Molecular evolution (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Molecular evolution" in English language version.

refsWebsite

Global rank English rank

55nih.gov

4^th place

38doi.org

2^nd place

13harvard.edu

18^th place

17^th place

12semanticscholar.org

11^th place

8^th place

1zenodo.org

621^st place

380^th place

1singerinstruments.com

low place

1handle.net

102^nd place

76^th place

1mun.ca

6,450^th place

4,032^nd place

1archive.org

6^th place

1cam.ac.uk

670^th place

480^th place

1worldcat.org

5^th place

archive.org

Gerardus J. H. Grubben (2004). Vegetables. PROTA. p. 404. ISBN 978-90-5782-147-9. Retrieved 10 March 2013.

cam.ac.uk

repository.cam.ac.uk

Brunet TD, Doolittle WF (19 March 2018). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.

doi.org

Dietrich MR (1998). "Paradox and persuasion: negotiating the place of molecular evolution within evolutionary biology". Journal of the History of Biology. 31 (1): 85–111. doi:10.1023/A:1004257523100. PMID 11619919. S2CID 29935487.
Hagen JB (1999). "Naturalists, molecular biologists, and the challenges of molecular evolution". Journal of the History of Biology. 32 (2): 321–341. doi:10.1023/A:1004660202226. PMID 11624208. S2CID 26994015.
Zuckerkandl, Emile; Pauling, Linus (March 1965). "Molecules as documents of evolutionary history". Journal of Theoretical Biology. 8 (2): 357–366. Bibcode:1965JThBi...8..357Z. doi:10.1016/0022-5193(65)90083-4. PMID 5876245.
Kimura M (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–626. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King JL, Jukes TH (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–798. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Fay JC, Wu CI (2003). "Sequence divergence, functional constraint, and selection in protein evolution". Annual Review of Genomics and Human Genetics. 4: 213–235. doi:10.1146/annurev.genom.4.020303.162528. PMID 14527302. S2CID 6360375.
Álvarez-Carretero, Sandra; Kapli, Paschalia; Yang, Ziheng (4 April 2023). "Beginner's Guide on the Use of PAML to Detect Positive Selection". Molecular Biology and Evolution. 40 (4). doi:10.1093/molbev/msad041. PMC 10127084. PMID 37096789.
Hanukoglu I (February 2017). "ASIC and ENaC type sodium channels: conformational states and the structures of the ion selectivity filters". The FEBS Journal. 284 (4): 525–545. doi:10.1111/febs.13840. PMID 27580245. S2CID 24402104.
Hanukoglu I, Hanukoglu A (April 2016). "Epithelial sodium channel (ENaC) family: Phylogeny, structure-function, tissue distribution, and associated inherited diseases". Gene. 579 (2): 95–132. doi:10.1016/j.gene.2015.12.061. PMC 4756657. PMID 26772908.
Burnim AA, Spence MA, Xu D, Jackson CJ, Ando N (September 2022). Ben-Tal N, Weigel D, Ben-Tal N, Stubbe J, Hofer A (eds.). "Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade". eLife. 11: e79790. doi:10.7554/eLife.79790. PMC 9531940. PMID 36047668.
Bhattacharya S, Margheritis EG, Takahashi K, Kulesha A, D'Souza A, Kim I, et al. (October 2022). "NMR-guided directed evolution". Nature. 610 (7931): 389–393. Bibcode:2022Natur.610..389B. doi:10.1038/s41586-022-05278-9. PMC 10116341. PMID 36198791. S2CID 245067145.
Wang, Yiguan; Obbard, Darren J (19 July 2023). "Experimental estimates of germline mutation rate in eukaryotes: a phylogenetic meta-analysis". Evolution Letters. 7 (4): 216–226. doi:10.1093/evlett/qrad027. hdl:20.500.11820/8ffd5b76-77ae-4764-ae31-de2fb8aa35cf. PMC 10355183. PMID 37475753.
Peck, Kayla M.; Lauring, Adam S. (15 July 2018). "Complexities of Viral Mutation Rates". Journal of Virology. 92 (14): e01031-17. doi:10.1128/JVI.01031-17. PMC 6026756. PMID 29720522.
J. L. Weber and C. Wong (1993). "Mutation of human short tandem repeats". Hum Mol Genet. 2 (8): 1123–8. doi:10.1093/hmg/2.8.1123. PMID 8401493.
A. V. Cano and J. L. Payne (2020). "Mutation bias interacts with composition bias to influence adaptive evolution". PLOS Computational Biology. 16 (9): e1008296. Bibcode:2020PLSCB..16E8296C. doi:10.1371/journal.pcbi.1008296. PMC 7571706. PMID 32986712.
E. Freese (1962). "On the Evolution of the Base Composition of DNA". J. Theor. Biol. 3 (1): 82–101. Bibcode:1962JThBi...3...82F. doi:10.1016/S0022-5193(62)80005-8. It is unimportant in this connection whether selection has been negligible or self-cancelling.
N. Sueoka (1962). "On the Genetic Basis of Variation and Heterogeneity of DNA Base Composition". Proc. Natl. Acad. Sci. U.S.A. 48 (4): 582–592. Bibcode:1962PNAS...48..582S. doi:10.1073/pnas.48.4.582. PMC 220819. PMID 13918161.
A. Stoltzfus and L. Y. Yampolsky (2009). "Climbing mount probable: mutation as a cause of nonrandomness in evolution". J Hered. 100 (5): 637–47. doi:10.1093/jhered/esp048. PMID 19625453.
Hershberg R, Petrov DA (December 2008). "Selection on codon bias". Annual Review of Genetics. 42 (1): 287–299. doi:10.1146/annurev.genet.42.110807.091442. PMID 18983258. S2CID 7085012.
Duret L, Galtier N (2009). "Biased gene conversion and the evolution of mammalian genomic landscapes". Annual Review of Genomics and Human Genetics. 10: 285–311. doi:10.1146/annurev-genom-082908-150001. PMID 19630562.
Galtier N, Piganeau G, Mouchiroud D, Duret L (October 2001). "GC-content evolution in mammalian genomes: the biased gene conversion hypothesis". Genetics. 159 (2): 907–911. doi:10.1093/genetics/159.2.907. PMC 1461818. PMID 11693127.
Organ CL, Shedlock AM, Meade A, Pagel M, Edwards SV (March 2007). "Origin of avian genome size and structure in non-avian dinosaurs". Nature. 446 (7132): 180–184. Bibcode:2007Natur.446..180O. doi:10.1038/nature05621. PMID 17344851. S2CID 3031794.
Crosland MW, Crozier RH (March 1986). "Myrmecia pilosula, an Ant with Only One Pair of Chromosomes". Science. 231 (4743): 1278. Bibcode:1986Sci...231.1278C. doi:10.1126/science.231.4743.1278. PMID 17839565. S2CID 25465053.
Pardo-Manuel de Villena, Fernando; Sapienza, Carmen (April 2001). "Recombination is proportional to the number of chromosome arms in mammals". Mammalian Genome. 12 (4): 318–322. doi:10.1007/s003350020005. PMID 11309665.
Kandul NP, Lukhtanov VA, Pierce NE (March 2007). "Karyotypic diversity and speciation in Agrodiaetus butterflies". Evolution; International Journal of Organic Evolution. 61 (3): 546–559. doi:10.1111/j.1558-5646.2007.00046.x. PMID 17348919.
McLysaght A, Guerzoni D (September 2015). "New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370 (1678): 20140332. doi:10.1098/rstb.2014.0332. PMC 4571571. PMID 26323763.
Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ (June 2006). "Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression". Proceedings of the National Academy of Sciences of the United States of America. 103 (26): 9935–9939. Bibcode:2006PNAS..103.9935L. doi:10.1073/pnas.0509809103. PMC 1502557. PMID 16777968.
Zhou Q, Zhang G, Zhang Y, Xu S, Zhao R, Zhan Z, et al. (September 2008). "On the origin of new genes in Drosophila". Genome Research. 18 (9): 1446–1455. doi:10.1101/gr.076588.108. PMC 2527705. PMID 18550802.
Cai J, Zhao R, Jiang H, Wang W (May 2008). "De novo origination of a new protein-coding gene in Saccharomyces cerevisiae". Genetics. 179 (1): 487–496. doi:10.1534/genetics.107.084491. PMC 2390625. PMID 18493065.
Xiao W, Liu H, Li Y, Li X, Xu C, Long M, Wang S (2009). El-Shemy HA (ed.). "A rice gene of de novo origin negatively regulates pathogen-induced defense response". PLOS ONE. 4 (2): e4603. Bibcode:2009PLoSO...4.4603X. doi:10.1371/journal.pone.0004603. PMC 2643483. PMID 19240804.
Knowles DG, McLysaght A (October 2009). "Recent de novo origin of human protein-coding genes". Genome Research. 19 (10): 1752–1759. doi:10.1101/gr.095026.109. PMC 2765279. PMID 19726446.
Wilson BA, Masel J (2011). "Putatively noncoding transcripts show extensive association with ribosomes". Genome Biology and Evolution. 3: 1245–1252. doi:10.1093/gbe/evr099. PMC 3209793. PMID 21948395.
Stoltzfus A (August 1999). "On the possibility of constructive neutral evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. PMID 10441669. S2CID 1743092.
Stoltzfus A (October 2012). "Constructive neutral evolution: exploring evolutionary theory's curious disconnect". Biology Direct. 7 (1): 35. doi:10.1186/1745-6150-7-35. PMC 3534586. PMID 23062217.
Muñoz-Gómez SA, Bilolikar G, Wideman JG, Geiler-Samerotte K (April 2021). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. PMC 7982386. PMID 33604782.
Lukeš J, Archibald JM, Keeling PJ, Doolittle WF, Gray MW (July 2011). "How a neutral evolutionary ratchet can build cellular complexity". IUBMB Life. 63 (7): 528–537. doi:10.1002/iub.489. PMID 21698757. S2CID 7306575.
Vosseberg J, Snel B (December 2017). "Domestication of self-splicing introns during eukaryogenesis: the rise of the complex spliceosomal machinery". Biology Direct. 12 (1): 30. doi:10.1186/s13062-017-0201-6. PMC 5709842. PMID 29191215.
Brunet TD, Doolittle WF (19 March 2018). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.

handle.net

hdl.handle.net

Wang, Yiguan; Obbard, Darren J (19 July 2023). "Experimental estimates of germline mutation rate in eukaryotes: a phylogenetic meta-analysis". Evolution Letters. 7 (4): 216–226. doi:10.1093/evlett/qrad027. hdl:20.500.11820/8ffd5b76-77ae-4764-ae31-de2fb8aa35cf. PMC 10355183. PMID 37475753.

harvard.edu

ui.adsabs.harvard.edu

Zuckerkandl, Emile; Pauling, Linus (March 1965). "Molecules as documents of evolutionary history". Journal of Theoretical Biology. 8 (2): 357–366. Bibcode:1965JThBi...8..357Z. doi:10.1016/0022-5193(65)90083-4. PMID 5876245.
Kimura M (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–626. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King JL, Jukes TH (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–798. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Bhattacharya S, Margheritis EG, Takahashi K, Kulesha A, D'Souza A, Kim I, et al. (October 2022). "NMR-guided directed evolution". Nature. 610 (7931): 389–393. Bibcode:2022Natur.610..389B. doi:10.1038/s41586-022-05278-9. PMC 10116341. PMID 36198791. S2CID 245067145.
A. V. Cano and J. L. Payne (2020). "Mutation bias interacts with composition bias to influence adaptive evolution". PLOS Computational Biology. 16 (9): e1008296. Bibcode:2020PLSCB..16E8296C. doi:10.1371/journal.pcbi.1008296. PMC 7571706. PMID 32986712.
E. Freese (1962). "On the Evolution of the Base Composition of DNA". J. Theor. Biol. 3 (1): 82–101. Bibcode:1962JThBi...3...82F. doi:10.1016/S0022-5193(62)80005-8. It is unimportant in this connection whether selection has been negligible or self-cancelling.
N. Sueoka (1962). "On the Genetic Basis of Variation and Heterogeneity of DNA Base Composition". Proc. Natl. Acad. Sci. U.S.A. 48 (4): 582–592. Bibcode:1962PNAS...48..582S. doi:10.1073/pnas.48.4.582. PMC 220819. PMID 13918161.
Organ CL, Shedlock AM, Meade A, Pagel M, Edwards SV (March 2007). "Origin of avian genome size and structure in non-avian dinosaurs". Nature. 446 (7132): 180–184. Bibcode:2007Natur.446..180O. doi:10.1038/nature05621. PMID 17344851. S2CID 3031794.
Crosland MW, Crozier RH (March 1986). "Myrmecia pilosula, an Ant with Only One Pair of Chromosomes". Science. 231 (4743): 1278. Bibcode:1986Sci...231.1278C. doi:10.1126/science.231.4743.1278. PMID 17839565. S2CID 25465053.
Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ (June 2006). "Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression". Proceedings of the National Academy of Sciences of the United States of America. 103 (26): 9935–9939. Bibcode:2006PNAS..103.9935L. doi:10.1073/pnas.0509809103. PMC 1502557. PMID 16777968.
Xiao W, Liu H, Li Y, Li X, Xu C, Long M, Wang S (2009). El-Shemy HA (ed.). "A rice gene of de novo origin negatively regulates pathogen-induced defense response". PLOS ONE. 4 (2): e4603. Bibcode:2009PLoSO...4.4603X. doi:10.1371/journal.pone.0004603. PMC 2643483. PMID 19240804.
Stoltzfus A (August 1999). "On the possibility of constructive neutral evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. PMID 10441669. S2CID 1743092.
Muñoz-Gómez SA, Bilolikar G, Wideman JG, Geiler-Samerotte K (April 2021). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. PMC 7982386. PMID 33604782.

mun.ca

"Transitions vs transversions".

nih.gov

pubmed.ncbi.nlm.nih.gov

Dietrich MR (1998). "Paradox and persuasion: negotiating the place of molecular evolution within evolutionary biology". Journal of the History of Biology. 31 (1): 85–111. doi:10.1023/A:1004257523100. PMID 11619919. S2CID 29935487.
Hagen JB (1999). "Naturalists, molecular biologists, and the challenges of molecular evolution". Journal of the History of Biology. 32 (2): 321–341. doi:10.1023/A:1004660202226. PMID 11624208. S2CID 26994015.
Zuckerkandl, Emile; Pauling, Linus (March 1965). "Molecules as documents of evolutionary history". Journal of Theoretical Biology. 8 (2): 357–366. Bibcode:1965JThBi...8..357Z. doi:10.1016/0022-5193(65)90083-4. PMID 5876245.
Kimura M (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–626. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King JL, Jukes TH (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–798. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Fay JC, Wu CI (2003). "Sequence divergence, functional constraint, and selection in protein evolution". Annual Review of Genomics and Human Genetics. 4: 213–235. doi:10.1146/annurev.genom.4.020303.162528. PMID 14527302. S2CID 6360375.
Álvarez-Carretero, Sandra; Kapli, Paschalia; Yang, Ziheng (4 April 2023). "Beginner's Guide on the Use of PAML to Detect Positive Selection". Molecular Biology and Evolution. 40 (4). doi:10.1093/molbev/msad041. PMC 10127084. PMID 37096789.
Hanukoglu I (February 2017). "ASIC and ENaC type sodium channels: conformational states and the structures of the ion selectivity filters". The FEBS Journal. 284 (4): 525–545. doi:10.1111/febs.13840. PMID 27580245. S2CID 24402104.
Hanukoglu I, Hanukoglu A (April 2016). "Epithelial sodium channel (ENaC) family: Phylogeny, structure-function, tissue distribution, and associated inherited diseases". Gene. 579 (2): 95–132. doi:10.1016/j.gene.2015.12.061. PMC 4756657. PMID 26772908.
Burnim AA, Spence MA, Xu D, Jackson CJ, Ando N (September 2022). Ben-Tal N, Weigel D, Ben-Tal N, Stubbe J, Hofer A (eds.). "Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade". eLife. 11: e79790. doi:10.7554/eLife.79790. PMC 9531940. PMID 36047668.
Bhattacharya S, Margheritis EG, Takahashi K, Kulesha A, D'Souza A, Kim I, et al. (October 2022). "NMR-guided directed evolution". Nature. 610 (7931): 389–393. Bibcode:2022Natur.610..389B. doi:10.1038/s41586-022-05278-9. PMC 10116341. PMID 36198791. S2CID 245067145.
Wang, Yiguan; Obbard, Darren J (19 July 2023). "Experimental estimates of germline mutation rate in eukaryotes: a phylogenetic meta-analysis". Evolution Letters. 7 (4): 216–226. doi:10.1093/evlett/qrad027. hdl:20.500.11820/8ffd5b76-77ae-4764-ae31-de2fb8aa35cf. PMC 10355183. PMID 37475753.
Peck, Kayla M.; Lauring, Adam S. (15 July 2018). "Complexities of Viral Mutation Rates". Journal of Virology. 92 (14): e01031-17. doi:10.1128/JVI.01031-17. PMC 6026756. PMID 29720522.
J. L. Weber and C. Wong (1993). "Mutation of human short tandem repeats". Hum Mol Genet. 2 (8): 1123–8. doi:10.1093/hmg/2.8.1123. PMID 8401493.
A. V. Cano and J. L. Payne (2020). "Mutation bias interacts with composition bias to influence adaptive evolution". PLOS Computational Biology. 16 (9): e1008296. Bibcode:2020PLSCB..16E8296C. doi:10.1371/journal.pcbi.1008296. PMC 7571706. PMID 32986712.
N. Sueoka (1962). "On the Genetic Basis of Variation and Heterogeneity of DNA Base Composition". Proc. Natl. Acad. Sci. U.S.A. 48 (4): 582–592. Bibcode:1962PNAS...48..582S. doi:10.1073/pnas.48.4.582. PMC 220819. PMID 13918161.
A. Stoltzfus and L. Y. Yampolsky (2009). "Climbing mount probable: mutation as a cause of nonrandomness in evolution". J Hered. 100 (5): 637–47. doi:10.1093/jhered/esp048. PMID 19625453.
Hershberg R, Petrov DA (December 2008). "Selection on codon bias". Annual Review of Genetics. 42 (1): 287–299. doi:10.1146/annurev.genet.42.110807.091442. PMID 18983258. S2CID 7085012.
Duret L, Galtier N (2009). "Biased gene conversion and the evolution of mammalian genomic landscapes". Annual Review of Genomics and Human Genetics. 10: 285–311. doi:10.1146/annurev-genom-082908-150001. PMID 19630562.
Galtier N, Piganeau G, Mouchiroud D, Duret L (October 2001). "GC-content evolution in mammalian genomes: the biased gene conversion hypothesis". Genetics. 159 (2): 907–911. doi:10.1093/genetics/159.2.907. PMC 1461818. PMID 11693127.
Organ CL, Shedlock AM, Meade A, Pagel M, Edwards SV (March 2007). "Origin of avian genome size and structure in non-avian dinosaurs". Nature. 446 (7132): 180–184. Bibcode:2007Natur.446..180O. doi:10.1038/nature05621. PMID 17344851. S2CID 3031794.
Crosland MW, Crozier RH (March 1986). "Myrmecia pilosula, an Ant with Only One Pair of Chromosomes". Science. 231 (4743): 1278. Bibcode:1986Sci...231.1278C. doi:10.1126/science.231.4743.1278. PMID 17839565. S2CID 25465053.
Pardo-Manuel de Villena, Fernando; Sapienza, Carmen (April 2001). "Recombination is proportional to the number of chromosome arms in mammals". Mammalian Genome. 12 (4): 318–322. doi:10.1007/s003350020005. PMID 11309665.
Kandul NP, Lukhtanov VA, Pierce NE (March 2007). "Karyotypic diversity and speciation in Agrodiaetus butterflies". Evolution; International Journal of Organic Evolution. 61 (3): 546–559. doi:10.1111/j.1558-5646.2007.00046.x. PMID 17348919.
McLysaght A, Guerzoni D (September 2015). "New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370 (1678): 20140332. doi:10.1098/rstb.2014.0332. PMC 4571571. PMID 26323763.
Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ (June 2006). "Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression". Proceedings of the National Academy of Sciences of the United States of America. 103 (26): 9935–9939. Bibcode:2006PNAS..103.9935L. doi:10.1073/pnas.0509809103. PMC 1502557. PMID 16777968.
Zhou Q, Zhang G, Zhang Y, Xu S, Zhao R, Zhan Z, et al. (September 2008). "On the origin of new genes in Drosophila". Genome Research. 18 (9): 1446–1455. doi:10.1101/gr.076588.108. PMC 2527705. PMID 18550802.
Cai J, Zhao R, Jiang H, Wang W (May 2008). "De novo origination of a new protein-coding gene in Saccharomyces cerevisiae". Genetics. 179 (1): 487–496. doi:10.1534/genetics.107.084491. PMC 2390625. PMID 18493065.
Xiao W, Liu H, Li Y, Li X, Xu C, Long M, Wang S (2009). El-Shemy HA (ed.). "A rice gene of de novo origin negatively regulates pathogen-induced defense response". PLOS ONE. 4 (2): e4603. Bibcode:2009PLoSO...4.4603X. doi:10.1371/journal.pone.0004603. PMC 2643483. PMID 19240804.
Knowles DG, McLysaght A (October 2009). "Recent de novo origin of human protein-coding genes". Genome Research. 19 (10): 1752–1759. doi:10.1101/gr.095026.109. PMC 2765279. PMID 19726446.
Wilson BA, Masel J (2011). "Putatively noncoding transcripts show extensive association with ribosomes". Genome Biology and Evolution. 3: 1245–1252. doi:10.1093/gbe/evr099. PMC 3209793. PMID 21948395.
Stoltzfus A (August 1999). "On the possibility of constructive neutral evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. PMID 10441669. S2CID 1743092.
Stoltzfus A (October 2012). "Constructive neutral evolution: exploring evolutionary theory's curious disconnect". Biology Direct. 7 (1): 35. doi:10.1186/1745-6150-7-35. PMC 3534586. PMID 23062217.
Muñoz-Gómez SA, Bilolikar G, Wideman JG, Geiler-Samerotte K (April 2021). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. PMC 7982386. PMID 33604782.
Lukeš J, Archibald JM, Keeling PJ, Doolittle WF, Gray MW (July 2011). "How a neutral evolutionary ratchet can build cellular complexity". IUBMB Life. 63 (7): 528–537. doi:10.1002/iub.489. PMID 21698757. S2CID 7306575.
Vosseberg J, Snel B (December 2017). "Domestication of self-splicing introns during eukaryogenesis: the rise of the complex spliceosomal machinery". Biology Direct. 12 (1): 30. doi:10.1186/s13062-017-0201-6. PMC 5709842. PMID 29191215.

ncbi.nlm.nih.gov

Álvarez-Carretero, Sandra; Kapli, Paschalia; Yang, Ziheng (4 April 2023). "Beginner's Guide on the Use of PAML to Detect Positive Selection". Molecular Biology and Evolution. 40 (4). doi:10.1093/molbev/msad041. PMC 10127084. PMID 37096789.
Hanukoglu I, Hanukoglu A (April 2016). "Epithelial sodium channel (ENaC) family: Phylogeny, structure-function, tissue distribution, and associated inherited diseases". Gene. 579 (2): 95–132. doi:10.1016/j.gene.2015.12.061. PMC 4756657. PMID 26772908.
Burnim AA, Spence MA, Xu D, Jackson CJ, Ando N (September 2022). Ben-Tal N, Weigel D, Ben-Tal N, Stubbe J, Hofer A (eds.). "Comprehensive phylogenetic analysis of the ribonucleotide reductase family reveals an ancestral clade". eLife. 11: e79790. doi:10.7554/eLife.79790. PMC 9531940. PMID 36047668.
Bhattacharya S, Margheritis EG, Takahashi K, Kulesha A, D'Souza A, Kim I, et al. (October 2022). "NMR-guided directed evolution". Nature. 610 (7931): 389–393. Bibcode:2022Natur.610..389B. doi:10.1038/s41586-022-05278-9. PMC 10116341. PMID 36198791. S2CID 245067145.
Wang, Yiguan; Obbard, Darren J (19 July 2023). "Experimental estimates of germline mutation rate in eukaryotes: a phylogenetic meta-analysis". Evolution Letters. 7 (4): 216–226. doi:10.1093/evlett/qrad027. hdl:20.500.11820/8ffd5b76-77ae-4764-ae31-de2fb8aa35cf. PMC 10355183. PMID 37475753.
Peck, Kayla M.; Lauring, Adam S. (15 July 2018). "Complexities of Viral Mutation Rates". Journal of Virology. 92 (14): e01031-17. doi:10.1128/JVI.01031-17. PMC 6026756. PMID 29720522.
A. V. Cano and J. L. Payne (2020). "Mutation bias interacts with composition bias to influence adaptive evolution". PLOS Computational Biology. 16 (9): e1008296. Bibcode:2020PLSCB..16E8296C. doi:10.1371/journal.pcbi.1008296. PMC 7571706. PMID 32986712.
N. Sueoka (1962). "On the Genetic Basis of Variation and Heterogeneity of DNA Base Composition". Proc. Natl. Acad. Sci. U.S.A. 48 (4): 582–592. Bibcode:1962PNAS...48..582S. doi:10.1073/pnas.48.4.582. PMC 220819. PMID 13918161.
Galtier N, Piganeau G, Mouchiroud D, Duret L (October 2001). "GC-content evolution in mammalian genomes: the biased gene conversion hypothesis". Genetics. 159 (2): 907–911. doi:10.1093/genetics/159.2.907. PMC 1461818. PMID 11693127.
McLysaght A, Guerzoni D (September 2015). "New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 370 (1678): 20140332. doi:10.1098/rstb.2014.0332. PMC 4571571. PMID 26323763.
Levine MT, Jones CD, Kern AD, Lindfors HA, Begun DJ (June 2006). "Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression". Proceedings of the National Academy of Sciences of the United States of America. 103 (26): 9935–9939. Bibcode:2006PNAS..103.9935L. doi:10.1073/pnas.0509809103. PMC 1502557. PMID 16777968.
Zhou Q, Zhang G, Zhang Y, Xu S, Zhao R, Zhan Z, et al. (September 2008). "On the origin of new genes in Drosophila". Genome Research. 18 (9): 1446–1455. doi:10.1101/gr.076588.108. PMC 2527705. PMID 18550802.
Cai J, Zhao R, Jiang H, Wang W (May 2008). "De novo origination of a new protein-coding gene in Saccharomyces cerevisiae". Genetics. 179 (1): 487–496. doi:10.1534/genetics.107.084491. PMC 2390625. PMID 18493065.
Xiao W, Liu H, Li Y, Li X, Xu C, Long M, Wang S (2009). El-Shemy HA (ed.). "A rice gene of de novo origin negatively regulates pathogen-induced defense response". PLOS ONE. 4 (2): e4603. Bibcode:2009PLoSO...4.4603X. doi:10.1371/journal.pone.0004603. PMC 2643483. PMID 19240804.
Knowles DG, McLysaght A (October 2009). "Recent de novo origin of human protein-coding genes". Genome Research. 19 (10): 1752–1759. doi:10.1101/gr.095026.109. PMC 2765279. PMID 19726446.
Wilson BA, Masel J (2011). "Putatively noncoding transcripts show extensive association with ribosomes". Genome Biology and Evolution. 3: 1245–1252. doi:10.1093/gbe/evr099. PMC 3209793. PMID 21948395.
Stoltzfus A (October 2012). "Constructive neutral evolution: exploring evolutionary theory's curious disconnect". Biology Direct. 7 (1): 35. doi:10.1186/1745-6150-7-35. PMC 3534586. PMID 23062217.
Muñoz-Gómez SA, Bilolikar G, Wideman JG, Geiler-Samerotte K (April 2021). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. PMC 7982386. PMID 33604782.
Vosseberg J, Snel B (December 2017). "Domestication of self-splicing introns during eukaryogenesis: the rise of the complex spliceosomal machinery". Biology Direct. 12 (1): 30. doi:10.1186/s13062-017-0201-6. PMC 5709842. PMID 29191215.

semanticscholar.org

api.semanticscholar.org

Dietrich MR (1998). "Paradox and persuasion: negotiating the place of molecular evolution within evolutionary biology". Journal of the History of Biology. 31 (1): 85–111. doi:10.1023/A:1004257523100. PMID 11619919. S2CID 29935487.
Hagen JB (1999). "Naturalists, molecular biologists, and the challenges of molecular evolution". Journal of the History of Biology. 32 (2): 321–341. doi:10.1023/A:1004660202226. PMID 11624208. S2CID 26994015.
Kimura M (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–626. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
Fay JC, Wu CI (2003). "Sequence divergence, functional constraint, and selection in protein evolution". Annual Review of Genomics and Human Genetics. 4: 213–235. doi:10.1146/annurev.genom.4.020303.162528. PMID 14527302. S2CID 6360375.
Hanukoglu I (February 2017). "ASIC and ENaC type sodium channels: conformational states and the structures of the ion selectivity filters". The FEBS Journal. 284 (4): 525–545. doi:10.1111/febs.13840. PMID 27580245. S2CID 24402104.
Bhattacharya S, Margheritis EG, Takahashi K, Kulesha A, D'Souza A, Kim I, et al. (October 2022). "NMR-guided directed evolution". Nature. 610 (7931): 389–393. Bibcode:2022Natur.610..389B. doi:10.1038/s41586-022-05278-9. PMC 10116341. PMID 36198791. S2CID 245067145.
Hershberg R, Petrov DA (December 2008). "Selection on codon bias". Annual Review of Genetics. 42 (1): 287–299. doi:10.1146/annurev.genet.42.110807.091442. PMID 18983258. S2CID 7085012.
Organ CL, Shedlock AM, Meade A, Pagel M, Edwards SV (March 2007). "Origin of avian genome size and structure in non-avian dinosaurs". Nature. 446 (7132): 180–184. Bibcode:2007Natur.446..180O. doi:10.1038/nature05621. PMID 17344851. S2CID 3031794.
Crosland MW, Crozier RH (March 1986). "Myrmecia pilosula, an Ant with Only One Pair of Chromosomes". Science. 231 (4743): 1278. Bibcode:1986Sci...231.1278C. doi:10.1126/science.231.4743.1278. PMID 17839565. S2CID 25465053.
Stoltzfus A (August 1999). "On the possibility of constructive neutral evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. PMID 10441669. S2CID 1743092.
Lukeš J, Archibald JM, Keeling PJ, Doolittle WF, Gray MW (July 2011). "How a neutral evolutionary ratchet can build cellular complexity". IUBMB Life. 63 (7): 528–537. doi:10.1002/iub.489. PMID 21698757. S2CID 7306575.
Brunet TD, Doolittle WF (19 March 2018). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.

singerinstruments.com

Yang, J. (2016, March 23). What are Genetic Mutation? Retrieved from https://www.singerinstruments.com/resource/what-are-genetic-mutation/ .

worldcat.org

search.worldcat.org

Brunet TD, Doolittle WF (19 March 2018). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.

zenodo.org

Hanukoglu I (February 2017). "ASIC and ENaC type sodium channels: conformational states and the structures of the ion selectivity filters". The FEBS Journal. 284 (4): 525–545. doi:10.1111/febs.13840. PMID 27580245. S2CID 24402104.