Genomics (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Genomics" in English language version.

refsWebsite

Global rank English rank

104nih.gov

4^th place

66doi.org

2^nd place

27harvard.edu

18^th place

17^th place

21semanticscholar.org

11^th place

8^th place

5web.archive.org

1^st place

3archive.org

6^th place

3worldcat.org

5^th place

2horizonpress.com

low place

1who.int

195^th place

302^nd place

1oed.com

360^th place

231^st place

1nobelprize.org

301^st place

478^th place

1stanford.edu

179^th place

183^rd place

1nytimes.com

7^th place

1bbc.co.uk

8^th place

10^th place

1genome.gov

9,308^th place

8,899^th place

1wsj.com

79^th place

65^th place

1the-scientist.com

7,827^th place

5,905^th place

1nature.com

234^th place

397^th place

1illumina.com

low place

1google.com

163^rd place

185^th place

1unam.mx

769^th place

1,834^th place

1bio-itworld.com

low place

1pacb.com

low place

1nanoporetech.com

low place

1arizona.edu

1,592^nd place

1,119^th place

1statnews.com

8,771^st place

5,253^rd place

1darkdaily.com

low place

archive.org

Culver KW, Labow MA (8 November 2002). "Genomics". In Robinson R (ed.). Genetics. Macmillan Science Library. Macmillan Reference USA. ISBN 978-0-02-865606-9.
Pevsner J (2009). Bioinformatics and functional genomics (2nd ed.). Hoboken, NJ: Wiley-Blackwell. ISBN 978-0-470-08585-1.
McElheny V (2010). Drawing the map of life: inside the Human Genome Project. New York NY: Basic Books. ISBN 978-0-465-04333-0.

arizona.edu

genomics.arizona.edu

Brent MR (January 2008). "Steady progress and recent breakthroughs in the accuracy of automated genome annotation" (PDF). Nature Reviews. Genetics. 9 (1): 62–73. doi:10.1038/nrg2220. PMID 18087260. S2CID 20412451. Archived from the original (PDF) on 2013-05-29. Retrieved 2013-01-04.

bbc.co.uk

news.bbc.co.uk

"Human gene number slashed". BBC. 20 October 2004. Retrieved 2012-12-21.

bio-itworld.com

Davies K (2011). "Powering Preventative Medicine". Bio-IT World (September–October). Archived from the original on 2016-06-06. Retrieved 2014-12-17.

darkdaily.com

"Two Boston Health Systems Enter the Growing Direct-to-Consumer Gene Sequencing Market by Opening Preventative Genomics Clinics, but Can Patients Afford the Service?". Dark Daily. The Dark Intelligence Group. 3 January 2020.

doi.org

Franklin RE, Gosling RG (April 1953). "Molecular configuration in sodium thymonucleate". Nature. 171 (4356): 740–1. Bibcode:1953Natur.171..740F. doi:10.1038/171740a0. PMID 13054694. S2CID 4268222.
Satzinger H (March 2008). "Theodor and Marcella Boveri: chromosomes and cytoplasm in heredity and development". Nature Reviews. Genetics. 9 (3): 231–238. doi:10.1038/nrg2311. PMID 18268510. S2CID 15829893.
Rossi, M.J; Kuntala, P.K; Lai, W.K.M; Yamada, N; Badjatia, N; Mittal, C; Kuzu, G; Bocklund, K; Farrell, N.P; Blanda, T.R; Mairose, J.D; Basting, A.V; Mistretta, K.S; Rocco, D.J; Perkinson, E.S; Kellogg, G.D; Mahony, S; Pugh, B.F (March 2021). "A high-resolution protein architecture of the budding yeast genome". Nature. 592 (7853): 309–314. Bibcode:2021Natur.592..309R. doi:10.1038/s41586-021-03314-8. PMC 8035251. PMID 33692541.
Kadakkuzha BM, Puthanveettil SV (July 2013). "Genomics and proteomics in solving brain complexity". Molecular BioSystems. 9 (7): 1807–1821. doi:10.1039/C3MB25391K. PMC 6425491. PMID 23615871.
O'Brien SJ (June 2022). "A decade of GigaScience: A perspective on conservation genetics". GigaScience. 11. doi:10.1093/gigascience/giac055. PMC 9197679. PMID 35701371.
Ankeny RA (June 2003). "Sequencing the genome from nematode to human: changing methods, changing science". Endeavour. 27 (2): 87–92. doi:10.1016/S0160-9327(03)00061-9. PMID 12798815.
Holley RW, Everett GA, Madison JT, Zamir A (May 1965). "Nucleotide sequences in the yeast alanine transfer ribonucleic acid". The Journal of Biological Chemistry. 240 (5): 2122–2128. doi:10.1016/S0021-9258(18)97435-1. PMID 14299636.
Holley RW, Apgar J, Everett GA, Madison JT, Marquisee M, Merrill SH, et al. (March 1965). "Structure of a Ribonucleic Acid". Science. 147 (3664): 1462–1465. Bibcode:1965Sci...147.1462H. doi:10.1126/science.147.3664.1462. PMID 14263761. S2CID 40989800.
Nirenberg M, Leder P, Bernfield M, Brimacombe R, Trupin J, Rottman F, O'Neal C (May 1965). "RNA codewords and protein synthesis, VII. On the general nature of the RNA code". Proceedings of the National Academy of Sciences of the United States of America. 53 (5): 1161–1168. Bibcode:1965PNAS...53.1161N. doi:10.1073/pnas.53.5.1161. PMC 301388. PMID 5330357.
Min Jou W, Haegeman G, Ysebaert M, Fiers W (May 1972). "Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein". Nature. 237 (5350): 82–88. Bibcode:1972Natur.237...82J. doi:10.1038/237082a0. PMID 4555447. S2CID 4153893.
Fiers W, Contreras R, Duerinck F, Haegeman G, Iserentant D, Merregaert J, et al. (April 1976). "Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene". Nature. 260 (5551): 500–507. Bibcode:1976Natur.260..500F. doi:10.1038/260500a0. PMID 1264203. S2CID 4289674.
Fiers W, Contreras R, Haegemann G, Rogiers R, Van de Voorde A, Van Heuverswyn H, et al. (May 1978). "Complete nucleotide sequence of SV40 DNA". Nature. 273 (5658): 113–120. Bibcode:1978Natur.273..113F. doi:10.1038/273113a0. PMID 205802. S2CID 1634424.
Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, Fiddes CA, et al. (February 1977). "Nucleotide sequence of bacteriophage phi X174 DNA". Nature. 265 (5596): 687–695. Bibcode:1977Natur.265..687S. doi:10.1038/265687a0. PMID 870828. S2CID 4206886.
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F (December 2003). "Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique". Journal of Biotechnology. 106 (2–3): 121–133. doi:10.1016/j.jbiotec.2003.08.008. PMID 14651855.
Sanger F, Nicklen S, Coulson AR (December 1977). "DNA sequencing with chain-terminating inhibitors". Proceedings of the National Academy of Sciences of the United States of America. 74 (12): 5463–5467. Bibcode:1977PNAS...74.5463S. doi:10.1073/pnas.74.12.5463. PMC 431765. PMID 271968.
Maxam AM, Gilbert W (February 1977). "A new method for sequencing DNA". Proceedings of the National Academy of Sciences of the United States of America. 74 (2): 560–564. Bibcode:1977PNAS...74..560M. doi:10.1073/pnas.74.2.560. PMC 392330. PMID 265521.
Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, Drouin J, et al. (April 1981). "Sequence and organization of the human mitochondrial genome". Nature. 290 (5806): 457–465. Bibcode:1981Natur.290..457A. doi:10.1038/290457a0. PMID 7219534. S2CID 4355527.(subscription required)
Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, et al. (September 1986). "The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression". The EMBO Journal. 5 (9): 2043–2049. doi:10.1002/j.1460-2075.1986.tb04464.x. PMC 1167080. PMID 16453699.
Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, et al. (1986). "Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA". Nature. 322 (6079): 572–574. Bibcode:1986Natur.322..572O. doi:10.1038/322572a0. S2CID 4311952.
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, et al. (May 1992). "The complete DNA sequence of yeast chromosome III". Nature. 357 (6373): 38–46. Bibcode:1992Natur.357...38O. doi:10.1038/357038a0. PMID 1574125. S2CID 4271784.
Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, et al. (July 1995). "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd". Science. 269 (5223): 496–512. Bibcode:1995Sci...269..496F. doi:10.1126/science.7542800. PMID 7542800. S2CID 10423613.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, et al. (October 1996). "Life with 6000 genes". Science. 274 (5287): 546, 563–546, 567. Bibcode:1996Sci...274..546G. doi:10.1126/science.274.5287.546. PMID 8849441. S2CID 211123134.(subscription required)
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. (December 2009). "A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea". Nature. 462 (7276): 1056–1060. Bibcode:2009Natur.462.1056W. doi:10.1038/nature08656. PMC 3073058. PMID 20033048.
Yue GH, Lo LC, Zhu ZY, Lin G, Feng F (April 2006). "The complete nucleotide sequence of the mitochondrial genome of Tetraodon nigroviridis". DNA Sequence. 17 (2): 115–121. doi:10.1080/10425170600700378. PMID 17076253. S2CID 21797344.
Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, et al. (November 2012). "An integrated map of genetic variation from 1,092 human genomes". Nature. 491 (7422): 56–65. Bibcode:2012Natur.491...56T. doi:10.1038/nature11632. PMC 3498066. PMID 23128226.
Nielsen R (October 2010). "Genomics: In search of rare human variants". Nature. 467 (7319): 1050–1051. Bibcode:2010Natur.467.1050N. doi:10.1038/4671050a. PMID 20981085.
Eisen JA (July 2012). "Badomics words and the power and peril of the ome-meme". GigaScience. 1 (1): 6. doi:10.1186/2047-217X-1-6. PMC 3617454. PMID 23587201.
Chaston J, Douglas AE (August 2012). "Making the most of "omics" for symbiosis research". The Biological Bulletin. 223 (1): 21–29. doi:10.1086/BBLv223n1p21. PMC 3491573. PMID 22983030.
McCutcheon JP, von Dohlen CD (August 2011). "An interdependent metabolic patchwork in the nested symbiosis of mealybugs". Current Biology. 21 (16): 1366–1372. Bibcode:2011CBio...21.1366M. doi:10.1016/j.cub.2011.06.051. PMC 3169327. PMID 21835622.
Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, et al. (July 2012). "A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers". BMC Genomics. 13: 341. doi:10.1186/1471-2164-13-341. PMC 3431227. PMID 22827831.
Staden R (June 1979). "A strategy of DNA sequencing employing computer programs". Nucleic Acids Research. 6 (7): 2601–2610. doi:10.1093/nar/6.7.2601. PMC 327874. PMID 461197.
Anderson S (July 1981). "Shotgun DNA sequencing using cloned DNase I-generated fragments". Nucleic Acids Research. 9 (13): 3015–3027. doi:10.1093/nar/9.13.3015. PMC 327328. PMID 6269069.
Pop M (July 2009). "Genome assembly reborn: recent computational challenges". Briefings in Bioinformatics. 10 (4): 354–366. doi:10.1093/bib/bbp026. PMC 2691937. PMID 19482960.
Sanger F, Coulson AR (May 1975). "A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase". Journal of Molecular Biology. 94 (3): 441–448. doi:10.1016/0022-2836(75)90213-2. PMID 1100841.
Mavromatis K, Land ML, Brettin TS, Quest DJ, Copeland A, Clum A, et al. (2012). Liu Z (ed.). "The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation". PLOS ONE. 7 (12): e48837. Bibcode:2012PLoSO...748837M. doi:10.1371/journal.pone.0048837. PMC 3520994. PMID 23251337.
Hall N (May 2007). "Advanced sequencing technologies and their wider impact in microbiology". The Journal of Experimental Biology. 210 (Pt 9): 1518–1525. Bibcode:2007JExpB.210.1518H. doi:10.1242/jeb.001370. PMID 17449817.
Church GM (January 2006). "Genomes for all". Scientific American. 294 (1): 46–54. Bibcode:2006SciAm.294a..46C. doi:10.1038/scientificamerican0106-46. PMID 16468433. S2CID 28769137.
ten Bosch JR, Grody WW (November 2008). "Keeping up with the next generation: massively parallel sequencing in clinical diagnostics". The Journal of Molecular Diagnostics. 10 (6): 484–492. doi:10.2353/jmoldx.2008.080027. PMC 2570630. PMID 18832462.
Tucker T, Marra M, Friedman JM (August 2009). "Massively parallel sequencing: the next big thing in genetic medicine". American Journal of Human Genetics. 85 (2): 142–154. doi:10.1016/j.ajhg.2009.06.022. PMC 2725244. PMID 19679224.
Mardis ER (2008). "Next-generation DNA sequencing methods" (PDF). Annual Review of Genomics and Human Genetics. 9: 387–402. doi:10.1146/annurev.genom.9.081307.164359. PMID 18576944. Archived from the original (PDF) on 2013-05-18. Retrieved 2013-01-04.
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, et al. (October 2009). "Genomics. Genome project standards in a new era of sequencing". Science. 326 (5950): 236–237. Bibcode:2009Sci...326..236C. doi:10.1126/science.1180614. PMC 3854948. PMID 19815760.
Stein L (July 2001). "Genome annotation: from sequence to biology". Nature Reviews. Genetics. 2 (7): 493–503. doi:10.1038/35080529. PMID 11433356. S2CID 12044602.
Brent MR (January 2008). "Steady progress and recent breakthroughs in the accuracy of automated genome annotation" (PDF). Nature Reviews. Genetics. 9 (1): 62–73. doi:10.1038/nrg2220. PMID 18087260. S2CID 20412451. Archived from the original (PDF) on 2013-05-29. Retrieved 2013-01-04.
Flicek P, Ahmed I, Amode MR, Barrell D, Beal K, Brent S, et al. (January 2013). "Ensembl 2013". Nucleic Acids Research. 41 (Database issue): D48 – D55. doi:10.1093/nar/gks1236. PMC 3531136. PMID 23203987.
Keith JM (2008). Keith JM (ed.). Bioinformatics. Methods in Molecular Biology. Vol. 453. pp. v–vi. doi:10.1007/978-1-60327-429-6. ISBN 978-1-60327-428-9. PMID 18720577.
Marsden RL, Lewis TA, Orengo CA (March 2007). "Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint". BMC Bioinformatics. 8: 86. doi:10.1186/1471-2105-8-86. PMC 1829165. PMID 17349043.
Brenner SE, Levitt M (January 2000). "Expectations from structural genomics". Protein Science. 9 (1): 197–200. doi:10.1110/ps.9.1.197. PMC 2144435. PMID 10739263.
Brenner SE (October 2001). "A tour of structural genomics". Nature Reviews. Genetics. 2 (10): 801–809. doi:10.1038/35093574. PMID 11584296. S2CID 5656447.
Gallego, L.D; Schneider, M; Mittal, C; Romanuska, Anete; Gudino Carrillo, R.M; Schubert, T; Pugh, B.F; Kohler, A (March 2020). "Phase separation directs ubiquitination of gene-body nucleosomes". Nature. 579 (7800): 592–597. Bibcode:2020Natur.579..592G. doi:10.1038/s41586-020-2097-z. PMC 7481934. PMID 32214243.
Sams, K.L; Mukai, C; Marks, B.A; Mittal, C; Demeter, E.A; Nelissen, S; Grenier, J.K; Tate, A.E; Ahmed, F; Coonrod, S.A (October 2022). "Delayed puberty, gonadotropin abnormalities and subfertility in male Padi2/Padi4 double knockout mice". Reprod Biol Endocrinol. 20 (1): 150. doi:10.1186/s12958-022-01018-w. PMC 9555066. PMID 36224627.
Laird PW (March 2010). "Principles and challenges of genomewide DNA methylation analysis". Nature Reviews. Genetics. 11 (3): 191–203. doi:10.1038/nrg2732. PMID 20125086. S2CID 6780101.
Hugenholtz P, Goebel BM, Pace NR (September 1998). "Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity". Journal of Bacteriology. 180 (18): 4765–4774. doi:10.1128/JB.180.18.4765-4774.1998. PMC 107498. PMID 9733676.
Eisen JA (March 2007). "Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes". PLOS Biology. 5 (3): e82. doi:10.1371/journal.pbio.0050082. PMC 1821061. PMID 17355177.
Canchaya C, Proux C, Fournous G, Bruttin A, Brüssow H (June 2003). "Prophage genomics". Microbiology and Molecular Biology Reviews. 67 (2): 238–76, table of contents. doi:10.1128/MMBR.67.2.238-276.2003. PMC 156470. PMID 12794192.
Fouts DE (November 2006). "Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences". Nucleic Acids Research. 34 (20): 5839–5851. doi:10.1093/nar/gkl732. PMC 1635311. PMID 17062630.
Hudson KL (September 2011). "Genomics, health care, and society". The New England Journal of Medicine. 365 (11): 1033–1041. doi:10.1056/NEJMra1010517. PMID 21916641.
O'Donnell CJ, Nabel EG (December 2011). "Genomics of cardiovascular disease". The New England Journal of Medicine. 365 (22): 2098–2109. doi:10.1056/NEJMra1105239. PMID 22129254.
Lu YF, Goldstein DB, Angrist M, Cavalleri G (July 2014). "Personalized medicine and human genetic diversity". Cold Spring Harbor Perspectives in Medicine. 4 (9): a008581. doi:10.1101/cshperspect.a008581. PMC 4143101. PMID 25059740.
Ashley EA, Butte AJ, Wheeler MT, Chen R, Klein TE, Dewey FE, et al. (May 2010). "Clinical assessment incorporating a personal genome". Lancet. 375 (9725): 1525–1535. doi:10.1016/S0140-6736(10)60452-7. PMC 2937184. PMID 20435227.
Dewey FE, Chen R, Cordero SP, Ormond KE, Caleshu C, Karczewski KJ, et al. (September 2011). "Phased whole-genome genetic risk in a family quartet using a major allele reference sequence". PLOS Genetics. 7 (9): e1002280. doi:10.1371/journal.pgen.1002280. PMC 3174201. PMID 21935354.
Dewey FE, Grove ME, Pan C, Goldstein BA, Bernstein JA, Chaib H, et al. (March 2014). "Clinical interpretation and implications of whole-genome sequencing". JAMA. 311 (10): 1035–1045. doi:10.1001/jama.2014.1717. PMC 4119063. PMID 24618965.
Bycroft, Clare; Freeman, Colin; Petkova, Desislava; Band, Gavin; Elliott, Lloyd T.; Sharp, Kevin; Motyer, Allan; Vukcevic, Damjan; Delaneau, Olivier; O'Connell, Jared; Cortes, Adrian; Welsh, Samantha; Young, Alan; Effingham, Mark; McVean, Gil (October 2018). "The UK Biobank resource with deep phenotyping and genomic data". Nature. 562 (7726): 203–209. Bibcode:2018Natur.562..203B. doi:10.1038/s41586-018-0579-z. ISSN 1476-4687. PMC 6786975. PMID 30305743.
Baker M (May 2011). "Synthetic genomes: The next step for the synthetic genome". Nature. 473 (7347): 403, 405–403, 408. Bibcode:2011Natur.473..403B. doi:10.1038/473403a. PMID 21593873. S2CID 205064528.
Luikart G, England PR, Tallmon D, Jordan S, Taberlet P (December 2003). "The power and promise of population genomics: from genotyping to genome typing". Nature Reviews. Genetics. 4 (12): 981–94. doi:10.1038/nrg1226. PMID 14631358. S2CID 8516357.
Frankham R (1 September 2010). "Challenges and opportunities of genetic approaches to biological conservation". Biological Conservation. 143 (9): 1922–1923. Bibcode:2010BCons.143.1919F. doi:10.1016/j.biocon.2010.05.011.
Allendorf FW, Hohenlohe PA, Luikart G (October 2010). "Genomics and the future of conservation genetics". Nature Reviews. Genetics. 11 (10): 697–709. doi:10.1038/nrg2844. PMID 20847747. S2CID 10811958.

genome.gov

National Human Genome Research Institute (14 July 2004). "Dog Genome Assembled: Canine Genome Now Available to Research Community Worldwide". Genome.gov. Retrieved 2012-01-20.

google.com

US 20050100900, Kawashima EH, Farinelli L, Mayer P, "Method of nucleic acid amplification", published 12 May 2005, issued 26 July 2011, assigned to Solexa Ltd Great Britain.

harvard.edu

ui.adsabs.harvard.edu

Franklin RE, Gosling RG (April 1953). "Molecular configuration in sodium thymonucleate". Nature. 171 (4356): 740–1. Bibcode:1953Natur.171..740F. doi:10.1038/171740a0. PMID 13054694. S2CID 4268222.
Rossi, M.J; Kuntala, P.K; Lai, W.K.M; Yamada, N; Badjatia, N; Mittal, C; Kuzu, G; Bocklund, K; Farrell, N.P; Blanda, T.R; Mairose, J.D; Basting, A.V; Mistretta, K.S; Rocco, D.J; Perkinson, E.S; Kellogg, G.D; Mahony, S; Pugh, B.F (March 2021). "A high-resolution protein architecture of the budding yeast genome". Nature. 592 (7853): 309–314. Bibcode:2021Natur.592..309R. doi:10.1038/s41586-021-03314-8. PMC 8035251. PMID 33692541.
Holley RW, Apgar J, Everett GA, Madison JT, Marquisee M, Merrill SH, et al. (March 1965). "Structure of a Ribonucleic Acid". Science. 147 (3664): 1462–1465. Bibcode:1965Sci...147.1462H. doi:10.1126/science.147.3664.1462. PMID 14263761. S2CID 40989800.
Nirenberg M, Leder P, Bernfield M, Brimacombe R, Trupin J, Rottman F, O'Neal C (May 1965). "RNA codewords and protein synthesis, VII. On the general nature of the RNA code". Proceedings of the National Academy of Sciences of the United States of America. 53 (5): 1161–1168. Bibcode:1965PNAS...53.1161N. doi:10.1073/pnas.53.5.1161. PMC 301388. PMID 5330357.
Min Jou W, Haegeman G, Ysebaert M, Fiers W (May 1972). "Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein". Nature. 237 (5350): 82–88. Bibcode:1972Natur.237...82J. doi:10.1038/237082a0. PMID 4555447. S2CID 4153893.
Fiers W, Contreras R, Duerinck F, Haegeman G, Iserentant D, Merregaert J, et al. (April 1976). "Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene". Nature. 260 (5551): 500–507. Bibcode:1976Natur.260..500F. doi:10.1038/260500a0. PMID 1264203. S2CID 4289674.
Fiers W, Contreras R, Haegemann G, Rogiers R, Van de Voorde A, Van Heuverswyn H, et al. (May 1978). "Complete nucleotide sequence of SV40 DNA". Nature. 273 (5658): 113–120. Bibcode:1978Natur.273..113F. doi:10.1038/273113a0. PMID 205802. S2CID 1634424.
Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, Fiddes CA, et al. (February 1977). "Nucleotide sequence of bacteriophage phi X174 DNA". Nature. 265 (5596): 687–695. Bibcode:1977Natur.265..687S. doi:10.1038/265687a0. PMID 870828. S2CID 4206886.
Sanger F, Nicklen S, Coulson AR (December 1977). "DNA sequencing with chain-terminating inhibitors". Proceedings of the National Academy of Sciences of the United States of America. 74 (12): 5463–5467. Bibcode:1977PNAS...74.5463S. doi:10.1073/pnas.74.12.5463. PMC 431765. PMID 271968.
Maxam AM, Gilbert W (February 1977). "A new method for sequencing DNA". Proceedings of the National Academy of Sciences of the United States of America. 74 (2): 560–564. Bibcode:1977PNAS...74..560M. doi:10.1073/pnas.74.2.560. PMC 392330. PMID 265521.
Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, Drouin J, et al. (April 1981). "Sequence and organization of the human mitochondrial genome". Nature. 290 (5806): 457–465. Bibcode:1981Natur.290..457A. doi:10.1038/290457a0. PMID 7219534. S2CID 4355527.(subscription required)
Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, et al. (1986). "Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA". Nature. 322 (6079): 572–574. Bibcode:1986Natur.322..572O. doi:10.1038/322572a0. S2CID 4311952.
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, et al. (May 1992). "The complete DNA sequence of yeast chromosome III". Nature. 357 (6373): 38–46. Bibcode:1992Natur.357...38O. doi:10.1038/357038a0. PMID 1574125. S2CID 4271784.
Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, et al. (July 1995). "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd". Science. 269 (5223): 496–512. Bibcode:1995Sci...269..496F. doi:10.1126/science.7542800. PMID 7542800. S2CID 10423613.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, et al. (October 1996). "Life with 6000 genes". Science. 274 (5287): 546, 563–546, 567. Bibcode:1996Sci...274..546G. doi:10.1126/science.274.5287.546. PMID 8849441. S2CID 211123134.(subscription required)
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. (December 2009). "A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea". Nature. 462 (7276): 1056–1060. Bibcode:2009Natur.462.1056W. doi:10.1038/nature08656. PMC 3073058. PMID 20033048.
Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, et al. (November 2012). "An integrated map of genetic variation from 1,092 human genomes". Nature. 491 (7422): 56–65. Bibcode:2012Natur.491...56T. doi:10.1038/nature11632. PMC 3498066. PMID 23128226.
Nielsen R (October 2010). "Genomics: In search of rare human variants". Nature. 467 (7319): 1050–1051. Bibcode:2010Natur.467.1050N. doi:10.1038/4671050a. PMID 20981085.
McCutcheon JP, von Dohlen CD (August 2011). "An interdependent metabolic patchwork in the nested symbiosis of mealybugs". Current Biology. 21 (16): 1366–1372. Bibcode:2011CBio...21.1366M. doi:10.1016/j.cub.2011.06.051. PMC 3169327. PMID 21835622.
Mavromatis K, Land ML, Brettin TS, Quest DJ, Copeland A, Clum A, et al. (2012). Liu Z (ed.). "The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation". PLOS ONE. 7 (12): e48837. Bibcode:2012PLoSO...748837M. doi:10.1371/journal.pone.0048837. PMC 3520994. PMID 23251337.
Hall N (May 2007). "Advanced sequencing technologies and their wider impact in microbiology". The Journal of Experimental Biology. 210 (Pt 9): 1518–1525. Bibcode:2007JExpB.210.1518H. doi:10.1242/jeb.001370. PMID 17449817.
Church GM (January 2006). "Genomes for all". Scientific American. 294 (1): 46–54. Bibcode:2006SciAm.294a..46C. doi:10.1038/scientificamerican0106-46. PMID 16468433. S2CID 28769137.
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, et al. (October 2009). "Genomics. Genome project standards in a new era of sequencing". Science. 326 (5950): 236–237. Bibcode:2009Sci...326..236C. doi:10.1126/science.1180614. PMC 3854948. PMID 19815760.
Gallego, L.D; Schneider, M; Mittal, C; Romanuska, Anete; Gudino Carrillo, R.M; Schubert, T; Pugh, B.F; Kohler, A (March 2020). "Phase separation directs ubiquitination of gene-body nucleosomes". Nature. 579 (7800): 592–597. Bibcode:2020Natur.579..592G. doi:10.1038/s41586-020-2097-z. PMC 7481934. PMID 32214243.
Bycroft, Clare; Freeman, Colin; Petkova, Desislava; Band, Gavin; Elliott, Lloyd T.; Sharp, Kevin; Motyer, Allan; Vukcevic, Damjan; Delaneau, Olivier; O'Connell, Jared; Cortes, Adrian; Welsh, Samantha; Young, Alan; Effingham, Mark; McVean, Gil (October 2018). "The UK Biobank resource with deep phenotyping and genomic data". Nature. 562 (7726): 203–209. Bibcode:2018Natur.562..203B. doi:10.1038/s41586-018-0579-z. ISSN 1476-4687. PMC 6786975. PMID 30305743.
Baker M (May 2011). "Synthetic genomes: The next step for the synthetic genome". Nature. 473 (7347): 403, 405–403, 408. Bibcode:2011Natur.473..403B. doi:10.1038/473403a. PMID 21593873. S2CID 205064528.
Frankham R (1 September 2010). "Challenges and opportunities of genetic approaches to biological conservation". Biological Conservation. 143 (9): 1922–1923. Bibcode:2010BCons.143.1919F. doi:10.1016/j.biocon.2010.05.011.

horizonpress.com

McGrath S, van Sinderen D, eds. (2007). Bacteriophage: Genetics and Molecular Biology (1st ed.). Caister Academic Press. ISBN 978-1-904455-14-1.
Herrero A, Flores E, eds. (2008). The Cyanobacteria: Molecular Biology, Genomics and Evolution (1st ed.). Caister Academic Press. ISBN 978-1-904455-15-8.

illumina.com

Illumina, Inc. (28 February 2012). An Introduction to Next-Generation Sequencing Technology (PDF). San Diego, California, USA: Illumina, Inc. p. 12. Archived from the original (PDF) on 2013-04-11. Retrieved 2012-12-28.

nanoporetech.com

"home". Oxford Nanopore Technologies.

nature.com

blogs.nature.com

Baker M (14 September 2012). "Benchtop sequencers ship off" (Blog). Nature News Blog. Retrieved 2012-12-22.

nih.gov

pubmed.ncbi.nlm.nih.gov

Franklin RE, Gosling RG (April 1953). "Molecular configuration in sodium thymonucleate". Nature. 171 (4356): 740–1. Bibcode:1953Natur.171..740F. doi:10.1038/171740a0. PMID 13054694. S2CID 4268222.
Satzinger H (March 2008). "Theodor and Marcella Boveri: chromosomes and cytoplasm in heredity and development". Nature Reviews. Genetics. 9 (3): 231–238. doi:10.1038/nrg2311. PMID 18268510. S2CID 15829893.
Cremer T, Cremer C (2006). "Rise, fall and resurrection of chromosome territories: a historical perspective. Part I. The rise of chromosome territories". European Journal of Histochemistry. 50 (3): 161–176. PMID 16920639.
Rossi, M.J; Kuntala, P.K; Lai, W.K.M; Yamada, N; Badjatia, N; Mittal, C; Kuzu, G; Bocklund, K; Farrell, N.P; Blanda, T.R; Mairose, J.D; Basting, A.V; Mistretta, K.S; Rocco, D.J; Perkinson, E.S; Kellogg, G.D; Mahony, S; Pugh, B.F (March 2021). "A high-resolution protein architecture of the budding yeast genome". Nature. 592 (7853): 309–314. Bibcode:2021Natur.592..309R. doi:10.1038/s41586-021-03314-8. PMC 8035251. PMID 33692541.
Kadakkuzha BM, Puthanveettil SV (July 2013). "Genomics and proteomics in solving brain complexity". Molecular BioSystems. 9 (7): 1807–1821. doi:10.1039/C3MB25391K. PMC 6425491. PMID 23615871.
Yadav SP (December 2007). "The wholeness in suffix -omics, -omes, and the word om". Journal of Biomolecular Techniques. 18 (5): 277. PMC 2392988. PMID 18166670.
O'Brien SJ (June 2022). "A decade of GigaScience: A perspective on conservation genetics". GigaScience. 11. doi:10.1093/gigascience/giac055. PMC 9197679. PMID 35701371.
Ankeny RA (June 2003). "Sequencing the genome from nematode to human: changing methods, changing science". Endeavour. 27 (2): 87–92. doi:10.1016/S0160-9327(03)00061-9. PMID 12798815.
Holley RW, Everett GA, Madison JT, Zamir A (May 1965). "Nucleotide sequences in the yeast alanine transfer ribonucleic acid". The Journal of Biological Chemistry. 240 (5): 2122–2128. doi:10.1016/S0021-9258(18)97435-1. PMID 14299636.
Holley RW, Apgar J, Everett GA, Madison JT, Marquisee M, Merrill SH, et al. (March 1965). "Structure of a Ribonucleic Acid". Science. 147 (3664): 1462–1465. Bibcode:1965Sci...147.1462H. doi:10.1126/science.147.3664.1462. PMID 14263761. S2CID 40989800.
Nirenberg M, Leder P, Bernfield M, Brimacombe R, Trupin J, Rottman F, O'Neal C (May 1965). "RNA codewords and protein synthesis, VII. On the general nature of the RNA code". Proceedings of the National Academy of Sciences of the United States of America. 53 (5): 1161–1168. Bibcode:1965PNAS...53.1161N. doi:10.1073/pnas.53.5.1161. PMC 301388. PMID 5330357.
Min Jou W, Haegeman G, Ysebaert M, Fiers W (May 1972). "Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein". Nature. 237 (5350): 82–88. Bibcode:1972Natur.237...82J. doi:10.1038/237082a0. PMID 4555447. S2CID 4153893.
Fiers W, Contreras R, Duerinck F, Haegeman G, Iserentant D, Merregaert J, et al. (April 1976). "Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene". Nature. 260 (5551): 500–507. Bibcode:1976Natur.260..500F. doi:10.1038/260500a0. PMID 1264203. S2CID 4289674.
Fiers W, Contreras R, Haegemann G, Rogiers R, Van de Voorde A, Van Heuverswyn H, et al. (May 1978). "Complete nucleotide sequence of SV40 DNA". Nature. 273 (5658): 113–120. Bibcode:1978Natur.273..113F. doi:10.1038/273113a0. PMID 205802. S2CID 1634424.
Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, Fiddes CA, et al. (February 1977). "Nucleotide sequence of bacteriophage phi X174 DNA". Nature. 265 (5596): 687–695. Bibcode:1977Natur.265..687S. doi:10.1038/265687a0. PMID 870828. S2CID 4206886.
Kaiser O, Bartels D, Bekel T, Goesmann A, Kespohl S, Pühler A, Meyer F (December 2003). "Whole genome shotgun sequencing guided by bioinformatics pipelines--an optimized approach for an established technique". Journal of Biotechnology. 106 (2–3): 121–133. doi:10.1016/j.jbiotec.2003.08.008. PMID 14651855.
Sanger F, Nicklen S, Coulson AR (December 1977). "DNA sequencing with chain-terminating inhibitors". Proceedings of the National Academy of Sciences of the United States of America. 74 (12): 5463–5467. Bibcode:1977PNAS...74.5463S. doi:10.1073/pnas.74.12.5463. PMC 431765. PMID 271968.
Maxam AM, Gilbert W (February 1977). "A new method for sequencing DNA". Proceedings of the National Academy of Sciences of the United States of America. 74 (2): 560–564. Bibcode:1977PNAS...74..560M. doi:10.1073/pnas.74.2.560. PMC 392330. PMID 265521.
Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, Drouin J, et al. (April 1981). "Sequence and organization of the human mitochondrial genome". Nature. 290 (5806): 457–465. Bibcode:1981Natur.290..457A. doi:10.1038/290457a0. PMID 7219534. S2CID 4355527.(subscription required)
Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, et al. (September 1986). "The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression". The EMBO Journal. 5 (9): 2043–2049. doi:10.1002/j.1460-2075.1986.tb04464.x. PMC 1167080. PMID 16453699.
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, et al. (May 1992). "The complete DNA sequence of yeast chromosome III". Nature. 357 (6373): 38–46. Bibcode:1992Natur.357...38O. doi:10.1038/357038a0. PMID 1574125. S2CID 4271784.
Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, et al. (July 1995). "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd". Science. 269 (5223): 496–512. Bibcode:1995Sci...269..496F. doi:10.1126/science.7542800. PMID 7542800. S2CID 10423613.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, et al. (October 1996). "Life with 6000 genes". Science. 274 (5287): 546, 563–546, 567. Bibcode:1996Sci...274..546G. doi:10.1126/science.274.5287.546. PMID 8849441. S2CID 211123134.(subscription required)
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. (December 2009). "A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea". Nature. 462 (7276): 1056–1060. Bibcode:2009Natur.462.1056W. doi:10.1038/nature08656. PMC 3073058. PMID 20033048.
Yue GH, Lo LC, Zhu ZY, Lin G, Feng F (April 2006). "The complete nucleotide sequence of the mitochondrial genome of Tetraodon nigroviridis". DNA Sequence. 17 (2): 115–121. doi:10.1080/10425170600700378. PMID 17076253. S2CID 21797344.
Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, et al. (November 2012). "An integrated map of genetic variation from 1,092 human genomes". Nature. 491 (7422): 56–65. Bibcode:2012Natur.491...56T. doi:10.1038/nature11632. PMC 3498066. PMID 23128226.
Nielsen R (October 2010). "Genomics: In search of rare human variants". Nature. 467 (7319): 1050–1051. Bibcode:2010Natur.467.1050N. doi:10.1038/4671050a. PMID 20981085.
Eisen JA (July 2012). "Badomics words and the power and peril of the ome-meme". GigaScience. 1 (1): 6. doi:10.1186/2047-217X-1-6. PMC 3617454. PMID 23587201.
Chaston J, Douglas AE (August 2012). "Making the most of "omics" for symbiosis research". The Biological Bulletin. 223 (1): 21–29. doi:10.1086/BBLv223n1p21. PMC 3491573. PMID 22983030.
McCutcheon JP, von Dohlen CD (August 2011). "An interdependent metabolic patchwork in the nested symbiosis of mealybugs". Current Biology. 21 (16): 1366–1372. Bibcode:2011CBio...21.1366M. doi:10.1016/j.cub.2011.06.051. PMC 3169327. PMID 21835622.
Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, et al. (July 2012). "A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers". BMC Genomics. 13: 341. doi:10.1186/1471-2164-13-341. PMC 3431227. PMID 22827831.
Staden R (June 1979). "A strategy of DNA sequencing employing computer programs". Nucleic Acids Research. 6 (7): 2601–2610. doi:10.1093/nar/6.7.2601. PMC 327874. PMID 461197.
Anderson S (July 1981). "Shotgun DNA sequencing using cloned DNase I-generated fragments". Nucleic Acids Research. 9 (13): 3015–3027. doi:10.1093/nar/9.13.3015. PMC 327328. PMID 6269069.
Pop M (July 2009). "Genome assembly reborn: recent computational challenges". Briefings in Bioinformatics. 10 (4): 354–366. doi:10.1093/bib/bbp026. PMC 2691937. PMID 19482960.
Sanger F, Coulson AR (May 1975). "A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase". Journal of Molecular Biology. 94 (3): 441–448. doi:10.1016/0022-2836(75)90213-2. PMID 1100841.
Mavromatis K, Land ML, Brettin TS, Quest DJ, Copeland A, Clum A, et al. (2012). Liu Z (ed.). "The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation". PLOS ONE. 7 (12): e48837. Bibcode:2012PLoSO...748837M. doi:10.1371/journal.pone.0048837. PMC 3520994. PMID 23251337.
Hall N (May 2007). "Advanced sequencing technologies and their wider impact in microbiology". The Journal of Experimental Biology. 210 (Pt 9): 1518–1525. Bibcode:2007JExpB.210.1518H. doi:10.1242/jeb.001370. PMID 17449817.
Church GM (January 2006). "Genomes for all". Scientific American. 294 (1): 46–54. Bibcode:2006SciAm.294a..46C. doi:10.1038/scientificamerican0106-46. PMID 16468433. S2CID 28769137.
ten Bosch JR, Grody WW (November 2008). "Keeping up with the next generation: massively parallel sequencing in clinical diagnostics". The Journal of Molecular Diagnostics. 10 (6): 484–492. doi:10.2353/jmoldx.2008.080027. PMC 2570630. PMID 18832462.
Tucker T, Marra M, Friedman JM (August 2009). "Massively parallel sequencing: the next big thing in genetic medicine". American Journal of Human Genetics. 85 (2): 142–154. doi:10.1016/j.ajhg.2009.06.022. PMC 2725244. PMID 19679224.
Mardis ER (2008). "Next-generation DNA sequencing methods" (PDF). Annual Review of Genomics and Human Genetics. 9: 387–402. doi:10.1146/annurev.genom.9.081307.164359. PMID 18576944. Archived from the original (PDF) on 2013-05-18. Retrieved 2013-01-04.
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, et al. (October 2009). "Genomics. Genome project standards in a new era of sequencing". Science. 326 (5950): 236–237. Bibcode:2009Sci...326..236C. doi:10.1126/science.1180614. PMC 3854948. PMID 19815760.
Stein L (July 2001). "Genome annotation: from sequence to biology". Nature Reviews. Genetics. 2 (7): 493–503. doi:10.1038/35080529. PMID 11433356. S2CID 12044602.
Brent MR (January 2008). "Steady progress and recent breakthroughs in the accuracy of automated genome annotation" (PDF). Nature Reviews. Genetics. 9 (1): 62–73. doi:10.1038/nrg2220. PMID 18087260. S2CID 20412451. Archived from the original (PDF) on 2013-05-29. Retrieved 2013-01-04.
Flicek P, Ahmed I, Amode MR, Barrell D, Beal K, Brent S, et al. (January 2013). "Ensembl 2013". Nucleic Acids Research. 41 (Database issue): D48 – D55. doi:10.1093/nar/gks1236. PMC 3531136. PMID 23203987.
Keith JM (2008). Keith JM (ed.). Bioinformatics. Methods in Molecular Biology. Vol. 453. pp. v–vi. doi:10.1007/978-1-60327-429-6. ISBN 978-1-60327-428-9. PMID 18720577.
Marsden RL, Lewis TA, Orengo CA (March 2007). "Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint". BMC Bioinformatics. 8: 86. doi:10.1186/1471-2105-8-86. PMC 1829165. PMID 17349043.
Brenner SE, Levitt M (January 2000). "Expectations from structural genomics". Protein Science. 9 (1): 197–200. doi:10.1110/ps.9.1.197. PMC 2144435. PMID 10739263.
Brenner SE (October 2001). "A tour of structural genomics". Nature Reviews. Genetics. 2 (10): 801–809. doi:10.1038/35093574. PMID 11584296. S2CID 5656447.
Gallego, L.D; Schneider, M; Mittal, C; Romanuska, Anete; Gudino Carrillo, R.M; Schubert, T; Pugh, B.F; Kohler, A (March 2020). "Phase separation directs ubiquitination of gene-body nucleosomes". Nature. 579 (7800): 592–597. Bibcode:2020Natur.579..592G. doi:10.1038/s41586-020-2097-z. PMC 7481934. PMID 32214243.
Sams, K.L; Mukai, C; Marks, B.A; Mittal, C; Demeter, E.A; Nelissen, S; Grenier, J.K; Tate, A.E; Ahmed, F; Coonrod, S.A (October 2022). "Delayed puberty, gonadotropin abnormalities and subfertility in male Padi2/Padi4 double knockout mice". Reprod Biol Endocrinol. 20 (1): 150. doi:10.1186/s12958-022-01018-w. PMC 9555066. PMID 36224627.
Laird PW (March 2010). "Principles and challenges of genomewide DNA methylation analysis". Nature Reviews. Genetics. 11 (3): 191–203. doi:10.1038/nrg2732. PMID 20125086. S2CID 6780101.
Hugenholtz P, Goebel BM, Pace NR (September 1998). "Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity". Journal of Bacteriology. 180 (18): 4765–4774. doi:10.1128/JB.180.18.4765-4774.1998. PMC 107498. PMID 9733676.
Eisen JA (March 2007). "Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes". PLOS Biology. 5 (3): e82. doi:10.1371/journal.pbio.0050082. PMC 1821061. PMID 17355177.
Canchaya C, Proux C, Fournous G, Bruttin A, Brüssow H (June 2003). "Prophage genomics". Microbiology and Molecular Biology Reviews. 67 (2): 238–76, table of contents. doi:10.1128/MMBR.67.2.238-276.2003. PMC 156470. PMID 12794192.
Fouts DE (November 2006). "Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences". Nucleic Acids Research. 34 (20): 5839–5851. doi:10.1093/nar/gkl732. PMC 1635311. PMID 17062630.
Hudson KL (September 2011). "Genomics, health care, and society". The New England Journal of Medicine. 365 (11): 1033–1041. doi:10.1056/NEJMra1010517. PMID 21916641.
O'Donnell CJ, Nabel EG (December 2011). "Genomics of cardiovascular disease". The New England Journal of Medicine. 365 (22): 2098–2109. doi:10.1056/NEJMra1105239. PMID 22129254.
Lu YF, Goldstein DB, Angrist M, Cavalleri G (July 2014). "Personalized medicine and human genetic diversity". Cold Spring Harbor Perspectives in Medicine. 4 (9): a008581. doi:10.1101/cshperspect.a008581. PMC 4143101. PMID 25059740.
Ashley EA, Butte AJ, Wheeler MT, Chen R, Klein TE, Dewey FE, et al. (May 2010). "Clinical assessment incorporating a personal genome". Lancet. 375 (9725): 1525–1535. doi:10.1016/S0140-6736(10)60452-7. PMC 2937184. PMID 20435227.
Dewey FE, Chen R, Cordero SP, Ormond KE, Caleshu C, Karczewski KJ, et al. (September 2011). "Phased whole-genome genetic risk in a family quartet using a major allele reference sequence". PLOS Genetics. 7 (9): e1002280. doi:10.1371/journal.pgen.1002280. PMC 3174201. PMID 21935354.
Dewey FE, Grove ME, Pan C, Goldstein BA, Bernstein JA, Chaib H, et al. (March 2014). "Clinical interpretation and implications of whole-genome sequencing". JAMA. 311 (10): 1035–1045. doi:10.1001/jama.2014.1717. PMC 4119063. PMID 24618965.
Bycroft, Clare; Freeman, Colin; Petkova, Desislava; Band, Gavin; Elliott, Lloyd T.; Sharp, Kevin; Motyer, Allan; Vukcevic, Damjan; Delaneau, Olivier; O'Connell, Jared; Cortes, Adrian; Welsh, Samantha; Young, Alan; Effingham, Mark; McVean, Gil (October 2018). "The UK Biobank resource with deep phenotyping and genomic data". Nature. 562 (7726): 203–209. Bibcode:2018Natur.562..203B. doi:10.1038/s41586-018-0579-z. ISSN 1476-4687. PMC 6786975. PMID 30305743.
Baker M (May 2011). "Synthetic genomes: The next step for the synthetic genome". Nature. 473 (7347): 403, 405–403, 408. Bibcode:2011Natur.473..403B. doi:10.1038/473403a. PMID 21593873. S2CID 205064528.
Luikart G, England PR, Tallmon D, Jordan S, Taberlet P (December 2003). "The power and promise of population genomics: from genotyping to genome typing". Nature Reviews. Genetics. 4 (12): 981–94. doi:10.1038/nrg1226. PMID 14631358. S2CID 8516357.
Allendorf FW, Hohenlohe PA, Luikart G (October 2010). "Genomics and the future of conservation genetics". Nature Reviews. Genetics. 11 (10): 697–709. doi:10.1038/nrg2844. PMID 20847747. S2CID 10811958.

ncbi.nlm.nih.gov

Rossi, M.J; Kuntala, P.K; Lai, W.K.M; Yamada, N; Badjatia, N; Mittal, C; Kuzu, G; Bocklund, K; Farrell, N.P; Blanda, T.R; Mairose, J.D; Basting, A.V; Mistretta, K.S; Rocco, D.J; Perkinson, E.S; Kellogg, G.D; Mahony, S; Pugh, B.F (March 2021). "A high-resolution protein architecture of the budding yeast genome". Nature. 592 (7853): 309–314. Bibcode:2021Natur.592..309R. doi:10.1038/s41586-021-03314-8. PMC 8035251. PMID 33692541.
Kadakkuzha BM, Puthanveettil SV (July 2013). "Genomics and proteomics in solving brain complexity". Molecular BioSystems. 9 (7): 1807–1821. doi:10.1039/C3MB25391K. PMC 6425491. PMID 23615871.
Yadav SP (December 2007). "The wholeness in suffix -omics, -omes, and the word om". Journal of Biomolecular Techniques. 18 (5): 277. PMC 2392988. PMID 18166670.
O'Brien SJ (June 2022). "A decade of GigaScience: A perspective on conservation genetics". GigaScience. 11. doi:10.1093/gigascience/giac055. PMC 9197679. PMID 35701371.
Nirenberg M, Leder P, Bernfield M, Brimacombe R, Trupin J, Rottman F, O'Neal C (May 1965). "RNA codewords and protein synthesis, VII. On the general nature of the RNA code". Proceedings of the National Academy of Sciences of the United States of America. 53 (5): 1161–1168. Bibcode:1965PNAS...53.1161N. doi:10.1073/pnas.53.5.1161. PMC 301388. PMID 5330357.
Sanger F, Nicklen S, Coulson AR (December 1977). "DNA sequencing with chain-terminating inhibitors". Proceedings of the National Academy of Sciences of the United States of America. 74 (12): 5463–5467. Bibcode:1977PNAS...74.5463S. doi:10.1073/pnas.74.12.5463. PMC 431765. PMID 271968.
Maxam AM, Gilbert W (February 1977). "A new method for sequencing DNA". Proceedings of the National Academy of Sciences of the United States of America. 74 (2): 560–564. Bibcode:1977PNAS...74..560M. doi:10.1073/pnas.74.2.560. PMC 392330. PMID 265521.
Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, et al. (September 1986). "The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression". The EMBO Journal. 5 (9): 2043–2049. doi:10.1002/j.1460-2075.1986.tb04464.x. PMC 1167080. PMID 16453699.
"Complete genomes: Viruses". NCBI. 17 November 2011. Retrieved 2011-11-18.
"Genome Project Statistics". Entrez Genome Project. 7 October 2011. Retrieved 2011-11-18.
Wu D, Hugenholtz P, Mavromatis K, Pukall R, Dalin E, Ivanova NN, et al. (December 2009). "A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea". Nature. 462 (7276): 1056–1060. Bibcode:2009Natur.462.1056W. doi:10.1038/nature08656. PMC 3073058. PMID 20033048.
Abecasis GR, Auton A, Brooks LD, DePristo MA, Durbin RM, Handsaker RE, et al. (November 2012). "An integrated map of genetic variation from 1,092 human genomes". Nature. 491 (7422): 56–65. Bibcode:2012Natur.491...56T. doi:10.1038/nature11632. PMC 3498066. PMID 23128226.
Eisen JA (July 2012). "Badomics words and the power and peril of the ome-meme". GigaScience. 1 (1): 6. doi:10.1186/2047-217X-1-6. PMC 3617454. PMID 23587201.
Chaston J, Douglas AE (August 2012). "Making the most of "omics" for symbiosis research". The Biological Bulletin. 223 (1): 21–29. doi:10.1086/BBLv223n1p21. PMC 3491573. PMID 22983030.
McCutcheon JP, von Dohlen CD (August 2011). "An interdependent metabolic patchwork in the nested symbiosis of mealybugs". Current Biology. 21 (16): 1366–1372. Bibcode:2011CBio...21.1366M. doi:10.1016/j.cub.2011.06.051. PMC 3169327. PMID 21835622.
Quail MA, Smith M, Coupland P, Otto TD, Harris SR, Connor TR, et al. (July 2012). "A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers". BMC Genomics. 13: 341. doi:10.1186/1471-2164-13-341. PMC 3431227. PMID 22827831.
Staden R (June 1979). "A strategy of DNA sequencing employing computer programs". Nucleic Acids Research. 6 (7): 2601–2610. doi:10.1093/nar/6.7.2601. PMC 327874. PMID 461197.
Anderson S (July 1981). "Shotgun DNA sequencing using cloned DNase I-generated fragments". Nucleic Acids Research. 9 (13): 3015–3027. doi:10.1093/nar/9.13.3015. PMC 327328. PMID 6269069.
Pop M (July 2009). "Genome assembly reborn: recent computational challenges". Briefings in Bioinformatics. 10 (4): 354–366. doi:10.1093/bib/bbp026. PMC 2691937. PMID 19482960.
Mavromatis K, Land ML, Brettin TS, Quest DJ, Copeland A, Clum A, et al. (2012). Liu Z (ed.). "The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation". PLOS ONE. 7 (12): e48837. Bibcode:2012PLoSO...748837M. doi:10.1371/journal.pone.0048837. PMC 3520994. PMID 23251337.
ten Bosch JR, Grody WW (November 2008). "Keeping up with the next generation: massively parallel sequencing in clinical diagnostics". The Journal of Molecular Diagnostics. 10 (6): 484–492. doi:10.2353/jmoldx.2008.080027. PMC 2570630. PMID 18832462.
Tucker T, Marra M, Friedman JM (August 2009). "Massively parallel sequencing: the next big thing in genetic medicine". American Journal of Human Genetics. 85 (2): 142–154. doi:10.1016/j.ajhg.2009.06.022. PMC 2725244. PMID 19679224.
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, et al. (October 2009). "Genomics. Genome project standards in a new era of sequencing". Science. 326 (5950): 236–237. Bibcode:2009Sci...326..236C. doi:10.1126/science.1180614. PMC 3854948. PMID 19815760.
Flicek P, Ahmed I, Amode MR, Barrell D, Beal K, Brent S, et al. (January 2013). "Ensembl 2013". Nucleic Acids Research. 41 (Database issue): D48 – D55. doi:10.1093/nar/gks1236. PMC 3531136. PMID 23203987.
Marsden RL, Lewis TA, Orengo CA (March 2007). "Towards a comprehensive structural coverage of completed genomes: a structural genomics viewpoint". BMC Bioinformatics. 8: 86. doi:10.1186/1471-2105-8-86. PMC 1829165. PMID 17349043.
Brenner SE, Levitt M (January 2000). "Expectations from structural genomics". Protein Science. 9 (1): 197–200. doi:10.1110/ps.9.1.197. PMC 2144435. PMID 10739263.
Gallego, L.D; Schneider, M; Mittal, C; Romanuska, Anete; Gudino Carrillo, R.M; Schubert, T; Pugh, B.F; Kohler, A (March 2020). "Phase separation directs ubiquitination of gene-body nucleosomes". Nature. 579 (7800): 592–597. Bibcode:2020Natur.579..592G. doi:10.1038/s41586-020-2097-z. PMC 7481934. PMID 32214243.
Sams, K.L; Mukai, C; Marks, B.A; Mittal, C; Demeter, E.A; Nelissen, S; Grenier, J.K; Tate, A.E; Ahmed, F; Coonrod, S.A (October 2022). "Delayed puberty, gonadotropin abnormalities and subfertility in male Padi2/Padi4 double knockout mice". Reprod Biol Endocrinol. 20 (1): 150. doi:10.1186/s12958-022-01018-w. PMC 9555066. PMID 36224627.
Hugenholtz P, Goebel BM, Pace NR (September 1998). "Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity". Journal of Bacteriology. 180 (18): 4765–4774. doi:10.1128/JB.180.18.4765-4774.1998. PMC 107498. PMID 9733676.
Eisen JA (March 2007). "Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes". PLOS Biology. 5 (3): e82. doi:10.1371/journal.pbio.0050082. PMC 1821061. PMID 17355177.
Canchaya C, Proux C, Fournous G, Bruttin A, Brüssow H (June 2003). "Prophage genomics". Microbiology and Molecular Biology Reviews. 67 (2): 238–76, table of contents. doi:10.1128/MMBR.67.2.238-276.2003. PMC 156470. PMID 12794192.
Fouts DE (November 2006). "Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences". Nucleic Acids Research. 34 (20): 5839–5851. doi:10.1093/nar/gkl732. PMC 1635311. PMID 17062630.
Lu YF, Goldstein DB, Angrist M, Cavalleri G (July 2014). "Personalized medicine and human genetic diversity". Cold Spring Harbor Perspectives in Medicine. 4 (9): a008581. doi:10.1101/cshperspect.a008581. PMC 4143101. PMID 25059740.
Ashley EA, Butte AJ, Wheeler MT, Chen R, Klein TE, Dewey FE, et al. (May 2010). "Clinical assessment incorporating a personal genome". Lancet. 375 (9725): 1525–1535. doi:10.1016/S0140-6736(10)60452-7. PMC 2937184. PMID 20435227.
Dewey FE, Chen R, Cordero SP, Ormond KE, Caleshu C, Karczewski KJ, et al. (September 2011). "Phased whole-genome genetic risk in a family quartet using a major allele reference sequence". PLOS Genetics. 7 (9): e1002280. doi:10.1371/journal.pgen.1002280. PMC 3174201. PMID 21935354.
Dewey FE, Grove ME, Pan C, Goldstein BA, Bernstein JA, Chaib H, et al. (March 2014). "Clinical interpretation and implications of whole-genome sequencing". JAMA. 311 (10): 1035–1045. doi:10.1001/jama.2014.1717. PMC 4119063. PMID 24618965.
Bycroft, Clare; Freeman, Colin; Petkova, Desislava; Band, Gavin; Elliott, Lloyd T.; Sharp, Kevin; Motyer, Allan; Vukcevic, Damjan; Delaneau, Olivier; O'Connell, Jared; Cortes, Adrian; Welsh, Samantha; Young, Alan; Effingham, Mark; McVean, Gil (October 2018). "The UK Biobank resource with deep phenotyping and genomic data". Nature. 562 (7726): 203–209. Bibcode:2018Natur.562..203B. doi:10.1038/s41586-018-0579-z. ISSN 1476-4687. PMC 6786975. PMID 30305743.

nih.gov

"NIH-funded genome centers to accelerate precision medicine discoveries". National Institutes of Health: All of Us Research Program. National Institutes of Health. 25 September 2018.

nobelprize.org

Sanger F (1980). "Nobel lecture: Determination of nucleotide sequences in DNA" (PDF). Nobelprize.org. Retrieved 2010-10-18.

nytimes.com

Zimmer C (29 December 2009). "Scientists Start a Genomic Catalog of Earth's Abundant Microbes". The New York Times. ISSN 0362-4331. Retrieved 2012-12-21.

oed.com

"Genome, n". Oxford English Dictionary (Third ed.). Oxford University Press. 2008. Retrieved 2012-12-01.(subscription required)

pacb.com

"Home". PacBio.

semanticscholar.org

api.semanticscholar.org

Franklin RE, Gosling RG (April 1953). "Molecular configuration in sodium thymonucleate". Nature. 171 (4356): 740–1. Bibcode:1953Natur.171..740F. doi:10.1038/171740a0. PMID 13054694. S2CID 4268222.
Satzinger H (March 2008). "Theodor and Marcella Boveri: chromosomes and cytoplasm in heredity and development". Nature Reviews. Genetics. 9 (3): 231–238. doi:10.1038/nrg2311. PMID 18268510. S2CID 15829893.
Holley RW, Apgar J, Everett GA, Madison JT, Marquisee M, Merrill SH, et al. (March 1965). "Structure of a Ribonucleic Acid". Science. 147 (3664): 1462–1465. Bibcode:1965Sci...147.1462H. doi:10.1126/science.147.3664.1462. PMID 14263761. S2CID 40989800.
Min Jou W, Haegeman G, Ysebaert M, Fiers W (May 1972). "Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein". Nature. 237 (5350): 82–88. Bibcode:1972Natur.237...82J. doi:10.1038/237082a0. PMID 4555447. S2CID 4153893.
Fiers W, Contreras R, Duerinck F, Haegeman G, Iserentant D, Merregaert J, et al. (April 1976). "Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene". Nature. 260 (5551): 500–507. Bibcode:1976Natur.260..500F. doi:10.1038/260500a0. PMID 1264203. S2CID 4289674.
Fiers W, Contreras R, Haegemann G, Rogiers R, Van de Voorde A, Van Heuverswyn H, et al. (May 1978). "Complete nucleotide sequence of SV40 DNA". Nature. 273 (5658): 113–120. Bibcode:1978Natur.273..113F. doi:10.1038/273113a0. PMID 205802. S2CID 1634424.
Sanger F, Air GM, Barrell BG, Brown NL, Coulson AR, Fiddes CA, et al. (February 1977). "Nucleotide sequence of bacteriophage phi X174 DNA". Nature. 265 (5596): 687–695. Bibcode:1977Natur.265..687S. doi:10.1038/265687a0. PMID 870828. S2CID 4206886.
Anderson S, Bankier AT, Barrell BG, de Bruijn MH, Coulson AR, Drouin J, et al. (April 1981). "Sequence and organization of the human mitochondrial genome". Nature. 290 (5806): 457–465. Bibcode:1981Natur.290..457A. doi:10.1038/290457a0. PMID 7219534. S2CID 4355527.(subscription required)
Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, et al. (1986). "Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA". Nature. 322 (6079): 572–574. Bibcode:1986Natur.322..572O. doi:10.1038/322572a0. S2CID 4311952.
Oliver SG, van der Aart QJ, Agostoni-Carbone ML, Aigle M, Alberghina L, Alexandraki D, et al. (May 1992). "The complete DNA sequence of yeast chromosome III". Nature. 357 (6373): 38–46. Bibcode:1992Natur.357...38O. doi:10.1038/357038a0. PMID 1574125. S2CID 4271784.
Fleischmann RD, Adams MD, White O, Clayton RA, Kirkness EF, Kerlavage AR, et al. (July 1995). "Whole-genome random sequencing and assembly of Haemophilus influenzae Rd". Science. 269 (5223): 496–512. Bibcode:1995Sci...269..496F. doi:10.1126/science.7542800. PMID 7542800. S2CID 10423613.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, et al. (October 1996). "Life with 6000 genes". Science. 274 (5287): 546, 563–546, 567. Bibcode:1996Sci...274..546G. doi:10.1126/science.274.5287.546. PMID 8849441. S2CID 211123134.(subscription required)
Yue GH, Lo LC, Zhu ZY, Lin G, Feng F (April 2006). "The complete nucleotide sequence of the mitochondrial genome of Tetraodon nigroviridis". DNA Sequence. 17 (2): 115–121. doi:10.1080/10425170600700378. PMID 17076253. S2CID 21797344.
Church GM (January 2006). "Genomes for all". Scientific American. 294 (1): 46–54. Bibcode:2006SciAm.294a..46C. doi:10.1038/scientificamerican0106-46. PMID 16468433. S2CID 28769137.
Stein L (July 2001). "Genome annotation: from sequence to biology". Nature Reviews. Genetics. 2 (7): 493–503. doi:10.1038/35080529. PMID 11433356. S2CID 12044602.
Brent MR (January 2008). "Steady progress and recent breakthroughs in the accuracy of automated genome annotation" (PDF). Nature Reviews. Genetics. 9 (1): 62–73. doi:10.1038/nrg2220. PMID 18087260. S2CID 20412451. Archived from the original (PDF) on 2013-05-29. Retrieved 2013-01-04.
Brenner SE (October 2001). "A tour of structural genomics". Nature Reviews. Genetics. 2 (10): 801–809. doi:10.1038/35093574. PMID 11584296. S2CID 5656447.
Laird PW (March 2010). "Principles and challenges of genomewide DNA methylation analysis". Nature Reviews. Genetics. 11 (3): 191–203. doi:10.1038/nrg2732. PMID 20125086. S2CID 6780101.
Baker M (May 2011). "Synthetic genomes: The next step for the synthetic genome". Nature. 473 (7347): 403, 405–403, 408. Bibcode:2011Natur.473..403B. doi:10.1038/473403a. PMID 21593873. S2CID 205064528.
Luikart G, England PR, Tallmon D, Jordan S, Taberlet P (December 2003). "The power and promise of population genomics: from genotyping to genome typing". Nature Reviews. Genetics. 4 (12): 981–94. doi:10.1038/nrg1226. PMID 14631358. S2CID 8516357.
Allendorf FW, Hohenlohe PA, Luikart G (October 2010). "Genomics and the future of conservation genetics". Nature Reviews. Genetics. 11 (10): 697–709. doi:10.1038/nrg2844. PMID 20847747. S2CID 10811958.

stanford.edu

plato.stanford.edu

Darden L, Tabery J (2010). "Molecular Biology". In Zalta EN (ed.). The Stanford Encyclopedia of Philosophy (Fall 2010 ed.).

statnews.com

Robbins R (16 August 2019). "Top U.S. medical centers roll out DNA sequencing clinics for healthy (and often wealthy) clients". STAT News.

the-scientist.com

Scudellari M (1 October 2011). "Data Deluge". The Scientist. Retrieved 2013-01-04.

unam.mx

lcg.unam.mx

Mardis ER (2008). "Next-generation DNA sequencing methods" (PDF). Annual Review of Genomics and Human Genetics. 9: 387–402. doi:10.1146/annurev.genom.9.081307.164359. PMID 18576944. Archived from the original (PDF) on 2013-05-18. Retrieved 2013-01-04.

web.archive.org

"WHO definitions of genetics and genomics". World Health Organization. Archived from the original on June 30, 2004.
Illumina, Inc. (28 February 2012). An Introduction to Next-Generation Sequencing Technology (PDF). San Diego, California, USA: Illumina, Inc. p. 12. Archived from the original (PDF) on 2013-04-11. Retrieved 2012-12-28.
Mardis ER (2008). "Next-generation DNA sequencing methods" (PDF). Annual Review of Genomics and Human Genetics. 9: 387–402. doi:10.1146/annurev.genom.9.081307.164359. PMID 18576944. Archived from the original (PDF) on 2013-05-18. Retrieved 2013-01-04.
Davies K (2011). "Powering Preventative Medicine". Bio-IT World (September–October). Archived from the original on 2016-06-06. Retrieved 2014-12-17.
Brent MR (January 2008). "Steady progress and recent breakthroughs in the accuracy of automated genome annotation" (PDF). Nature Reviews. Genetics. 9 (1): 62–73. doi:10.1038/nrg2220. PMID 18087260. S2CID 20412451. Archived from the original (PDF) on 2013-05-29. Retrieved 2013-01-04.

who.int

"WHO definitions of genetics and genomics". World Health Organization. Archived from the original on June 30, 2004.

worldcat.org

search.worldcat.org

Zimmer C (29 December 2009). "Scientists Start a Genomic Catalog of Earth's Abundant Microbes". The New York Times. ISSN 0362-4331. Retrieved 2012-12-21.
Hotz RL (13 August 2012). "Here"s an Omical Tale: Scientists Discover Spreading Suffix". Wall Street Journal. ISSN 0099-9660. Retrieved 2013-01-04.
Bycroft, Clare; Freeman, Colin; Petkova, Desislava; Band, Gavin; Elliott, Lloyd T.; Sharp, Kevin; Motyer, Allan; Vukcevic, Damjan; Delaneau, Olivier; O'Connell, Jared; Cortes, Adrian; Welsh, Samantha; Young, Alan; Effingham, Mark; McVean, Gil (October 2018). "The UK Biobank resource with deep phenotyping and genomic data". Nature. 562 (7726): 203–209. Bibcode:2018Natur.562..203B. doi:10.1038/s41586-018-0579-z. ISSN 1476-4687. PMC 6786975. PMID 30305743.

wsj.com

Hotz RL (13 August 2012). "Here"s an Omical Tale: Scientists Discover Spreading Suffix". Wall Street Journal. ISSN 0099-9660. Retrieved 2013-01-04.