References analysis of the Wikipedia article "Introduction to viruses" in the English version

archives-ouvertes.fr

hal-pasteur.archives-ouvertes.fr

hal-cea.archives-ouvertes.fr

doi.org

King AM, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert ML, Rubino L, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Davison AJ (September 2018). "Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee Taxonomy of Viruses (2018)" (PDF). Archives of Virology. 163 (9): 2601. doi:10.1007/s00705-018-3847-1. PMID 29754305. S2CID 21670772.

D'Herelle F (2007). "On an invisible microbe antagonistic toward dysenteric bacilli: brief note by Mr. F. D'Herelle, presented by Mr. Roux. 1917". Research in Microbiology. 158 (7): 553–554. doi:10.1016/j.resmic.2007.07.005. PMID 17855060.

Stanley WM, Loring HS (1936). "The isolation of crystalline tobacco mosaic virus protein from diseased tomato plants". Science. 83 (2143): 85. Bibcode:1936Sci....83...85S. doi:10.1126/science.83.2143.85. PMID 17756690.

Stanley WM, Lauffer MA (1939). "Disintegration of tobacco mosaic virus in urea solutions". Science. 89 (2311): 345–347. Bibcode:1939Sci....89..345S. doi:10.1126/science.89.2311.345. PMID 17788438.

Creager AN, Morgan GJ (June 2008). "After the double helix: Rosalind Franklin's research on Tobacco mosaic virus". Isis; an International Review Devoted to the History of Science and Its Cultural Influences. 99 (2): 239–272. doi:10.1086/588626. PMID 18702397. S2CID 25741967.

Goodpasture EW, Woodruff AM, Buddingh GJ (October 1931). "The Cultivation Of Vaccine and other Viruses In The Chorioallantoic Membrane of Chick Embryos". Science. 74 (1919): 371–372. Bibcode:1931Sci....74..371G. doi:10.1126/science.74.1919.371. PMID 17810781.

Rosen FS (October 2004). "Isolation of poliovirus – John Enders and the Nobel Prize". N. Engl. J. Med. 351 (15): 1481–1483. doi:10.1056/NEJMp048202. PMID 15470207.

Liu Y, Nickle DC, Shriner D, Jensen MA, Learn GH, Mittler JE, Mullins JI (November 2004). "Molecular clock-like evolution of human immunodeficiency virus type 1". Virology. 329 (1): 101–108. doi:10.1016/j.virol.2004.08.014. PMID 15476878.

Krupovic M, Dooja W, Koonin EV (2019). "Origin of viruses: primordial replicators recruiting capsids from hosts" (PDF). Nature Reviews Microbiology. 17 (7): 449–458. doi:10.1038/s41579-019-0205-6. PMID 31142823. S2CID 169035711.

Nasir A, Kim KM, Caetano-Anollés G (2012). "Viral evolution: Primordial cellular origins and late adaptation to parasitism". Mobile Genetic Elements. 2 (5): 247–252. doi:10.4161/mge.22797. PMC 3575434. PMID 23550145.

Rotter ML (August 2001). "Arguments for alcoholic hand disinfection". The Journal of Hospital Infection. 48 (Suppl A): S4–S8. doi:10.1016/s0195-6701(01)90004-0. PMID 11759024.

Abergel C, Legendre M, Claverie JM (November 2015). "The rapidly expanding universe of giant viruses: Mimivirus, Pandoravirus, Pithovirus and Mollivirus". FEMS Microbiol. Rev. 39 (6): 779–796. doi:10.1093/femsre/fuv037. PMID 26391910.

Philippe N, Legendre M, Doutre G, Couté Y, Poirot O, Lescot M, Arslan D, Seltzer V, Bertaux L, Bruley C, Garin J, Claverie JM, Abergel C (July 2013). "Pandoraviruses: amoeba viruses with genomes up to 2.5 Mb reaching that of parasitic eukaryotes" (PDF). Science. 341 (6143): 281–286. Bibcode:2013Sci...341..281P. doi:10.1126/science.1239181. PMID 23869018. S2CID 16877147.

International Human GS (2004). "Finishing the euchromatic sequence of the human genome". Nature. 431 (7011): 931–945. Bibcode:2004Natur.431..931H. doi:10.1038/nature03001. PMID 15496913. S2CID 186242248.

de Klerk E, 't Hoen PA (March 2015). "Alternative mRNA transcription, processing, and translation: insights from RNA sequencing". Trends in Genetics. 31 (3): 128–139. doi:10.1016/j.tig.2015.01.001. PMID 25648499.

Okamoto T, Suzuki T, Kusakabe S, Tokunaga M, Hirano J, Miyata Y, Matsuura Y (2017). "Regulation of Apoptosis during Flavivirus Infection". Viruses. 9 (9): 243. doi:10.3390/v9090243. PMC 5618009. PMID 28846635.

Alwine JC (2008). "Modulation of host cell stress responses by human cytomegalovirus". Current Topics in Microbiology and Immunology. 325: 263–79. doi:10.1007/978-3-540-77349-8_15. PMID 18637511.

Sinclair J (March 2008). "Human cytomegalovirus: Latency and reactivation in the myeloid lineage". J. Clin. Virol. 41 (3): 180–185. doi:10.1016/j.jcv.2007.11.014. PMID 18164651.

Jordan MC, Jordan GW, Stevens JG, Miller G (June 1984). "Latent herpesviruses of humans". Ann. Intern. Med. 100 (6): 866–880. doi:10.7326/0003-4819-100-6-866. PMID 6326635.

Sissons JG, Bain M, Wills MR (February 2002). "Latency and reactivation of human cytomegalovirus". J. Infect. 44 (2): 73–77. doi:10.1053/jinf.2001.0948. PMID 12076064. S2CID 24879226.

Barozzi P, Potenza L, Riva G, Vallerini D, Quadrelli C, Bosco R, Forghieri F, Torelli G, Luppi M (December 2007). "B cells and herpesviruses: a model of lymphoproliferation". Autoimmun Rev. 7 (2): 132–136. doi:10.1016/j.autrev.2007.02.018. PMID 18035323.

Graham SV (2017). "The human papillomavirus replication cycle, and its links to cancer progression: a comprehensive review". Clinical Science. 131 (17): 2201–2221. doi:10.1042/CS20160786. PMID 28798073.

Roulston A, Marcellus RC, Branton PE (1999). "Viruses and apoptosis". Annu. Rev. Microbiol. 53: 577–628. doi:10.1146/annurev.micro.53.1.577. PMID 10547702.

Berngruber TW, Froissart R, Choisy M, Gandon S (2013). "Evolution of Virulence in Emerging Epidemics". PLOS Pathogens. 9 (3): e1003209. doi:10.1371/journal.ppat.1003209. PMC 3597519. PMID 23516359.

Tanaka J, Akita T, Ko K, Miura Y, Satake M (September 2019). "Countermeasures against viral hepatitis B and C in Japan: An epidemiological point of view". Hepatology Research. 49 (9): 990–1002. doi:10.1111/hepr.13417. PMC 6852166. PMID 31364248.

Lai CC, Liu YH, Wang CY, Wang YH, Hsueh SC, Yen MY, Ko WC, Hsueh PR (March 2020). "Asymptomatic carrier state, acute respiratory disease, and pneumonia due to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2): Facts and myths". Journal of Microbiology, Immunology, and Infection = Wei Mian Yu Gan Ran Za Zhi. 53 (3): 404–412. doi:10.1016/j.jmii.2020.02.012. PMC 7128959. PMID 32173241.

Strand LK (July 2018). "The Terrible Summer of 1952 … When Polio Struck Our Family". Seminars in Pediatric Neurology. 26: 39–44. doi:10.1016/j.spen.2017.04.001. PMID 29961515. S2CID 49640682.

Moorthy M, Castronovo D, Abraham A, Bhattacharyya S, Gradus S, Gorski J, Naumov YN, Fefferman NH, Naumova EN (October 2012). "Deviations in influenza seasonality: odd coincidence or obscure consequence?". Clinical Microbiology and Infection. 18 (10): 955–962. doi:10.1111/j.1469-0691.2012.03959.x. PMC 3442949. PMID 22958213.

Barril PA, Fumian TM, Prez VE, Gil PI, Martínez LC, Giordano MO, Masachessi G, Isa MB, Ferreyra LJ, Ré VE, Miagostovich M, Pavan JV, Nates SV (April 2015). "Rotavirus seasonality in urban sewage from Argentina: effect of meteorological variables on the viral load and the genetic diversity". Environmental Research. 138: 409–415. Bibcode:2015ER....138..409B. doi:10.1016/j.envres.2015.03.004. hdl:11336/61497. PMID 25777068.

Durrheim DN, Crowcroft NS, Strebel PM (December 2014). "Measles – The epidemiology of elimination". Vaccine. 32 (51): 6880–6883. doi:10.1016/j.vaccine.2014.10.061. hdl:1959.13/1299149. PMID 25444814.

Mbanzulu KM, Mboera LE, Luzolo FK, Wumba R, Misinzo G, Kimera SI (February 2020). "Mosquito-borne viral diseases in the Democratic Republic of the Congo: a review". Parasites & Vectors. 13 (1): 103. doi:10.1186/s13071-020-3985-7. PMC 7045448. PMID 32103776.

Ashour HM, Elkhatib WF, Rahman MM, Elshabrawy HA (March 2020). "Insights into the Recent 2019 Novel Coronavirus (SARS-CoV-2) in Light of Past Human Coronavirus Outbreaks". Pathogens (Basel, Switzerland). 9 (3): 186. doi:10.3390/pathogens9030186. PMC 7157630. PMID 32143502.

Eisinger RW, Fauci AS (March 2018). "Ending the HIV/AIDS Pandemic1". Emerging Infectious Diseases. 24 (3): 413–416. doi:10.3201/eid2403.171797. PMC 5823353. PMID 29460740.

Qin Y, Zhao MJ, Tan YY, Li XQ, Zheng JD, Peng ZB, Feng LZ (August 2018). "[History of influenza pandemics in China during the past century]". Zhonghua Liu Xing Bing Xue Za Zhi = Zhonghua Liuxingbingxue Zazhi (in Chinese). 39 (8): 1028–1031. doi:10.3760/cma.j.issn.0254-6450.2018.08.003. PMID 30180422.

Nishiyama Y, Matsukuma S, Matsumura T, Kanatani Y, Saito T (April 2015). "Preparedness for a smallpox pandemic in Japan: public health perspectives". Disaster Medicine and Public Health Preparedness. 9 (2): 220–223. doi:10.1017/dmp.2014.157. PMID 26060873. S2CID 37149836.

Houghton F (2019). "Geography, global pandemics & air travel: Faster, fuller, further & more frequent". Journal of Infection and Public Health. 12 (3): 448–449. doi:10.1016/j.jiph.2019.02.020. PMC 7129534. PMID 30878442.

Weiss SR, Leibowitz JL (2011). Coronavirus pathogenesis. Advances in Virus Research. Vol. 81. pp. 85–164. doi:10.1016/B978-0-12-385885-6.00009-2. ISBN 978-0-12-385885-6. PMC 7149603. PMID 22094080.

Wong AT, Chen H, Liu SH, Hsu EK, Luk KS, Lai CK, Chan RF, Tsang OT, Choi KW, Kwan YW, Tong AY, Cheng VC, Tsang DC (May 2017). "From SARS to Avian Influenza Preparedness in Hong Kong". Clinical Infectious Diseases. 64 (suppl_2): S98–S104. doi:10.1093/cid/cix123. PMID 28475794.

Deng SQ, Peng HJ (February 2020). "Characteristics of and Public Health Responses to the Coronavirus Disease 2019 Outbreak in China". Journal of Clinical Medicine. 9 (2): 575. doi:10.3390/jcm9020575. PMC 7074453. PMID 32093211.

Han Q, Lin Q, Jin S, You L (February 2020). "Coronavirus 2019-nCoV: A brief perspective from the front line". The Journal of Infection. 80 (4): 373–377. doi:10.1016/j.jinf.2020.02.010. PMC 7102581. PMID 32109444.

Garcia-Ruiz H (2018). "Susceptibility Genes to Plant Viruses". Viruses. 10 (9): 484. doi:10.3390/v10090484. PMC 6164914. PMID 30201857.

Soosaar JL, Burch-Smith TM, Dinesh-Kumar SP (2005). "Mechanisms of plant resistance to viruses". Nature Reviews Microbiology. 3 (10): 789–798. doi:10.1038/nrmicro1239. PMID 16132037. S2CID 27311732.

Horvath P, Barrangou R (January 2010). "CRISPR/Cas, the immune system of bacteria and archaea" (PDF). Science. 327 (5962): 167–170. Bibcode:2010Sci...327..167H. doi:10.1126/science.1179555. PMID 20056882. S2CID 17960960. Archived from the original (PDF) on 27 March 2020.

Small JC, Ertl HC (2011). "Viruses – from pathogens to vaccine carriers". Current Opinion in Virology. 1 (4): 241–245. doi:10.1016/j.coviro.2011.07.009. PMC 3190199. PMID 22003377.

Burakova Y, Madera R, McVey S, Schlup JR, Shi J (2018). "Adjuvants for Animal Vaccines". Viral Immunology. 31 (1): 11–22. doi:10.1089/vim.2017.0049. PMID 28618246.

Falade-Nwulia O, Suarez-Cuervo C, Nelson DR, Fried MW, Segal JB, Sulkowski MS (May 2017). "Oral Direct-Acting Agent Therapy for Hepatitis C Virus Infection: A Systematic Review". Annals of Internal Medicine. 166 (9): 637–648. doi:10.7326/M16-2575. PMC 5486987. PMID 28319996.

Paul N, Han SH (June 2011). "Combination Therapy for Chronic Hepatitis B: Current Indications". Curr Hepat Rep. 10 (2): 98–105. doi:10.1007/s11901-011-0095-1. PMC 3085106. PMID 21654909.

Koonin EV, Senkevich TG, Dolja VV (September 2006). "The ancient Virus World and evolution of cells". Biol. Direct. 1: 29. doi:10.1186/1745-6150-1-29. PMC 1594570. PMID 16984643.

Dávila-Ramos S, Castelán-Sánchez HG, Martínez-Ávila L, Sánchez-Carbente MD, Peralta R, Hernández-Mendoza A, Dobson AD, Gonzalez RA, Pastor N, Batista-García RA (2019). "A Review on Viral Metagenomics in Extreme Environments". Frontiers in Microbiology. 10: 2403. doi:10.3389/fmicb.2019.02403. PMC 6842933. PMID 31749771.

Breitbart M, Bonnain C, Malki K, Sawaya NA (July 2018). "Phage puppet masters of the marine microbial realm". Nature Microbiology. 3 (7): 754–766. doi:10.1038/s41564-018-0166-y. PMID 29867096. S2CID 46927784.

Suttle CA (September 2005). "Viruses in the sea". Nature. 437 (7057): 356–361. Bibcode:2005Natur.437..356S. doi:10.1038/nature04160. PMID 16163346. S2CID 4370363.

Suttle CA (October 2007). "Marine viruses – major players in the global ecosystem". Nat. Rev. Microbiol. 5 (10): 801–812. doi:10.1038/nrmicro1750. PMID 17853907. S2CID 4658457.

Hall A, Jepson P, Goodman S, Harkonen T (2006). "Phocine distemper virus in the North and European Seas – Data and models, nature and nurture". Biological Conservation. 131 (2): 221–229. Bibcode:2006BCons.131..221H. doi:10.1016/j.biocon.2006.04.008.

DeLong JP, Van Etten JL, Al-Ameeli Z, Agarkova IV, Dunigan DD (3 January 2023). "The consumption of viruses returns energy to food chains". Proceedings of the National Academy of Sciences. 120 (1): e2215000120. Bibcode:2023PNAS..12015000D. doi:10.1073/pnas.2215000120. ISSN 0027-8424. PMC 9910503. PMID 36574690.

handle.net

hdl.handle.net

harvard.edu

ui.adsabs.harvard.edu

Suttle CA (September 2005). "Viruses in the sea". Nature. 437 (7057): 356–361. Bibcode:2005Natur.437..356S. doi:10.1038/nature04160. PMID 16163346. S2CID 4370363.

nih.gov

pubmed.ncbi.nlm.nih.gov

Rosen FS (October 2004). "Isolation of poliovirus – John Enders and the Nobel Prize". N. Engl. J. Med. 351 (15): 1481–1483. doi:10.1056/NEJMp048202. PMID 15470207.

Rotter ML (August 2001). "Arguments for alcoholic hand disinfection". The Journal of Hospital Infection. 48 (Suppl A): S4–S8. doi:10.1016/s0195-6701(01)90004-0. PMID 11759024.

Sinclair J (March 2008). "Human cytomegalovirus: Latency and reactivation in the myeloid lineage". J. Clin. Virol. 41 (3): 180–185. doi:10.1016/j.jcv.2007.11.014. PMID 18164651.

Jordan MC, Jordan GW, Stevens JG, Miller G (June 1984). "Latent herpesviruses of humans". Ann. Intern. Med. 100 (6): 866–880. doi:10.7326/0003-4819-100-6-866. PMID 6326635.

Sissons JG, Bain M, Wills MR (February 2002). "Latency and reactivation of human cytomegalovirus". J. Infect. 44 (2): 73–77. doi:10.1053/jinf.2001.0948. PMID 12076064. S2CID 24879226.

Roulston A, Marcellus RC, Branton PE (1999). "Viruses and apoptosis". Annu. Rev. Microbiol. 53: 577–628. doi:10.1146/annurev.micro.53.1.577. PMID 10547702.

Berngruber TW, Froissart R, Choisy M, Gandon S (2013). "Evolution of Virulence in Emerging Epidemics". PLOS Pathogens. 9 (3): e1003209. doi:10.1371/journal.ppat.1003209. PMC 3597519. PMID 23516359.

Strand LK (July 2018). "The Terrible Summer of 1952 … When Polio Struck Our Family". Seminars in Pediatric Neurology. 26: 39–44. doi:10.1016/j.spen.2017.04.001. PMID 29961515. S2CID 49640682.

Eisinger RW, Fauci AS (March 2018). "Ending the HIV/AIDS Pandemic1". Emerging Infectious Diseases. 24 (3): 413–416. doi:10.3201/eid2403.171797. PMC 5823353. PMID 29460740.

Garcia-Ruiz H (2018). "Susceptibility Genes to Plant Viruses". Viruses. 10 (9): 484. doi:10.3390/v10090484. PMC 6164914. PMID 30201857.

Small JC, Ertl HC (2011). "Viruses – from pathogens to vaccine carriers". Current Opinion in Virology. 1 (4): 241–245. doi:10.1016/j.coviro.2011.07.009. PMC 3190199. PMID 22003377.

Burakova Y, Madera R, McVey S, Schlup JR, Shi J (2018). "Adjuvants for Animal Vaccines". Viral Immunology. 31 (1): 11–22. doi:10.1089/vim.2017.0049. PMID 28618246.

Thomssen R (1975). "Live attenuated versus killed virus vaccines". Monographs in Allergy. 9: 155–176. PMID 1090805.

Paul N, Han SH (June 2011). "Combination Therapy for Chronic Hepatitis B: Current Indications". Curr Hepat Rep. 10 (2): 98–105. doi:10.1007/s11901-011-0095-1. PMC 3085106. PMID 21654909.

Koonin EV, Senkevich TG, Dolja VV (September 2006). "The ancient Virus World and evolution of cells". Biol. Direct. 1: 29. doi:10.1186/1745-6150-1-29. PMC 1594570. PMID 16984643.

Suttle CA (September 2005). "Viruses in the sea". Nature. 437 (7057): 356–361. Bibcode:2005Natur.437..356S. doi:10.1038/nature04160. PMID 16163346. S2CID 4370363.

Suttle CA (October 2007). "Marine viruses – major players in the global ecosystem". Nat. Rev. Microbiol. 5 (10): 801–812. doi:10.1038/nrmicro1750. PMID 17853907. S2CID 4658457.

ncbi.nlm.nih.gov

semanticscholar.org

api.semanticscholar.org

Sissons JG, Bain M, Wills MR (February 2002). "Latency and reactivation of human cytomegalovirus". J. Infect. 44 (2): 73–77. doi:10.1053/jinf.2001.0948. PMID 12076064. S2CID 24879226.

Strand LK (July 2018). "The Terrible Summer of 1952 … When Polio Struck Our Family". Seminars in Pediatric Neurology. 26: 39–44. doi:10.1016/j.spen.2017.04.001. PMID 29961515. S2CID 49640682.

Suttle CA (September 2005). "Viruses in the sea". Nature. 437 (7057): 356–361. Bibcode:2005Natur.437..356S. doi:10.1038/nature04160. PMID 16163346. S2CID 4370363.

Suttle CA (October 2007). "Marine viruses – major players in the global ecosystem". Nat. Rev. Microbiol. 5 (10): 801–812. doi:10.1038/nrmicro1750. PMID 17853907. S2CID 4658457.

pdfs.semanticscholar.org

Introduction to viruses (English Wikipedia)

archives-ouvertes.fr

hal-pasteur.archives-ouvertes.fr

hal-cea.archives-ouvertes.fr

biomedcentral.com

virologyj.biomedcentral.com

cdc.gov

doi.org

handle.net

hdl.handle.net

harvard.edu

ui.adsabs.harvard.edu

nature.com

microbiologycommunity.nature.com

newatlas.com

nih.gov

pubmed.ncbi.nlm.nih.gov

ncbi.nlm.nih.gov

nytimes.com

semanticscholar.org

api.semanticscholar.org

pdfs.semanticscholar.org

umn.edu

cidrap.umn.edu

web.archive.org

who.int

worldcat.org