Position weight matrix (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Position weight matrix" in English language version.

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Nishida, K.; Frith, M. C.; Nakai, K. (23 December 2008). "Pseudocounts for transcription factor binding sites". Nucleic Acids Research. 37 (3): 939–944. doi:10.1093/nar/gkn1019. PMC 2647310. PMID 19106141.
Erill I, O'Neill MC (2009). "A reexamination of information theory-based methods for DNA-binding site identification". BMC Bioinformatics. 10: 57. doi:10.1186/1471-2105-10-57. PMC 2680408. PMID 19210776.
Kel AE, et al. (2003). "MATCHTM: a tool for searching transcription factor binding sites in DNA sequences". Nucleic Acids Research. 31 (13): 3576–3579. doi:10.1093/nar/gkg585. PMC 169193. PMID 12824369.
Wrzodek, Clemens; Schröder, Adrian; Dräger, Andreas; Wanke, Dierk; Berendzen, Kenneth W.; Kronfeld, Marcel; Harter, Klaus; Zell, Andreas (9 October 2009). "ModuleMaster: A new tool to decipher transcriptional regulatory networks". Biosystems. 99 (1): 79–81. doi:10.1016/j.biosystems.2009.09.005. ISSN 0303-2647. PMID 19819296.
Beckstette, M.; et al. (2006). "Fast index based algorithms and software for matching position specific scoring matrices". BMC Bioinformatics. 7: 389. doi:10.1186/1471-2105-7-389. PMC 1635428. PMID 16930469.

Nishida, K.; Frith, M. C.; Nakai, K. (23 December 2008). "Pseudocounts for transcription factor binding sites". Nucleic Acids Research. 37 (3): 939–944. doi:10.1093/nar/gkn1019. PMC 2647310. PMID 19106141.
Aleksandrushkina NI, Egorova LA (1978). "Nucleotide makeup of the DNA of thermophilic bacteria of the genus Thermus". Mikrobiologiia. 47 (2): 250–2. PMID 661633.
Erill I, O'Neill MC (2009). "A reexamination of information theory-based methods for DNA-binding site identification". BMC Bioinformatics. 10: 57. doi:10.1186/1471-2105-10-57. PMC 2680408. PMID 19210776.
Kel AE, et al. (2003). "MATCHTM: a tool for searching transcription factor binding sites in DNA sequences". Nucleic Acids Research. 31 (13): 3576–3579. doi:10.1093/nar/gkg585. PMC 169193. PMID 12824369.
Wrzodek, Clemens; Schröder, Adrian; Dräger, Andreas; Wanke, Dierk; Berendzen, Kenneth W.; Kronfeld, Marcel; Harter, Klaus; Zell, Andreas (9 October 2009). "ModuleMaster: A new tool to decipher transcriptional regulatory networks". Biosystems. 99 (1): 79–81. doi:10.1016/j.biosystems.2009.09.005. ISSN 0303-2647. PMID 19819296.
Beckstette, M.; et al. (2006). "Fast index based algorithms and software for matching position specific scoring matrices". BMC Bioinformatics. 7: 389. doi:10.1186/1471-2105-7-389. PMC 1635428. PMID 16930469.

Kim, Seyoung; Chikina, Maria. "PSC103 Spring 2016 / HMMs and biological sequence analysis" (PDF). csb.pitt.edu. Retrieved 14 December 2023.

Guigo, Roderic. "An Introduction to Position Specific Scoring Matrices". bioinformatica.upf.edu. Retrieved 12 November 2013.

Wrzodek, Clemens; Schröder, Adrian; Dräger, Andreas; Wanke, Dierk; Berendzen, Kenneth W.; Kronfeld, Marcel; Harter, Klaus; Zell, Andreas (9 October 2009). "ModuleMaster: A new tool to decipher transcriptional regulatory networks". Biosystems. 99 (1): 79–81. doi:10.1016/j.biosystems.2009.09.005. ISSN 0303-2647. PMID 19819296.