Foldit (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Foldit" in English language version.

refsWebsite

Global rank English rank

24nih.gov

4^th place

12doi.org

2^nd place

6harvard.edu

18^th place

17^th place

3washington.edu

1,067^th place

749^th place

1centerforgamescience.com

low place

1nytimes.com

7^th place

1rosettacommons.org

low place

1eurekalert.org

3,538^th place

3,083^rd place

1technologyreview.com

1,943^rd place

1,253^rd place

1wired.com

193^rd place

152^nd place

1scientificamerican.com

896^th place

674^th place

1huffingtonpost.com

109^th place

87^th place

1nature.com

234^th place

397^th place

1fold.it

low place

1digitellinc.com

low place

centerforgamescience.com

University of Washington, Center for Game Science

digitellinc.com

acs.digitellinc.com

"Drugit: Crowd-sourcing molecular design of non-peptidic VHL binders".

doi.org

Cooper S, Khatib F, Treuille A, Barbero J, Lee J, Beenen M, et al. (August 2010). "Predicting protein structures with a multiplayer online game". Nature. 466 (7307): 756–60. Bibcode:2010Natur.466..756C. doi:10.1038/nature09304. PMC 2956414. PMID 20686574.
Haspel N, Tsai CJ, Wolfson H, Nussinov R (June 2003). "Reducing the computational complexity of protein folding via fragment folding and assembly". Protein Science. 12 (6): 1177–87. doi:10.1110/ps.0232903. PMC 2323902. PMID 12761388.
Rocklin GJ, Chidyausiku TM, Goreshnik I, Ford A, Houliston S, Lemak A, et al. (July 2017). "Global analysis of protein folding using massively parallel design, synthesis, and testing". Science. 357 (6347): 168–175. Bibcode:2017Sci...357..168R. doi:10.1126/science.aan0693. PMC 5568797. PMID 28706065.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7: 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Khatib F, Cooper S, Tyka MD, Xu K, Makedon I, Popovic Z, et al. (November 2011). "Algorithm discovery by protein folding game players". Proceedings of the National Academy of Sciences of the United States of America. 108 (47): 18949–53. doi:10.1073/pnas.1115898108. PMC 3223433. PMID 22065763.
Khatib F, DiMaio F, Cooper S, Kazmierczyk M, Gilski M, Krzywda S, et al. (September 2011). "Crystal structure of a monomeric retroviral protease solved by protein folding game players". Nature Structural & Molecular Biology. 18 (10): 1175–7. doi:10.1038/nsmb.2119. PMC 3705907. PMID 21926992.
Gilski M, Kazmierczyk M, Krzywda S, Zábranská H, Cooper S, Popović Z, et al. (November 2011). "High-resolution structure of a retroviral protease folded as a monomer". Acta Crystallographica. Section D, Biological Crystallography. 67 (Pt 11): 907–14. doi:10.1107/S0907444911035943. PMC 3211970. PMID 22101816.
Eiben CB, Siegel JB, Bale JB, Cooper S, Khatib F, Shen BW, et al. (January 2012). "Increased Diels-Alderase activity through backbone remodeling guided by Foldit players". Nature Biotechnology. 30 (2): 190–2. doi:10.1038/nbt.2109. PMC 3566767. PMID 22267011.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7 (1): 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Keasar C, McGuffin LJ, Wallner B, Chopra G, Adhikari B, Bhattacharya D, et al. (July 2018). "An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12". Scientific Reports. 8 (1): 9939. Bibcode:2018NatSR...8.9939K. doi:10.1038/s41598-018-26812-8. PMC 6028396. PMID 29967418.
Koepnick B, Flatten J, Husain T, Ford A, Silva DA, Bick MJ, et al. (June 2019). "De novo protein design by citizen scientists". Nature. 570 (7761): 390–394. Bibcode:2019Natur.570..390K. doi:10.1038/s41586-019-1274-4. PMC 6701466. PMID 31168091.
Khatib F, Desfosses A, Koepnick B, Flatten J, Popović Z, Baker D, et al. (November 2019). "Building de novo cryo-electron microscopy structures collaboratively with citizen scientists". PLOS Biology. 17 (11): e3000472. doi:10.1371/journal.pbio.3000472. PMC 6850521. PMID 31714936.

eurekalert.org

Howard Hughes Medical Institute "Protein-folding game taps power of worldwide audience to solve difficult puzzles" Eurekalert!, August 4, 2010

fold.it

Moretti, Rocco (March 15, 2023). "VHL puzzle series paper preprint released!". fold.it.

harvard.edu

ui.adsabs.harvard.edu

Cooper S, Khatib F, Treuille A, Barbero J, Lee J, Beenen M, et al. (August 2010). "Predicting protein structures with a multiplayer online game". Nature. 466 (7307): 756–60. Bibcode:2010Natur.466..756C. doi:10.1038/nature09304. PMC 2956414. PMID 20686574.
Rocklin GJ, Chidyausiku TM, Goreshnik I, Ford A, Houliston S, Lemak A, et al. (July 2017). "Global analysis of protein folding using massively parallel design, synthesis, and testing". Science. 357 (6347): 168–175. Bibcode:2017Sci...357..168R. doi:10.1126/science.aan0693. PMC 5568797. PMID 28706065.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7: 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7 (1): 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Keasar C, McGuffin LJ, Wallner B, Chopra G, Adhikari B, Bhattacharya D, et al. (July 2018). "An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12". Scientific Reports. 8 (1): 9939. Bibcode:2018NatSR...8.9939K. doi:10.1038/s41598-018-26812-8. PMC 6028396. PMID 29967418.
Koepnick B, Flatten J, Husain T, Ford A, Silva DA, Bick MJ, et al. (June 2019). "De novo protein design by citizen scientists". Nature. 570 (7761): 390–394. Bibcode:2019Natur.570..390K. doi:10.1038/s41586-019-1274-4. PMC 6701466. PMID 31168091.

huffingtonpost.com

Praetorius D (2011-09-19). "Gamers Decode AIDS Protein That Stumped Researchers For 15 Years In Just 3 Weeks". The Huffington Post. Retrieved 17 November 2016.

nature.com

blogs.nature.com

Hersher R (April 13, 2012). "FoldIt game's next play: crowdsourcing better drug design". nature.com. Retrieved April 16, 2012.

nih.gov

ncbi.nlm.nih.gov

Cooper S, Khatib F, Treuille A, Barbero J, Lee J, Beenen M, et al. (August 2010). "Predicting protein structures with a multiplayer online game". Nature. 466 (7307): 756–60. Bibcode:2010Natur.466..756C. doi:10.1038/nature09304. PMC 2956414. PMID 20686574.
Haspel N, Tsai CJ, Wolfson H, Nussinov R (June 2003). "Reducing the computational complexity of protein folding via fragment folding and assembly". Protein Science. 12 (6): 1177–87. doi:10.1110/ps.0232903. PMC 2323902. PMID 12761388.
Rocklin GJ, Chidyausiku TM, Goreshnik I, Ford A, Houliston S, Lemak A, et al. (July 2017). "Global analysis of protein folding using massively parallel design, synthesis, and testing". Science. 357 (6347): 168–175. Bibcode:2017Sci...357..168R. doi:10.1126/science.aan0693. PMC 5568797. PMID 28706065.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7: 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Khatib F, Cooper S, Tyka MD, Xu K, Makedon I, Popovic Z, et al. (November 2011). "Algorithm discovery by protein folding game players". Proceedings of the National Academy of Sciences of the United States of America. 108 (47): 18949–53. doi:10.1073/pnas.1115898108. PMC 3223433. PMID 22065763.
Khatib F, DiMaio F, Cooper S, Kazmierczyk M, Gilski M, Krzywda S, et al. (September 2011). "Crystal structure of a monomeric retroviral protease solved by protein folding game players". Nature Structural & Molecular Biology. 18 (10): 1175–7. doi:10.1038/nsmb.2119. PMC 3705907. PMID 21926992.
Gilski M, Kazmierczyk M, Krzywda S, Zábranská H, Cooper S, Popović Z, et al. (November 2011). "High-resolution structure of a retroviral protease folded as a monomer". Acta Crystallographica. Section D, Biological Crystallography. 67 (Pt 11): 907–14. doi:10.1107/S0907444911035943. PMC 3211970. PMID 22101816.
Eiben CB, Siegel JB, Bale JB, Cooper S, Khatib F, Shen BW, et al. (January 2012). "Increased Diels-Alderase activity through backbone remodeling guided by Foldit players". Nature Biotechnology. 30 (2): 190–2. doi:10.1038/nbt.2109. PMC 3566767. PMID 22267011.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7 (1): 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Keasar C, McGuffin LJ, Wallner B, Chopra G, Adhikari B, Bhattacharya D, et al. (July 2018). "An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12". Scientific Reports. 8 (1): 9939. Bibcode:2018NatSR...8.9939K. doi:10.1038/s41598-018-26812-8. PMC 6028396. PMID 29967418.
Koepnick B, Flatten J, Husain T, Ford A, Silva DA, Bick MJ, et al. (June 2019). "De novo protein design by citizen scientists". Nature. 570 (7761): 390–394. Bibcode:2019Natur.570..390K. doi:10.1038/s41586-019-1274-4. PMC 6701466. PMID 31168091.
Khatib F, Desfosses A, Koepnick B, Flatten J, Popović Z, Baker D, et al. (November 2019). "Building de novo cryo-electron microscopy structures collaboratively with citizen scientists". PLOS Biology. 17 (11): e3000472. doi:10.1371/journal.pbio.3000472. PMC 6850521. PMID 31714936.

pubmed.ncbi.nlm.nih.gov

Cooper S, Khatib F, Treuille A, Barbero J, Lee J, Beenen M, et al. (August 2010). "Predicting protein structures with a multiplayer online game". Nature. 466 (7307): 756–60. Bibcode:2010Natur.466..756C. doi:10.1038/nature09304. PMC 2956414. PMID 20686574.
Haspel N, Tsai CJ, Wolfson H, Nussinov R (June 2003). "Reducing the computational complexity of protein folding via fragment folding and assembly". Protein Science. 12 (6): 1177–87. doi:10.1110/ps.0232903. PMC 2323902. PMID 12761388.
Rocklin GJ, Chidyausiku TM, Goreshnik I, Ford A, Houliston S, Lemak A, et al. (July 2017). "Global analysis of protein folding using massively parallel design, synthesis, and testing". Science. 357 (6347): 168–175. Bibcode:2017Sci...357..168R. doi:10.1126/science.aan0693. PMC 5568797. PMID 28706065.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7: 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Khatib F, Cooper S, Tyka MD, Xu K, Makedon I, Popovic Z, et al. (November 2011). "Algorithm discovery by protein folding game players". Proceedings of the National Academy of Sciences of the United States of America. 108 (47): 18949–53. doi:10.1073/pnas.1115898108. PMC 3223433. PMID 22065763.
Khatib F, DiMaio F, Cooper S, Kazmierczyk M, Gilski M, Krzywda S, et al. (September 2011). "Crystal structure of a monomeric retroviral protease solved by protein folding game players". Nature Structural & Molecular Biology. 18 (10): 1175–7. doi:10.1038/nsmb.2119. PMC 3705907. PMID 21926992.
Gilski M, Kazmierczyk M, Krzywda S, Zábranská H, Cooper S, Popović Z, et al. (November 2011). "High-resolution structure of a retroviral protease folded as a monomer". Acta Crystallographica. Section D, Biological Crystallography. 67 (Pt 11): 907–14. doi:10.1107/S0907444911035943. PMC 3211970. PMID 22101816.
Eiben CB, Siegel JB, Bale JB, Cooper S, Khatib F, Shen BW, et al. (January 2012). "Increased Diels-Alderase activity through backbone remodeling guided by Foldit players". Nature Biotechnology. 30 (2): 190–2. doi:10.1038/nbt.2109. PMC 3566767. PMID 22267011.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, et al. (September 2016). "Determining crystal structures through crowdsourcing and coursework". Nature Communications. 7 (1): 12549. Bibcode:2016NatCo...712549H. doi:10.1038/ncomms12549. PMC 5028414. PMID 27633552.
Keasar C, McGuffin LJ, Wallner B, Chopra G, Adhikari B, Bhattacharya D, et al. (July 2018). "An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12". Scientific Reports. 8 (1): 9939. Bibcode:2018NatSR...8.9939K. doi:10.1038/s41598-018-26812-8. PMC 6028396. PMID 29967418.
Koepnick B, Flatten J, Husain T, Ford A, Silva DA, Bick MJ, et al. (June 2019). "De novo protein design by citizen scientists". Nature. 570 (7761): 390–394. Bibcode:2019Natur.570..390K. doi:10.1038/s41586-019-1274-4. PMC 6701466. PMID 31168091.
Khatib F, Desfosses A, Koepnick B, Flatten J, Popović Z, Baker D, et al. (November 2019). "Building de novo cryo-electron microscopy structures collaboratively with citizen scientists". PLOS Biology. 17 (11): e3000472. doi:10.1371/journal.pbio.3000472. PMC 6850521. PMID 31714936.

nytimes.com

Markoff J (10 August 2010). "In a Video Game, Tackling the Complexities of Protein Folding". The New York Times. Retrieved 12 February 2013.

rosettacommons.org

"Rosetta Commons: The hub for Rosetta modeling software". RosettaCommons.org. Retrieved 17 November 2015.

scientificamerican.com

Marshall J (January 22, 2012). "Online Gamers Achieve First Crowd-Sourced Redesign of Protein". Scientific American. Retrieved February 22, 2012.

technologyreview.com

Bourzac K (2008-05-08). "Biologists Enlist Online Gamers". Technology Review. Retrieved 17 November 2016.

washington.edu

depts.washington.edu

University of Washington, Department of Biochemistry

homes.cs.washington.edu

"Zoran Popović". washington.edu.

washington.edu

Hickey, Hannah. "Computer game's high score could earn the Nobel Prize in medicine" University of Washington, May 8, 2008

wired.com

Bohannon J (2009-04-20). "Gamers Unravel the Secret Life of Protein". Wired. Retrieved 17 November 2016.