID 24081895.
Gautieri A, Uzel S, Vesentini S, Redaelli A, Buehler MJ (2009). "Molecular and mesoscale disease mechanisms of Osteogenesis Imperfecta". Biophysical Journal. 97 (3): 857–865. Bibcode:2009BpJ....97..857G. doi:10.1016/j.bpj.2009.04.059. PMC 2718154. PMID 19651044.
Sanghyun Park; Randall J. Radmer; Teri E. Klein; Vijay S. Pande (2005). "A New Set of Molecular Mechanics Parameters for Hydroxyproline and Its Use in Molecular Dynamics Simulations of Collagen-Like Peptides". Journal of Computational Chemistry. 26 (15): 1612–1616. Bibcode:2005JCoCh..26.1612P. doi:10.1002/jcc.20301. PMID 16170799. S2CID 13051327.
Hana Robson Marsden; Itsuro Tomatsu; Alexander Kros (2011). "Model systems for membrane fusion". Chemical Society Reviews (review). 40 (3): 1572–1585. doi:10.1039/c0cs00115e. PMID 21152599.
Peter M. Kasson; Afra Zomorodian; Sanghyun Park; Nina Singhal; Leonidas J. Guibas; Vijay S. Pande (2007). "Persistent voids: a new structural metric for membrane fusion". Bioinformatics. 23 (14): 1753–1759. doi:10.1093/bioinformatics/btm250. PMID 17488753.
Peter M. Kasson; Daniel L. Ensign; Vijay S. Pande (2009). "Combining Molecular Dynamics with Bayesian Analysis To Predict and Evaluate Ligand-Binding Mutations in Influenza Hemagglutinin". Journal of the American Chemical Society. 131 (32): 11338–11340. Bibcode:2009JAChS.13111338K. doi:10.1021/ja904557w. PMC 2737089. PMID 19637916.
Peter M. Kasson; Vijay S. Pande (2009). "Combining mutual information with structural analysis to screen for functionally important residues in influenza hemagglutinin". Pacific Symposium on Biocomputing: 492–503. doi:10.1142/9789812836939_0047. ISBN 978-981-283-692-2. PMC 2811693. PMID 19209725.{{cite journal}}: CS1 maint: periodical has ISBN (link)
Guha Jayachandran; M. R. Shirts; S. Park; V. S. Pande (2006). "Parallelized-Over-Parts Computation of Absolute Binding Free Energy with Docking and Molecular Dynamics". Journal of Chemical Physics. 125 (8): 084901. Bibcode:2006JChPh.125h4901J. doi:10.1063/1.2221680. PMID 16965051.
Gregory R. Bowman; Phillip L. Geissler (July 2012). "Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites". PNAS. 109 (29): 11681–6. Bibcode:2012PNAS..10911681B. doi:10.1073/pnas.1209309109. PMC 3406870. PMID 22753506.
Paula M. Petrone; Christopher D. Snow; Del Lucent; Vijay S. Pande (2008). "Side-chain recognition and gating in the ribosome exit tunnel". Proceedings of the National Academy of Sciences. 105 (43): 16549–54. Bibcode:2008PNAS..10516549P. doi:10.1073/pnas.0801795105. PMC 2575457. PMID 18946046.
Raddick, M. Jordan; Bracey, Georgia; Gay, Pamela L.; Lintott, Chris J.; Murray, Phil; Schawinski, Kevin; Szalay, Alexander S.; Vandenberg, Jan (December 2010). "Galaxy Zoo: Exploring the Motivations of Citizen Science Volunteers". Astronomy Education Review. 9 (1): 010103. arXiv:0909.2925. Bibcode:2010AEdRv...9a0103R. doi:10.3847/AER2009036. S2CID 118372704.
Nov, Oded; Arazy, Ofer; Anderson, David (2011). "Dusting for science". Proceedings of the 2011 iConference. IConference '11. Seattle, Washington: ACM Press. pp. 68–74. doi:10.1145/1940761.1940771. ISBN 978-1-4503-0121-3. S2CID 12219985.
Curtis, Vickie (December 2015). "Motivation to Participate in an Online Citizen Science Game: A Study of Foldit" (PDF). Science Communication. 37 (6): 723–746. doi:10.1177/1075547015609322. ISSN 1075-5470. S2CID 1345402.
Curtis, Vickie (April 27, 2018). "Patterns of Participation and Motivation in Folding@home: The Contribution of Hardware Enthusiasts and Overclockers". Citizen Science: Theory and Practice. 3 (1): 5. doi:10.5334/cstp.109. ISSN 2057-4991.
Colwell, B. (March 2004). "The Zen of overclocking". Computer. 37 (3): 9–12. Bibcode:2004Compr..37c...9C. doi:10.1109/MC.2004.1273994. ISSN 0018-9162. S2CID 21582410.
Kloetzer, Laure; Da Costa, Julien; Schneider, Daniel K. (December 31, 2016). "Not so passive: engagement and learning in Volunteer Computing projects". Human Computation. 3 (1): 25–68. doi:10.15346/hc.v3i1.4. ISSN 2330-8001.
Darch, Peter; Carusi, Annamaria (September 13, 2010). "Retaining volunteers in volunteer computing projects". Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 368 (1926): 4177–4192. Bibcode:2010RSPTA.368.4177D. doi:10.1098/rsta.2010.0163. PMID 20679130. S2CID 1675353.
Krebs, Viola (January 31, 2010). "Motivations of cybervolunteers in an applied distributed computing environment: MalariaControl.net as an example". First Monday. 15 (2). doi:10.5210/fm.v15i2.2783.
Michael Gross (2012). "Folding research recruits unconventional help". Current Biology. 22 (2): R35–R38. Bibcode:2012CBio...22..R35G. doi:10.1016/j.cub.2012.01.008. PMID 22389910.
Adam Beberg; Daniel Ensign; Guha Jayachandran; Siraj Khaliq; Vijay Pande (2009). "Folding@home: Lessons from eight years of volunteer distributed computing" (PDF). 2009 IEEE International Symposium on Parallel & Distributed Processing. pp. 1–8. doi:10.1109/IPDPS.2009.5160922. ISBN 978-1-4244-3751-1. ISSN 1530-2075. S2CID 15677970.
Carsten Kutzner; David Van Der Spoel; Martin Fechner; Erik Lindahl; Udo W. Schmitt; Bert L. De Groot; Helmut Grubmüller (2007). "Speeding up parallel GROMACS on high-latency networks". Journal of Computational Chemistry. 28 (12): 2075–2084. Bibcode:2007JCoCh..28.2075K. doi:10.1002/jcc.20703. hdl:11858/00-001M-0000-0012-E29A-0. PMID 17405124. S2CID 519769.
Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl (2008). "GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation". Journal of Chemical Theory and Computation. 4 (3): 435–447. Bibcode:2008JCTC....4..435H. doi:10.1021/ct700301q. hdl:11858/00-001M-0000-0012-DDBF-0. PMID 26620784. S2CID 1142192.
M. S. Friedrichs; P. Eastman; V. Vaidyanathan; M. Houston; S. LeGrand; A. L. Beberg; D. L. Ensign; C. M. Bruns; V. S. Pande (2009). "Accelerating Molecular Dynamic Simulation on Graphics Processing Units". Journal of Computational Chemistry. 30 (6): 864–72. Bibcode:2009JCoCh..30..864F. doi:10.1002/jcc.21209. PMC 2724265. PMID 19191337.
Phineus R. L. Markwick; J. Andrew McCammon (2011). "Studying functional dynamics in bio-molecules using accelerated molecular dynamics". Physical Chemistry Chemical Physics. 13 (45): 20053–65. Bibcode:2011PCCP...1320053M. doi:10.1039/C1CP22100K. PMID 22015376.
M. R. Shirts; V. S. Pande. (2000). "Screen Savers of the World, Unite!". Science. 290 (5498): 1903–1904. doi:10.1126/science.290.5498.1903. PMID 17742054. S2CID 2854586.
John D. Owens; David Luebke; Naga Govindaraju; Mark Harris; Jens Krüger; Aaron Lefohn; Timothy J. Purcell (2007). "A Survey of General-Purpose Computation on Graphics Hardware". Computer Graphics Forum. 26 (1): 80–113. doi:10.1111/j.1467-8659.2007.01012.x. S2CID 62756490.
P. Eastman; V. S. Pande (2010). "OpenMM: A Hardware-Independent Framework for Molecular Simulations". Computing in Science and Engineering. 12 (4): 34–39. Bibcode:2010CSE....12d..34E. doi:10.1109/MCSE.2010.27. ISSN 1521-9615. PMC 4486654. PMID 26146490.
I. Haque; V. S. Pande (2010). "Hard Data on Soft Errors: A Large-Scale Assessment of Real-World Error Rates in GPGPU". 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing. pp. 691–696. arXiv:0910.0505. doi:10.1109/CCGRID.2010.84. ISBN 978-1-4244-6987-1. S2CID 10723933.
Edgar Luttmann; Daniel L. Ensign; Vishal Vaidyanathan; Mike Houston; Noam Rimon; Jeppe Øland; Guha Jayachandran; Mark Friedrichs; Vijay S. Pande (2008). "Accelerating Molecular Dynamic Simulation on the Cell processor and PlayStation 3". Journal of Computational Chemistry. 30 (2): 268–274. doi:10.1002/jcc.21054. PMID 18615421. S2CID 33047431.
Daniel L. Ensign; Peter M. Kasson; Vijay S. Pande (2007). "Heterogeneity Even at the Speed Limit of Folding: Large-scale Molecular Dynamics Study of a Fast-folding Variant of the Villin Headpiece". Journal of Molecular Biology. 374 (3): 806–816. doi:10.1016/j.jmb.2007.09.069. PMC 3689540. PMID 17950314.
Lensink MF, Méndez R, Wodak SJ (December 2007). "Docking and scoring protein complexes: CAPRI 3rd Edition". Proteins. 69 (4): 704–18. doi:10.1002/prot.21804. PMID 17918726. S2CID 25383642.
Gregory R. Bowman; Vijay S. Pande (2009). "Simulated tempering yields insight into the low-resolution Rosetta scoring function". Proteins: Structure, Function, and Bioinformatics. 74 (3): 777–88. doi:10.1002/prot.22210. PMID 18767152. S2CID 29895006.
G. R. Bowman; V. S. Pande (2009). Hofmann, Andreas (ed.). "The Roles of Entropy and Kinetics in Structure Prediction". PLOS ONE. 4 (6) e5840. Bibcode:2009PLoSO...4.5840B. doi:10.1371/journal.pone.0005840. PMC 2688754. PMID 19513117.
Thomas J. Lane; Gregory R. Bowman; Kyle A Beauchamp; Vincent Alvin Voelz; Vijay S. Pande (2011). "Markov State Model Reveals Folding and Functional Dynamics in Ultra-Long MD Trajectories". Journal of the American Chemical Society. 133 (45): 18413–9. Bibcode:2011JAChS.13318413L. doi:10.1021/ja207470h. PMC 3227799. PMID 21988563.
David E. Shaw; et al. (2009). "Millisecond-scale molecular dynamics simulations on Anton". Proceedings of the Conference on High Performance Computing Networking, Storage and Analysis - SC '09. pp. 1–11. doi:10.1145/1654059.1654099. ISBN 978-1-60558-744-8. S2CID 53234452.
David E. Shaw; et al. (2010). "Atomic-Level Characterization of the Structural Dynamics of Proteins". Science. 330 (6002): 341–346. Bibcode:2010Sci...330..341S. doi:10.1126/science.1187409. PMID 20947758. S2CID 3495023.
David E. Shaw; Martin M. Deneroff; Ron O. Dror; Jeffrey S. Kuskin; Richard H. Larson; John K. Salmon; Cliff Young; Brannon Batson; Kevin J. Bowers; Jack C. Chao; Michael P. Eastwood; Joseph Gagliardo; J. P. Grossman; C. Richard Ho; Douglas J. Ierardi; et al. (2008). "Anton, A Special-Purpose Machine for Molecular Dynamics Simulation". Communications of the ACM. 51 (7): 91–97. doi:10.1145/1364782.1364802.
Ron O. Dror; Robert M. Dirks; J.P. Grossman; Huafeng Xu; David E. Shaw (2012). "Biomolecular Simulation: A Computational Microscope for Molecular Biology". Annual Review of Biophysics. 41: 429–52. doi:10.1146/annurev-biophys-042910-155245. PMID 22577825.

engadget.com (Global: 613^th place; English: 442^nd place)

Moon, Mariella (July 28, 2020). "Folding@home ARM support lets Android devices crunch COVID-19 research data". Engadget. Yahoo. Retrieved July 27, 2025.

escholarship.org (Global: 1,477^th place; English: 863^rd place)

Chodera, John D.; Swope, William C.; Pitera, Jed W.; Dill, Ken A. (January 1, 2006). "Long-Time Protein Folding Dynamics from Short-Time Molecular Dynamics Simulations". Multiscale Modeling & Simulation. 5 (4): 1214–1226. doi:10.1137/06065146X. S2CID 17825277.

extremeoverclocking.com (Global: low place; English: low place)

forums.extremeoverclocking.com

"Official Extreme Overclocking Folding@home Team Forum". forums.extremeoverclocking.com. Extreme Overclocking. Archived from the original on September 21, 2012. Retrieved September 20, 2012.

foldingathome.org (Global: low place; English: low place)

foldingathome.org

foldingathome.org (September 27, 2016). "About Folding@home Partners". Archived from the original on April 23, 2020. Retrieved September 2, 2019.
Pande lab (August 2, 2012). "Folding@home Open Source FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on March 3, 2020. Retrieved July 8, 2013.
Folding@home n.d.e: "Folding@home (FAH or F@h) is a distributed computing project for simulating protein dynamics, including the process of protein folding and the movements of proteins implicated in a variety of diseases. It brings together citizen scientists who volunteer to run simulations of protein dynamics on their personal computers. Insights from this data are helping scientists to better understand biology, and providing new opportunities for developing therapeutics." Folding@home (n.d.e), "About", Folding@home, retrieved April 26, 2020
"Papers & Results". Folding@home.org. Retrieved December 9, 2021.
TJ Lane; Gregory Bowman; Robert McGibbon; Christian Schwantes; Vijay Pande; Bruce Borden (September 10, 2012). "Folding@home Simulation FAQ". Folding@home. foldingathome.org. Archived from the original on September 13, 2012. Retrieved July 8, 2013.
"Folding@home – Awards". Folding@home. foldingathome.org. August 2011. Archived from the original (FAQ) on July 12, 2012. Retrieved July 8, 2013.
Pande lab (May 30, 2012). "Folding@home Diseases Studied FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on August 25, 2012. Retrieved July 8, 2013.
Pande lab (2012). "Folding@Home Press FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on August 25, 2012. Retrieved July 8, 2013.
Pande lab (July 27, 2012). "Papers & Results from Folding@home". Folding@home. foldingathome.org. Archived from the original on July 17, 2012. Retrieved February 1, 2019.
Bowman, Greg (February 27, 2020). "Folding@home takes up the fight against COVID-19 / 2019-nCoV". Folding@home. Retrieved March 12, 2020.
"100 Petaflops nearly reached". foldingathome.org. May 11, 2016. Retrieved August 9, 2016.
Pande lab (August 20, 2012). "Folding@home Points FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on July 17, 2012. Retrieved July 8, 2013.
Pande lab (July 23, 2012). "Folding@home Passkey FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on September 22, 2012. Retrieved July 8, 2013.
Pande lab (August 18, 2011). "Folding@home Main FAQ" (FAQ). Folding@home. foldingathome.org. Archived from the original on November 20, 2012. Retrieved July 8, 2013.
Pande lab (June 11, 2012). "Folding@home SMP FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on September 22, 2012. Retrieved July 8, 2013.
Pande lab (August 19, 2012). "Folding@home Gromacs FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on July 17, 2012. Retrieved July 8, 2013.
Pande lab (August 7, 2012). "Folding@home Frequently Asked Questions (FAQ) Index". Folding@home. foldingathome.org. Archived from the original on October 25, 2012. Retrieved July 8, 2013.
Pande lab (August 19, 2012). "Folding@home Petaflop Initiative". Folding@home. foldingathome.org. Archived from the original (FAQ) on July 13, 2012. Retrieved July 8, 2013.
Pande lab (February 10, 2011). "Windows Uniprocessor Client Installation Guide". Folding@home. foldingathome.org. Archived from the original (Guide) on November 20, 2012. Retrieved July 8, 2013.
Pande lab (May 30, 2012). "Uninstalling Folding@home Guide". Folding@home. foldingathome.org. Archived from the original (Guide) on July 17, 2012. Retrieved July 8, 2013.
Pande lab. "Folding@home Distributed Computing Client". Folding@home. foldingathome.org. Archived from the original on June 26, 2012. Retrieved July 8, 2013.
Pande lab (May 30, 2012). "High Performance FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on August 19, 2012. Retrieved July 8, 2013.
Pande lab (March 18, 2011). "ATI FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on October 28, 2012. Retrieved July 8, 2013.
Pande lab (May 30, 2012). "PS3 FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on May 13, 2013. Retrieved July 8, 2013.
Vijay Pande (January 15, 2014). "Revised plans for BigAdv (BA) experiment". Retrieved October 6, 2014.
Pande lab (March 23, 2012). "Windows (FAH V7) Installation Guide". Folding@home. foldingathome.org. Archived from the original (Guide) on October 28, 2012. Retrieved July 8, 2013.
"v8.4 Client Guide – Folding@home". Retrieved September 4, 2025.
Pande, Vijay (February 24, 2014). "Adding a completely new way to fold, directly in the browser". foldingathome.org. Pande Lab, Stanford University. Retrieved February 13, 2015.
Pande, Vijay (July 7, 2015). "First full version of our Folding@Home client for Android Mobile phones". Folding@Home. foldingathome.org. Retrieved May 31, 2016.
"Android client overhaul". Folding@home. February 2, 2018. Retrieved July 22, 2019.

stats.foldingathome.org

"Client Statistics by OS". The Folding@home Consortium. Archived from the original on March 28, 2020. Retrieved April 12, 2020.
"Folding@home stats report". March 20, 2020. Archived from the original on March 20, 2020. Retrieved March 20, 2020.
"Folding@home stats report". Retrieved October 31, 2025.

download.foldingathome.org

"Index of /releases/public/fah-client/". Retrieved August 7, 2026.

nacl.foldingathome.org

"NaCL Web Client Shutdown Notice". Folding@Home. Archived from the original on April 12, 2019. Retrieved August 29, 2019.

foldingforum.org (Global: low place; English: low place)

Pande 2008: "Wall clock time is in the end the only thing that matters and that's why we benchmark on wall clock (and why in our papers, we emphasize wall clock)." Pande, Vijay S. (November 10, 2008), "Re: ATI and NVIDIA stats vs. PPD numbers", Folding Forum, the fifth post from below, archived from the original on March 31, 2012, retrieved April 26, 2020
Christian "schwancr" Schwantes (Pande lab member) (August 15, 2011). "Projects 7808 and 7809 to full fah". Folding@home. phpBB Group. Archived from the original on January 31, 2013. Retrieved October 16, 2011.
Vijay Pande (October 25, 2011). "Re: Suggested Changes to F@h Website". Folding@home. phpBB Group. Archived from the original on March 31, 2012. Retrieved October 25, 2011.
yslin (Pande lab member) (July 22, 2011). "New project p6871 [Classic]". Folding@home. phpBB Group. Archived from the original on October 30, 2013. Retrieved March 17, 2012.(registration required)
Diwakar Shukla (Pande lab member) (February 10, 2012). "Project 8021 released to beta". Folding@home. phpBB Group. Archived from the original on August 9, 2014. Retrieved March 17, 2012.(registration required)
TJ Lane (Pande lab member) (June 8, 2011). "Project 7600 in Beta". Folding@home. phpBB Group. Archived from the original on August 10, 2014. Retrieved September 27, 2011.(registration required)
Gregory Bowman (Pande lab Member). "Project 10125". Folding@home. phpBB Group. Retrieved December 2, 2011.(registration required)
Jesse Victors (November 10, 2011). "Six Native PetaFLOPS". Folding@home. phpBB Group. Archived from the original on July 31, 2013. Retrieved November 11, 2011.
Peter Kasson (Pande lab member) (January 24, 2010). "upcoming release of SMP2 cores". Folding@home. phpBB Group. Archived from the original on November 30, 2012. Retrieved September 30, 2011.
Bruce Borden (August 7, 2011). "Re: Gromacs Cannot Continue Further". Folding@home. phpBB Group. Archived from the original on March 31, 2012. Retrieved August 7, 2011.
PantherX (October 1, 2011). "Re: Project 6803: (Run 4, Clone 66, Gen 255)". Folding@home. phpBB Group. Archived from the original on March 31, 2012. Retrieved October 9, 2011.
PantherX (October 31, 2010). "Troubleshooting Bad WUs". Folding@home. phpBB Group. Archived from the original on October 7, 2012. Retrieved August 7, 2011.
PantherX (September 2, 2010). "Re: Can Folding@home damage any part of my PC?". Folding@home. phpBB Group. Archived from the original on November 30, 2012. Retrieved February 25, 2012.
Vijay Pande (June 28, 2008). "Folding@home's End User License Agreement (EULA)". Folding@home. Archived from the original on October 9, 2012. Retrieved May 15, 2012.
Joseph Coffland (CEO of Cauldron Development LLC & lead developer at Folding@home) (October 13, 2011). "Re: FAHClient V7.1.38 released (4th Open-Beta)". Folding@home. phpBB Group. Archived from the original on March 31, 2012. Retrieved October 15, 2011.
"NVIDIA GPU3 Linux/Wine Headless Install Guide". Folding@home. phpBB Group. November 8, 2008. Archived from the original on October 9, 2012. Retrieved September 5, 2011.
Bruce Borden (June 25, 2013). "GPU FahCore_17 is now available on Windows & native Linux". Folding@home. phpBB Group. Retrieved September 30, 2014.
Peter Kasson (Pande lab member) (July 15, 2009). "new release: extra-large work units". Folding@home. phpBB Group. Archived from the original on November 11, 2012. Retrieved October 9, 2011.
TJ Lane (Pande lab member) (June 6, 2011). "Project 7610 & 7611 in Beta". Folding@home. phpBB Group. Archived from the original on August 9, 2014. Retrieved February 25, 2012.(registration required)

github.com (Global: 380^th place; English: 337^th place)

"GitHub - msmbuilder/msmbuilder: :building_construction: Statistical models for biomolecular dynamics :building_construction: · GitHub". MSMBuilder. github.com. 2019. Archived from the original on March 12, 2023. Retrieved July 7, 2026.
probably using tools such as ERESI Archived July 7, 2018, at the Wayback Machine
Folding@home developers. "GitHub - FoldingAtHome/fah-control: Folding@home Client Advanced Control GUI · GitHub". foldingathome.org. Archived from the original on July 7, 2026. Retrieved July 7, 2026.

gizmodo.com (Global: 763^rd place; English: 486^th place)

Elaine Chow (September 18, 2008). "PS3 News Service, Life With Playstation, Now Up For Download". Gizmodo.com. Gizmodo. Archived from the original on June 20, 2012. Retrieved September 20, 2012.

hdl.handle.net (Global: 66^th place; English: 34^th place)

Carsten Kutzner; David Van Der Spoel; Martin Fechner; Erik Lindahl; Udo W. Schmitt; Bert L. De Groot; Helmut Grubmüller (2007). "Speeding up parallel GROMACS on high-latency networks". Journal of Computational Chemistry. 28 (12): 2075–2084. Bibcode:2007JCoCh..28.2075K. doi:10.1002/jcc.20703. hdl:11858/00-001M-0000-0012-E29A-0. PMID 17405124. S2CID 519769.
Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl (2008). "GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation". Journal of Chemical Theory and Computation. 4 (3): 435–447. Bibcode:2008JCTC....4..435H. doi:10.1021/ct700301q. hdl:11858/00-001M-0000-0012-DDBF-0. PMID 26620784. S2CID 1142192.

hicomb.org (Global: low place; English: low place)

Adam Beberg; Daniel Ensign; Guha Jayachandran; Siraj Khaliq; Vijay Pande (2009). "Folding@home: Lessons from eight years of volunteer distributed computing" (PDF). 2009 IEEE International Symposium on Parallel & Distributed Processing. pp. 1–8. doi:10.1109/IPDPS.2009.5160922. ISBN 978-1-4244-3751-1. ISSN 1530-2075. S2CID 15677970.

hpcwire.com (Global: low place; English: low place)

"Folding@home Turns Its Massive Crowdsourced Computer Network Against COVID-19". March 16, 2020.

leviathansecurity.com (Global: low place; English: low place)

"The Case of the Modified Binaries". Leviathan Security.

longecity.org (Global: low place; English: low place)

"3 PetaFLOP barrier". longecity.org. Longecity. August 19, 2008. Archived from the original on August 30, 2012. Retrieved September 20, 2012.
"Crossing the 5 petaFLOPS barrier". longecity.org. Longecity. February 18, 2009. Archived from the original on August 30, 2012. Retrieved September 20, 2012.

massey.ac.nz (Global: low place; English: 7,712^th place)

cs-alb-pc3.massey.ac.nz

Dragan Zakic (May 2009). "Community Grid Computing — Studies in Parallel and Distributed Systems" (PDF). Massey University College of Sciences. Massey University. Archived from the original (PDF) on March 23, 2012. Retrieved September 20, 2012.

maximumpc.com (Global: low place; English: low place)

mah3; Vijay Pande (September 24, 2004). "F@H project publishes results of cancer related research". MaximumPC.com. Future US, Inc. Archived from the original on October 29, 2013. Retrieved September 20, 2012. To our knowledge, this is the first peer-reviewed results from a distributed computing project related to cancer.
Norman Chan (April 6, 2009). "Help Maximum PC's Folding Team Win the Next Chimp Challenge!". Maximumpc.com. Future US, Inc. Archived from the original on July 7, 2012. Retrieved September 20, 2012.

mb.com.ph (Global: 1,172^nd place; English: 571^st place)

Jerry Liao (March 23, 2007). "The Home Cure: PlayStation 3 to Help Study Causes of Cancer". mb.com. Manila Bulletin Publishing Corporation. Archived from the original on July 1, 2012. Retrieved September 20, 2012.

medicalxpress.com (Global: low place; English: low place)

"Scientists boost potency, reduce side effects of IL-2 protein used to treat cancer". MedicalXpress.com. Medical Xpress. March 18, 2012. Archived from the original on October 3, 2012. Retrieved September 20, 2012.

n4g.com (Global: low place; English: low place)

"Folding@Home reach 2 Petaflops". n4g.com. HAVAmedia. May 8, 2008. Archived from the original on June 10, 2012. Retrieved September 20, 2012.

ncu.edu.tw (Global: low place; English: low place)

sansan.phy.ncu.edu.tw

Christopher D. Snow; Houbi Nguyen; Vijay S. Pande; Martin Gruebele (2002). "Absolute comparison of simulated and experimental protein-folding dynamics" (PDF). Nature. 420 (6911): 102–106. Bibcode:2002Natur.420..102S. doi:10.1038/nature01160. PMID 12422224. S2CID 1061159. Archived from the original (PDF) on March 24, 2012.

news12.com (Global: low place; English: 5,333^rd place)

longisland.news12.com

News 12 Staff 2020: "Since the start of the COVID-19 pandemic, Folding@home has seen a significant surge in downloads, a clear indication that people around the world are concerned about doing their part to help researchers find a remedy to this virus," said Dr. Sina Rabbany, dean of the DeMatteis School." News 12 Staff (May 13, 2020), Hofstra University lends resource lab for worldwide COVID-19 research, retrieved May 24, 2020

nih.gov (Global: 5^th place; English: 5^th place)

pubmed.ncbi.nlm.nih.gov

V. S. Pande; K. Beauchamp; G. R. Bowman (2010). "Everything you wanted to know about Markov State Models but were afraid to ask". Methods. 52 (1): 99–105. doi:10.1016/j.ymeth.2010.06.002. PMC 2933958. PMID 20570730.
Vincent A. Voelz; Gregory R. Bowman; Kyle Beauchamp; Vijay S. Pande (2010). "Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1–39)". Journal of the American Chemical Society. 132 (5): 1526–1528. doi:10.1021/ja9090353. PMC 2835335. PMID 20070076.
Gregory R. Bowman; Vijay S. Pande (2010). "Protein folded states are kinetic hubs". Proceedings of the National Academy of Sciences. 107 (24): 10890–5. Bibcode:2010PNAS..10710890B. doi:10.1073/pnas.1003962107. PMC 2890711. PMID 20534497.
Christopher D. Snow; Houbi Nguyen; Vijay S. Pande; Martin Gruebele (2002). "Absolute comparison of simulated and experimental protein-folding dynamics" (PDF). Nature. 420 (6911): 102–106. Bibcode:2002Natur.420..102S. doi:10.1038/nature01160. PMID 12422224. S2CID 1061159. Archived from the original (PDF) on March 24, 2012.
Fabrizio Marinelli; Fabio Pietrucci; Alessandro Laio; Stefano Piana (2009). Pande, Vijay S. (ed.). "A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations". PLOS Computational Biology. 5 (8) e1000452. Bibcode:2009PLSCB...5E0452M. doi:10.1371/journal.pcbi.1000452. PMC 2711228. PMID 19662155.
"So Much More to Know". Science. 309 (5731): 78–102. 2005. doi:10.1126/science.309.5731.78b. PMID 15994524. S2CID 33234834.
Heath Ecroyd; John A. Carver (2008). "Unraveling the mysteries of protein folding and misfolding". IUBMB Life (review). 60 (12): 769–774. doi:10.1002/iub.117. PMID 18767168. S2CID 10115925.
Yiwen Chen; Feng Ding; Huifen Nie; Adrian W. Serohijos; Shantanu Sharma; Kyle C. Wilcox; Shuangye Yin; Nikolay V. Dokholyan (2008). "Protein folding: Then and now". Archives of Biochemistry and Biophysics. 469 (1): 4–19. doi:10.1016/j.abb.2007.05.014. PMC 2173875. PMID 17585870.
Leila M Luheshi; Damian Crowther; Christopher Dobson (2008). "Protein misfolding and disease: from the test tube to the organism". Current Opinion in Chemical Biology. 12 (1): 25–31. doi:10.1016/j.cbpa.2008.02.011. PMID 18295611.
C. D. Snow; E. J. Sorin; Y. M. Rhee; V. S. Pande. (2005). "How well can simulation predict protein folding kinetics and thermodynamics?". Annual Review of Biophysics (review). 34: 43–69. doi:10.1146/annurev.biophys.34.040204.144447. PMID 15869383.
Vijay S. Pande; Ian Baker; Jarrod Chapman; Sidney P. Elmer; Siraj Khaliq; Stefan M. Larson; Young Min Rhee; Michael R. Shirts; Christopher D. Snow; Eric J. Sorin; Bojan Zagrovic (2002). "Atomistic protein folding simulations on the submillisecond timescale using worldwide distributed computing". Biopolymers. 68 (1): 91–109. doi:10.1002/bip.10219. PMID 12579582.
G. Bowman; V. Volez; V. S. Pande (2011). "Taming the complexity of protein folding". Current Opinion in Structural Biology. 21 (1): 4–11. doi:10.1016/j.sbi.2010.10.006. PMC 3042729. PMID 21081274.
Robert B Best (2012). "Atomistic molecular simulations of protein folding". Current Opinion in Structural Biology (review). 22 (1): 52–61. doi:10.1016/j.sbi.2011.12.001. PMID 22257762.
Gregory R. Bowman; Daniel L. Ensign; Vijay S. Pande (2010). "Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models". Journal of Chemical Theory and Computation. 6 (3): 787–794. Bibcode:2010JCTC....6..787B. doi:10.1021/ct900620b. PMC 3637129. PMID 23626502.
Kyle A. Beauchamp; Daniel L. Ensign; Rhiju Das; Vijay S. Pande (2011). "Quantitative comparison of villin headpiece subdomain simulations and triplet–triplet energy transfer experiments". Proceedings of the National Academy of Sciences. 108 (31): 12734–9. Bibcode:2011PNAS..10812734B. doi:10.1073/pnas.1010880108. PMC 3150881. PMID 21768345.
Timothy H. Click; Debabani Ganguly; Jianhan Chen (2010). "Intrinsically Disordered Proteins in a Physics-Based World". International Journal of Molecular Sciences. 11 (12): 919–27. doi:10.3390/ijms11125292. PMC 3100817. PMID 21614208.
Fred E. Cohen; Jeffery W. Kelly (2003). "Therapeutic approaches to protein misfolding diseases". Nature (review). 426 (6968): 905–9. Bibcode:2003Natur.426..905C. doi:10.1038/nature02265. PMID 14685252. S2CID 4421600.
Chun Song; Shen Lim; Joo Tong (2009). "Recent advances in computer-aided drug design". Briefings in Bioinformatics (review). 10 (5): 579–91. doi:10.1093/bib/bbp023. PMID 19433475.
Del Lucent; V. Vishal; Vijay S. Pande (2007). "Protein folding under confinement: A role for solvent". Proceedings of the National Academy of Sciences of the United States of America. 104 (25): 10430–10434. Bibcode:2007PNAS..10410430L. doi:10.1073/pnas.0608256104. PMC 1965530. PMID 17563390.
Vincent A. Voelz; Vijay R. Singh; William J. Wedemeyer; Lisa J. Lapidus; Vijay S. Pande (2010). "Unfolded-State Dynamics and Structure of Protein L Characterized by Simulation and Experiment". Journal of the American Chemical Society. 132 (13): 4702–4709. Bibcode:2010JAChS.132.4702V. doi:10.1021/ja908369h. PMC 2853762. PMID 20218718.
Caroline Hadley (2004). "Biologists think bigger". EMBO Reports. 5 (3): 236–238. doi:10.1038/sj.embor.7400108. PMC 1299019. PMID 14993921.
G Brent Irvine; Omar M El-Agnaf; Ganesh M Shankar; Dominic M Walsh (2008). "Protein Aggregation in the Brain: The Molecular Basis for Alzheimer's and Parkinson's Diseases". Molecular Medicine (review). 14 (7–8): 451–464. doi:10.2119/2007-00100.Irvine. PMC 2274891. PMID 18368143.
Claudio Soto; Lisbell D. Estrada (2008). "Protein Misfolding and Neurodegeneration". Archives of Neurology (review). 65 (2): 184–189. doi:10.1001/archneurol.2007.56. PMID 18268186.
Robin Roychaudhuri; Mingfeng Yang; Minako M. Hoshi; David B. Teplow (2008). "Amyloid β-Protein Assembly and Alzheimer Disease". Journal of Biological Chemistry. 284 (8): 4749–53. doi:10.1074/jbc.R800036200. PMC 3837440. PMID 18845536.
Nicholas W. Kelley; V. Vishal; Grant A. Krafft; Vijay S. Pande. (2008). "Simulating oligomerization at experimental concentrations and long timescales: A Markov state model approach". Journal of Chemical Physics. 129 (21): 214707. Bibcode:2008JChPh.129u4707K. doi:10.1063/1.3010881. PMC 2674793. PMID 19063575.
P. Novick; J. Rajadas; C.W. Liu; N. W. Kelley; M. Inayathullah; V. S. Pande (2011). Buehler, Markus J. (ed.). "Rationally Designed Turn Promoting Mutation in the Amyloid-β Peptide Sequence Stabilizes Oligomers in Solution". PLOS ONE. 6 (7) e21776. Bibcode:2011PLoSO...621776R. doi:10.1371/journal.pone.0021776. PMC 3142112. PMID 21799748.
Aabgeena Naeem; Naveed Ahmad Fazili (2011). "Defective Protein Folding and Aggregation as the Basis of Neurodegenerative Diseases: The Darker Aspect of Proteins". Cell Biochemistry and Biophysics (review). 61 (2): 237–50. doi:10.1007/s12013-011-9200-x. PMID 21573992. S2CID 22622999.
Gregory R Bowman; Xuhui Huang; Vijay S Pande (2010). "Network models for molecular kinetics and their initial applications to human health". Cell Research (review). 20 (6): 622–630. doi:10.1038/cr.2010.57. PMC 4441225. PMID 20421891.
Paul A. Novick; Dahabada H. Lopes; Kim M. Branson; Alexandra Esteras-Chopo; Isabella A. Graef; Gal Bitan; Vijay S. Pande (2012). "Design of β-Amyloid Aggregation Inhibitors from a Predicted Structural Motif". Journal of Medicinal Chemistry. 55 (7): 3002–10. doi:10.1021/jm201332p. PMC 3766731. PMID 22420626.
Walker FO (2007). "Huntington's disease". Lancet. 369 (9557): 218–28 [220]. doi:10.1016/S0140-6736(07)60111-1. PMID 17240289. S2CID 46151626.
Nicholas W. Kelley; Xuhui Huang; Stephen Tam; Christoph Spiess; Judith Frydman; Vijay S. Pande (2009). "The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation". Journal of Molecular Biology. 388 (5): 919–27. doi:10.1016/j.jmb.2009.01.032. PMC 2677131. PMID 19361448.
Susan W Liebman; Stephen C Meredith (2010). "Protein folding: Sticky N17 speeds huntingtin pile-up". Nature Chemical Biology. 6 (1): 7–8. doi:10.1038/nchembio.279. PMID 20016493.
M Hollstein; D Sidransky; B Vogelstein; CC Harris (1991). "p53 mutations in human cancers". Science. 253 (5015): 49–53. Bibcode:1991Sci...253...49H. doi:10.1126/science.1905840. PMID 1905840. S2CID 38527914.
L. T. Chong; C. D. Snow; Y. M. Rhee; V. S. Pande. (2004). "Dimerization of the p53 Oligomerization Domain: Identification of a Folding Nucleus by Molecular Dynamics Simulations". Journal of Molecular Biology. 345 (4): 869–878. doi:10.1016/j.jmb.2004.10.083. PMID 15588832.
Lillian T. Chong; William C. Swope; Jed W. Pitera; Vijay S. Pande (2005). "Kinetic Computational Alanine Scanning: Application to p53 Oligomerization". Journal of Molecular Biology. 357 (3): 1039–1049. doi:10.1016/j.jmb.2005.12.083. PMID 16457841. S2CID 16156007.
Almeida MB, do Nascimento JL, Herculano AM, Crespo-López ME (2011). "Molecular chaperones: toward new therapeutic tools". Journal of Molecular Biology (review). 65 (4): 239–43. doi:10.1016/j.biopha.2011.04.025. PMID 21737228.
Aron M. Levin; Darren L. Bates; Aaron M. Ring; Carsten Krieg; Jack T. Lin; Leon Su; Ignacio Moraga; Miro E. Raeber; Gregory R. Bowman; Paul Novick; Vijay S. Pande; C. Garrison Fathman; Onur Boyman; K. Christopher Garcia (2012). "Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'". Nature. 484 (7395): 529–33. Bibcode:2012Natur.484..529L. doi:10.1038/nature10975. PMC 3338870. PMID 22446627.
Rauch F, Glorieux FH (2004). "Osteogenesis imperfecta". Lancet. 363 (9418): 1377–85. doi:10.1016/S0140-6736(04)16051-0. PMID 15110498. S2CID 24081895.
Gautieri A, Uzel S, Vesentini S, Redaelli A, Buehler MJ (2009). "Molecular and mesoscale disease mechanisms of Osteogenesis Imperfecta". Biophysical Journal. 97 (3): 857–865. Bibcode:2009BpJ....97..857G. doi:10.1016/j.bpj.2009.04.059. PMC 2718154. PMID 19651044.
Sanghyun Park; Randall J. Radmer; Teri E. Klein; Vijay S. Pande (2005). "A New Set of Molecular Mechanics Parameters for Hydroxyproline and Its Use in Molecular Dynamics Simulations of Collagen-Like Peptides". Journal of Computational Chemistry. 26 (15): 1612–1616. Bibcode:2005JCoCh..26.1612P. doi:10.1002/jcc.20301. PMID 16170799. S2CID 13051327.
Hana Robson Marsden; Itsuro Tomatsu; Alexander Kros (2011). "Model systems for membrane fusion". Chemical Society Reviews (review). 40 (3): 1572–1585. doi:10.1039/c0cs00115e. PMID 21152599.
Peter M. Kasson; Afra Zomorodian; Sanghyun Park; Nina Singhal; Leonidas J. Guibas; Vijay S. Pande (2007). "Persistent voids: a new structural metric for membrane fusion". Bioinformatics. 23 (14): 1753–1759. doi:10.1093/bioinformatics/btm250. PMID 17488753.
Peter M. Kasson; Daniel L. Ensign; Vijay S. Pande (2009). "Combining Molecular Dynamics with Bayesian Analysis To Predict and Evaluate Ligand-Binding Mutations in Influenza Hemagglutinin". Journal of the American Chemical Society. 131 (32): 11338–11340. Bibcode:2009JAChS.13111338K. doi:10.1021/ja904557w. PMC 2737089. PMID 19637916.
Peter M. Kasson; Vijay S. Pande (2009). "Combining mutual information with structural analysis to screen for functionally important residues in influenza hemagglutinin". Pacific Symposium on Biocomputing: 492–503. doi:10.1142/9789812836939_0047. ISBN 978-981-283-692-2. PMC 2811693. PMID 19209725.{{cite journal}}: CS1 maint: periodical has ISBN (link)
Guha Jayachandran; M. R. Shirts; S. Park; V. S. Pande (2006). "Parallelized-Over-Parts Computation of Absolute Binding Free Energy with Docking and Molecular Dynamics". Journal of Chemical Physics. 125 (8): 084901. Bibcode:2006JChPh.125h4901J. doi:10.1063/1.2221680. PMID 16965051.
Gregory R. Bowman; Phillip L. Geissler (July 2012). "Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites". PNAS. 109 (29): 11681–6. Bibcode:2012PNAS..10911681B. doi:10.1073/pnas.1209309109. PMC 3406870. PMID 22753506.
Paula M. Petrone; Christopher D. Snow; Del Lucent; Vijay S. Pande (2008). "Side-chain recognition and gating in the ribosome exit tunnel". Proceedings of the National Academy of Sciences. 105 (43): 16549–54. Bibcode:2008PNAS..10516549P. doi:10.1073/pnas.0801795105. PMC 2575457. PMID 18946046.
Darch, Peter; Carusi, Annamaria (September 13, 2010). "Retaining volunteers in volunteer computing projects". Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 368 (1926): 4177–4192. Bibcode:2010RSPTA.368.4177D. doi:10.1098/rsta.2010.0163. PMID 20679130. S2CID 1675353.
Michael Gross (2012). "Folding research recruits unconventional help". Current Biology. 22 (2): R35–R38. Bibcode:2012CBio...22..R35G. doi:10.1016/j.cub.2012.01.008. PMID 22389910.
Carsten Kutzner; David Van Der Spoel; Martin Fechner; Erik Lindahl; Udo W. Schmitt; Bert L. De Groot; Helmut Grubmüller (2007). "Speeding up parallel GROMACS on high-latency networks". Journal of Computational Chemistry. 28 (12): 2075–2084. Bibcode:2007JCoCh..28.2075K. doi:10.1002/jcc.20703. hdl:11858/00-001M-0000-0012-E29A-0. PMID 17405124. S2CID 519769.
Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl (2008). "GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation". Journal of Chemical Theory and Computation. 4 (3): 435–447. Bibcode:2008JCTC....4..435H. doi:10.1021/ct700301q. hdl:11858/00-001M-0000-0012-DDBF-0. PMID 26620784. S2CID 1142192.
M. S. Friedrichs; P. Eastman; V. Vaidyanathan; M. Houston; S. LeGrand; A. L. Beberg; D. L. Ensign; C. M. Bruns; V. S. Pande (2009). "Accelerating Molecular Dynamic Simulation on Graphics Processing Units". Journal of Computational Chemistry. 30 (6): 864–72. Bibcode:2009JCoCh..30..864F. doi:10.1002/jcc.21209. PMC 2724265. PMID 19191337.
Phineus R. L. Markwick; J. Andrew McCammon (2011). "Studying functional dynamics in bio-molecules using accelerated molecular dynamics". Physical Chemistry Chemical Physics. 13 (45): 20053–65. Bibcode:2011PCCP...1320053M. doi:10.1039/C1CP22100K. PMID 22015376.
M. R. Shirts; V. S. Pande. (2000). "Screen Savers of the World, Unite!". Science. 290 (5498): 1903–1904. doi:10.1126/science.290.5498.1903. PMID 17742054. S2CID 2854586.
P. Eastman; V. S. Pande (2010). "OpenMM: A Hardware-Independent Framework for Molecular Simulations". Computing in Science and Engineering. 12 (4): 34–39. Bibcode:2010CSE....12d..34E. doi:10.1109/MCSE.2010.27. ISSN 1521-9615. PMC 4486654. PMID 26146490.
Edgar Luttmann; Daniel L. Ensign; Vishal Vaidyanathan; Mike Houston; Noam Rimon; Jeppe Øland; Guha Jayachandran; Mark Friedrichs; Vijay S. Pande (2008). "Accelerating Molecular Dynamic Simulation on the Cell processor and PlayStation 3". Journal of Computational Chemistry. 30 (2): 268–274. doi:10.1002/jcc.21054. PMID 18615421. S2CID 33047431.
Daniel L. Ensign; Peter M. Kasson; Vijay S. Pande (2007). "Heterogeneity Even at the Speed Limit of Folding: Large-scale Molecular Dynamics Study of a Fast-folding Variant of the Villin Headpiece". Journal of Molecular Biology. 374 (3): 806–816. doi:10.1016/j.jmb.2007.09.069. PMC 3689540. PMID 17950314.
Lensink MF, Méndez R, Wodak SJ (December 2007). "Docking and scoring protein complexes: CAPRI 3rd Edition". Proteins. 69 (4): 704–18. doi:10.1002/prot.21804. PMID 17918726. S2CID 25383642.
Gregory R. Bowman; Vijay S. Pande (2009). "Simulated tempering yields insight into the low-resolution Rosetta scoring function". Proteins: Structure, Function, and Bioinformatics. 74 (3): 777–88. doi:10.1002/prot.22210. PMID 18767152. S2CID 29895006.
G. R. Bowman; V. S. Pande (2009). Hofmann, Andreas (ed.). "The Roles of Entropy and Kinetics in Structure Prediction". PLOS ONE. 4 (6) e5840. Bibcode:2009PLoSO...4.5840B. doi:10.1371/journal.pone.0005840. PMC 2688754. PMID 19513117.
Thomas J. Lane; Gregory R. Bowman; Kyle A Beauchamp; Vincent Alvin Voelz; Vijay S. Pande (2011). "Markov State Model Reveals Folding and Functional Dynamics in Ultra-Long MD Trajectories". Journal of the American Chemical Society. 133 (45): 18413–9. Bibcode:2011JAChS.13318413L. doi:10.1021/ja207470h. PMC 3227799. PMID 21988563.
David E. Shaw; et al. (2010). "Atomic-Level Characterization of the Structural Dynamics of Proteins". Science. 330 (6002): 341–346. Bibcode:2010Sci...330..341S. doi:10.1126/science.1187409. PMID 20947758. S2CID 3495023.
Ron O. Dror; Robert M. Dirks; J.P. Grossman; Huafeng Xu; David E. Shaw (2012). "Biomolecular Simulation: A Computational Microscope for Molecular Biology". Annual Review of Biophysics. 41: 429–52. doi:10.1146/annurev-biophys-042910-155245. PMID 22577825.

ncbi.nlm.nih.gov

V. S. Pande; K. Beauchamp; G. R. Bowman (2010). "Everything you wanted to know about Markov State Models but were afraid to ask". Methods. 52 (1): 99–105. doi:10.1016/j.ymeth.2010.06.002. PMC 2933958. PMID 20570730.
Vincent A. Voelz; Gregory R. Bowman; Kyle Beauchamp; Vijay S. Pande (2010). "Molecular simulation of ab initio protein folding for a millisecond folder NTL9(1–39)". Journal of the American Chemical Society. 132 (5): 1526–1528. doi:10.1021/ja9090353. PMC 2835335. PMID 20070076.
Gregory R. Bowman; Vijay S. Pande (2010). "Protein folded states are kinetic hubs". Proceedings of the National Academy of Sciences. 107 (24): 10890–5. Bibcode:2010PNAS..10710890B. doi:10.1073/pnas.1003962107. PMC 2890711. PMID 20534497.
Fabrizio Marinelli; Fabio Pietrucci; Alessandro Laio; Stefano Piana (2009). Pande, Vijay S. (ed.). "A Kinetic Model of Trp-Cage Folding from Multiple Biased Molecular Dynamics Simulations". PLOS Computational Biology. 5 (8) e1000452. Bibcode:2009PLSCB...5E0452M. doi:10.1371/journal.pcbi.1000452. PMC 2711228. PMID 19662155.
Yiwen Chen; Feng Ding; Huifen Nie; Adrian W. Serohijos; Shantanu Sharma; Kyle C. Wilcox; Shuangye Yin; Nikolay V. Dokholyan (2008). "Protein folding: Then and now". Archives of Biochemistry and Biophysics. 469 (1): 4–19. doi:10.1016/j.abb.2007.05.014. PMC 2173875. PMID 17585870.
G. Bowman; V. Volez; V. S. Pande (2011). "Taming the complexity of protein folding". Current Opinion in Structural Biology. 21 (1): 4–11. doi:10.1016/j.sbi.2010.10.006. PMC 3042729. PMID 21081274.
Gregory R. Bowman; Daniel L. Ensign; Vijay S. Pande (2010). "Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models". Journal of Chemical Theory and Computation. 6 (3): 787–794. Bibcode:2010JCTC....6..787B. doi:10.1021/ct900620b. PMC 3637129. PMID 23626502.
Kyle A. Beauchamp; Daniel L. Ensign; Rhiju Das; Vijay S. Pande (2011). "Quantitative comparison of villin headpiece subdomain simulations and triplet–triplet energy transfer experiments". Proceedings of the National Academy of Sciences. 108 (31): 12734–9. Bibcode:2011PNAS..10812734B. doi:10.1073/pnas.1010880108. PMC 3150881. PMID 21768345.
Timothy H. Click; Debabani Ganguly; Jianhan Chen (2010). "Intrinsically Disordered Proteins in a Physics-Based World". International Journal of Molecular Sciences. 11 (12): 919–27. doi:10.3390/ijms11125292. PMC 3100817. PMID 21614208.
Del Lucent; V. Vishal; Vijay S. Pande (2007). "Protein folding under confinement: A role for solvent". Proceedings of the National Academy of Sciences of the United States of America. 104 (25): 10430–10434. Bibcode:2007PNAS..10410430L. doi:10.1073/pnas.0608256104. PMC 1965530. PMID 17563390.
Vincent A. Voelz; Vijay R. Singh; William J. Wedemeyer; Lisa J. Lapidus; Vijay S. Pande (2010). "Unfolded-State Dynamics and Structure of Protein L Characterized by Simulation and Experiment". Journal of the American Chemical Society. 132 (13): 4702–4709. Bibcode:2010JAChS.132.4702V. doi:10.1021/ja908369h. PMC 2853762. PMID 20218718.
Caroline Hadley (2004). "Biologists think bigger". EMBO Reports. 5 (3): 236–238. doi:10.1038/sj.embor.7400108. PMC 1299019. PMID 14993921.
G Brent Irvine; Omar M El-Agnaf; Ganesh M Shankar; Dominic M Walsh (2008). "Protein Aggregation in the Brain: The Molecular Basis for Alzheimer's and Parkinson's Diseases". Molecular Medicine (review). 14 (7–8): 451–464. doi:10.2119/2007-00100.Irvine. PMC 2274891. PMID 18368143.
Robin Roychaudhuri; Mingfeng Yang; Minako M. Hoshi; David B. Teplow (2008). "Amyloid β-Protein Assembly and Alzheimer Disease". Journal of Biological Chemistry. 284 (8): 4749–53. doi:10.1074/jbc.R800036200. PMC 3837440. PMID 18845536.
Nicholas W. Kelley; V. Vishal; Grant A. Krafft; Vijay S. Pande. (2008). "Simulating oligomerization at experimental concentrations and long timescales: A Markov state model approach". Journal of Chemical Physics. 129 (21): 214707. Bibcode:2008JChPh.129u4707K. doi:10.1063/1.3010881. PMC 2674793. PMID 19063575.
P. Novick; J. Rajadas; C.W. Liu; N. W. Kelley; M. Inayathullah; V. S. Pande (2011). Buehler, Markus J. (ed.). "Rationally Designed Turn Promoting Mutation in the Amyloid-β Peptide Sequence Stabilizes Oligomers in Solution". PLOS ONE. 6 (7) e21776. Bibcode:2011PLoSO...621776R. doi:10.1371/journal.pone.0021776. PMC 3142112. PMID 21799748.
Gregory R Bowman; Xuhui Huang; Vijay S Pande (2010). "Network models for molecular kinetics and their initial applications to human health". Cell Research (review). 20 (6): 622–630. doi:10.1038/cr.2010.57. PMC 4441225. PMID 20421891.
Paul A. Novick; Dahabada H. Lopes; Kim M. Branson; Alexandra Esteras-Chopo; Isabella A. Graef; Gal Bitan; Vijay S. Pande (2012). "Design of β-Amyloid Aggregation Inhibitors from a Predicted Structural Motif". Journal of Medicinal Chemistry. 55 (7): 3002–10. doi:10.1021/jm201332p. PMC 3766731. PMID 22420626.
Nicholas W. Kelley; Xuhui Huang; Stephen Tam; Christoph Spiess; Judith Frydman; Vijay S. Pande (2009). "The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation". Journal of Molecular Biology. 388 (5): 919–27. doi:10.1016/j.jmb.2009.01.032. PMC 2677131. PMID 19361448.
Aron M. Levin; Darren L. Bates; Aaron M. Ring; Carsten Krieg; Jack T. Lin; Leon Su; Ignacio Moraga; Miro E. Raeber; Gregory R. Bowman; Paul Novick; Vijay S. Pande; C. Garrison Fathman; Onur Boyman; K. Christopher Garcia (2012). "Exploiting a natural conformational switch to engineer an interleukin-2 'superkine'". Nature. 484 (7395): 529–33. Bibcode:2012Natur.484..529L. doi:10.1038/nature10975. PMC 3338870. PMID 22446627.
Gautieri A, Uzel S, Vesentini S, Redaelli A, Buehler MJ (2009). "Molecular and mesoscale disease mechanisms of Osteogenesis Imperfecta". Biophysical Journal. 97 (3): 857–865. Bibcode:2009BpJ....97..857G. doi:10.1016/j.bpj.2009.04.059. PMC 2718154. PMID 19651044.
Peter M. Kasson; Daniel L. Ensign; Vijay S. Pande (2009). "Combining Molecular Dynamics with Bayesian Analysis To Predict and Evaluate Ligand-Binding Mutations in Influenza Hemagglutinin". Journal of the American Chemical Society. 131 (32): 11338–11340. Bibcode:2009JAChS.13111338K. doi:10.1021/ja904557w. PMC 2737089. PMID 19637916.
Peter M. Kasson; Vijay S. Pande (2009). "Combining mutual information with structural analysis to screen for functionally important residues in influenza hemagglutinin". Pacific Symposium on Biocomputing: 492–503. doi:10.1142/9789812836939_0047. ISBN 978-981-283-692-2. PMC 2811693. PMID 19209725.{{cite journal}}: CS1 maint: periodical has ISBN (link)
Gregory R. Bowman; Phillip L. Geissler (July 2012). "Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites". PNAS. 109 (29): 11681–6. Bibcode:2012PNAS..10911681B. doi:10.1073/pnas.1209309109. PMC 3406870. PMID 22753506.
Paula M. Petrone; Christopher D. Snow; Del Lucent; Vijay S. Pande (2008). "Side-chain recognition and gating in the ribosome exit tunnel". Proceedings of the National Academy of Sciences. 105 (43): 16549–54. Bibcode:2008PNAS..10516549P. doi:10.1073/pnas.0801795105. PMC 2575457. PMID 18946046.
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Daniel L. Ensign; Peter M. Kasson; Vijay S. Pande (2007). "Heterogeneity Even at the Speed Limit of Folding: Large-scale Molecular Dynamics Study of a Fast-folding Variant of the Villin Headpiece". Journal of Molecular Biology. 374 (3): 806–816. doi:10.1016/j.jmb.2007.09.069. PMC 3689540. PMID 17950314.
G. R. Bowman; V. S. Pande (2009). Hofmann, Andreas (ed.). "The Roles of Entropy and Kinetics in Structure Prediction". PLOS ONE. 4 (6) e5840. Bibcode:2009PLoSO...4.5840B. doi:10.1371/journal.pone.0005840. PMC 2688754. PMID 19513117.
Thomas J. Lane; Gregory R. Bowman; Kyle A Beauchamp; Vincent Alvin Voelz; Vijay S. Pande (2011). "Markov State Model Reveals Folding and Functional Dynamics in Ultra-Long MD Trajectories". Journal of the American Chemical Society. 133 (45): 18413–9. Bibcode:2011JAChS.13318413L. doi:10.1021/ja207470h. PMC 3227799. PMID 21988563.

nvidia.com (Global: 2,958^th place; English: 2,263^rd place)

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open.ac.uk (Global: 5,137^th place; English: 3,294^th place)

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play.google.com (Global: 1,365^th place; English: 1,034^th place)

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playstation.com (Global: 857^th place; English: 701^st place)

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semanticscholar.org (Global: 15^th place; English: 8^th place)

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Sanghyun Park; Randall J. Radmer; Teri E. Klein; Vijay S. Pande (2005). "A New Set of Molecular Mechanics Parameters for Hydroxyproline and Its Use in Molecular Dynamics Simulations of Collagen-Like Peptides". Journal of Computational Chemistry. 26 (15): 1612–1616. Bibcode:2005JCoCh..26.1612P. doi:10.1002/jcc.20301. PMID 16170799. S2CID 13051327.
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M. R. Shirts; V. S. Pande. (2000). "Screen Savers of the World, Unite!". Science. 290 (5498): 1903–1904. doi:10.1126/science.290.5498.1903. PMID 17742054. S2CID 2854586.
John D. Owens; David Luebke; Naga Govindaraju; Mark Harris; Jens Krüger; Aaron Lefohn; Timothy J. Purcell (2007). "A Survey of General-Purpose Computation on Graphics Hardware". Computer Graphics Forum. 26 (1): 80–113. doi:10.1111/j.1467-8659.2007.01012.x. S2CID 62756490.
I. Haque; V. S. Pande (2010). "Hard Data on Soft Errors: A Large-Scale Assessment of Real-World Error Rates in GPGPU". 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing. pp. 691–696. arXiv:0910.0505. doi:10.1109/CCGRID.2010.84. ISBN 978-1-4244-6987-1. S2CID 10723933.
Edgar Luttmann; Daniel L. Ensign; Vishal Vaidyanathan; Mike Houston; Noam Rimon; Jeppe Øland; Guha Jayachandran; Mark Friedrichs; Vijay S. Pande (2008). "Accelerating Molecular Dynamic Simulation on the Cell processor and PlayStation 3". Journal of Computational Chemistry. 30 (2): 268–274. doi:10.1002/jcc.21054. PMID 18615421. S2CID 33047431.
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stackexchange.com (Global: 4,114^th place; English: 3,027^th place)

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stackoverflow.com (Global: 9,249^th place; English: 6,951^st place)

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stanford.edu (Global: 194^th place; English: 182^nd place)

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technologyreview.com (Global: 2,515^th place; English: 1,716^th place)

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tomshardware.com (Global: 3,042^nd place; English: 1,982^nd place)

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twitter.com (Global: 43^rd place; English: 43^rd place)

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typepad.com (Global: 1,805^th place; English: 1,102^nd place)

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Vijay Pande (June 8, 2012). "FAHcon 2012: Thinking about how far FAH has come". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved June 12, 2012.
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Vijay Pande (December 18, 2008). "New FAH results on possible new Alzheimer's drug presented". Folding@home. typepad.com. Archived from the original on September 8, 2012. Retrieved September 23, 2011.
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Vijay Pande (February 24, 2012). "Protein folding and viral infection". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved March 4, 2012.
Vijay Pande (February 27, 2012). "New methods for computational drug design". Folding@home. typepad.com. Archived from the original on September 23, 2012. Retrieved April 1, 2012.
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Vijay Pande (April 5, 2011). "More transparency in testing". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved October 14, 2011.
Vijay Pande (September 25, 2009). "Update on new FAH cores and clients". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved February 24, 2012.
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Vijay Pande (September 18, 2008). "Life with Playstation – a new update to the FAH/PS3 client". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved February 24, 2012.
Vijay Pande (June 15, 2008). "What does the SMP core do?". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 7, 2011.
Vijay Pande (March 8, 2008). "New Windows client/core development (SMP and classic clients)". Folding@home. typepad.com. Archived from the original on October 15, 2012. Retrieved September 30, 2011.
Vijay Pande (February 7, 2012). "Update on "bigadv-16", the new bigadv rollout". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved February 9, 2012.
Vijay Pande (July 2, 2011). "Change in the points system for bigadv work units". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved February 24, 2012.
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Vijay Pande (March 22, 2012). "Web page revamp and v7 rollout". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved March 22, 2012.
Vijay Pande (March 31, 2011). "Core 16 for ATI released; also note on NVIDIA GPU support for older boards". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 7, 2011.
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Vijay Pande (December 18, 2008). "New FAH results on possible new Alzheimer's drug presented". Folding@home. typepad.com. Archived from the original on September 8, 2012. Retrieved September 23, 2011.
yslin (Pande lab member) (July 22, 2011). "New project p6871 [Classic]". Folding@home. phpBB Group. Archived from the original on October 30, 2013. Retrieved March 17, 2012.(registration required)
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Vijay Pande (December 22, 2009). "Release of new Protomol (Core B4) WUs". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 23, 2011.
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TJ Lane (Pande lab member) (June 8, 2011). "Project 7600 Description". Folding@home. foldingathome.org. Archived from the original on January 6, 2016. Retrieved March 31, 2012.
Vijay Pande (February 24, 2012). "Protein folding and viral infection". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved March 4, 2012.
Vijay Pande (February 27, 2012). "New methods for computational drug design". Folding@home. typepad.com. Archived from the original on September 23, 2012. Retrieved April 1, 2012.
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Gregory Bowman (July 23, 2012). "Searching for new drug targets". Folding@home. typepad.com. Archived from the original on September 21, 2012. Retrieved September 27, 2011.
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Peter Kasson (Pande lab member) (January 24, 2010). "upcoming release of SMP2 cores". Folding@home. phpBB Group. Archived from the original on November 30, 2012. Retrieved September 30, 2011.
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Bruce Borden (August 7, 2011). "Re: Gromacs Cannot Continue Further". Folding@home. phpBB Group. Archived from the original on March 31, 2012. Retrieved August 7, 2011.
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Vijay Pande (September 25, 2009). "Update on new FAH cores and clients". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved February 24, 2012.
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PantherX (September 2, 2010). "Re: Can Folding@home damage any part of my PC?". Folding@home. phpBB Group. Archived from the original on November 30, 2012. Retrieved February 25, 2012.
Vijay Pande (June 17, 2009). "How does FAH code development and sysadmin get done?". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved October 14, 2011.
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Vijay Pande (April 10, 2008). "GPU2 open beta". Folding@home. typepad.com. Archived from the original on October 9, 2010. Retrieved September 7, 2011.
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Vijay Pande (April 24, 2010). "Prepping for the GPU3 rolling: new client and NVIDIA FAH GPU clients will (in the future) need CUDA 2.2 or later". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved September 8, 2011.
Vijay Pande (May 25, 2010). "Folding@home: Open beta release of the GPU3 client/core". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 7, 2011.
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Pande lab. "Client Statistics by OS". Folding@home. foldingathome.org. Archived from the original on September 3, 2015. Retrieved July 8, 2013.
Vijay Pande (September 18, 2008). "Life with Playstation – a new update to the FAH/PS3 client". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved February 24, 2012.
Pande lab (May 30, 2012). "PS3 FAQ". Folding@home. foldingathome.org. Archived from the original (FAQ) on May 13, 2013. Retrieved July 8, 2013.
Vijay Pande (June 15, 2008). "What does the SMP core do?". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 7, 2011.
Vijay Pande (March 8, 2008). "New Windows client/core development (SMP and classic clients)". Folding@home. typepad.com. Archived from the original on October 15, 2012. Retrieved September 30, 2011.
Peter Kasson (Pande lab member) (July 15, 2009). "new release: extra-large work units". Folding@home. phpBB Group. Archived from the original on November 11, 2012. Retrieved October 9, 2011.
Vijay Pande (February 7, 2012). "Update on "bigadv-16", the new bigadv rollout". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved February 9, 2012.
Vijay Pande (July 2, 2011). "Change in the points system for bigadv work units". Folding@home. typepad.com. Archived from the original on October 18, 2012. Retrieved February 24, 2012.
Pande lab (March 23, 2012). "Windows (FAH V7) Installation Guide". Folding@home. foldingathome.org. Archived from the original (Guide) on October 28, 2012. Retrieved July 8, 2013.
Vijay Pande (March 29, 2011). "Client version 7 now in open beta". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved August 14, 2011.
Vijay Pande (March 22, 2012). "Web page revamp and v7 rollout". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved March 22, 2012.
Vijay Pande (March 31, 2011). "Core 16 for ATI released; also note on NVIDIA GPU support for older boards". Folding@home. typepad.com. Archived from the original on October 3, 2012. Retrieved September 7, 2011.
aschofield; jcoffland (October 3, 2011). "Ticket #736 (Link to GPL in FAHControl)". Folding@home. Trac. Archived from the original on May 28, 2012. Retrieved October 12, 2012.
"NaCL Web Client Shutdown Notice". Folding@Home. Archived from the original on April 12, 2019. Retrieved August 29, 2019.
Vijay Pande (October 13, 2011). "Comparison between FAH and Anton's approaches". Folding@home. typepad.com. Archived from the original on October 5, 2012. Retrieved February 25, 2012.
TJ Lane (Pande lab member) (June 6, 2011). "Project 7610 & 7611 in Beta". Folding@home. phpBB Group. Archived from the original on August 9, 2014. Retrieved February 25, 2012.(registration required)
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worldcat.org (Global: 4^th place; English: 4^th place)

search.worldcat.org

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Vickie, Curtis (April 20, 2018). Online citizen science and the widening of academia: distributed engagement with research and knowledge production. Cham, Switzerland: Springer International Publishing. ISBN 978-3-319-77664-4. OCLC 1034547418.
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P. Eastman; V. S. Pande (2010). "OpenMM: A Hardware-Independent Framework for Molecular Simulations". Computing in Science and Engineering. 12 (4): 34–39. Bibcode:2010CSE....12d..34E. doi:10.1109/MCSE.2010.27. ISSN 1521-9615. PMC 4486654. PMID 26146490.

worldcommunitygrid.org (Global: low place; English: low place)

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Julia Evangelou Strait (February 26, 2019). "Computational biology project aims to better understand protein folding". Retrieved March 8, 2020.

zenodo.org (Global: 737^th place; English: 426^th place)

M Hollstein; D Sidransky; B Vogelstein; CC Harris (1991). "p53 mutations in human cancers". Science. 253 (5015): 49–53. Bibcode:1991Sci...253...49H. doi:10.1126/science.1905840. PMID 1905840. S2CID 38527914.

Folding@home (English Wikipedia)

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top500.org (Global: 8,086^th place; English: 7,694^th place)

twitter.com (Global: 43^rd place; English: 43^rd place)

typepad.com (Global: 1,805^th place; English: 1,102^nd place)

ubuntu.com (Global: 3,845^th place; English: 4,505^th place)

uow.edu.au (Global: 7,259^th place; English: 4,435^th place)

virginia.edu (Global: 1,203^rd place; English: 734^th place)

web.archive.org (Global: 1^st place; English: 1^st place)

worldcat.org (Global: 4^th place; English: 4^th place)

wustl.edu (Global: 3,400^th place; English: 2,101^st place)

zenodo.org (Global: 737^th place; English: 426^th place)