OrthoDB (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "OrthoDB" in English language version.

refsWebsite

Global rank English rank

29nih.gov

4^th place

15doi.org

2^nd place

4harvard.edu

18^th place

17^th place

1embl.de

low place

doi.org

Kriventseva EV, Tegenfeldt F, Petty TJ, Waterhouse RM, Simão FA, Pozdnyakov IA, Ioannidis P, Zdobnov EM (January 2015). "OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software". Nucleic Acids Res. 43 (Database issue): D250–6. doi:10.1093/nar/gku1220. PMC 4383991. PMID 25428351.
Waterhouse RM, Tegenfeldt F, Li J, Zdobnov EM, Kriventseva EV (January 2013). "OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs". Nucleic Acids Res. 41 (Database issue): D358–65. doi:10.1093/nar/gks1116. PMC 3531149. PMID 23180791.
Waterhouse RM, Zdobnov EM, Tegenfeldt F, Li J, Kriventseva EV (January 2011). "OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011". Nucleic Acids Res. 39 (Database issue): D283–8. doi:10.1093/nar/gkq930. PMC 3013786. PMID 20972218.
Kriventseva EV, Rahman N, Espinosa O, Zdobnov EM (Jan 2008). "OrthoDB: the hierarchical catalog of eukaryotic orthologs". Nucleic Acids Res. 36 (Database issue): D271–5. doi:10.1093/nar/gkm845. PMC 2238902. PMID 17947323.
Waterhouse RM, Zdobnov EM, Kriventseva EV (January 2011). "Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi". Genome Biol. Evol. 3: 75–86. doi:10.1093/gbe/evq083. PMC 3030422. PMID 21148284.
Hase T, Niimura Y, Tanaka H (2010). "Difference in gene duplicability may explain the difference in overall structure of protein-protein interaction networks among eukaryotes". BMC Evol. Biol. 10: 358. doi:10.1186/1471-2148-10-358. PMC 2994879. PMID 21087510.
Behura SK, Haugen M, Flannery E, Sarro J, Tessier CR, Severson DW, Duman-Scheel M (2011). "Comparative Genomic Analysis of Drosophila melanogaster and Vector Mosquito Developmental Genes". PLOS ONE. 6 (7): e21504. Bibcode:2011PLoSO...621504B. doi:10.1371/journal.pone.0021504. PMC 3130749. PMID 21754989.
Bonizzoni M, Dunn WA, Campbell CL, Olson KE, Dimon MT, Marinotti O, James AA (2011). "RNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegypti". BMC Genomics. 12: 82. doi:10.1186/1471-2164-12-82. PMC 3042412. PMID 21276245.
Pinto SB, Lombardo F, Koutsos AC, Waterhouse RM, McKay K, An C, Ramakrishnan C, Kafatos FC, Michel K (2009). "Discovery of Plasmodium modulators by genome-wide analysis of circulating hemocytes in Anopheles gambiae". Proc Natl Acad Sci U S A. 106 (50): 21270–5. Bibcode:2009PNAS..10621270P. doi:10.1073/pnas.0909463106. PMC 2783009. PMID 19940242.
Bartholomay LC, Waterhouse RM, Mayhew GF, Campbell CL, Michel K, Zou Z, Ramirez JL, Das S, Alvarez K, Arensburger P, Bryant B, Chapman SB, Dong Y, Erickson SM, Karunaratne SH, Kokoza V, Kodira CD, Pignatelli P, Shin SW, Vanlandingham DL, Atkinson PW, Birren B, Christophides GK, Clem RJ, Hemingway J, Higgs S, Megy K, Ranson H, Zdobnov EM, Raikhel AS, Christensen BM, Dimopoulos G, Muskavitch MA (2010). "Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens". Science. 330 (6000): 88–90. Bibcode:2010Sci...330...88B. doi:10.1126/science.1193162. PMC 3104938. PMID 20929811.
Lemay DG, Lynn DJ, Martin WF, Neville MC, Casey TM, Rincon G, Kriventseva EV, Barris WC, Hinrichs AS, Molenaar AJ, Pollard KS, Maqbool NJ, Singh K, Murney R, Zdobnov EM, Tellam RL, Medrano JF, German JB, Rijnkels M (2009). "The bovine lactation genome: insights into the evolution of mammalian milk". Genome Biol. 10 (4): R43. doi:10.1186/gb-2009-10-4-r43. PMC 2688934. PMID 19393040.
Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ (January 2015). "Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes". Science. 347 (6217): 62176. Bibcode:2015Sci...347...43N. doi:10.1126/science.1258522. PMC 4380271. PMID 25554792.
Boeckmann B, Robinson-Rechavi M, Xenarios I, Dessimoz C (September 2011). "Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees". Brief. Bioinform. 12 (5): 423–35. doi:10.1093/bib/bbr034. PMC 3178055. PMID 21737420.
http://eggnog.embl.de/orthobench OrthoBench]
Trachana K, Larsson TA, Powell S, Chen WH, Doerks T, Muller J, Bork P (October 2011). "Orthology prediction methods: a quality assessment using curated protein families". BioEssays. 33 (10): 769–80. doi:10.1002/bies.201100062. PMC 3193375. PMID 21853451.
Simão FA, Waterhouse RM, Ioannidis P, Kriventseva EV, Zdobnov EM (June 2015). "BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs". Bioinformatics. 31 (19): 3210–2. doi:10.1093/bioinformatics/btv351. PMID 26059717.

embl.de

eggnog.embl.de

http://eggnog.embl.de/orthobench OrthoBench]
Trachana K, Larsson TA, Powell S, Chen WH, Doerks T, Muller J, Bork P (October 2011). "Orthology prediction methods: a quality assessment using curated protein families". BioEssays. 33 (10): 769–80. doi:10.1002/bies.201100062. PMC 3193375. PMID 21853451.

harvard.edu

ui.adsabs.harvard.edu

Behura SK, Haugen M, Flannery E, Sarro J, Tessier CR, Severson DW, Duman-Scheel M (2011). "Comparative Genomic Analysis of Drosophila melanogaster and Vector Mosquito Developmental Genes". PLOS ONE. 6 (7): e21504. Bibcode:2011PLoSO...621504B. doi:10.1371/journal.pone.0021504. PMC 3130749. PMID 21754989.
Pinto SB, Lombardo F, Koutsos AC, Waterhouse RM, McKay K, An C, Ramakrishnan C, Kafatos FC, Michel K (2009). "Discovery of Plasmodium modulators by genome-wide analysis of circulating hemocytes in Anopheles gambiae". Proc Natl Acad Sci U S A. 106 (50): 21270–5. Bibcode:2009PNAS..10621270P. doi:10.1073/pnas.0909463106. PMC 2783009. PMID 19940242.
Bartholomay LC, Waterhouse RM, Mayhew GF, Campbell CL, Michel K, Zou Z, Ramirez JL, Das S, Alvarez K, Arensburger P, Bryant B, Chapman SB, Dong Y, Erickson SM, Karunaratne SH, Kokoza V, Kodira CD, Pignatelli P, Shin SW, Vanlandingham DL, Atkinson PW, Birren B, Christophides GK, Clem RJ, Hemingway J, Higgs S, Megy K, Ranson H, Zdobnov EM, Raikhel AS, Christensen BM, Dimopoulos G, Muskavitch MA (2010). "Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens". Science. 330 (6000): 88–90. Bibcode:2010Sci...330...88B. doi:10.1126/science.1193162. PMC 3104938. PMID 20929811.
Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ (January 2015). "Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes". Science. 347 (6217): 62176. Bibcode:2015Sci...347...43N. doi:10.1126/science.1258522. PMC 4380271. PMID 25554792.

nih.gov

pubmed.ncbi.nlm.nih.gov

Kriventseva EV, Tegenfeldt F, Petty TJ, Waterhouse RM, Simão FA, Pozdnyakov IA, Ioannidis P, Zdobnov EM (January 2015). "OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software". Nucleic Acids Res. 43 (Database issue): D250–6. doi:10.1093/nar/gku1220. PMC 4383991. PMID 25428351.
Waterhouse RM, Tegenfeldt F, Li J, Zdobnov EM, Kriventseva EV (January 2013). "OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs". Nucleic Acids Res. 41 (Database issue): D358–65. doi:10.1093/nar/gks1116. PMC 3531149. PMID 23180791.
Waterhouse RM, Zdobnov EM, Tegenfeldt F, Li J, Kriventseva EV (January 2011). "OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011". Nucleic Acids Res. 39 (Database issue): D283–8. doi:10.1093/nar/gkq930. PMC 3013786. PMID 20972218.
Kriventseva EV, Rahman N, Espinosa O, Zdobnov EM (Jan 2008). "OrthoDB: the hierarchical catalog of eukaryotic orthologs". Nucleic Acids Res. 36 (Database issue): D271–5. doi:10.1093/nar/gkm845. PMC 2238902. PMID 17947323.
Waterhouse RM, Zdobnov EM, Kriventseva EV (January 2011). "Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi". Genome Biol. Evol. 3: 75–86. doi:10.1093/gbe/evq083. PMC 3030422. PMID 21148284.
Hase T, Niimura Y, Tanaka H (2010). "Difference in gene duplicability may explain the difference in overall structure of protein-protein interaction networks among eukaryotes". BMC Evol. Biol. 10: 358. doi:10.1186/1471-2148-10-358. PMC 2994879. PMID 21087510.
Behura SK, Haugen M, Flannery E, Sarro J, Tessier CR, Severson DW, Duman-Scheel M (2011). "Comparative Genomic Analysis of Drosophila melanogaster and Vector Mosquito Developmental Genes". PLOS ONE. 6 (7): e21504. Bibcode:2011PLoSO...621504B. doi:10.1371/journal.pone.0021504. PMC 3130749. PMID 21754989.
Bonizzoni M, Dunn WA, Campbell CL, Olson KE, Dimon MT, Marinotti O, James AA (2011). "RNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegypti". BMC Genomics. 12: 82. doi:10.1186/1471-2164-12-82. PMC 3042412. PMID 21276245.
Pinto SB, Lombardo F, Koutsos AC, Waterhouse RM, McKay K, An C, Ramakrishnan C, Kafatos FC, Michel K (2009). "Discovery of Plasmodium modulators by genome-wide analysis of circulating hemocytes in Anopheles gambiae". Proc Natl Acad Sci U S A. 106 (50): 21270–5. Bibcode:2009PNAS..10621270P. doi:10.1073/pnas.0909463106. PMC 2783009. PMID 19940242.
Bartholomay LC, Waterhouse RM, Mayhew GF, Campbell CL, Michel K, Zou Z, Ramirez JL, Das S, Alvarez K, Arensburger P, Bryant B, Chapman SB, Dong Y, Erickson SM, Karunaratne SH, Kokoza V, Kodira CD, Pignatelli P, Shin SW, Vanlandingham DL, Atkinson PW, Birren B, Christophides GK, Clem RJ, Hemingway J, Higgs S, Megy K, Ranson H, Zdobnov EM, Raikhel AS, Christensen BM, Dimopoulos G, Muskavitch MA (2010). "Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens". Science. 330 (6000): 88–90. Bibcode:2010Sci...330...88B. doi:10.1126/science.1193162. PMC 3104938. PMID 20929811.
Lemay DG, Lynn DJ, Martin WF, Neville MC, Casey TM, Rincon G, Kriventseva EV, Barris WC, Hinrichs AS, Molenaar AJ, Pollard KS, Maqbool NJ, Singh K, Murney R, Zdobnov EM, Tellam RL, Medrano JF, German JB, Rijnkels M (2009). "The bovine lactation genome: insights into the evolution of mammalian milk". Genome Biol. 10 (4): R43. doi:10.1186/gb-2009-10-4-r43. PMC 2688934. PMID 19393040.
Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ (January 2015). "Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes". Science. 347 (6217): 62176. Bibcode:2015Sci...347...43N. doi:10.1126/science.1258522. PMC 4380271. PMID 25554792.
Boeckmann B, Robinson-Rechavi M, Xenarios I, Dessimoz C (September 2011). "Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees". Brief. Bioinform. 12 (5): 423–35. doi:10.1093/bib/bbr034. PMC 3178055. PMID 21737420.
http://eggnog.embl.de/orthobench OrthoBench]
Trachana K, Larsson TA, Powell S, Chen WH, Doerks T, Muller J, Bork P (October 2011). "Orthology prediction methods: a quality assessment using curated protein families". BioEssays. 33 (10): 769–80. doi:10.1002/bies.201100062. PMC 3193375. PMID 21853451.
Simão FA, Waterhouse RM, Ioannidis P, Kriventseva EV, Zdobnov EM (June 2015). "BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs". Bioinformatics. 31 (19): 3210–2. doi:10.1093/bioinformatics/btv351. PMID 26059717.

ncbi.nlm.nih.gov

Kriventseva EV, Tegenfeldt F, Petty TJ, Waterhouse RM, Simão FA, Pozdnyakov IA, Ioannidis P, Zdobnov EM (January 2015). "OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software". Nucleic Acids Res. 43 (Database issue): D250–6. doi:10.1093/nar/gku1220. PMC 4383991. PMID 25428351.
Waterhouse RM, Tegenfeldt F, Li J, Zdobnov EM, Kriventseva EV (January 2013). "OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs". Nucleic Acids Res. 41 (Database issue): D358–65. doi:10.1093/nar/gks1116. PMC 3531149. PMID 23180791.
Waterhouse RM, Zdobnov EM, Tegenfeldt F, Li J, Kriventseva EV (January 2011). "OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011". Nucleic Acids Res. 39 (Database issue): D283–8. doi:10.1093/nar/gkq930. PMC 3013786. PMID 20972218.
Kriventseva EV, Rahman N, Espinosa O, Zdobnov EM (Jan 2008). "OrthoDB: the hierarchical catalog of eukaryotic orthologs". Nucleic Acids Res. 36 (Database issue): D271–5. doi:10.1093/nar/gkm845. PMC 2238902. PMID 17947323.
Waterhouse RM, Zdobnov EM, Kriventseva EV (January 2011). "Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi". Genome Biol. Evol. 3: 75–86. doi:10.1093/gbe/evq083. PMC 3030422. PMID 21148284.
Hase T, Niimura Y, Tanaka H (2010). "Difference in gene duplicability may explain the difference in overall structure of protein-protein interaction networks among eukaryotes". BMC Evol. Biol. 10: 358. doi:10.1186/1471-2148-10-358. PMC 2994879. PMID 21087510.
Behura SK, Haugen M, Flannery E, Sarro J, Tessier CR, Severson DW, Duman-Scheel M (2011). "Comparative Genomic Analysis of Drosophila melanogaster and Vector Mosquito Developmental Genes". PLOS ONE. 6 (7): e21504. Bibcode:2011PLoSO...621504B. doi:10.1371/journal.pone.0021504. PMC 3130749. PMID 21754989.
Bonizzoni M, Dunn WA, Campbell CL, Olson KE, Dimon MT, Marinotti O, James AA (2011). "RNA-seq analyses of blood-induced changes in gene expression in the mosquito vector species, Aedes aegypti". BMC Genomics. 12: 82. doi:10.1186/1471-2164-12-82. PMC 3042412. PMID 21276245.
Pinto SB, Lombardo F, Koutsos AC, Waterhouse RM, McKay K, An C, Ramakrishnan C, Kafatos FC, Michel K (2009). "Discovery of Plasmodium modulators by genome-wide analysis of circulating hemocytes in Anopheles gambiae". Proc Natl Acad Sci U S A. 106 (50): 21270–5. Bibcode:2009PNAS..10621270P. doi:10.1073/pnas.0909463106. PMC 2783009. PMID 19940242.
Bartholomay LC, Waterhouse RM, Mayhew GF, Campbell CL, Michel K, Zou Z, Ramirez JL, Das S, Alvarez K, Arensburger P, Bryant B, Chapman SB, Dong Y, Erickson SM, Karunaratne SH, Kokoza V, Kodira CD, Pignatelli P, Shin SW, Vanlandingham DL, Atkinson PW, Birren B, Christophides GK, Clem RJ, Hemingway J, Higgs S, Megy K, Ranson H, Zdobnov EM, Raikhel AS, Christensen BM, Dimopoulos G, Muskavitch MA (2010). "Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens". Science. 330 (6000): 88–90. Bibcode:2010Sci...330...88B. doi:10.1126/science.1193162. PMC 3104938. PMID 20929811.
Lemay DG, Lynn DJ, Martin WF, Neville MC, Casey TM, Rincon G, Kriventseva EV, Barris WC, Hinrichs AS, Molenaar AJ, Pollard KS, Maqbool NJ, Singh K, Murney R, Zdobnov EM, Tellam RL, Medrano JF, German JB, Rijnkels M (2009). "The bovine lactation genome: insights into the evolution of mammalian milk". Genome Biol. 10 (4): R43. doi:10.1186/gb-2009-10-4-r43. PMC 2688934. PMID 19393040.
Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, Brockman AI, Burkot TR, Burt A, Chan CS, Chauve C, Chiu JC, Christensen M, Costantini C, Davidson VL, Deligianni E, Dottorini T, Dritsou V, Gabriel SB, Guelbeogo WM, Hall AB, Han MV, Hlaing T, Hughes DS, Jenkins AM, Jiang X, Jungreis I, Kakani EG, Kamali M, Kemppainen P, Kennedy RC, Kirmitzoglou IK, Koekemoer LL, Laban N, Langridge N, Lawniczak MK, Lirakis M, Lobo NF, Lowy E, MacCallum RM, Mao C, Maslen G, Mbogo C, McCarthy J, Michel K, Mitchell SN, Moore W, Murphy KA, Naumenko AN, Nolan T, Novoa EM, O'Loughlin S, Oringanje C, Oshaghi MA, Pakpour N, Papathanos PA, Peery AN, Povelones M, Prakash A, Price DP, Rajaraman A, Reimer LJ, Rinker DC, Rokas A, Russell TL, Sagnon N, Sharakhova MV, Shea T, Simão FA, Simard F, Slotman MA, Somboon P, Stegniy V, Struchiner CJ, Thomas GW, Tojo M, Topalis P, Tubio JM, Unger MF, Vontas J, Walton C, Wilding CS, Willis JH, Wu YC, Yan G, Zdobnov EM, Zhou X, Catteruccia F, Christophides GK, Collins FH, Cornman RS, Crisanti A, Donnelly MJ, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Hansen IA, Howell PI, Kafatos FC, Kellis M, Lawson D, Louis C, Luckhart S, Muskavitch MA, Ribeiro JM, Riehle MA, Sharakhov IV, Tu Z, Zwiebel LJ, Besansky NJ (January 2015). "Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes". Science. 347 (6217): 62176. Bibcode:2015Sci...347...43N. doi:10.1126/science.1258522. PMC 4380271. PMID 25554792.
Boeckmann B, Robinson-Rechavi M, Xenarios I, Dessimoz C (September 2011). "Conceptual framework and pilot study to benchmark phylogenomic databases based on reference gene trees". Brief. Bioinform. 12 (5): 423–35. doi:10.1093/bib/bbr034. PMC 3178055. PMID 21737420.
http://eggnog.embl.de/orthobench OrthoBench]
Trachana K, Larsson TA, Powell S, Chen WH, Doerks T, Muller J, Bork P (October 2011). "Orthology prediction methods: a quality assessment using curated protein families". BioEssays. 33 (10): 769–80. doi:10.1002/bies.201100062. PMC 3193375. PMID 21853451.