Malate synthase (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Malate synthase" in English language version.

refsWebsite

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32nih.gov

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23doi.org

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2rcsb.org

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1archive.org

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1worldcat.org

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1harvard.edu

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1semanticscholar.org

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archive.org

Stryer L, Berg JM, Tymoczko JL (2003). Biochemistry (fifth ed.). New York: Freeman. ISBN 978-0-7167-4684-3. OCLC 48055706.

doi.org

PDB: 5T8G; Huang HL, Krieger IV, Parai MK, Gawandi VB, Sacchettini JC (December 2016). "Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange". The Journal of Biological Chemistry. 291 (53): 27421–32. doi:10.1074/jbc.m116.750877. PMC 5207166. PMID 27738104.
Smith CV, Huang CC, Miczak A, Russell DG, Sacchettini JC, Höner zu Bentrup K (January 2003). "Biochemical and structural studies of malate synthase from Mycobacterium tuberculosis". The Journal of Biological Chemistry. 278 (3): 1735–43. doi:10.1074/jbc.M209248200. PMID 12393860.
Durchschlag H, Biedermann G, Eggerer H (February 1981). "Large-scale purification and some properties of malate synthase from baker's yeast". European Journal of Biochemistry. 114 (2): 255–62. doi:10.1111/j.1432-1033.1981.tb05144.x. PMID 7011808.
Anstrom DM, Kallio K, Remington SJ (September 2003). "Structure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 A resolution". Protein Science. 12 (9): 1822–32. doi:10.1110/ps.03174303. PMC 2323980. PMID 12930982.
Serrano JA, Bonete MJ (August 2001). "Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1520 (2): 154–62. doi:10.1016/s0167-4781(01)00263-9. PMID 11513957.
Howard BR, Endrizzi JA, Remington SJ (March 2000). "Crystal structure of Escherichia coli malate synthase G complexed with magnesium and glyoxylate at 2.0 A resolution: mechanistic implications". Biochemistry. 39 (11): 3156–68. doi:10.1021/bi992519h. PMID 10715138.
Clark JD, O'Keefe SJ, Knowles JR (August 1988). "Malate synthase: proof of a stepwise Claisen condensation using the double-isotope fractionation test". Biochemistry. 27 (16): 5961–71. doi:10.1021/bi00416a020. PMID 2847778.
Kornberg HL, Sadler JR (December 1961). "The metabolism of C2-compounds in micro-organisms. VIII. A dicarboxylic acid cycle as a route for the oxidation of glycollate by Escherichia coli". The Biochemical Journal. 81 (3): 503–13. doi:10.1042/bj0810503. PMC 1243371. PMID 14458448.
Nakazawa M (2017). "C2 metabolism in Euglena". Euglena: Biochemistry, Cell and Molecular Biology. Advances in Experimental Medicine and Biology. Vol. 979. pp. 39–45. doi:10.1007/978-3-319-54910-1_3. ISBN 978-3-319-54908-8. PMID 28429316.
Cioni M, Pinzauti G, Vanni P (1981). "Comparative biochemistry of the glyoxylate cycle". Comparative Biochemistry and Physiology B. 70: 1–26. doi:10.1016/0305-0491(81)90118-8.
Schnarrenberger C, Martin W (February 2002). "Evolution of the enzymes of the citric acid cycle and the glyoxylate cycle of higher plants. A case study of endosymbiotic gene transfer". European Journal of Biochemistry. 269 (3): 868–83. doi:10.1046/j.0014-2956.2001.02722.x. PMID 11846788.
Strittmatter L, Li Y, Nakatsuka NJ, Calvo SE, Grabarek Z, Mootha VK (May 2014). "CLYBL is a polymorphic human enzyme with malate synthase and β-methylmalate synthase activity". Human Molecular Genetics. 23 (9): 2313–23. doi:10.1093/hmg/ddt624. PMC 3976331. PMID 24334609.
Shen H, Campanello GC, Flicker D, Grabarek Z, Hu J, Luo C, Banerjee R, Mootha VK (November 2017). "The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12". Cell. 171 (4): 771–782.e11. doi:10.1016/j.cell.2017.09.051. PMC 5827971. PMID 29056341.
Reid MA, Paik J, Locasale JW (November 2017). "A Missing Link to Vitamin B12 Metabolism". Cell. 171 (4): 736–737. doi:10.1016/j.cell.2017.10.030. PMID 29100069.
Dunn MF, Ramírez-Trujillo JA, Hernández-Lucas I (October 2009). "Major roles of isocitrate lyase and malate synthase in bacterial and fungal pathogenesis". Microbiology. 155 (Pt 10): 3166–75. doi:10.1099/mic.0.030858-0. PMID 19684068.
Höner Zu Bentrup K, Miczak A, Swenson DL, Russell DG (December 1999). "Characterization of activity and expression of isocitrate lyase in Mycobacterium avium and Mycobacterium tuberculosis". Journal of Bacteriology. 181 (23): 7161–7. doi:10.1128/JB.181.23.7161-7167.1999. PMC 103675. PMID 10572116.
Quartararo CE, Blanchard JS (August 2011). "Kinetic and chemical mechanism of malate synthase from Mycobacterium tuberculosis". Biochemistry. 50 (32): 6879–87. doi:10.1021/bi2007299. PMC 3153559. PMID 21728344.
Puckett S, Trujillo C, Wang Z, Eoh H, Ioerger TR, Krieger I, Sacchettini J, Schnappinger D, Rhee KY, Ehrt S (March 2017). "Glyoxylate detoxification is an essential function of malate synthase required for carbon assimilation in Mycobacterium tuberculosis". Proceedings of the National Academy of Sciences of the United States of America. 114 (11): E2225–E2232. Bibcode:2017PNAS..114E2225P. doi:10.1073/pnas.1617655114. PMC 5358392. PMID 28265055.
Singh KS, Sharma R, Keshari D, Singh N, Singh SK (September 2017). "Down-regulation of malate synthase in Mycobacterium tuberculosis H37Ra leads to reduced stress tolerance, persistence and survival in macrophages". Tuberculosis. 106: 73–81. doi:10.1016/j.tube.2017.07.006. PMID 28802408. S2CID 38331939.
May EE, Leitão A, Tropsha A, Oprea TI (December 2013). "A systems chemical biology study of malate synthase and isocitrate lyase inhibition in Mycobacterium tuberculosis during active and NRP growth". Computational Biology and Chemistry. 47: 167–80. doi:10.1016/j.compbiolchem.2013.07.002. PMC 4010430. PMID 24121675.
McVey AC, Medarametla P, Chee X, Bartlett S, Poso A, Spring DR, Rahman T, Welch M (October 2017). "Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen Pseudomonas aeruginosa". Biochemistry. 56 (41): 5539–5549. doi:10.1021/acs.biochem.7b00852. PMID 28985053.
Adi PJ, Yellapu NK, Matcha B (December 2016). "Modeling, molecular docking, probing catalytic binding mode of acetyl-CoA malate synthase G in Brucella melitensis 16M". Biochemistry and Biophysics Reports. 8: 192–199. doi:10.1016/j.bbrep.2016.08.020. PMC 5613768. PMID 28955956.
Cortay JC, Bleicher F, Duclos B, Cenatiempo Y, Gautier C, Prato JL, Cozzone AJ (September 1989). "Utilization of acetate in Escherichia coli: structural organization and differential expression of the ace operon". Biochimie. 71 (9–10): 1043–9. doi:10.1016/0300-9084(89)90109-0. PMID 2512996.

harvard.edu

ui.adsabs.harvard.edu

Puckett S, Trujillo C, Wang Z, Eoh H, Ioerger TR, Krieger I, Sacchettini J, Schnappinger D, Rhee KY, Ehrt S (March 2017). "Glyoxylate detoxification is an essential function of malate synthase required for carbon assimilation in Mycobacterium tuberculosis". Proceedings of the National Academy of Sciences of the United States of America. 114 (11): E2225–E2232. Bibcode:2017PNAS..114E2225P. doi:10.1073/pnas.1617655114. PMC 5358392. PMID 28265055.

nih.gov

pubmed.ncbi.nlm.nih.gov

PDB: 5T8G; Huang HL, Krieger IV, Parai MK, Gawandi VB, Sacchettini JC (December 2016). "Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange". The Journal of Biological Chemistry. 291 (53): 27421–32. doi:10.1074/jbc.m116.750877. PMC 5207166. PMID 27738104.
Smith CV, Huang CC, Miczak A, Russell DG, Sacchettini JC, Höner zu Bentrup K (January 2003). "Biochemical and structural studies of malate synthase from Mycobacterium tuberculosis". The Journal of Biological Chemistry. 278 (3): 1735–43. doi:10.1074/jbc.M209248200. PMID 12393860.
Durchschlag H, Biedermann G, Eggerer H (February 1981). "Large-scale purification and some properties of malate synthase from baker's yeast". European Journal of Biochemistry. 114 (2): 255–62. doi:10.1111/j.1432-1033.1981.tb05144.x. PMID 7011808.
Anstrom DM, Kallio K, Remington SJ (September 2003). "Structure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 A resolution". Protein Science. 12 (9): 1822–32. doi:10.1110/ps.03174303. PMC 2323980. PMID 12930982.
Serrano JA, Bonete MJ (August 2001). "Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1520 (2): 154–62. doi:10.1016/s0167-4781(01)00263-9. PMID 11513957.
Howard BR, Endrizzi JA, Remington SJ (March 2000). "Crystal structure of Escherichia coli malate synthase G complexed with magnesium and glyoxylate at 2.0 A resolution: mechanistic implications". Biochemistry. 39 (11): 3156–68. doi:10.1021/bi992519h. PMID 10715138.
Clark JD, O'Keefe SJ, Knowles JR (August 1988). "Malate synthase: proof of a stepwise Claisen condensation using the double-isotope fractionation test". Biochemistry. 27 (16): 5961–71. doi:10.1021/bi00416a020. PMID 2847778.
Kornberg HL, Sadler JR (December 1961). "The metabolism of C2-compounds in micro-organisms. VIII. A dicarboxylic acid cycle as a route for the oxidation of glycollate by Escherichia coli". The Biochemical Journal. 81 (3): 503–13. doi:10.1042/bj0810503. PMC 1243371. PMID 14458448.
Nakazawa M (2017). "C2 metabolism in Euglena". Euglena: Biochemistry, Cell and Molecular Biology. Advances in Experimental Medicine and Biology. Vol. 979. pp. 39–45. doi:10.1007/978-3-319-54910-1_3. ISBN 978-3-319-54908-8. PMID 28429316.
Schnarrenberger C, Martin W (February 2002). "Evolution of the enzymes of the citric acid cycle and the glyoxylate cycle of higher plants. A case study of endosymbiotic gene transfer". European Journal of Biochemistry. 269 (3): 868–83. doi:10.1046/j.0014-2956.2001.02722.x. PMID 11846788.
Strittmatter L, Li Y, Nakatsuka NJ, Calvo SE, Grabarek Z, Mootha VK (May 2014). "CLYBL is a polymorphic human enzyme with malate synthase and β-methylmalate synthase activity". Human Molecular Genetics. 23 (9): 2313–23. doi:10.1093/hmg/ddt624. PMC 3976331. PMID 24334609.
Shen H, Campanello GC, Flicker D, Grabarek Z, Hu J, Luo C, Banerjee R, Mootha VK (November 2017). "The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12". Cell. 171 (4): 771–782.e11. doi:10.1016/j.cell.2017.09.051. PMC 5827971. PMID 29056341.
Reid MA, Paik J, Locasale JW (November 2017). "A Missing Link to Vitamin B12 Metabolism". Cell. 171 (4): 736–737. doi:10.1016/j.cell.2017.10.030. PMID 29100069.
Dunn MF, Ramírez-Trujillo JA, Hernández-Lucas I (October 2009). "Major roles of isocitrate lyase and malate synthase in bacterial and fungal pathogenesis". Microbiology. 155 (Pt 10): 3166–75. doi:10.1099/mic.0.030858-0. PMID 19684068.
Höner Zu Bentrup K, Miczak A, Swenson DL, Russell DG (December 1999). "Characterization of activity and expression of isocitrate lyase in Mycobacterium avium and Mycobacterium tuberculosis". Journal of Bacteriology. 181 (23): 7161–7. doi:10.1128/JB.181.23.7161-7167.1999. PMC 103675. PMID 10572116.
Quartararo CE, Blanchard JS (August 2011). "Kinetic and chemical mechanism of malate synthase from Mycobacterium tuberculosis". Biochemistry. 50 (32): 6879–87. doi:10.1021/bi2007299. PMC 3153559. PMID 21728344.
Puckett S, Trujillo C, Wang Z, Eoh H, Ioerger TR, Krieger I, Sacchettini J, Schnappinger D, Rhee KY, Ehrt S (March 2017). "Glyoxylate detoxification is an essential function of malate synthase required for carbon assimilation in Mycobacterium tuberculosis". Proceedings of the National Academy of Sciences of the United States of America. 114 (11): E2225–E2232. Bibcode:2017PNAS..114E2225P. doi:10.1073/pnas.1617655114. PMC 5358392. PMID 28265055.
Singh KS, Sharma R, Keshari D, Singh N, Singh SK (September 2017). "Down-regulation of malate synthase in Mycobacterium tuberculosis H37Ra leads to reduced stress tolerance, persistence and survival in macrophages". Tuberculosis. 106: 73–81. doi:10.1016/j.tube.2017.07.006. PMID 28802408. S2CID 38331939.
May EE, Leitão A, Tropsha A, Oprea TI (December 2013). "A systems chemical biology study of malate synthase and isocitrate lyase inhibition in Mycobacterium tuberculosis during active and NRP growth". Computational Biology and Chemistry. 47: 167–80. doi:10.1016/j.compbiolchem.2013.07.002. PMC 4010430. PMID 24121675.
McVey AC, Medarametla P, Chee X, Bartlett S, Poso A, Spring DR, Rahman T, Welch M (October 2017). "Structural and Functional Characterization of Malate Synthase G from Opportunistic Pathogen Pseudomonas aeruginosa". Biochemistry. 56 (41): 5539–5549. doi:10.1021/acs.biochem.7b00852. PMID 28985053.
Adi PJ, Yellapu NK, Matcha B (December 2016). "Modeling, molecular docking, probing catalytic binding mode of acetyl-CoA malate synthase G in Brucella melitensis 16M". Biochemistry and Biophysics Reports. 8: 192–199. doi:10.1016/j.bbrep.2016.08.020. PMC 5613768. PMID 28955956.
Cortay JC, Bleicher F, Duclos B, Cenatiempo Y, Gautier C, Prato JL, Cozzone AJ (September 1989). "Utilization of acetate in Escherichia coli: structural organization and differential expression of the ace operon". Biochimie. 71 (9–10): 1043–9. doi:10.1016/0300-9084(89)90109-0. PMID 2512996.

ncbi.nlm.nih.gov

PDB: 5T8G; Huang HL, Krieger IV, Parai MK, Gawandi VB, Sacchettini JC (December 2016). "Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange". The Journal of Biological Chemistry. 291 (53): 27421–32. doi:10.1074/jbc.m116.750877. PMC 5207166. PMID 27738104.
Anstrom DM, Kallio K, Remington SJ (September 2003). "Structure of the Escherichia coli malate synthase G:pyruvate:acetyl-coenzyme A abortive ternary complex at 1.95 A resolution". Protein Science. 12 (9): 1822–32. doi:10.1110/ps.03174303. PMC 2323980. PMID 12930982.
Kornberg HL, Sadler JR (December 1961). "The metabolism of C2-compounds in micro-organisms. VIII. A dicarboxylic acid cycle as a route for the oxidation of glycollate by Escherichia coli". The Biochemical Journal. 81 (3): 503–13. doi:10.1042/bj0810503. PMC 1243371. PMID 14458448.
Strittmatter L, Li Y, Nakatsuka NJ, Calvo SE, Grabarek Z, Mootha VK (May 2014). "CLYBL is a polymorphic human enzyme with malate synthase and β-methylmalate synthase activity". Human Molecular Genetics. 23 (9): 2313–23. doi:10.1093/hmg/ddt624. PMC 3976331. PMID 24334609.
Shen H, Campanello GC, Flicker D, Grabarek Z, Hu J, Luo C, Banerjee R, Mootha VK (November 2017). "The Human Knockout Gene CLYBL Connects Itaconate to Vitamin B12". Cell. 171 (4): 771–782.e11. doi:10.1016/j.cell.2017.09.051. PMC 5827971. PMID 29056341.
Höner Zu Bentrup K, Miczak A, Swenson DL, Russell DG (December 1999). "Characterization of activity and expression of isocitrate lyase in Mycobacterium avium and Mycobacterium tuberculosis". Journal of Bacteriology. 181 (23): 7161–7. doi:10.1128/JB.181.23.7161-7167.1999. PMC 103675. PMID 10572116.
Quartararo CE, Blanchard JS (August 2011). "Kinetic and chemical mechanism of malate synthase from Mycobacterium tuberculosis". Biochemistry. 50 (32): 6879–87. doi:10.1021/bi2007299. PMC 3153559. PMID 21728344.
Puckett S, Trujillo C, Wang Z, Eoh H, Ioerger TR, Krieger I, Sacchettini J, Schnappinger D, Rhee KY, Ehrt S (March 2017). "Glyoxylate detoxification is an essential function of malate synthase required for carbon assimilation in Mycobacterium tuberculosis". Proceedings of the National Academy of Sciences of the United States of America. 114 (11): E2225–E2232. Bibcode:2017PNAS..114E2225P. doi:10.1073/pnas.1617655114. PMC 5358392. PMID 28265055.
May EE, Leitão A, Tropsha A, Oprea TI (December 2013). "A systems chemical biology study of malate synthase and isocitrate lyase inhibition in Mycobacterium tuberculosis during active and NRP growth". Computational Biology and Chemistry. 47: 167–80. doi:10.1016/j.compbiolchem.2013.07.002. PMC 4010430. PMID 24121675.
Adi PJ, Yellapu NK, Matcha B (December 2016). "Modeling, molecular docking, probing catalytic binding mode of acetyl-CoA malate synthase G in Brucella melitensis 16M". Biochemistry and Biophysics Reports. 8: 192–199. doi:10.1016/j.bbrep.2016.08.020. PMC 5613768. PMID 28955956.

rcsb.org

PDB: 5T8G; Huang HL, Krieger IV, Parai MK, Gawandi VB, Sacchettini JC (December 2016). "Mycobacterium tuberculosis Malate Synthase Structures with Fragments Reveal a Portal for Substrate/Product Exchange". The Journal of Biological Chemistry. 291 (53): 27421–32. doi:10.1074/jbc.m116.750877. PMC 5207166. PMID 27738104.
Bank, RCSB Protein Data. "RCSB PDB: Homepage". www.rcsb.org. Retrieved 2018-03-05.

semanticscholar.org

api.semanticscholar.org

Singh KS, Sharma R, Keshari D, Singh N, Singh SK (September 2017). "Down-regulation of malate synthase in Mycobacterium tuberculosis H37Ra leads to reduced stress tolerance, persistence and survival in macrophages". Tuberculosis. 106: 73–81. doi:10.1016/j.tube.2017.07.006. PMID 28802408. S2CID 38331939.

worldcat.org

search.worldcat.org

Stryer L, Berg JM, Tymoczko JL (2003). Biochemistry (fifth ed.). New York: Freeman. ISBN 978-0-7167-4684-3. OCLC 48055706.