Pneumocystis jirovecii (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Pneumocystis jirovecii" in English language version.

refsWebsite

Global rank English rank

23nih.gov

4^th place

18doi.org

2^nd place

3semanticscholar.org

11^th place

8^th place

2harvard.edu

18^th place

17^th place

2cdc.gov

218^th place

212^th place

1web.archive.org

1^st place

1handle.net

102^nd place

76^th place

1sav.sk

low place

1iapt-taxon.org

7,945^th place

6,470^th place

1cchmc.org

low place

1jstor.org

26^th place

20^th place

cchmc.org (Global: low place; English: low place)

pgp.cchmc.org

"Pneumocystis Genome Project". Pgp.cchmc.org. Retrieved 2013-03-26.

cdc.gov (Global: 218^th place; English: 212^th place)

dpd.cdc.gov

"see DPDx life-cycle diagram". Dpd.cdc.gov. Archived from the original on 2013-03-18. Retrieved 2013-03-26.

cdc.gov

Stringer JR, Beard CB, Miller RF (2009). "Spelling Pneumocystis jiroveci" (PDF). Emerging Infectious Diseases. 15 (3): 506a–506. doi:10.3201/eid1503.081060. PMC 2681121. PMID 19239784.

doi.org (Global: 2^nd place; English: 2^nd place)

James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, et al. (2006). "Reconstructing the early evolution of Fungi using a six-gene phylogeny". Nature. 443 (7113): 818–822. Bibcode:2006Natur.443..818J. doi:10.1038/nature05110. PMID 17051209. S2CID 4302864.
Richard S, Almeida JM, Cissé OH, Luraschi A, Nielsen O, Pagni M, Hauser PM (2018). "Functional and Expression Analyses of the Pneumocystis MAT Genes Suggest Obligate Sexuality through Primary Homothallism within Host Lungs". mBio. 9 (1) e02201-17. doi:10.1128/mBio.02201-17. PMC 5821091. PMID 29463658.
Ponce CA, Gallo M, Bustamante R, Vargas SL (2010). "Pneumocystis colonization is highly prevalent in the autopsied lungs of the general population". Clin Infect Dis. 50 (3): 347–353. doi:10.1086/649868. hdl:10533/141355. PMID 20047487.
Stringer JR, Beard CB, Miller RF, Wakefield AE (2002). "A New Name for Pneumocystis from Humans and New Perspectives on the Host-Pathogen Relationship". Emerging Infectious Diseases. 8 (9): 891–6. doi:10.3201/eid0809.020096. PMC 2732539. PMID 12194762.
Stringer JR, Beard CB, Miller RF (2009). "Spelling Pneumocystis jiroveci" (PDF). Emerging Infectious Diseases. 15 (3): 506a–506. doi:10.3201/eid1503.081060. PMC 2681121. PMID 19239784.
Redhead SA, Cushion MT, Frenkel JK, Stringer JR (2006). "Pneumocystis and Trypanosoma cruzi: nomenclature and typifications". J Eukaryot Microbiol. 53 (1): 2–11. doi:10.1111/j.1550-7408.2005.00072.x. PMID 16441572. S2CID 38119833.
Cisse, O. H; Pagni, M; Hauser, P. M (2012). "De Novo Assembly of the Pneumocystis jirovecii Genome from a Single Bronchoalveolar Lavage Fluid Specimen from a Patient". mBio. 4 (1): e00428–12. doi:10.1128/mBio.00428-12. PMC 3531804. PMID 23269827.
Chagas C (1909). "Nova tripanozomiase humana: Estudos sobre a morfolojia e o ciclo evolutivo do Schizotrypanum cruzi n. gen., n. sp., ajente etiolojico de nova entidade morbida do homem". Mem Inst Oswaldo Cruz. 1 (2): 159–218. doi:10.1590/S0074-02761909000200008.
Gajdusek DC (1957). "Pneumocystis carinii; etiologic agent of interstitial plasma cell pneumonia of premature and young infants". Pediatrics. 19 (4 Pt 1): 543–65. doi:10.1542/peds.19.4.543. PMID 13419426. S2CID 19507186.
Gigliotti F (2005). "Pneumocystis carinii: has the name really been changed?". Clin Infect Dis. 41 (12): 1752–5. doi:10.1086/498150. PMID 16288399.
Hawksworth DL (2007). "Responsibility in naming pathogens: the case of Pneumocystis jiroveci, the causal agent of pneumocystis pneumonia". Lancet Infect. Dis. 7 (1): 3–5. doi:10.1016/S1473-3099(06)70663-6. PMID 17182335.
Hugot J, Demanche C, Barriel V, Dei-Cas E, Guillot J (2003). "Phylogenetic systematics and evolution of primate-derived Pneumocystis based on mitochondrial or nuclear DNA sequence comparison". Syst Biol. 52 (6): 735–744. doi:10.1080/10635150390250893. PMID 14668114.
Keely S, Fischer J, Cushion M, Stringer J (2004). "Phylogenetic identification of Pneumocystis murina sp. nov., a new species in laboratory mice". Microbiology. 150 (Pt 5): 1153–65. doi:10.1099/mic.0.26921-0. PMID 15133075.
Cushion MT, Keely SP, Stringer JR (2004). "Molecular and phenotypic description of Pneumocystis wakefieldiae sp. nov., a new species in rats". Mycologia. 96 (3): 429–438. doi:10.2307/3762163. JSTOR 3762163. PMID 21148866.
Cushion MT, Keely SP, Stringer JR (2005). "Validation of the name Pneumocystis wakefieldiae". Mycologia. 97: 268. doi:10.3852/mycologia.97.1.268.
Dei-Cas E, et al. (2006). "Pneumocystis oryctolagi sp. nov., an uncultured fungus causing pneumonia in rabbits at weaning: review of current knowledge, and description of a new taxon on genotypic, phylogenetic and phenotypic bases". FEMS Microbiol. Rev. 30 (6): 853–871. doi:10.1111/j.1574-6976.2006.00037.x. PMID 17064284.
Aliouat-Denis, C-M.; et al. (2008). "Pneumocystis species, co-evolution and pathogenic power". Infection, Genetics and Evolution. 8 (5): 708–726. Bibcode:2008InfGE...8..708A. doi:10.1016/j.meegid.2008.05.001. PMID 18565802.
Demanche C, et al. (2001). "Phylogeny of Pneumocystis carinii from 18 Primate Species Confirms Host Specificity and Suggests Coevolution". J. Clin. Microbiol. 39 (6): 2126–2133. doi:10.1128/JCM.39.6.2126-2133.2001. PMC 88100. PMID 11376046.

handle.net (Global: 102^nd place; English: 76^th place)

hdl.handle.net

Ponce CA, Gallo M, Bustamante R, Vargas SL (2010). "Pneumocystis colonization is highly prevalent in the autopsied lungs of the general population". Clin Infect Dis. 50 (3): 347–353. doi:10.1086/649868. hdl:10533/141355. PMID 20047487.

harvard.edu (Global: 18^th place; English: 17^th place)

ui.adsabs.harvard.edu

James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, et al. (2006). "Reconstructing the early evolution of Fungi using a six-gene phylogeny". Nature. 443 (7113): 818–822. Bibcode:2006Natur.443..818J. doi:10.1038/nature05110. PMID 17051209. S2CID 4302864.
Aliouat-Denis, C-M.; et al. (2008). "Pneumocystis species, co-evolution and pathogenic power". Infection, Genetics and Evolution. 8 (5): 708–726. Bibcode:2008InfGE...8..708A. doi:10.1016/j.meegid.2008.05.001. PMID 18565802.

iapt-taxon.org (Global: 7,945^th place; English: 6,470^th place)

"International Code of Nomenclature for algae, fungi, and plants". www.iapt-taxon.org.

jstor.org (Global: 26^th place; English: 20^th place)

Cushion MT, Keely SP, Stringer JR (2004). "Molecular and phenotypic description of Pneumocystis wakefieldiae sp. nov., a new species in rats". Mycologia. 96 (3): 429–438. doi:10.2307/3762163. JSTOR 3762163. PMID 21148866.

nih.gov (Global: 4^th place; English: 4^th place)

pubmed.ncbi.nlm.nih.gov

James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, et al. (2006). "Reconstructing the early evolution of Fungi using a six-gene phylogeny". Nature. 443 (7113): 818–822. Bibcode:2006Natur.443..818J. doi:10.1038/nature05110. PMID 17051209. S2CID 4302864.
Richard S, Almeida JM, Cissé OH, Luraschi A, Nielsen O, Pagni M, Hauser PM (2018). "Functional and Expression Analyses of the Pneumocystis MAT Genes Suggest Obligate Sexuality through Primary Homothallism within Host Lungs". mBio. 9 (1) e02201-17. doi:10.1128/mBio.02201-17. PMC 5821091. PMID 29463658.
Ponce CA, Gallo M, Bustamante R, Vargas SL (2010). "Pneumocystis colonization is highly prevalent in the autopsied lungs of the general population". Clin Infect Dis. 50 (3): 347–353. doi:10.1086/649868. hdl:10533/141355. PMID 20047487.
Stringer JR, Beard CB, Miller RF, Wakefield AE (2002). "A New Name for Pneumocystis from Humans and New Perspectives on the Host-Pathogen Relationship". Emerging Infectious Diseases. 8 (9): 891–6. doi:10.3201/eid0809.020096. PMC 2732539. PMID 12194762.
Stringer JR, Beard CB, Miller RF (2009). "Spelling Pneumocystis jiroveci" (PDF). Emerging Infectious Diseases. 15 (3): 506a–506. doi:10.3201/eid1503.081060. PMC 2681121. PMID 19239784.
Redhead SA, Cushion MT, Frenkel JK, Stringer JR (2006). "Pneumocystis and Trypanosoma cruzi: nomenclature and typifications". J Eukaryot Microbiol. 53 (1): 2–11. doi:10.1111/j.1550-7408.2005.00072.x. PMID 16441572. S2CID 38119833.
Cisse, O. H; Pagni, M; Hauser, P. M (2012). "De Novo Assembly of the Pneumocystis jirovecii Genome from a Single Bronchoalveolar Lavage Fluid Specimen from a Patient". mBio. 4 (1): e00428–12. doi:10.1128/mBio.00428-12. PMC 3531804. PMID 23269827.
Vanek J, Jírovec O, Lukes J (1953). "Interstitial plasma cell pneumonia in infants". Annales Paediatrici. 180 (1): 1–21. PMID 13051050.
Gajdusek DC (1957). "Pneumocystis carinii; etiologic agent of interstitial plasma cell pneumonia of premature and young infants". Pediatrics. 19 (4 Pt 1): 543–65. doi:10.1542/peds.19.4.543. PMID 13419426. S2CID 19507186.
Frenkel JK (1976). "Pneumocystis jiroveci n. sp. from man: morphology, physiology, and immunology in relation to pathology". Natl Cancer Inst Monogr. 43: 13–27. PMID 828240.
Gigliotti F (2005). "Pneumocystis carinii: has the name really been changed?". Clin Infect Dis. 41 (12): 1752–5. doi:10.1086/498150. PMID 16288399.
Hawksworth DL (2007). "Responsibility in naming pathogens: the case of Pneumocystis jiroveci, the causal agent of pneumocystis pneumonia". Lancet Infect. Dis. 7 (1): 3–5. doi:10.1016/S1473-3099(06)70663-6. PMID 17182335.
Hugot J, Demanche C, Barriel V, Dei-Cas E, Guillot J (2003). "Phylogenetic systematics and evolution of primate-derived Pneumocystis based on mitochondrial or nuclear DNA sequence comparison". Syst Biol. 52 (6): 735–744. doi:10.1080/10635150390250893. PMID 14668114.
Keely S, Fischer J, Cushion M, Stringer J (2004). "Phylogenetic identification of Pneumocystis murina sp. nov., a new species in laboratory mice". Microbiology. 150 (Pt 5): 1153–65. doi:10.1099/mic.0.26921-0. PMID 15133075.
Cushion MT, Keely SP, Stringer JR (2004). "Molecular and phenotypic description of Pneumocystis wakefieldiae sp. nov., a new species in rats". Mycologia. 96 (3): 429–438. doi:10.2307/3762163. JSTOR 3762163. PMID 21148866.
Dei-Cas E, et al. (2006). "Pneumocystis oryctolagi sp. nov., an uncultured fungus causing pneumonia in rabbits at weaning: review of current knowledge, and description of a new taxon on genotypic, phylogenetic and phenotypic bases". FEMS Microbiol. Rev. 30 (6): 853–871. doi:10.1111/j.1574-6976.2006.00037.x. PMID 17064284.
Aliouat-Denis, C-M.; et al. (2008). "Pneumocystis species, co-evolution and pathogenic power". Infection, Genetics and Evolution. 8 (5): 708–726. Bibcode:2008InfGE...8..708A. doi:10.1016/j.meegid.2008.05.001. PMID 18565802.
Demanche C, et al. (2001). "Phylogeny of Pneumocystis carinii from 18 Primate Species Confirms Host Specificity and Suggests Coevolution". J. Clin. Microbiol. 39 (6): 2126–2133. doi:10.1128/JCM.39.6.2126-2133.2001. PMC 88100. PMID 11376046.

ncbi.nlm.nih.gov

Richard S, Almeida JM, Cissé OH, Luraschi A, Nielsen O, Pagni M, Hauser PM (2018). "Functional and Expression Analyses of the Pneumocystis MAT Genes Suggest Obligate Sexuality through Primary Homothallism within Host Lungs". mBio. 9 (1) e02201-17. doi:10.1128/mBio.02201-17. PMC 5821091. PMID 29463658.
Stringer JR, Beard CB, Miller RF, Wakefield AE (2002). "A New Name for Pneumocystis from Humans and New Perspectives on the Host-Pathogen Relationship". Emerging Infectious Diseases. 8 (9): 891–6. doi:10.3201/eid0809.020096. PMC 2732539. PMID 12194762.
Stringer JR, Beard CB, Miller RF (2009). "Spelling Pneumocystis jiroveci" (PDF). Emerging Infectious Diseases. 15 (3): 506a–506. doi:10.3201/eid1503.081060. PMC 2681121. PMID 19239784.
Cisse, O. H; Pagni, M; Hauser, P. M (2012). "De Novo Assembly of the Pneumocystis jirovecii Genome from a Single Bronchoalveolar Lavage Fluid Specimen from a Patient". mBio. 4 (1): e00428–12. doi:10.1128/mBio.00428-12. PMC 3531804. PMID 23269827.
Demanche C, et al. (2001). "Phylogeny of Pneumocystis carinii from 18 Primate Species Confirms Host Specificity and Suggests Coevolution". J. Clin. Microbiol. 39 (6): 2126–2133. doi:10.1128/JCM.39.6.2126-2133.2001. PMC 88100. PMID 11376046.

sav.sk (Global: low place; English: low place)

ibot.sav.sk

"ICBN Recommendation 60C.1". If the personal name ends with a consonant (except -er), substantival epithets are formed by adding -i- (stem augmentation) plus the genitive inflection appropriate to the sex and number of the person(s) honoured (e.g. lecardii for Théodore Lecard).

semanticscholar.org (Global: 11^th place; English: 8^th place)

api.semanticscholar.org

James TY, Kauff F, Schoch CL, Matheny PB, Hofstetter V, Cox CJ, et al. (2006). "Reconstructing the early evolution of Fungi using a six-gene phylogeny". Nature. 443 (7113): 818–822. Bibcode:2006Natur.443..818J. doi:10.1038/nature05110. PMID 17051209. S2CID 4302864.
Redhead SA, Cushion MT, Frenkel JK, Stringer JR (2006). "Pneumocystis and Trypanosoma cruzi: nomenclature and typifications". J Eukaryot Microbiol. 53 (1): 2–11. doi:10.1111/j.1550-7408.2005.00072.x. PMID 16441572. S2CID 38119833.
Gajdusek DC (1957). "Pneumocystis carinii; etiologic agent of interstitial plasma cell pneumonia of premature and young infants". Pediatrics. 19 (4 Pt 1): 543–65. doi:10.1542/peds.19.4.543. PMID 13419426. S2CID 19507186.

web.archive.org (Global: 1^st place; English: 1^st place)

"see DPDx life-cycle diagram". Dpd.cdc.gov. Archived from the original on 2013-03-18. Retrieved 2013-03-26.