GC-content (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "GC-content" in English language version.

refsWebsite

Global rank English rank

38nih.gov

4^th place

24doi.org

2^nd place

5semanticscholar.org

11^th place

8^th place

5harvard.edu

18^th place

17^th place

2worldcat.org

5^th place

2oxfordjournals.org

1,389^th place

2,996^th place

1ncl.ac.uk

4,362^nd place

3,162^nd place

1web.archive.org

1^st place

1northwestern.edu

2,302^nd place

1,389^th place

1psu.edu

207^th place

136^th place

1handle.net

102^nd place

76^th place

1scielo.br

1,606^th place

4,312^th place

doi.org

Yakovchuk P, Protozanova E, Frank-Kamenetskii MD (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Res. 34 (2): 564–74. doi:10.1093/nar/gkj454. PMC 1360284. PMID 16449200.
Levin RE, Van Sickle C (1976). "Autolysis of high-GC isolates of Pseudomonas putrefaciens". Antonie van Leeuwenhoek. 42 (1–2): 145–55. doi:10.1007/BF00399459. PMID 7999. S2CID 9960732.
Hurst LD, Merchant AR (March 2001). "High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes". Proc. Biol. Sci. 268 (1466): 493–7. doi:10.1098/rspb.2000.1397. PMC 1088632. PMID 11296861.
Galtier, N.; Lobry, J.R. (1997). "Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in Prokaryotes". Journal of Molecular Evolution. 44 (6): 632–636. Bibcode:1997JMolE..44..632G. doi:10.1007/PL00006186. PMID 9169555. S2CID 19054315.
Yakovchuk, Peter; Protozanova, Ekaterina; Frank-Kamenetskii, Maxim D. (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Research. 34 (2): 564–574. doi:10.1093/nar/gkj454. ISSN 0305-1048. PMC 1360284. PMID 16449200.
Wilhelm J, Pingoud A, Hahn M (May 2003). "Real-time PCR-based method for the estimation of genome sizes". Nucleic Acids Res. 31 (10): e56. doi:10.1093/nar/gng056. PMC 156059. PMID 12736322.
Vinogradov AE (May 1994). "Measurement by flow cytometry of genomic AT/GC ratio and genome size". Cytometry. 16 (1): 34–40. doi:10.1002/cyto.990160106. PMID 7518377.
Bernardi G (January 2000). "Isochores and the evolutionary genomics of vertebrates". Gene. 241 (1): 3–17. doi:10.1016/S0378-1119(99)00485-0. PMID 10607893.
Furey TS, Haussler D (May 2003). "Integration of the cytogenetic map with the draft human genome sequence". Hum. Mol. Genet. 12 (9): 1037–44. doi:10.1093/hmg/ddg113. PMID 12700172.
Sumner AT, de la Torre J, Stuppia L (August 1993). "The distribution of genes on chromosomes: a cytological approach". J. Mol. Evol. 37 (2): 117–22. Bibcode:1993JMolE..37..117S. doi:10.1007/BF02407346. PMID 8411200. S2CID 24677431.
Aïssani B, Bernardi G (October 1991). "CpG islands, genes and isochores in the genomes of vertebrates". Gene. 106 (2): 185–95. doi:10.1016/0378-1119(91)90198-K. PMID 1937049.
Romiguier J, Roux C (2017). "Analytical Biases Associated with GC-Content in Molecular Evolution". Front Genet. 8: 16. doi:10.3389/fgene.2017.00016. PMC 5309256. PMID 28261263.
Pozzoli U, Menozzi G, Fumagalli M, et al. (2008). "Both selective and neutral processes drive GC content evolution in the human genome". BMC Evol. Biol. 8 (1): 99. Bibcode:2008BMCEE...8...99P. doi:10.1186/1471-2148-8-99. PMC 2292697. PMID 18371205.
Wuitschick JD, Karrer KM (1999). "Analysis of genomic G + C content, codon usage, initiator codon context and translation termination sites in Tetrahymena thermophila". J. Eukaryot. Microbiol. 46 (3): 239–47. doi:10.1111/j.1550-7408.1999.tb05120.x. PMID 10377985. S2CID 28836138.
Romiguier, Jonathan; Ranwez, Vincent; Douzery, Emmanuel J. P.; Galtier, Nicolas (1 August 2010). "Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes". Genome Research. 20 (8): 1001–1009. doi:10.1101/gr.104372.109. ISSN 1088-9051. PMC 2909565. PMID 20530252.
Birdsell JA (1 July 2002). "Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution". Mol. Biol. Evol. 19 (7): 1181–97. CiteSeerX 10.1.1.337.1535. doi:10.1093/oxfordjournals.molbev.a004176. PMID 12082137.
International Human Genome Sequencing Consortium (February 2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011. (page 876)
Musto H, Cacciò S, Rodríguez-Maseda H, Bernardi G (1997). "Compositional constraints in the extremely GC-poor genome of Plasmodium falciparum" (PDF). Mem. Inst. Oswaldo Cruz. 92 (6): 835–41. doi:10.1590/S0074-02761997000600020. PMID 9566216.
Duret L, Galtier N (2009). "Biased gene conversion and the evolution of mammalian genomic landscapes". Annu Rev Genom Hum Genet. 10: 285–311. doi:10.1146/annurev-genom-082908-150001. PMID 19630562. S2CID 9126286.
Huttener R, Thorrez L, Veld TI, et al. (2021). "Sequencing refractory regions in bird genomes are hotspots for accelerated protein evolution". BMC Ecol Evol. 21 (176): 176. doi:10.1186/s12862-021-01905-7. PMC 8449477. PMID 34537008.
Wayne LG; et al. (1987). "Report of the ad hoc committee on reconciliation of approaches to bacterial systematic". International Journal of Systematic Bacteriology. 37 (4): 463–4. doi:10.1099/00207713-37-4-463.
Ghai R, McMahon KD, Rodriguez-Valera F (2012). "Breaking a paradigm: Cosmopolitan and abundant freshwater actinobacteria are low GC". Environmental Microbiology Reports. 4 (1): 29–35. Bibcode:2012EnvMR...4...29G. doi:10.1111/j.1758-2229.2011.00274.x. PMID 23757226.
Karimi K, Wuitchik D, Oldach M, Vize P (2018). "Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences". Evol Bioinform Online. 14 (January 1, 2018): 1176934318788866. doi:10.1177/1176934318788866. PMC 6052495. PMID 30038485.
Lehnert E, Mouchka M, Burriesci M, Gallo N, Schwarz J, Pringle J (2014). "Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians". G3 (Bethesda). 4 (2): 277–95. doi:10.1534/g3.113.009084. PMC 3931562. PMID 24368779.

handle.net

hdl.handle.net

International Human Genome Sequencing Consortium (February 2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011. (page 876)

harvard.edu

ui.adsabs.harvard.edu

Galtier, N.; Lobry, J.R. (1997). "Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in Prokaryotes". Journal of Molecular Evolution. 44 (6): 632–636. Bibcode:1997JMolE..44..632G. doi:10.1007/PL00006186. PMID 9169555. S2CID 19054315.
Sumner AT, de la Torre J, Stuppia L (August 1993). "The distribution of genes on chromosomes: a cytological approach". J. Mol. Evol. 37 (2): 117–22. Bibcode:1993JMolE..37..117S. doi:10.1007/BF02407346. PMID 8411200. S2CID 24677431.
Pozzoli U, Menozzi G, Fumagalli M, et al. (2008). "Both selective and neutral processes drive GC content evolution in the human genome". BMC Evol. Biol. 8 (1): 99. Bibcode:2008BMCEE...8...99P. doi:10.1186/1471-2148-8-99. PMC 2292697. PMID 18371205.
International Human Genome Sequencing Consortium (February 2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011. (page 876)
Ghai R, McMahon KD, Rodriguez-Valera F (2012). "Breaking a paradigm: Cosmopolitan and abundant freshwater actinobacteria are low GC". Environmental Microbiology Reports. 4 (1): 29–35. Bibcode:2012EnvMR...4...29G. doi:10.1111/j.1758-2229.2011.00274.x. PMID 23757226.

ncl.ac.uk

cancerweb.ncl.ac.uk

Definition of GC – content on CancerWeb of Newcastle University, UK

nih.gov

pubmed.ncbi.nlm.nih.gov

Yakovchuk P, Protozanova E, Frank-Kamenetskii MD (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Res. 34 (2): 564–74. doi:10.1093/nar/gkj454. PMC 1360284. PMID 16449200.
Levin RE, Van Sickle C (1976). "Autolysis of high-GC isolates of Pseudomonas putrefaciens". Antonie van Leeuwenhoek. 42 (1–2): 145–55. doi:10.1007/BF00399459. PMID 7999. S2CID 9960732.
Hurst LD, Merchant AR (March 2001). "High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes". Proc. Biol. Sci. 268 (1466): 493–7. doi:10.1098/rspb.2000.1397. PMC 1088632. PMID 11296861.
Galtier, N.; Lobry, J.R. (1997). "Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in Prokaryotes". Journal of Molecular Evolution. 44 (6): 632–636. Bibcode:1997JMolE..44..632G. doi:10.1007/PL00006186. PMID 9169555. S2CID 19054315.
Yakovchuk, Peter; Protozanova, Ekaterina; Frank-Kamenetskii, Maxim D. (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Research. 34 (2): 564–574. doi:10.1093/nar/gkj454. ISSN 0305-1048. PMC 1360284. PMID 16449200.
Wilhelm J, Pingoud A, Hahn M (May 2003). "Real-time PCR-based method for the estimation of genome sizes". Nucleic Acids Res. 31 (10): e56. doi:10.1093/nar/gng056. PMC 156059. PMID 12736322.
Vinogradov AE (May 1994). "Measurement by flow cytometry of genomic AT/GC ratio and genome size". Cytometry. 16 (1): 34–40. doi:10.1002/cyto.990160106. PMID 7518377.
Bernardi G (January 2000). "Isochores and the evolutionary genomics of vertebrates". Gene. 241 (1): 3–17. doi:10.1016/S0378-1119(99)00485-0. PMID 10607893.
Furey TS, Haussler D (May 2003). "Integration of the cytogenetic map with the draft human genome sequence". Hum. Mol. Genet. 12 (9): 1037–44. doi:10.1093/hmg/ddg113. PMID 12700172.
Sumner AT, de la Torre J, Stuppia L (August 1993). "The distribution of genes on chromosomes: a cytological approach". J. Mol. Evol. 37 (2): 117–22. Bibcode:1993JMolE..37..117S. doi:10.1007/BF02407346. PMID 8411200. S2CID 24677431.
Aïssani B, Bernardi G (October 1991). "CpG islands, genes and isochores in the genomes of vertebrates". Gene. 106 (2): 185–95. doi:10.1016/0378-1119(91)90198-K. PMID 1937049.
Romiguier J, Roux C (2017). "Analytical Biases Associated with GC-Content in Molecular Evolution". Front Genet. 8: 16. doi:10.3389/fgene.2017.00016. PMC 5309256. PMID 28261263.
Pozzoli U, Menozzi G, Fumagalli M, et al. (2008). "Both selective and neutral processes drive GC content evolution in the human genome". BMC Evol. Biol. 8 (1): 99. Bibcode:2008BMCEE...8...99P. doi:10.1186/1471-2148-8-99. PMC 2292697. PMID 18371205.
Wuitschick JD, Karrer KM (1999). "Analysis of genomic G + C content, codon usage, initiator codon context and translation termination sites in Tetrahymena thermophila". J. Eukaryot. Microbiol. 46 (3): 239–47. doi:10.1111/j.1550-7408.1999.tb05120.x. PMID 10377985. S2CID 28836138.
Romiguier, Jonathan; Ranwez, Vincent; Douzery, Emmanuel J. P.; Galtier, Nicolas (1 August 2010). "Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes". Genome Research. 20 (8): 1001–1009. doi:10.1101/gr.104372.109. ISSN 1088-9051. PMC 2909565. PMID 20530252.
Birdsell JA (1 July 2002). "Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution". Mol. Biol. Evol. 19 (7): 1181–97. CiteSeerX 10.1.1.337.1535. doi:10.1093/oxfordjournals.molbev.a004176. PMID 12082137.
International Human Genome Sequencing Consortium (February 2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011. (page 876)
Musto H, Cacciò S, Rodríguez-Maseda H, Bernardi G (1997). "Compositional constraints in the extremely GC-poor genome of Plasmodium falciparum" (PDF). Mem. Inst. Oswaldo Cruz. 92 (6): 835–41. doi:10.1590/S0074-02761997000600020. PMID 9566216.
Duret L, Galtier N (2009). "Biased gene conversion and the evolution of mammalian genomic landscapes". Annu Rev Genom Hum Genet. 10: 285–311. doi:10.1146/annurev-genom-082908-150001. PMID 19630562. S2CID 9126286.
Huttener R, Thorrez L, Veld TI, et al. (2021). "Sequencing refractory regions in bird genomes are hotspots for accelerated protein evolution". BMC Ecol Evol. 21 (176): 176. doi:10.1186/s12862-021-01905-7. PMC 8449477. PMID 34537008.
Ghai R, McMahon KD, Rodriguez-Valera F (2012). "Breaking a paradigm: Cosmopolitan and abundant freshwater actinobacteria are low GC". Environmental Microbiology Reports. 4 (1): 29–35. Bibcode:2012EnvMR...4...29G. doi:10.1111/j.1758-2229.2011.00274.x. PMID 23757226.
Karimi K, Wuitchik D, Oldach M, Vize P (2018). "Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences". Evol Bioinform Online. 14 (January 1, 2018): 1176934318788866. doi:10.1177/1176934318788866. PMC 6052495. PMID 30038485.
Lehnert E, Mouchka M, Burriesci M, Gallo N, Schwarz J, Pringle J (2014). "Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians". G3 (Bethesda). 4 (2): 277–95. doi:10.1534/g3.113.009084. PMC 3931562. PMID 24368779.

ncbi.nlm.nih.gov

Yakovchuk P, Protozanova E, Frank-Kamenetskii MD (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Res. 34 (2): 564–74. doi:10.1093/nar/gkj454. PMC 1360284. PMID 16449200.
Hurst LD, Merchant AR (March 2001). "High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes". Proc. Biol. Sci. 268 (1466): 493–7. doi:10.1098/rspb.2000.1397. PMC 1088632. PMID 11296861.
Yakovchuk, Peter; Protozanova, Ekaterina; Frank-Kamenetskii, Maxim D. (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Research. 34 (2): 564–574. doi:10.1093/nar/gkj454. ISSN 0305-1048. PMC 1360284. PMID 16449200.
Wilhelm J, Pingoud A, Hahn M (May 2003). "Real-time PCR-based method for the estimation of genome sizes". Nucleic Acids Res. 31 (10): e56. doi:10.1093/nar/gng056. PMC 156059. PMID 12736322.
Romiguier J, Roux C (2017). "Analytical Biases Associated with GC-Content in Molecular Evolution". Front Genet. 8: 16. doi:10.3389/fgene.2017.00016. PMC 5309256. PMID 28261263.
Pozzoli U, Menozzi G, Fumagalli M, et al. (2008). "Both selective and neutral processes drive GC content evolution in the human genome". BMC Evol. Biol. 8 (1): 99. Bibcode:2008BMCEE...8...99P. doi:10.1186/1471-2148-8-99. PMC 2292697. PMID 18371205.
Romiguier, Jonathan; Ranwez, Vincent; Douzery, Emmanuel J. P.; Galtier, Nicolas (1 August 2010). "Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes". Genome Research. 20 (8): 1001–1009. doi:10.1101/gr.104372.109. ISSN 1088-9051. PMC 2909565. PMID 20530252.
Whole genome data of Saccharomyces cerevisiae on NCBI
Whole genome data of Arabidopsis thaliana on NCBI
Whole genome data of Plasmodium falciparum on NCBI
Huttener R, Thorrez L, Veld TI, et al. (2021). "Sequencing refractory regions in bird genomes are hotspots for accelerated protein evolution". BMC Ecol Evol. 21 (176): 176. doi:10.1186/s12862-021-01905-7. PMC 8449477. PMID 34537008.
Taxonomy browser on NCBI
Whole genome data of Streptomyces coelicolor A3(2) on NCBI
Karimi K, Wuitchik D, Oldach M, Vize P (2018). "Distinguishing Species Using GC Contents in Mixed DNA or RNA Sequences". Evol Bioinform Online. 14 (January 1, 2018): 1176934318788866. doi:10.1177/1176934318788866. PMC 6052495. PMID 30038485.
Lehnert E, Mouchka M, Burriesci M, Gallo N, Schwarz J, Pringle J (2014). "Extensive differences in gene expression between symbiotic and aposymbiotic cnidarians". G3 (Bethesda). 4 (2): 277–95. doi:10.1534/g3.113.009084. PMC 3931562. PMID 24368779.

northwestern.edu

biochem.northwestern.edu

"Definition of GC-ratio on Northwestern University, IL, USA". Archived from the original on 20 June 2010. Retrieved 11 June 2007.

oxfordjournals.org

hmg.oxfordjournals.org

Furey TS, Haussler D (May 2003). "Integration of the cytogenetic map with the draft human genome sequence". Hum. Mol. Genet. 12 (9): 1037–44. doi:10.1093/hmg/ddg113. PMID 12700172.

mbe.oxfordjournals.org

Birdsell JA (1 July 2002). "Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution". Mol. Biol. Evol. 19 (7): 1181–97. CiteSeerX 10.1.1.337.1535. doi:10.1093/oxfordjournals.molbev.a004176. PMID 12082137.

psu.edu

citeseerx.ist.psu.edu

Birdsell JA (1 July 2002). "Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution". Mol. Biol. Evol. 19 (7): 1181–97. CiteSeerX 10.1.1.337.1535. doi:10.1093/oxfordjournals.molbev.a004176. PMID 12082137.

scielo.br

Musto H, Cacciò S, Rodríguez-Maseda H, Bernardi G (1997). "Compositional constraints in the extremely GC-poor genome of Plasmodium falciparum" (PDF). Mem. Inst. Oswaldo Cruz. 92 (6): 835–41. doi:10.1590/S0074-02761997000600020. PMID 9566216.

semanticscholar.org

api.semanticscholar.org

Levin RE, Van Sickle C (1976). "Autolysis of high-GC isolates of Pseudomonas putrefaciens". Antonie van Leeuwenhoek. 42 (1–2): 145–55. doi:10.1007/BF00399459. PMID 7999. S2CID 9960732.
Galtier, N.; Lobry, J.R. (1997). "Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in Prokaryotes". Journal of Molecular Evolution. 44 (6): 632–636. Bibcode:1997JMolE..44..632G. doi:10.1007/PL00006186. PMID 9169555. S2CID 19054315.
Sumner AT, de la Torre J, Stuppia L (August 1993). "The distribution of genes on chromosomes: a cytological approach". J. Mol. Evol. 37 (2): 117–22. Bibcode:1993JMolE..37..117S. doi:10.1007/BF02407346. PMID 8411200. S2CID 24677431.
Wuitschick JD, Karrer KM (1999). "Analysis of genomic G + C content, codon usage, initiator codon context and translation termination sites in Tetrahymena thermophila". J. Eukaryot. Microbiol. 46 (3): 239–47. doi:10.1111/j.1550-7408.1999.tb05120.x. PMID 10377985. S2CID 28836138.
Duret L, Galtier N (2009). "Biased gene conversion and the evolution of mammalian genomic landscapes". Annu Rev Genom Hum Genet. 10: 285–311. doi:10.1146/annurev-genom-082908-150001. PMID 19630562. S2CID 9126286.

web.archive.org

"Definition of GC-ratio on Northwestern University, IL, USA". Archived from the original on 20 June 2010. Retrieved 11 June 2007.

worldcat.org

search.worldcat.org

Yakovchuk, Peter; Protozanova, Ekaterina; Frank-Kamenetskii, Maxim D. (2006). "Base-stacking and base-pairing contributions into thermal stability of the DNA double helix". Nucleic Acids Research. 34 (2): 564–574. doi:10.1093/nar/gkj454. ISSN 0305-1048. PMC 1360284. PMID 16449200.
Romiguier, Jonathan; Ranwez, Vincent; Douzery, Emmanuel J. P.; Galtier, Nicolas (1 August 2010). "Contrasting GC-content dynamics across 33 mammalian genomes: Relationship with life-history traits and chromosome sizes". Genome Research. 20 (8): 1001–1009. doi:10.1101/gr.104372.109. ISSN 1088-9051. PMC 2909565. PMID 20530252.