Nylon-eating bacteria (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Nylon-eating bacteria" in English language version.

refsWebsite

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22nih.gov

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14doi.org

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5harvard.edu

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3worldcat.org

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2semanticscholar.org

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2ebi.ac.uk

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1newscientist.com

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1ecogenomic.org

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1ncse.com

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9,698^th place

1nmsr.org

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1nbcnews.com

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doi.org

Takehara, I; Kato, DI; Takeo, M; Negoro, S (27 April 2017). "Draft Genome Sequence of the Nylon Oligomer-Degrading Bacterium Arthrobacter sp. Strain KI72". Genome Announcements. 5 (17). doi:10.1128/genomeA.00217-17. PMC 5408104. PMID 28450506.
Takehara, I; Fujii, T; Tanimoto, Y (Jan 2018). "Metabolic pathway of 6-aminohexanoate in the nylon oligomer-degrading bacterium Arthrobacter sp. KI72: identification of the enzymes responsible for the conversion of 6-aminohexanoate to adipate". Applied Microbiology and Biotechnology. 102 (2): 801–814. doi:10.1007/s00253-017-8657-y. PMID 29188330. S2CID 20206702.
Kinoshita, S.; Kageyama, S.; Iba, K.; Yamada, Y.; Okada, H. (1975). "Utilization of a cyclic dimer and linear oligomers of e-aminocaproic acid by Achromobacter guttatus KI 72". Agricultural and Biological Chemistry. 39 (6): 1219–23. doi:10.1271/bbb1961.39.1219. ISSN 0002-1369.
S, Kinoshita; S, Negoro; M, Muramatsu; Vs, Bisaria; S, Sawada; H, Okada (1977-11-01). "6-Aminohexanoic Acid Cyclic Dimer Hydrolase. A New Cyclic Amide Hydrolase Produced by Achromobacter Guttatus KI74". European Journal of Biochemistry. 80 (2): 489–95. doi:10.1111/j.1432-1033.1977.tb11904.x. PMID 923591.
Negoro, S; Shinagawa, H; Nakata, A; Kinoshita, S; Hatozaki, T; Okada, H (July 1980). "Plasmid control of 6-aminohexanoic acid cyclic dimer degradation enzymes of Flavobacterium sp. KI72". Journal of Bacteriology. 143 (1): 238–45. doi:10.1128/JB.143.1.238-245.1980. PMC 294219. PMID 7400094.
Negoro, S; Kakudo, S; Urabe, I; Okada, H (1992). "A new nylon oligomer degradation gene (nylC) on plasmid pOAD2 from a Flavobacterium sp". Journal of Bacteriology. 174 (24): 7948–7953. doi:10.1128/jb.174.24.7948-7953.1992. PMC 207530. PMID 1459943.
Negoro S, Ohki T, Shibata N, et al. (June 2007). "Nylon-oligomer degrading enzyme/substrate complex: catalytic mechanism of 6-aminohexanoate-dimer hydrolase". J. Mol. Biol. 370 (1): 142–56. doi:10.1016/j.jmb.2007.04.043. PMID 17512009.
Negoro S, Taniguchi T, Kanaoka M, Kimura H, Okada H (July 1983). "Plasmid-determined enzymatic degradation of nylon oligomers". J. Bacteriol. 155 (1): 22–31. doi:10.1128/JB.155.1.22-31.1983. PMC 217646. PMID 6305910.
Yasuhira, K; Shibata, N; Mongami, G; Uedo, Y; Atsumi, Y; Kawashima, Y; Hibino, A; Tanaka, Y; Lee, YH; Kato, D; Takeo, M; Higuchi, Y; Negoro, S (8 January 2010). "X-ray crystallographic analysis of the 6-aminohexanoate cyclic dimer hydrolase: catalytic mechanism and evolution of an enzyme responsible for nylon-6 byproduct degradation". The Journal of Biological Chemistry. 285 (2): 1239–48. doi:10.1074/jbc.M109.041285. PMC 2801252. PMID 19889645.
Okada, H.; Negoro, S.; Kimura, H.; Nakamura, S. (10–16 November 1983). "Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers". Nature. 306 (5939): 203–206. Bibcode:1983Natur.306..203O. doi:10.1038/306203a0. ISSN 0028-0836. PMID 6646204. S2CID 4364682.
Negoro, S; Shibata, N; Lee, YH; Takehara, I; Kinugasa, R; Nagai, K; Tanaka, Y; Kato, DI; Takeo, M; Goto, Y; Higuchi, Y (27 June 2018). "Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase". Scientific Reports. 8 (1): 9725. Bibcode:2018NatSR...8.9725N. doi:10.1038/s41598-018-27860-w. PMC 6021441. PMID 29950566.
Ohno S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proc Natl Acad Sci USA. 81 (8): 2421–5. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. PMC 345072. PMID 6585807.
Ohno, S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proceedings of the National Academy of Sciences. 81 (8): 2421–2425. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. ISSN 0027-8424. PMC 345072. PMID 6585807.
Prijambada ID, Negoro S, Yomo T, Urabe I (May 1995). "Emergence of nylon oligomer degradation enzymes in Pseudomonas aeruginosa PAO through experimental evolution". Appl. Environ. Microbiol. 61 (5): 2020–2. Bibcode:1995ApEnM..61.2020P. doi:10.1128/AEM.61.5.2020-2022.1995. PMC 167468. PMID 7646041.

ebi.ac.uk

"Q57326". InterPro.
"MEROPS - the Peptidase Database".

ecogenomic.org

gtdb.ecogenomic.org

"GTDB - GCF_002049485.1". Genome Taxonomy Database, revision 95. 2020.

harvard.edu

ui.adsabs.harvard.edu

Okada, H.; Negoro, S.; Kimura, H.; Nakamura, S. (10–16 November 1983). "Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers". Nature. 306 (5939): 203–206. Bibcode:1983Natur.306..203O. doi:10.1038/306203a0. ISSN 0028-0836. PMID 6646204. S2CID 4364682.
Negoro, S; Shibata, N; Lee, YH; Takehara, I; Kinugasa, R; Nagai, K; Tanaka, Y; Kato, DI; Takeo, M; Goto, Y; Higuchi, Y (27 June 2018). "Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase". Scientific Reports. 8 (1): 9725. Bibcode:2018NatSR...8.9725N. doi:10.1038/s41598-018-27860-w. PMC 6021441. PMID 29950566.
Ohno S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proc Natl Acad Sci USA. 81 (8): 2421–5. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. PMC 345072. PMID 6585807.
Ohno, S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proceedings of the National Academy of Sciences. 81 (8): 2421–2425. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. ISSN 0027-8424. PMC 345072. PMID 6585807.
Prijambada ID, Negoro S, Yomo T, Urabe I (May 1995). "Emergence of nylon oligomer degradation enzymes in Pseudomonas aeruginosa PAO through experimental evolution". Appl. Environ. Microbiol. 61 (5): 2020–2. Bibcode:1995ApEnM..61.2020P. doi:10.1128/AEM.61.5.2020-2022.1995. PMC 167468. PMID 7646041.

nbcnews.com

Than, Ker (2005-09-23). "Why scientists dismiss 'intelligent design'". NBC News. Retrieved 2023-09-27.

ncse.com

Thwaites WM (Summer 1985). "New Proteins Without God's Help". Creation Evolution Journal. 5 (2): 1–3.

newscientist.com

Michael Le Page (March 2009). "Five classic examples of gene evolution". New Scientist.

nih.gov

pubmed.ncbi.nlm.nih.gov

Takehara, I; Kato, DI; Takeo, M; Negoro, S (27 April 2017). "Draft Genome Sequence of the Nylon Oligomer-Degrading Bacterium Arthrobacter sp. Strain KI72". Genome Announcements. 5 (17). doi:10.1128/genomeA.00217-17. PMC 5408104. PMID 28450506.
Takehara, I; Fujii, T; Tanimoto, Y (Jan 2018). "Metabolic pathway of 6-aminohexanoate in the nylon oligomer-degrading bacterium Arthrobacter sp. KI72: identification of the enzymes responsible for the conversion of 6-aminohexanoate to adipate". Applied Microbiology and Biotechnology. 102 (2): 801–814. doi:10.1007/s00253-017-8657-y. PMID 29188330. S2CID 20206702.
S, Kinoshita; S, Negoro; M, Muramatsu; Vs, Bisaria; S, Sawada; H, Okada (1977-11-01). "6-Aminohexanoic Acid Cyclic Dimer Hydrolase. A New Cyclic Amide Hydrolase Produced by Achromobacter Guttatus KI74". European Journal of Biochemistry. 80 (2): 489–95. doi:10.1111/j.1432-1033.1977.tb11904.x. PMID 923591.
Negoro, S; Shinagawa, H; Nakata, A; Kinoshita, S; Hatozaki, T; Okada, H (July 1980). "Plasmid control of 6-aminohexanoic acid cyclic dimer degradation enzymes of Flavobacterium sp. KI72". Journal of Bacteriology. 143 (1): 238–45. doi:10.1128/JB.143.1.238-245.1980. PMC 294219. PMID 7400094.
Negoro, S; Kakudo, S; Urabe, I; Okada, H (1992). "A new nylon oligomer degradation gene (nylC) on plasmid pOAD2 from a Flavobacterium sp". Journal of Bacteriology. 174 (24): 7948–7953. doi:10.1128/jb.174.24.7948-7953.1992. PMC 207530. PMID 1459943.
Negoro S, Ohki T, Shibata N, et al. (June 2007). "Nylon-oligomer degrading enzyme/substrate complex: catalytic mechanism of 6-aminohexanoate-dimer hydrolase". J. Mol. Biol. 370 (1): 142–56. doi:10.1016/j.jmb.2007.04.043. PMID 17512009.
Negoro S, Taniguchi T, Kanaoka M, Kimura H, Okada H (July 1983). "Plasmid-determined enzymatic degradation of nylon oligomers". J. Bacteriol. 155 (1): 22–31. doi:10.1128/JB.155.1.22-31.1983. PMC 217646. PMID 6305910.
Yasuhira, K; Shibata, N; Mongami, G; Uedo, Y; Atsumi, Y; Kawashima, Y; Hibino, A; Tanaka, Y; Lee, YH; Kato, D; Takeo, M; Higuchi, Y; Negoro, S (8 January 2010). "X-ray crystallographic analysis of the 6-aminohexanoate cyclic dimer hydrolase: catalytic mechanism and evolution of an enzyme responsible for nylon-6 byproduct degradation". The Journal of Biological Chemistry. 285 (2): 1239–48. doi:10.1074/jbc.M109.041285. PMC 2801252. PMID 19889645.
Okada, H.; Negoro, S.; Kimura, H.; Nakamura, S. (10–16 November 1983). "Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers". Nature. 306 (5939): 203–206. Bibcode:1983Natur.306..203O. doi:10.1038/306203a0. ISSN 0028-0836. PMID 6646204. S2CID 4364682.
Negoro, S; Shibata, N; Lee, YH; Takehara, I; Kinugasa, R; Nagai, K; Tanaka, Y; Kato, DI; Takeo, M; Goto, Y; Higuchi, Y (27 June 2018). "Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase". Scientific Reports. 8 (1): 9725. Bibcode:2018NatSR...8.9725N. doi:10.1038/s41598-018-27860-w. PMC 6021441. PMID 29950566.
Ohno S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proc Natl Acad Sci USA. 81 (8): 2421–5. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. PMC 345072. PMID 6585807.
Ohno, S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proceedings of the National Academy of Sciences. 81 (8): 2421–2425. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. ISSN 0027-8424. PMC 345072. PMID 6585807.
Prijambada ID, Negoro S, Yomo T, Urabe I (May 1995). "Emergence of nylon oligomer degradation enzymes in Pseudomonas aeruginosa PAO through experimental evolution". Appl. Environ. Microbiol. 61 (5): 2020–2. Bibcode:1995ApEnM..61.2020P. doi:10.1128/AEM.61.5.2020-2022.1995. PMC 167468. PMID 7646041.

ncbi.nlm.nih.gov

Takehara, I; Kato, DI; Takeo, M; Negoro, S (27 April 2017). "Draft Genome Sequence of the Nylon Oligomer-Degrading Bacterium Arthrobacter sp. Strain KI72". Genome Announcements. 5 (17). doi:10.1128/genomeA.00217-17. PMC 5408104. PMID 28450506.
Negoro, S; Shinagawa, H; Nakata, A; Kinoshita, S; Hatozaki, T; Okada, H (July 1980). "Plasmid control of 6-aminohexanoic acid cyclic dimer degradation enzymes of Flavobacterium sp. KI72". Journal of Bacteriology. 143 (1): 238–45. doi:10.1128/JB.143.1.238-245.1980. PMC 294219. PMID 7400094.
Negoro, S; Kakudo, S; Urabe, I; Okada, H (1992). "A new nylon oligomer degradation gene (nylC) on plasmid pOAD2 from a Flavobacterium sp". Journal of Bacteriology. 174 (24): 7948–7953. doi:10.1128/jb.174.24.7948-7953.1992. PMC 207530. PMID 1459943.
Negoro S, Taniguchi T, Kanaoka M, Kimura H, Okada H (July 1983). "Plasmid-determined enzymatic degradation of nylon oligomers". J. Bacteriol. 155 (1): 22–31. doi:10.1128/JB.155.1.22-31.1983. PMC 217646. PMID 6305910.
Yasuhira, K; Shibata, N; Mongami, G; Uedo, Y; Atsumi, Y; Kawashima, Y; Hibino, A; Tanaka, Y; Lee, YH; Kato, D; Takeo, M; Higuchi, Y; Negoro, S (8 January 2010). "X-ray crystallographic analysis of the 6-aminohexanoate cyclic dimer hydrolase: catalytic mechanism and evolution of an enzyme responsible for nylon-6 byproduct degradation". The Journal of Biological Chemistry. 285 (2): 1239–48. doi:10.1074/jbc.M109.041285. PMC 2801252. PMID 19889645.
Negoro, S; Shibata, N; Lee, YH; Takehara, I; Kinugasa, R; Nagai, K; Tanaka, Y; Kato, DI; Takeo, M; Goto, Y; Higuchi, Y (27 June 2018). "Structural basis of the correct subunit assembly, aggregation, and intracellular degradation of nylon hydrolase". Scientific Reports. 8 (1): 9725. Bibcode:2018NatSR...8.9725N. doi:10.1038/s41598-018-27860-w. PMC 6021441. PMID 29950566.
Ohno S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proc Natl Acad Sci USA. 81 (8): 2421–5. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. PMC 345072. PMID 6585807.
Ohno, S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proceedings of the National Academy of Sciences. 81 (8): 2421–2425. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. ISSN 0027-8424. PMC 345072. PMID 6585807.
Prijambada ID, Negoro S, Yomo T, Urabe I (May 1995). "Emergence of nylon oligomer degradation enzymes in Pseudomonas aeruginosa PAO through experimental evolution". Appl. Environ. Microbiol. 61 (5): 2020–2. Bibcode:1995ApEnM..61.2020P. doi:10.1128/AEM.61.5.2020-2022.1995. PMC 167468. PMID 7646041.

nmsr.org

"Evolution and Information: The Nylon Bug". New Mexicans for Science Education. Retrieved 2023-09-27.

semanticscholar.org

api.semanticscholar.org

Takehara, I; Fujii, T; Tanimoto, Y (Jan 2018). "Metabolic pathway of 6-aminohexanoate in the nylon oligomer-degrading bacterium Arthrobacter sp. KI72: identification of the enzymes responsible for the conversion of 6-aminohexanoate to adipate". Applied Microbiology and Biotechnology. 102 (2): 801–814. doi:10.1007/s00253-017-8657-y. PMID 29188330. S2CID 20206702.
Okada, H.; Negoro, S.; Kimura, H.; Nakamura, S. (10–16 November 1983). "Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers". Nature. 306 (5939): 203–206. Bibcode:1983Natur.306..203O. doi:10.1038/306203a0. ISSN 0028-0836. PMID 6646204. S2CID 4364682.

worldcat.org

search.worldcat.org

Kinoshita, S.; Kageyama, S.; Iba, K.; Yamada, Y.; Okada, H. (1975). "Utilization of a cyclic dimer and linear oligomers of e-aminocaproic acid by Achromobacter guttatus KI 72". Agricultural and Biological Chemistry. 39 (6): 1219–23. doi:10.1271/bbb1961.39.1219. ISSN 0002-1369.
Okada, H.; Negoro, S.; Kimura, H.; Nakamura, S. (10–16 November 1983). "Evolutionary adaptation of plasmid-encoded enzymes for degrading nylon oligomers". Nature. 306 (5939): 203–206. Bibcode:1983Natur.306..203O. doi:10.1038/306203a0. ISSN 0028-0836. PMID 6646204. S2CID 4364682.
Ohno, S (April 1984). "Birth of a unique enzyme from an alternative reading frame of the preexisted, internally repetitious coding sequence". Proceedings of the National Academy of Sciences. 81 (8): 2421–2425. Bibcode:1984PNAS...81.2421O. doi:10.1073/pnas.81.8.2421. ISSN 0027-8424. PMC 345072. PMID 6585807.