Analysis of information sources in references of the Wikipedia article "Prehistoric demography" in English language version.
The relationship between census size and effective size is complex, but arguments based on an island model of migration show that if the effective population size reflects the number of breeding individuals and the effects of population subdivision, then an effective population size of 10,000 is inconsistent with the census size of 500,000 to 1,000,000 that has been suggested by archeological evidence. However, these models have ignored the effects of population extinction and recolonization, which increase the expected variance among demes and reduce the inbreeding effective population size. Using models developed for population extinction and recolonization, we show that a large census size consistent with the multiregional model can be reconciled with an effective population size of 10,000, but genetic variation among demes must be high, reflecting low interdeme migration rates and a colonization process that involves a small number of colonists or kin-structured colonization.
The maximum preexpansion population size for the NorthCentral African population is 6,600, the lower bound for the postexpansion population size is 8,400, and the allowed dates are between 49,000 and 640,000 years ago
The relationship between census size and effective size is complex, but arguments based on an island model of migration show that if the effective population size reflects the number of breeding individuals and the effects of population subdivision, then an effective population size of 10,000 is inconsistent with the census size of 500,000 to 1,000,000 that has been suggested by archeological evidence. However, these models have ignored the effects of population extinction and recolonization, which increase the expected variance among demes and reduce the inbreeding effective population size. Using models developed for population extinction and recolonization, we show that a large census size consistent with the multiregional model can be reconciled with an effective population size of 10,000, but genetic variation among demes must be high, reflecting low interdeme migration rates and a colonization process that involves a small number of colonists or kin-structured colonization.
A small human effective population size, on the order of 10,000 individuals, which is smaller than the effective population size of most great apes, has been interpreted as a result of a very long history, starting ? 2 mya, of a small population size, coined as the long-necked bottle model (Harpending et al. 1998; Hawks et al. 2000). Our findings are consistent with this hypothesis, but, depending on the mutation rate, we find either an effective population size of NA = 12,000 (95% C.I. = 9,000–15,500 when averaging over all three demographic models) using the mutation rate calibrated with the human-chimp divergence or an effective population size of NA = 32,500 individuals (95% C.I. = 27,500–34,500) using the mutation rate given by whole-genome trio analysis (The 1000 Genomes Project Consortium 2010) (supplementary figure 4 and table 6, Supplementary Material online). Not surprisingly, the estimated effective mutation rates ? = 4NAµ are comparable for the two mutation rates we considered, and are equal to 1.4 × 10?3/bp/generation (95% C.I. = (1.1–1.7) × 10?3). Relating the estimated effective population size to the census population size during the Pleistocene is a difficult task because there are many factors affecting the effective population size (Charlesworth 2009). Nevertheless, based on published estimates of the ratio between effective and census population size, a comprehensive value on the order of 10% has been found by Frankham (1995). This 10% rule roughly predicts that 120,000–325,[0]00 individuals (depending on the assumed mutation rate)
The maximum preexpansion population size for the NorthCentral African population is 6,600, the lower bound for the postexpansion population size is 8,400, and the allowed dates are between 49,000 and 640,000 years ago
The relationship between census size and effective size is complex, but arguments based on an island model of migration show that if the effective population size reflects the number of breeding individuals and the effects of population subdivision, then an effective population size of 10,000 is inconsistent with the census size of 500,000 to 1,000,000 that has been suggested by archeological evidence. However, these models have ignored the effects of population extinction and recolonization, which increase the expected variance among demes and reduce the inbreeding effective population size. Using models developed for population extinction and recolonization, we show that a large census size consistent with the multiregional model can be reconciled with an effective population size of 10,000, but genetic variation among demes must be high, reflecting low interdeme migration rates and a colonization process that involves a small number of colonists or kin-structured colonization.
A small human effective population size, on the order of 10,000 individuals, which is smaller than the effective population size of most great apes, has been interpreted as a result of a very long history, starting ? 2 mya, of a small population size, coined as the long-necked bottle model (Harpending et al. 1998; Hawks et al. 2000). Our findings are consistent with this hypothesis, but, depending on the mutation rate, we find either an effective population size of NA = 12,000 (95% C.I. = 9,000–15,500 when averaging over all three demographic models) using the mutation rate calibrated with the human-chimp divergence or an effective population size of NA = 32,500 individuals (95% C.I. = 27,500–34,500) using the mutation rate given by whole-genome trio analysis (The 1000 Genomes Project Consortium 2010) (supplementary figure 4 and table 6, Supplementary Material online). Not surprisingly, the estimated effective mutation rates ? = 4NAµ are comparable for the two mutation rates we considered, and are equal to 1.4 × 10?3/bp/generation (95% C.I. = (1.1–1.7) × 10?3). Relating the estimated effective population size to the census population size during the Pleistocene is a difficult task because there are many factors affecting the effective population size (Charlesworth 2009). Nevertheless, based on published estimates of the ratio between effective and census population size, a comprehensive value on the order of 10% has been found by Frankham (1995). This 10% rule roughly predicts that 120,000–325,[0]00 individuals (depending on the assumed mutation rate)
The maximum preexpansion population size for the NorthCentral African population is 6,600, the lower bound for the postexpansion population size is 8,400, and the allowed dates are between 49,000 and 640,000 years ago
The relationship between census size and effective size is complex, but arguments based on an island model of migration show that if the effective population size reflects the number of breeding individuals and the effects of population subdivision, then an effective population size of 10,000 is inconsistent with the census size of 500,000 to 1,000,000 that has been suggested by archeological evidence. However, these models have ignored the effects of population extinction and recolonization, which increase the expected variance among demes and reduce the inbreeding effective population size. Using models developed for population extinction and recolonization, we show that a large census size consistent with the multiregional model can be reconciled with an effective population size of 10,000, but genetic variation among demes must be high, reflecting low interdeme migration rates and a colonization process that involves a small number of colonists or kin-structured colonization.
