Human virome (English Wikipedia)

Zimmer, Carl (8 February 2013). "Your Inner Lions: Get to Know Your Virome". National Geographic. Archived from the original on February 10, 2013. Retrieved 29 April 2013.

nih.gov (Global: 5^th place; English: 5^th place)

pubmed.ncbi.nlm.nih.gov

Wylie, Kristine M.; Weinstock, George M.; Storch, Gregory A. (1 October 2012). "Emerging view of the human virome". Translational Research. 160 (4): 283–290. doi:10.1016/j.trsl.2012.03.006. PMC 3701101. PMID 22683423.
Williams, S. C. P. (6 February 2013). "The other microbiome". Proceedings of the National Academy of Sciences. 110 (8): 2682–2684. Bibcode:2013PNAS..110.2682W. doi:10.1073/pnas.1300923110. PMC 3581985. PMID 23388628.
Fontana, Judith M.; Alexander, Elizabeth; Salvatore, Mirella (2012). "Translational research in infectious disease: current paradigms and challenges ahead". Translational Research. 159 (6): 430–453. doi:10.1016/j.trsl.2011.12.009. PMC 3361696. PMID 22633095.
Pride, David T; Salzman, Julia; Haynes, Matthew; Rohwer, Forest; Davis-Long, Clara; White, Richard A; Loomer, Peter; Armitage, Gary C; Relman, David A (8 December 2011). "Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome". The ISME Journal. 6 (5): 915–926. doi:10.1038/ismej.2011.169. PMC 3329113. PMID 22158393.
Woolhouse, M.; Scott, F.; Hudson, Z.; Howey, R.; Chase-Topping, M. (10 September 2012). "Human viruses: discovery and emergence". Philosophical Transactions of the Royal Society B: Biological Sciences. 367 (1604): 2864–2871. doi:10.1098/rstb.2011.0354. PMC 3427559. PMID 22966141.
Delwart, Eric; Racaniello, Vincent (14 February 2013). "A Roadmap to the Human Virome". PLOS Pathogens. 9 (2) e1003146. doi:10.1371/journal.ppat.1003146. PMC 3573120. PMID 23457428.
Sender, R; Fuchs, S; Milo, R (January 2016). "Are We Really Vastly Outnumbered? Revisiting the Ratio of Bacterial to Host Cells in Humans". Cell. 164 (3): 337–40. Bibcode:2016Cell..164..337S. doi:10.1016/j.cell.2016.01.013. PMID 26824647.
Zheludev, Ivan N.; et al. (2024). "Viroid-like colonists of human microbiomes". Cell. 187 (23): 6521–6536.e18. bioRxiv 10.1101/2024.01.20.576352. doi:10.1016/j.cell.2024.09.033. PMC 11949080. PMID 39481381.
Thurber, Rebecca V; Haynes, Matthew; Breitbart, Mya; Wegley, Linda; Rohwer, Forest (2009). "Laboratory procedures to generate viral metagenomes". Nature Protocols. 4 (4): 470–483. doi:10.1038/nprot.2009.10. PMID 19300441. S2CID 205464352.
Allander, T. (6 September 2005). "From The Cover: Cloning of a human parvovirus by molecular screening of respiratory tract samples". Proceedings of the National Academy of Sciences. 102 (36): 12891–12896. Bibcode:2005PNAS..10212891A. doi:10.1073/pnas.0504666102. PMC 1200281. PMID 16118271.
Virgin, Herbert W.; Wherry, E. John; Ahmed, Rafi (1 July 2009). "Redefining Chronic Viral Infection". Cell. 138 (1): 30–50. doi:10.1016/j.cell.2009.06.036. PMID 19596234.
Kristensen, David M.; Mushegian, Arcady R.; Dolja, Valerian V.; Koonin, Eugene V. (2010). "New dimensions of the virus world discovered through metagenomics". Trends in Microbiology. 18 (1): 11–19. Bibcode:2010TrMic..18...11K. doi:10.1016/j.tim.2009.11.003. PMC 3293453. PMID 19942437.
Wylie, Kristine M.; Mihindukulasuriya, Kathie A.; Zhou, Yanjiao; Sodergren, Erica; Storch, Gregory A.; Weinstock, George M. (2014-01-01). "Metagenomic analysis of double-stranded DNA viruses in healthy adults". BMC Biology. 12 71. doi:10.1186/s12915-014-0071-7. ISSN 1741-7007. PMC 4177058. PMID 25212266.
Anderson, Norman G.; Gerin, John L.; Anderson, N. Leigh (1 July 2003). "Global Screening for Human Viral Pathogens". Emerging Infectious Diseases. 9 (7): 768–773. doi:10.3201/eid0907.030004. PMC 3023425. PMID 12890315.
Handley, SA, Thackray, LB, Zhao, G, Presti, R, Miller, AD, Droit, L, Abbink, P, Maxfield, LF, Kambal, A, Duan, E, Stanley, K, Kramer, J, Macri, SC, Permar, SR, Schmitz, JE, Mansfield, K, Brenchley, JM, Veazey, RS, Stappenbeck, TS, Wang, D, Barouch, DH, Virgin, HW (Oct 12, 2012). "Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome". Cell. 151 (2): 253–66. doi:10.1016/j.cell.2012.09.024. PMC 3490196. PMID 23063120.
Foxman, Ellen F.; Iwasaki, Akiko (1 April 2011). "Genome–virome interactions: examining the role of common viral infections in complex disease". Nature Reviews Microbiology. 9 (4): 254–264. doi:10.1038/nrmicro2541. PMC 3678363. PMID 21407242.
Pennisi, E. (24 March 2011). "Going Viral: Exploring the Role Of Viruses in Our Bodies". Science. 331 (6024): 1513. Bibcode:2011Sci...331.1513P. doi:10.1126/science.331.6024.1513. PMID 21436418.
Moustafa, Ahmed; Xie, Chao; Kirkness, Ewen; Biggs, William; Wong, Emily; Turpaz, Yaron; Bloom, Kenneth; Delwart, Eric; Nelson, Karen E. (2017-03-22). "The blood DNA virome in 8,000 humans". PLOS Pathogens. 13 (3) e1006292. doi:10.1371/journal.ppat.1006292. ISSN 1553-7374. PMC 5378407. PMID 28328962.
Koonin, Eugene V; Dolja, Valerian V; Krupovic, Mart (2021). "The healthy human virome: from virus–host symbiosis to disease". Current Opinion in Virology. 47: 86–94. doi:10.1016/j.coviro.2021.02.002. PMID 33652230. S2CID 232100996.
Butler, Christopher C (September 2013). "Asthma prevalence and humoral immune response in Somali immigrants in the US: implications for the hygiene hypothesis". Primary Care Respiratory Journal: Journal of the General Practice Airways Group. 22 (3): 262–264. doi:10.4104/pcrj.2013.00081. PMC 6442840. PMID 23959045.
Strachan, David P (June 10, 2014). "Siblings, Asthma, Rhinoconjunctivitis And Eczema: A Worldwide Perspective From The International Study Of Asthma And Allergies In Childhood". Clinical and Experimental Allergy. 45 (1): 126–136. doi:10.1111/cea.12349. PMC 4298795. PMID 24912652.
Daley, D (October 2014). "The evolution of the hygiene hypothesis: the role of early-life exposures to viruses and microbes and their relationship to asthma and allergic diseases". Current Opinion in Allergy and Clinical Immunology. 14 (5): 390–396. doi:10.1097/ACI.0000000000000101. PMID 25102107. S2CID 45420527.
Hannigan, Geoffrey D.; Meisel, Jacquelyn S.; Tyldsley, Amanda S.; Zheng, Qi; Hodkinson, Brendan P.; SanMiguel, Adam J.; Minot, Samuel; Bushman, Frederic D.; Grice, Elizabeth A. (2015-10-30). "The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome". mBio. 6 (5) e01578–15. doi:10.1128/mBio.01578-15. ISSN 2150-7511. PMC 4620475. PMID 26489866.
Grice, Elizabeth A.; Kong, Heidi H.; Conlan, Sean; Deming, Clayton B.; Davis, Joie; Young, Alice C.; Program, NISC Comparative Sequencing; Bouffard, Gerard G.; Blakesley, Robert W. (2009-05-29). "Topographical and Temporal Diversity of the Human Skin Microbiome". Science. 324 (5931): 1190–1192. Bibcode:2009Sci...324.1190G. doi:10.1126/science.1171700. ISSN 0036-8075. PMC 2805064. PMID 19478181.
Focà, Alfredo; Liberto, Maria Carla; Quirino, Angela; Marascio, Nadia; Zicca, Emilia; Pavia, Grazia (2015-01-01). "Gut Inflammation and Immunity: What Is the Role of the Human Gut Virome?". Mediators of Inflammation. 2015 326032. doi:10.1155/2015/326032. ISSN 0962-9351. PMC 4405218. PMID 25944980.
Minot, S.; Sinha, R.; Chen, J.; Li, H.; Keilbaugh, S. A.; Wu, G. D.; Lewis, J. D.; Bushman, F. D. (31 August 2011). "The human gut virome: Inter-individual variation and dynamic response to diet". Genome Research. 21 (10): 1616–1625. doi:10.1101/gr.122705.111. PMC 3202279. PMID 21880779.

ncbi.nlm.nih.gov

Wylie, Kristine M.; Weinstock, George M.; Storch, Gregory A. (1 October 2012). "Emerging view of the human virome". Translational Research. 160 (4): 283–290. doi:10.1016/j.trsl.2012.03.006. PMC 3701101. PMID 22683423.
Williams, S. C. P. (6 February 2013). "The other microbiome". Proceedings of the National Academy of Sciences. 110 (8): 2682–2684. Bibcode:2013PNAS..110.2682W. doi:10.1073/pnas.1300923110. PMC 3581985. PMID 23388628.
Fontana, Judith M.; Alexander, Elizabeth; Salvatore, Mirella (2012). "Translational research in infectious disease: current paradigms and challenges ahead". Translational Research. 159 (6): 430–453. doi:10.1016/j.trsl.2011.12.009. PMC 3361696. PMID 22633095.
Pride, David T; Salzman, Julia; Haynes, Matthew; Rohwer, Forest; Davis-Long, Clara; White, Richard A; Loomer, Peter; Armitage, Gary C; Relman, David A (8 December 2011). "Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome". The ISME Journal. 6 (5): 915–926. doi:10.1038/ismej.2011.169. PMC 3329113. PMID 22158393.
Woolhouse, M.; Scott, F.; Hudson, Z.; Howey, R.; Chase-Topping, M. (10 September 2012). "Human viruses: discovery and emergence". Philosophical Transactions of the Royal Society B: Biological Sciences. 367 (1604): 2864–2871. doi:10.1098/rstb.2011.0354. PMC 3427559. PMID 22966141.
Delwart, Eric; Racaniello, Vincent (14 February 2013). "A Roadmap to the Human Virome". PLOS Pathogens. 9 (2) e1003146. doi:10.1371/journal.ppat.1003146. PMC 3573120. PMID 23457428.
Zheludev, Ivan N.; et al. (2024). "Viroid-like colonists of human microbiomes". Cell. 187 (23): 6521–6536.e18. bioRxiv 10.1101/2024.01.20.576352. doi:10.1016/j.cell.2024.09.033. PMC 11949080. PMID 39481381.
Allander, T. (6 September 2005). "From The Cover: Cloning of a human parvovirus by molecular screening of respiratory tract samples". Proceedings of the National Academy of Sciences. 102 (36): 12891–12896. Bibcode:2005PNAS..10212891A. doi:10.1073/pnas.0504666102. PMC 1200281. PMID 16118271.
Kristensen, David M.; Mushegian, Arcady R.; Dolja, Valerian V.; Koonin, Eugene V. (2010). "New dimensions of the virus world discovered through metagenomics". Trends in Microbiology. 18 (1): 11–19. Bibcode:2010TrMic..18...11K. doi:10.1016/j.tim.2009.11.003. PMC 3293453. PMID 19942437.
Wylie, Kristine M.; Mihindukulasuriya, Kathie A.; Zhou, Yanjiao; Sodergren, Erica; Storch, Gregory A.; Weinstock, George M. (2014-01-01). "Metagenomic analysis of double-stranded DNA viruses in healthy adults". BMC Biology. 12 71. doi:10.1186/s12915-014-0071-7. ISSN 1741-7007. PMC 4177058. PMID 25212266.
Anderson, Norman G.; Gerin, John L.; Anderson, N. Leigh (1 July 2003). "Global Screening for Human Viral Pathogens". Emerging Infectious Diseases. 9 (7): 768–773. doi:10.3201/eid0907.030004. PMC 3023425. PMID 12890315.
Handley, SA, Thackray, LB, Zhao, G, Presti, R, Miller, AD, Droit, L, Abbink, P, Maxfield, LF, Kambal, A, Duan, E, Stanley, K, Kramer, J, Macri, SC, Permar, SR, Schmitz, JE, Mansfield, K, Brenchley, JM, Veazey, RS, Stappenbeck, TS, Wang, D, Barouch, DH, Virgin, HW (Oct 12, 2012). "Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome". Cell. 151 (2): 253–66. doi:10.1016/j.cell.2012.09.024. PMC 3490196. PMID 23063120.
Foxman, Ellen F.; Iwasaki, Akiko (1 April 2011). "Genome–virome interactions: examining the role of common viral infections in complex disease". Nature Reviews Microbiology. 9 (4): 254–264. doi:10.1038/nrmicro2541. PMC 3678363. PMID 21407242.
Moustafa, Ahmed; Xie, Chao; Kirkness, Ewen; Biggs, William; Wong, Emily; Turpaz, Yaron; Bloom, Kenneth; Delwart, Eric; Nelson, Karen E. (2017-03-22). "The blood DNA virome in 8,000 humans". PLOS Pathogens. 13 (3) e1006292. doi:10.1371/journal.ppat.1006292. ISSN 1553-7374. PMC 5378407. PMID 28328962.
Butler, Christopher C (September 2013). "Asthma prevalence and humoral immune response in Somali immigrants in the US: implications for the hygiene hypothesis". Primary Care Respiratory Journal: Journal of the General Practice Airways Group. 22 (3): 262–264. doi:10.4104/pcrj.2013.00081. PMC 6442840. PMID 23959045.
Strachan, David P (June 10, 2014). "Siblings, Asthma, Rhinoconjunctivitis And Eczema: A Worldwide Perspective From The International Study Of Asthma And Allergies In Childhood". Clinical and Experimental Allergy. 45 (1): 126–136. doi:10.1111/cea.12349. PMC 4298795. PMID 24912652.
Hannigan, Geoffrey D.; Meisel, Jacquelyn S.; Tyldsley, Amanda S.; Zheng, Qi; Hodkinson, Brendan P.; SanMiguel, Adam J.; Minot, Samuel; Bushman, Frederic D.; Grice, Elizabeth A. (2015-10-30). "The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome". mBio. 6 (5) e01578–15. doi:10.1128/mBio.01578-15. ISSN 2150-7511. PMC 4620475. PMID 26489866.
Grice, Elizabeth A.; Kong, Heidi H.; Conlan, Sean; Deming, Clayton B.; Davis, Joie; Young, Alice C.; Program, NISC Comparative Sequencing; Bouffard, Gerard G.; Blakesley, Robert W. (2009-05-29). "Topographical and Temporal Diversity of the Human Skin Microbiome". Science. 324 (5931): 1190–1192. Bibcode:2009Sci...324.1190G. doi:10.1126/science.1171700. ISSN 0036-8075. PMC 2805064. PMID 19478181.
Focà, Alfredo; Liberto, Maria Carla; Quirino, Angela; Marascio, Nadia; Zicca, Emilia; Pavia, Grazia (2015-01-01). "Gut Inflammation and Immunity: What Is the Role of the Human Gut Virome?". Mediators of Inflammation. 2015 326032. doi:10.1155/2015/326032. ISSN 0962-9351. PMC 4405218. PMID 25944980.
Minot, S.; Sinha, R.; Chen, J.; Li, H.; Keilbaugh, S. A.; Wu, G. D.; Lewis, J. D.; Bushman, F. D. (31 August 2011). "The human gut virome: Inter-individual variation and dynamic response to diet". Genome Research. 21 (10): 1616–1625. doi:10.1101/gr.122705.111. PMC 3202279. PMID 21880779.

sciencealert.com (Global: 6,647^th place; English: 5,633^rd place)

Koumoundouros, Tessa (29 January 2024). "'Obelisks': Entirely New Class of Life Has Been Found in The Human Digestive System". ScienceAlert. Archived from the original on 29 January 2024. Retrieved 29 January 2024.

sciencedirect.com (Global: 137^th place; English: 146^th place)

Koonin, Eugene V; Dolja, Valerian V; Krupovic, Mart (2021). "The healthy human virome: from virus–host symbiosis to disease". Current Opinion in Virology. 47: 86–94. doi:10.1016/j.coviro.2021.02.002. PMID 33652230. S2CID 232100996.

semanticscholar.org (Global: 15^th place; English: 8^th place)

api.semanticscholar.org

Thurber, Rebecca V; Haynes, Matthew; Breitbart, Mya; Wegley, Linda; Rohwer, Forest (2009). "Laboratory procedures to generate viral metagenomes". Nature Protocols. 4 (4): 470–483. doi:10.1038/nprot.2009.10. PMID 19300441. S2CID 205464352.
Koonin, Eugene V; Dolja, Valerian V; Krupovic, Mart (2021). "The healthy human virome: from virus–host symbiosis to disease". Current Opinion in Virology. 47: 86–94. doi:10.1016/j.coviro.2021.02.002. PMID 33652230. S2CID 232100996.
Daley, D (October 2014). "The evolution of the hygiene hypothesis: the role of early-life exposures to viruses and microbes and their relationship to asthma and allergic diseases". Current Opinion in Allergy and Clinical Immunology. 14 (5): 390–396. doi:10.1097/ACI.0000000000000101. PMID 25102107. S2CID 45420527.

web.archive.org (Global: 1^st place; English: 1^st place)

Zimmer, Carl (8 February 2013). "Your Inner Lions: Get to Know Your Virome". National Geographic. Archived from the original on February 10, 2013. Retrieved 29 April 2013.
Koumoundouros, Tessa (29 January 2024). "'Obelisks': Entirely New Class of Life Has Been Found in The Human Digestive System". ScienceAlert. Archived from the original on 29 January 2024. Retrieved 29 January 2024.

worldcat.org (Global: 4^th place; English: 4^th place)

search.worldcat.org

Wylie, Kristine M.; Mihindukulasuriya, Kathie A.; Zhou, Yanjiao; Sodergren, Erica; Storch, Gregory A.; Weinstock, George M. (2014-01-01). "Metagenomic analysis of double-stranded DNA viruses in healthy adults". BMC Biology. 12 71. doi:10.1186/s12915-014-0071-7. ISSN 1741-7007. PMC 4177058. PMID 25212266.
Moustafa, Ahmed; Xie, Chao; Kirkness, Ewen; Biggs, William; Wong, Emily; Turpaz, Yaron; Bloom, Kenneth; Delwart, Eric; Nelson, Karen E. (2017-03-22). "The blood DNA virome in 8,000 humans". PLOS Pathogens. 13 (3) e1006292. doi:10.1371/journal.ppat.1006292. ISSN 1553-7374. PMC 5378407. PMID 28328962.
Hannigan, Geoffrey D.; Meisel, Jacquelyn S.; Tyldsley, Amanda S.; Zheng, Qi; Hodkinson, Brendan P.; SanMiguel, Adam J.; Minot, Samuel; Bushman, Frederic D.; Grice, Elizabeth A. (2015-10-30). "The Human Skin Double-Stranded DNA Virome: Topographical and Temporal Diversity, Genetic Enrichment, and Dynamic Associations with the Host Microbiome". mBio. 6 (5) e01578–15. doi:10.1128/mBio.01578-15. ISSN 2150-7511. PMC 4620475. PMID 26489866.
Grice, Elizabeth A.; Kong, Heidi H.; Conlan, Sean; Deming, Clayton B.; Davis, Joie; Young, Alice C.; Program, NISC Comparative Sequencing; Bouffard, Gerard G.; Blakesley, Robert W. (2009-05-29). "Topographical and Temporal Diversity of the Human Skin Microbiome". Science. 324 (5931): 1190–1192. Bibcode:2009Sci...324.1190G. doi:10.1126/science.1171700. ISSN 0036-8075. PMC 2805064. PMID 19478181.
Focà, Alfredo; Liberto, Maria Carla; Quirino, Angela; Marascio, Nadia; Zicca, Emilia; Pavia, Grazia (2015-01-01). "Gut Inflammation and Immunity: What Is the Role of the Human Gut Virome?". Mediators of Inflammation. 2015 326032. doi:10.1155/2015/326032. ISSN 0962-9351. PMC 4405218. PMID 25944980.

Human virome (English Wikipedia)

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ncbi.nlm.nih.gov

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