Lead Finder (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Lead Finder" in English language version.

refsWebsite

Global rank English rank

12doi.org

2^nd place

10nih.gov

4^th place

3semanticscholar.org

11^th place

8^th place

3psu.edu

207^th place

136^th place

1biomoltech.com

low place

1worldcat.org

5^th place

1harvard.edu

18^th place

17^th place

biomoltech.com

"Benchmarking Lead Finder's Performance in Virtual Screening". www.biomoltech.com. Retrieved 2023-11-12.

doi.org

Stroganov O (2008). "Lead Finder: An Approach To Improve Accuracy of Protein−Ligand Docking, Binding Energy Estimation, and Virtual Screening". J. Chem. Inf. Model. 48 (12): 2371–2385. doi:10.1021/ci800166p. PMID 19007114.
Novikov, Fedor N.; Stroylov, Viktor S.; Zeifman, Alexey A.; Stroganov, Oleg V.; Kulkov, Val; Chilov, Ghermes G. (2012-05-09). "Lead Finder docking and virtual screening evaluation with Astex and DUD test sets". Journal of Computer-Aided Molecular Design. 26 (6): 725–735. doi:10.1007/s10822-012-9549-y. ISSN 0920-654X.
M. Rarey; B. Kramer; T. Lengauer (1997). "Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention". J Comp Aid Mol Des. 11 (4): 369–384. Bibcode:1997JCAMD..11..369R. doi:10.1023/A:1007913026166. PMID 9334903. S2CID 5987558.
R. A. Friesner; R. B. Murphy; M. P. Repasky; L. L. Frye; J. R. Greenwood; T. A. Halgren; P. C. Sanschagrin; D. T. Mainz (2004). "Glide: A New Approach for Rapid, Accurate Docking and Scoring. 1. Method and Assessment of Docking Accuracy". Journal of Medicinal Chemistry. 47 (7): 1739–1749. doi:10.1021/jm0306430. PMID 15027865.
R. A. Friesner; J. L. Banks; R. B. Murphy; T. A. Halgren; J. J. Klicic; D. T. Mainz; M. P. Repasky; E. H. Knoll; M. Shelley; J. K. Perry; D. E. Shaw; P. Francis; P. S. Shenkin (2006). "Glide: extra Precision Glide: Docking and Scoring incorporating a Model of Hydrophobic Enclosure for Protein-Ligand Complexes". Journal of Medicinal Chemistry. 49 (21): 6177–6196. CiteSeerX 10.1.1.619.3600. doi:10.1021/jm051256o. PMID 17034125. S2CID 6369255.
G. Jones; P. Willett; R. C. Glen; A. R. Leach; R. Taylor (1997). "Development and Validation of a Genetic Algorithm for Flexible Docking". J Mol Biol. 267 (3): 727–748. CiteSeerX 10.1.1.130.3377. doi:10.1006/jmbi.1996.0897. PMID 9126849.
M. J. Hartshorn; M. L. Verdonk; G. Chessari; S. C. Brewerton; W.T..M. Mooij; P. N. Mortenson; C. W. Murray (2007). "Diverse, High-Quality Test Set for the Validation of Protein-Ligand Docking Performance". Journal of Medicinal Chemistry. 50 (4): 726–741. doi:10.1021/jm061277y. PMID 17300160.
J.W.M. Nissink; C. Murray; M. Hartshorn; M. L. Verdonk; J. C. Cole; R. Taylor (2002). "A New Test Set for Validating Predictions of Protein-Ligand Interaction". Proteins: Structure, Function, and Genetics. 49 (4): 457–471. doi:10.1002/prot.10232. PMID 12402356. S2CID 37136109.
C. M. Venkatachalam; X. Jiang; T. Oldfield; M. Waldman (2003). "LigandFit: a novel method for the shape-directed rapid docking of ligands to protein active sites". J Mol Graph Model. 21 (4): 289–307. doi:10.1016/s1093-3263(02)00164-x. PMID 12479928.
R. Thomsen; M. H. Christensen (2006). "MolDock: A new technique for high-accuracy molecular docking". Journal of Medicinal Chemistry. 49 (11): 3315–3321. CiteSeerX 10.1.1.116.2126. doi:10.1021/jm051197e. PMID 16722650.
A. N. Jain (2003). "Surflex: Fully Automatic Flexible Molecular Docking Using a Molecular Similarity-Based Search Engine". Journal of Medicinal Chemistry. 46 (4): 499–511. doi:10.1021/jm020406h. PMID 12570372.

dx.doi.org

Novikov, Fedor N.; Stroylov, Viktor S.; Zeifman, Alexey A.; Stroganov, Oleg V.; Kulkov, Val; Chilov, Ghermes G. (2012-05-09). "Lead Finder docking and virtual screening evaluation with Astex and DUD test sets". Journal of Computer-Aided Molecular Design. 26 (6): 725–735. doi:10.1007/s10822-012-9549-y. ISSN 0920-654X.

harvard.edu

ui.adsabs.harvard.edu

M. Rarey; B. Kramer; T. Lengauer (1997). "Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention". J Comp Aid Mol Des. 11 (4): 369–384. Bibcode:1997JCAMD..11..369R. doi:10.1023/A:1007913026166. PMID 9334903. S2CID 5987558.

nih.gov

pubmed.ncbi.nlm.nih.gov

Stroganov O (2008). "Lead Finder: An Approach To Improve Accuracy of Protein−Ligand Docking, Binding Energy Estimation, and Virtual Screening". J. Chem. Inf. Model. 48 (12): 2371–2385. doi:10.1021/ci800166p. PMID 19007114.
M. Rarey; B. Kramer; T. Lengauer (1997). "Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention". J Comp Aid Mol Des. 11 (4): 369–384. Bibcode:1997JCAMD..11..369R. doi:10.1023/A:1007913026166. PMID 9334903. S2CID 5987558.
R. A. Friesner; R. B. Murphy; M. P. Repasky; L. L. Frye; J. R. Greenwood; T. A. Halgren; P. C. Sanschagrin; D. T. Mainz (2004). "Glide: A New Approach for Rapid, Accurate Docking and Scoring. 1. Method and Assessment of Docking Accuracy". Journal of Medicinal Chemistry. 47 (7): 1739–1749. doi:10.1021/jm0306430. PMID 15027865.
R. A. Friesner; J. L. Banks; R. B. Murphy; T. A. Halgren; J. J. Klicic; D. T. Mainz; M. P. Repasky; E. H. Knoll; M. Shelley; J. K. Perry; D. E. Shaw; P. Francis; P. S. Shenkin (2006). "Glide: extra Precision Glide: Docking and Scoring incorporating a Model of Hydrophobic Enclosure for Protein-Ligand Complexes". Journal of Medicinal Chemistry. 49 (21): 6177–6196. CiteSeerX 10.1.1.619.3600. doi:10.1021/jm051256o. PMID 17034125. S2CID 6369255.
G. Jones; P. Willett; R. C. Glen; A. R. Leach; R. Taylor (1997). "Development and Validation of a Genetic Algorithm for Flexible Docking". J Mol Biol. 267 (3): 727–748. CiteSeerX 10.1.1.130.3377. doi:10.1006/jmbi.1996.0897. PMID 9126849.
M. J. Hartshorn; M. L. Verdonk; G. Chessari; S. C. Brewerton; W.T..M. Mooij; P. N. Mortenson; C. W. Murray (2007). "Diverse, High-Quality Test Set for the Validation of Protein-Ligand Docking Performance". Journal of Medicinal Chemistry. 50 (4): 726–741. doi:10.1021/jm061277y. PMID 17300160.
J.W.M. Nissink; C. Murray; M. Hartshorn; M. L. Verdonk; J. C. Cole; R. Taylor (2002). "A New Test Set for Validating Predictions of Protein-Ligand Interaction". Proteins: Structure, Function, and Genetics. 49 (4): 457–471. doi:10.1002/prot.10232. PMID 12402356. S2CID 37136109.
C. M. Venkatachalam; X. Jiang; T. Oldfield; M. Waldman (2003). "LigandFit: a novel method for the shape-directed rapid docking of ligands to protein active sites". J Mol Graph Model. 21 (4): 289–307. doi:10.1016/s1093-3263(02)00164-x. PMID 12479928.
R. Thomsen; M. H. Christensen (2006). "MolDock: A new technique for high-accuracy molecular docking". Journal of Medicinal Chemistry. 49 (11): 3315–3321. CiteSeerX 10.1.1.116.2126. doi:10.1021/jm051197e. PMID 16722650.
A. N. Jain (2003). "Surflex: Fully Automatic Flexible Molecular Docking Using a Molecular Similarity-Based Search Engine". Journal of Medicinal Chemistry. 46 (4): 499–511. doi:10.1021/jm020406h. PMID 12570372.

psu.edu

citeseerx.ist.psu.edu

R. A. Friesner; J. L. Banks; R. B. Murphy; T. A. Halgren; J. J. Klicic; D. T. Mainz; M. P. Repasky; E. H. Knoll; M. Shelley; J. K. Perry; D. E. Shaw; P. Francis; P. S. Shenkin (2006). "Glide: extra Precision Glide: Docking and Scoring incorporating a Model of Hydrophobic Enclosure for Protein-Ligand Complexes". Journal of Medicinal Chemistry. 49 (21): 6177–6196. CiteSeerX 10.1.1.619.3600. doi:10.1021/jm051256o. PMID 17034125. S2CID 6369255.
G. Jones; P. Willett; R. C. Glen; A. R. Leach; R. Taylor (1997). "Development and Validation of a Genetic Algorithm for Flexible Docking". J Mol Biol. 267 (3): 727–748. CiteSeerX 10.1.1.130.3377. doi:10.1006/jmbi.1996.0897. PMID 9126849.
R. Thomsen; M. H. Christensen (2006). "MolDock: A new technique for high-accuracy molecular docking". Journal of Medicinal Chemistry. 49 (11): 3315–3321. CiteSeerX 10.1.1.116.2126. doi:10.1021/jm051197e. PMID 16722650.

semanticscholar.org

api.semanticscholar.org

M. Rarey; B. Kramer; T. Lengauer (1997). "Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention". J Comp Aid Mol Des. 11 (4): 369–384. Bibcode:1997JCAMD..11..369R. doi:10.1023/A:1007913026166. PMID 9334903. S2CID 5987558.
R. A. Friesner; J. L. Banks; R. B. Murphy; T. A. Halgren; J. J. Klicic; D. T. Mainz; M. P. Repasky; E. H. Knoll; M. Shelley; J. K. Perry; D. E. Shaw; P. Francis; P. S. Shenkin (2006). "Glide: extra Precision Glide: Docking and Scoring incorporating a Model of Hydrophobic Enclosure for Protein-Ligand Complexes". Journal of Medicinal Chemistry. 49 (21): 6177–6196. CiteSeerX 10.1.1.619.3600. doi:10.1021/jm051256o. PMID 17034125. S2CID 6369255.
J.W.M. Nissink; C. Murray; M. Hartshorn; M. L. Verdonk; J. C. Cole; R. Taylor (2002). "A New Test Set for Validating Predictions of Protein-Ligand Interaction". Proteins: Structure, Function, and Genetics. 49 (4): 457–471. doi:10.1002/prot.10232. PMID 12402356. S2CID 37136109.

worldcat.org

search.worldcat.org

Novikov, Fedor N.; Stroylov, Viktor S.; Zeifman, Alexey A.; Stroganov, Oleg V.; Kulkov, Val; Chilov, Ghermes G. (2012-05-09). "Lead Finder docking and virtual screening evaluation with Astex and DUD test sets". Journal of Computer-Aided Molecular Design. 26 (6): 725–735. doi:10.1007/s10822-012-9549-y. ISSN 0920-654X.