Neutral theory of molecular evolution (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Neutral theory of molecular evolution" in English language version.

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Nei, Masatoshi; Suzuki, Yoshiyuki; Nozawa, Masafumi (2010-09-01). "The Neutral Theory of Molecular Evolution in the Genomic Era". Annual Review of Genomics and Human Genetics. 11 (1): 265–289. doi:10.1146/annurev-genom-082908-150129. ISSN 1527-8204. PMID 20565254.

archive.org

Zuckerkandl, Emile; Pauling, Linus B. (1962). "Molecular disease, evolution, and genetic heterogeneity". In Kasha, M.; Pullman, B. (eds.). Horizons in Biochemistry. Academic Press. pp. 189–225.
Lewontin, Richard C. (1973). The genetic basis of evolutionary change (4th printing ed.). Columbia University Press. ISBN 978-0231033923.

doi.org

Fenchel, Tom (2005-11-11). "Cosmopolitan microbes and their 'cryptic' species". Aquatic Microbial Ecology. 41 (1): 49–54. doi:10.3354/ame041049. ISSN 0948-3055.
Koonin, Eugene V. (2016). "Splendor and misery of adaptation, or the importance of neutral null for understanding evolution". BMC Biology. 14 (1): 114. doi:10.1186/s12915-016-0338-2. ISSN 1741-7007. PMC 5180405. PMID 28010725.
Lahr, Daniel J. G.; Laughinghouse, Haywood Dail; Oliverio, Angela M.; Gao, Feng; Katz, Laura A. (2014). "How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth: Prospects & Overviews". BioEssays. 36 (10): 950–959. doi:10.1002/bies.201400056. PMC 4288574. PMID 25156897.
Freese, E. (July 1962). "On the evolution of the base composition of DNA". Journal of Theoretical Biology. 3 (1): 82–101. Bibcode:1962JThBi...3...82F. doi:10.1016/S0022-5193(62)80005-8.
Kimura, Motoo (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–6. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King, J. L.; Jukes, T. H. (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–98. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Nei, Masatoshi (December 2005). "Selectionism and neutralism in molecular evolution". Molecular Biology and Evolution. 22 (12): 2318–2342. doi:10.1093/molbev/msi242. PMC 1513187. PMID 16120807.
Kimura, M. (1969-08-01). "The Rate of Molecular Evolution Considered from the Standpoint of Population Genetics". Proceedings of the National Academy of Sciences. 63 (4): 1181–1188. Bibcode:1969PNAS...63.1181K. doi:10.1073/pnas.63.4.1181. ISSN 0027-8424. PMC 223447. PMID 5260917.
Bofkin, L.; Goldman, N. (2006-11-13). "Variation in Evolutionary Processes at Different Codon Positions". Molecular Biology and Evolution. 24 (2): 513–521. doi:10.1093/molbev/msl178. ISSN 0737-4038. PMID 17119011.
Crick, F.H.C. (1989), "Codon—Anticodon Pairing: The Wobble Hypothesis", Molecular Biology, Elsevier, pp. 370–377, doi:10.1016/b978-0-12-131200-8.50026-5, ISBN 978-0-12-131200-8, retrieved 2021-04-03
Kimura, Motoo (November 1979). "The neutral theory of molecular evolution". Scientific American. 241 (5): 98–100, 102, 108 passim. Bibcode:1979SciAm.241e..98K. doi:10.1038/scientificamerican1179-98. JSTOR 24965339. PMID 504979. S2CID 5119551.
Eanes, Walter F. (November 1999). "Analysis of Selection on Enzyme Polymorphisms". Annual Review of Ecology and Systematics. 30 (1): 301–326. Bibcode:1999AnRES..30..301E. doi:10.1146/annurev.ecolsys.30.1.301.
Kreitman, M. (2000). "Methods to detect selection in populations with applications to the human". Annual Review of Genomics and Human Genetics. 1 (1): 539–59. doi:10.1146/annurev.genom.1.1.539. PMID 11701640.
Fay, J. C.; Wyckoff, G. J.; Wu, C. I. (February 2002). "Testing the neutral theory of molecular evolution with genomic data from Drosophila". Nature. 415 (6875): 1024–6. Bibcode:2002Natur.415.1024F. doi:10.1038/4151024a. PMID 11875569. S2CID 4420010.
Begun, D. J.; Holloway, A. K.; Stevens, K.; Hillier, L. W.; Poh, Y. P.; Hahn, M. W.; Nista, P. M.; Jones, C. D.; Kern, A. D.; Dewey, C. N.; Pachter, L.; Myers, E.; Langley, C. H. (November 2007). "Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans". PLOS Biology. 5 (11): e310. doi:10.1371/journal.pbio.0050310. PMC 2062478. PMID 17988176.
Shapiro, J. A.; Huang, W.; Zhang, C.; Hubisz, M. J.; Lu, J.; Turissini, D. A.; Fang, S.; Wang, H. Y.; Hudson, RR; Nielsen, R.; Chen, Z.; Wu, C. I. (February 2007). "Adaptive genic evolution in the Drosophila genomes". PNAS. 104 (7): 2271–6. Bibcode:2007PNAS..104.2271S. doi:10.1073/pnas.0610385104. PMC 1892965. PMID 17284599.
Hahn, M. W. (February 2008). "Toward a selection theory of molecular evolution". Evolution; International Journal of Organic Evolution. 62 (2): 255–65. doi:10.1111/j.1558-5646.2007.00308.x. PMID 18302709.
Akey, J. M. (May 2009). "Constructing genomic maps of positive selection in humans: where do we go from here?". Genome Research. 19 (5): 711–22. doi:10.1101/gr.086652.108. PMC 3647533. PMID 19411596.
Kern, A. D.; Hahn, M. W. (June 2018). "The Neutral Theory in Light of Natural Selection". Molecular Biology and Evolution. 35 (6): 1366–1371. doi:10.1093/molbev/msy092. PMC 5967545. PMID 29722831.
Jensen, J.D.; Payseur, B. A.; Stephan, W.; Aquadro C. F.; Lynch, M. Charlesworth, D.; Charlesworth, B. (January 2019). "The importance of the Neutral Theory in 1968 and 50 years on: A response to Kern and Hahn 2018". Evolution; International Journal of Organic Evolution. 73 (1): 111–114. doi:10.1111/evo.13650. PMC 6496948. PMID 30460993.{{cite journal}}: CS1 maint: multiple names: authors list (link)
Ohta, T. (December 2002). "Near-neutrality in evolution of genes and gene regulation". Proceedings of the National Academy of Sciences of the United States of America. 99 (25): 16134–7. Bibcode:2002PNAS...9916134O. doi:10.1073/pnas.252626899. PMC 138577. PMID 12461171.
Ohta, Tomoko (1973). "Slightly Deleterious Mutant Substitutions in Evolution". Nature. 246 (5428): 96–98. Bibcode:1973Natur.246...96O. doi:10.1038/246096a0. ISSN 1476-4687. PMID 4585855. S2CID 4226804.
Hughes, Austin L. (2008). "Near Neutrality: the leading edge of the Neutral Theory of Molecular Evolution". Annals of the New York Academy of Sciences. 1133 (1): 162–179. Bibcode:2008NYASA1133..162H. doi:10.1196/annals.1438.001. ISSN 0077-8923. PMC 2707937. PMID 18559820.
Covello, Patrick S.; Gray, MichaelW. (1993). "On the evolution of RNA editing". Trends in Genetics. 9 (8): 265–268. doi:10.1016/0168-9525(93)90011-6. PMID 8379005.
Stoltzfus, Arlin (1999). "On the Possibility of Constructive Neutral Evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. ISSN 0022-2844. PMID 10441669. S2CID 1743092.
Muñoz-Gómez, Sergio A.; Bilolikar, Gaurav; Wideman, Jeremy G.; Geiler-Samerotte, Kerry (2021-04-01). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. ISSN 1432-1432. PMC 7982386. PMID 33604782.
Speijer, Dave (2011). "Does constructive neutral evolution play an important role in the origin of cellular complexity?: Making sense of the origins and uses of biological complexity". BioEssays. 33 (5): 344–349. doi:10.1002/bies.201100010. PMID 21381061. S2CID 205470421.
Stoltzfus, Arlin (2012-10-13). "Constructive neutral evolution: exploring evolutionary theory's curious disconnect". Biology Direct. 7 (1): 35. doi:10.1186/1745-6150-7-35. ISSN 1745-6150. PMC 3534586. PMID 23062217.
Gray, Michael W.; Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford (2010-11-12). "Irremediable Complexity?". Science. 330 (6006): 920–921. Bibcode:2010Sci...330..920G. doi:10.1126/science.1198594. ISSN 0036-8075. PMID 21071654. S2CID 206530279.
Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford; Gray, Michael W. (2011). "How a neutral evolutionary ratchet can build cellular complexity". IUBMB Life. 63 (7): 528–537. doi:10.1002/iub.489. PMID 21698757. S2CID 7306575.
Lamech, Lilian T.; Mallam, Anna L.; Lambowitz, Alan M. (2014-12-23). Herschlag, Daniel (ed.). "Evolution of RNA-Protein Interactions: Non-Specific Binding Led to RNA Splicing Activity of Fungal Mitochondrial Tyrosyl-tRNA Synthetases". PLOS Biology. 12 (12): e1002028. doi:10.1371/journal.pbio.1002028. ISSN 1545-7885. PMC 4275181. PMID 25536042.
Palazzo, Alexander F.; Koonin, Eugene V. (2020-11-25). "Functional Long Non-coding RNAs Evolve from Junk Transcripts". Cell. 183 (5): 1151–1161. doi:10.1016/j.cell.2020.09.047. PMID 33068526. S2CID 222815635.
Finnigan, Gregory C.; Hanson-Smith, Victor; Stevens, Tom H.; Thornton, Joseph W. (2012-01-09). "Evolution of increased complexity in a molecular machine". Nature. 481 (7381): 360–364. Bibcode:2012Natur.481..360F. doi:10.1038/nature10724. ISSN 0028-0836. PMC 3979732. PMID 22230956.
Gould, S. J.; Lewontin, R. C.; Maynard Smith, J.; Holliday, Robin (1979-09-21). "The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme". Proceedings of the Royal Society of London. Series B. Biological Sciences. 205 (1161): 581–598. Bibcode:1979RSPSB.205..581G. doi:10.1098/rspb.1979.0086. PMID 42062. S2CID 2129408.
Brunet, T. D. P.; Doolittle, W. Ford (2018-03-19). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.
Nei, Masatoshi; Suzuki, Yoshiyuki; Nozawa, Masafumi (2010-09-01). "The Neutral Theory of Molecular Evolution in the Genomic Era". Annual Review of Genomics and Human Genetics. 11 (1): 265–289. doi:10.1146/annurev-genom-082908-150129. ISSN 1527-8204. PMID 20565254.
Bakewell, Margaret A.; Shi, Peng; Zhang, Jianzhi (May 2007). "More genes underwent positive selection in chimpanzee evolution than in human evolution". Proceedings of the National Academy of Sciences. 104 (18): 7489–7494. Bibcode:2007PNAS..104.7489B. doi:10.1073/pnas.0701705104. ISSN 0027-8424. PMC 1863478. PMID 17449636.
Chen, Jianhai; Ni, Pan; Li, Xinyun; Han, Jianlin; Jakovlić, Ivan; Zhang, Chengjun; Zhao, Shuhong (2018-01-19). "Population size may shape the accumulation of functional mutations following domestication". BMC Evolutionary Biology. 18 (1): 4. Bibcode:2018BMCEE..18....4C. doi:10.1186/s12862-018-1120-6. ISSN 1471-2148. PMC 5775542. PMID 29351740.
Kern, Andrew D; Hahn, Matthew W (2018-06-01). Kumar, Sudhir (ed.). "The Neutral Theory in Light of Natural Selection". Molecular Biology and Evolution. 35 (6): 1366–1371. doi:10.1093/molbev/msy092. ISSN 0737-4038. PMC 5967545. PMID 29722831.

dx.doi.org

Crick, F.H.C. (1989), "Codon—Anticodon Pairing: The Wobble Hypothesis", Molecular Biology, Elsevier, pp. 370–377, doi:10.1016/b978-0-12-131200-8.50026-5, ISBN 978-0-12-131200-8, retrieved 2021-04-03
Hughes, Austin L. (2008). "Near Neutrality: the leading edge of the Neutral Theory of Molecular Evolution". Annals of the New York Academy of Sciences. 1133 (1): 162–179. Bibcode:2008NYASA1133..162H. doi:10.1196/annals.1438.001. ISSN 0077-8923. PMC 2707937. PMID 18559820.

elsevier.com

linkinghub.elsevier.com

Covello, Patrick S.; Gray, MichaelW. (1993). "On the evolution of RNA editing". Trends in Genetics. 9 (8): 265–268. doi:10.1016/0168-9525(93)90011-6. PMID 8379005.

harvard.edu

ui.adsabs.harvard.edu

Freese, E. (July 1962). "On the evolution of the base composition of DNA". Journal of Theoretical Biology. 3 (1): 82–101. Bibcode:1962JThBi...3...82F. doi:10.1016/S0022-5193(62)80005-8.
Kimura, Motoo (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–6. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King, J. L.; Jukes, T. H. (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–98. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Kimura, M. (1969-08-01). "The Rate of Molecular Evolution Considered from the Standpoint of Population Genetics". Proceedings of the National Academy of Sciences. 63 (4): 1181–1188. Bibcode:1969PNAS...63.1181K. doi:10.1073/pnas.63.4.1181. ISSN 0027-8424. PMC 223447. PMID 5260917.
Kimura, Motoo (November 1979). "The neutral theory of molecular evolution". Scientific American. 241 (5): 98–100, 102, 108 passim. Bibcode:1979SciAm.241e..98K. doi:10.1038/scientificamerican1179-98. JSTOR 24965339. PMID 504979. S2CID 5119551.
Eanes, Walter F. (November 1999). "Analysis of Selection on Enzyme Polymorphisms". Annual Review of Ecology and Systematics. 30 (1): 301–326. Bibcode:1999AnRES..30..301E. doi:10.1146/annurev.ecolsys.30.1.301.
Fay, J. C.; Wyckoff, G. J.; Wu, C. I. (February 2002). "Testing the neutral theory of molecular evolution with genomic data from Drosophila". Nature. 415 (6875): 1024–6. Bibcode:2002Natur.415.1024F. doi:10.1038/4151024a. PMID 11875569. S2CID 4420010.
Shapiro, J. A.; Huang, W.; Zhang, C.; Hubisz, M. J.; Lu, J.; Turissini, D. A.; Fang, S.; Wang, H. Y.; Hudson, RR; Nielsen, R.; Chen, Z.; Wu, C. I. (February 2007). "Adaptive genic evolution in the Drosophila genomes". PNAS. 104 (7): 2271–6. Bibcode:2007PNAS..104.2271S. doi:10.1073/pnas.0610385104. PMC 1892965. PMID 17284599.
Ohta, T. (December 2002). "Near-neutrality in evolution of genes and gene regulation". Proceedings of the National Academy of Sciences of the United States of America. 99 (25): 16134–7. Bibcode:2002PNAS...9916134O. doi:10.1073/pnas.252626899. PMC 138577. PMID 12461171.
Ohta, Tomoko (1973). "Slightly Deleterious Mutant Substitutions in Evolution". Nature. 246 (5428): 96–98. Bibcode:1973Natur.246...96O. doi:10.1038/246096a0. ISSN 1476-4687. PMID 4585855. S2CID 4226804.
Hughes, Austin L. (2008). "Near Neutrality: the leading edge of the Neutral Theory of Molecular Evolution". Annals of the New York Academy of Sciences. 1133 (1): 162–179. Bibcode:2008NYASA1133..162H. doi:10.1196/annals.1438.001. ISSN 0077-8923. PMC 2707937. PMID 18559820.
Stoltzfus, Arlin (1999). "On the Possibility of Constructive Neutral Evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. ISSN 0022-2844. PMID 10441669. S2CID 1743092.
Muñoz-Gómez, Sergio A.; Bilolikar, Gaurav; Wideman, Jeremy G.; Geiler-Samerotte, Kerry (2021-04-01). "Constructive Neutral Evolution 20 Years Later". Journal of Molecular Evolution. 89 (3): 172–182. Bibcode:2021JMolE..89..172M. doi:10.1007/s00239-021-09996-y. ISSN 1432-1432. PMC 7982386. PMID 33604782.
Gray, Michael W.; Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford (2010-11-12). "Irremediable Complexity?". Science. 330 (6006): 920–921. Bibcode:2010Sci...330..920G. doi:10.1126/science.1198594. ISSN 0036-8075. PMID 21071654. S2CID 206530279.
Finnigan, Gregory C.; Hanson-Smith, Victor; Stevens, Tom H.; Thornton, Joseph W. (2012-01-09). "Evolution of increased complexity in a molecular machine". Nature. 481 (7381): 360–364. Bibcode:2012Natur.481..360F. doi:10.1038/nature10724. ISSN 0028-0836. PMC 3979732. PMID 22230956.
Gould, S. J.; Lewontin, R. C.; Maynard Smith, J.; Holliday, Robin (1979-09-21). "The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme". Proceedings of the Royal Society of London. Series B. Biological Sciences. 205 (1161): 581–598. Bibcode:1979RSPSB.205..581G. doi:10.1098/rspb.1979.0086. PMID 42062. S2CID 2129408.
Bakewell, Margaret A.; Shi, Peng; Zhang, Jianzhi (May 2007). "More genes underwent positive selection in chimpanzee evolution than in human evolution". Proceedings of the National Academy of Sciences. 104 (18): 7489–7494. Bibcode:2007PNAS..104.7489B. doi:10.1073/pnas.0701705104. ISSN 0027-8424. PMC 1863478. PMID 17449636.
Chen, Jianhai; Ni, Pan; Li, Xinyun; Han, Jianlin; Jakovlić, Ivan; Zhang, Chengjun; Zhao, Shuhong (2018-01-19). "Population size may shape the accumulation of functional mutations following domestication". BMC Evolutionary Biology. 18 (1): 4. Bibcode:2018BMCEE..18....4C. doi:10.1186/s12862-018-1120-6. ISSN 1471-2148. PMC 5775542. PMID 29351740.

int-res.com

Fenchel, Tom (2005-11-11). "Cosmopolitan microbes and their 'cryptic' species". Aquatic Microbial Ecology. 41 (1): 49–54. doi:10.3354/ame041049. ISSN 0948-3055.

jstor.org

Kimura, Motoo (November 1979). "The neutral theory of molecular evolution". Scientific American. 241 (5): 98–100, 102, 108 passim. Bibcode:1979SciAm.241e..98K. doi:10.1038/scientificamerican1179-98. JSTOR 24965339. PMID 504979. S2CID 5119551.

nature.com

Ohta, Tomoko (1973). "Slightly Deleterious Mutant Substitutions in Evolution". Nature. 246 (5428): 96–98. Bibcode:1973Natur.246...96O. doi:10.1038/246096a0. ISSN 1476-4687. PMID 4585855. S2CID 4226804.

nih.gov

pubmed.ncbi.nlm.nih.gov

Koonin, Eugene V. (2016). "Splendor and misery of adaptation, or the importance of neutral null for understanding evolution". BMC Biology. 14 (1): 114. doi:10.1186/s12915-016-0338-2. ISSN 1741-7007. PMC 5180405. PMID 28010725.
Lahr, Daniel J. G.; Laughinghouse, Haywood Dail; Oliverio, Angela M.; Gao, Feng; Katz, Laura A. (2014). "How discordant morphological and molecular evolution among microorganisms can revise our notions of biodiversity on Earth: Prospects & Overviews". BioEssays. 36 (10): 950–959. doi:10.1002/bies.201400056. PMC 4288574. PMID 25156897.
Kimura, Motoo (February 1968). "Evolutionary rate at the molecular level". Nature. 217 (5129): 624–6. Bibcode:1968Natur.217..624K. doi:10.1038/217624a0. PMID 5637732. S2CID 4161261.
King, J. L.; Jukes, T. H. (May 1969). "Non-Darwinian evolution". Science. 164 (3881): 788–98. Bibcode:1969Sci...164..788L. doi:10.1126/science.164.3881.788. PMID 5767777.
Nei, Masatoshi (December 2005). "Selectionism and neutralism in molecular evolution". Molecular Biology and Evolution. 22 (12): 2318–2342. doi:10.1093/molbev/msi242. PMC 1513187. PMID 16120807.
Kimura, M. (1969-08-01). "The Rate of Molecular Evolution Considered from the Standpoint of Population Genetics". Proceedings of the National Academy of Sciences. 63 (4): 1181–1188. Bibcode:1969PNAS...63.1181K. doi:10.1073/pnas.63.4.1181. ISSN 0027-8424. PMC 223447. PMID 5260917.
Bofkin, L.; Goldman, N. (2006-11-13). "Variation in Evolutionary Processes at Different Codon Positions". Molecular Biology and Evolution. 24 (2): 513–521. doi:10.1093/molbev/msl178. ISSN 0737-4038. PMID 17119011.
Kimura, Motoo (November 1979). "The neutral theory of molecular evolution". Scientific American. 241 (5): 98–100, 102, 108 passim. Bibcode:1979SciAm.241e..98K. doi:10.1038/scientificamerican1179-98. JSTOR 24965339. PMID 504979. S2CID 5119551.
Kreitman, M. (2000). "Methods to detect selection in populations with applications to the human". Annual Review of Genomics and Human Genetics. 1 (1): 539–59. doi:10.1146/annurev.genom.1.1.539. PMID 11701640.
Fay, J. C.; Wyckoff, G. J.; Wu, C. I. (February 2002). "Testing the neutral theory of molecular evolution with genomic data from Drosophila". Nature. 415 (6875): 1024–6. Bibcode:2002Natur.415.1024F. doi:10.1038/4151024a. PMID 11875569. S2CID 4420010.
Begun, D. J.; Holloway, A. K.; Stevens, K.; Hillier, L. W.; Poh, Y. P.; Hahn, M. W.; Nista, P. M.; Jones, C. D.; Kern, A. D.; Dewey, C. N.; Pachter, L.; Myers, E.; Langley, C. H. (November 2007). "Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans". PLOS Biology. 5 (11): e310. doi:10.1371/journal.pbio.0050310. PMC 2062478. PMID 17988176.
Shapiro, J. A.; Huang, W.; Zhang, C.; Hubisz, M. J.; Lu, J.; Turissini, D. A.; Fang, S.; Wang, H. Y.; Hudson, RR; Nielsen, R.; Chen, Z.; Wu, C. I. (February 2007). "Adaptive genic evolution in the Drosophila genomes". PNAS. 104 (7): 2271–6. Bibcode:2007PNAS..104.2271S. doi:10.1073/pnas.0610385104. PMC 1892965. PMID 17284599.
Hahn, M. W. (February 2008). "Toward a selection theory of molecular evolution". Evolution; International Journal of Organic Evolution. 62 (2): 255–65. doi:10.1111/j.1558-5646.2007.00308.x. PMID 18302709.
Akey, J. M. (May 2009). "Constructing genomic maps of positive selection in humans: where do we go from here?". Genome Research. 19 (5): 711–22. doi:10.1101/gr.086652.108. PMC 3647533. PMID 19411596.
Kern, A. D.; Hahn, M. W. (June 2018). "The Neutral Theory in Light of Natural Selection". Molecular Biology and Evolution. 35 (6): 1366–1371. doi:10.1093/molbev/msy092. PMC 5967545. PMID 29722831.
Jensen, J.D.; Payseur, B. A.; Stephan, W.; Aquadro C. F.; Lynch, M. Charlesworth, D.; Charlesworth, B. (January 2019). "The importance of the Neutral Theory in 1968 and 50 years on: A response to Kern and Hahn 2018". Evolution; International Journal of Organic Evolution. 73 (1): 111–114. doi:10.1111/evo.13650. PMC 6496948. PMID 30460993.{{cite journal}}: CS1 maint: multiple names: authors list (link)
Ohta, T. (December 2002). "Near-neutrality in evolution of genes and gene regulation". Proceedings of the National Academy of Sciences of the United States of America. 99 (25): 16134–7. Bibcode:2002PNAS...9916134O. doi:10.1073/pnas.252626899. PMC 138577. PMID 12461171.
Ohta, Tomoko (1973). "Slightly Deleterious Mutant Substitutions in Evolution". Nature. 246 (5428): 96–98. Bibcode:1973Natur.246...96O. doi:10.1038/246096a0. ISSN 1476-4687. PMID 4585855. S2CID 4226804.
Hughes, Austin L. (2008). "Near Neutrality: the leading edge of the Neutral Theory of Molecular Evolution". Annals of the New York Academy of Sciences. 1133 (1): 162–179. Bibcode:2008NYASA1133..162H. doi:10.1196/annals.1438.001. ISSN 0077-8923. PMC 2707937. PMID 18559820.
Covello, Patrick S.; Gray, MichaelW. (1993). "On the evolution of RNA editing". Trends in Genetics. 9 (8): 265–268. doi:10.1016/0168-9525(93)90011-6. PMID 8379005.
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ncbi.nlm.nih.gov

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oup.com

academic.oup.com

Kern, Andrew D; Hahn, Matthew W (2018-06-01). Kumar, Sudhir (ed.). "The Neutral Theory in Light of Natural Selection". Molecular Biology and Evolution. 35 (6): 1366–1371. doi:10.1093/molbev/msy092. ISSN 0737-4038. PMC 5967545. PMID 29722831.

royalsocietypublishing.org

Gould, S. J.; Lewontin, R. C.; Maynard Smith, J.; Holliday, Robin (1979-09-21). "The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme". Proceedings of the Royal Society of London. Series B. Biological Sciences. 205 (1161): 581–598. Bibcode:1979RSPSB.205..581G. doi:10.1098/rspb.1979.0086. PMID 42062. S2CID 2129408.

science.org

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Gray, Michael W.; Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford (2010-11-12). "Irremediable Complexity?". Science. 330 (6006): 920–921. Bibcode:2010Sci...330..920G. doi:10.1126/science.1198594. ISSN 0036-8075. PMID 21071654. S2CID 206530279.
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springer.com

link.springer.com

Stoltzfus, Arlin (1999). "On the Possibility of Constructive Neutral Evolution". Journal of Molecular Evolution. 49 (2): 169–181. Bibcode:1999JMolE..49..169S. doi:10.1007/PL00006540. ISSN 0022-2844. PMID 10441669. S2CID 1743092.

wiley.com

onlinelibrary.wiley.com

Speijer, Dave (2011). "Does constructive neutral evolution play an important role in the origin of cellular complexity?: Making sense of the origins and uses of biological complexity". BioEssays. 33 (5): 344–349. doi:10.1002/bies.201100010. PMID 21381061. S2CID 205470421.
Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford; Gray, Michael W. (2011). "How a neutral evolutionary ratchet can build cellular complexity". IUBMB Life. 63 (7): 528–537. doi:10.1002/iub.489. PMID 21698757. S2CID 7306575.

worldcat.org

search.worldcat.org

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Gray, Michael W.; Lukeš, Julius; Archibald, John M.; Keeling, Patrick J.; Doolittle, W. Ford (2010-11-12). "Irremediable Complexity?". Science. 330 (6006): 920–921. Bibcode:2010Sci...330..920G. doi:10.1126/science.1198594. ISSN 0036-8075. PMID 21071654. S2CID 206530279.
Lamech, Lilian T.; Mallam, Anna L.; Lambowitz, Alan M. (2014-12-23). Herschlag, Daniel (ed.). "Evolution of RNA-Protein Interactions: Non-Specific Binding Led to RNA Splicing Activity of Fungal Mitochondrial Tyrosyl-tRNA Synthetases". PLOS Biology. 12 (12): e1002028. doi:10.1371/journal.pbio.1002028. ISSN 1545-7885. PMC 4275181. PMID 25536042.
Finnigan, Gregory C.; Hanson-Smith, Victor; Stevens, Tom H.; Thornton, Joseph W. (2012-01-09). "Evolution of increased complexity in a molecular machine". Nature. 481 (7381): 360–364. Bibcode:2012Natur.481..360F. doi:10.1038/nature10724. ISSN 0028-0836. PMC 3979732. PMID 22230956.
Brunet, T. D. P.; Doolittle, W. Ford (2018-03-19). "The generality of Constructive Neutral Evolution". Biology & Philosophy. 33 (1): 2. doi:10.1007/s10539-018-9614-6. ISSN 1572-8404. S2CID 90290787.
Nei, Masatoshi; Suzuki, Yoshiyuki; Nozawa, Masafumi (2010-09-01). "The Neutral Theory of Molecular Evolution in the Genomic Era". Annual Review of Genomics and Human Genetics. 11 (1): 265–289. doi:10.1146/annurev-genom-082908-150129. ISSN 1527-8204. PMID 20565254.
Bakewell, Margaret A.; Shi, Peng; Zhang, Jianzhi (May 2007). "More genes underwent positive selection in chimpanzee evolution than in human evolution". Proceedings of the National Academy of Sciences. 104 (18): 7489–7494. Bibcode:2007PNAS..104.7489B. doi:10.1073/pnas.0701705104. ISSN 0027-8424. PMC 1863478. PMID 17449636.
Chen, Jianhai; Ni, Pan; Li, Xinyun; Han, Jianlin; Jakovlić, Ivan; Zhang, Chengjun; Zhao, Shuhong (2018-01-19). "Population size may shape the accumulation of functional mutations following domestication". BMC Evolutionary Biology. 18 (1): 4. Bibcode:2018BMCEE..18....4C. doi:10.1186/s12862-018-1120-6. ISSN 1471-2148. PMC 5775542. PMID 29351740.
Kern, Andrew D; Hahn, Matthew W (2018-06-01). Kumar, Sudhir (ed.). "The Neutral Theory in Light of Natural Selection". Molecular Biology and Evolution. 35 (6): 1366–1371. doi:10.1093/molbev/msy092. ISSN 0737-4038. PMC 5967545. PMID 29722831.