Protein isoform (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Protein isoform" in English language version.

refsWebsite

Global rank English rank

28nih.gov

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18doi.org

2^nd place

2semanticscholar.org

11^th place

8^th place

2handle.net

102^nd place

76^th place

1umich.edu

459^th place

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doi.org

Brett D, Pospisil H, Valcárcel J, Reich J, Bork P (January 2002). "Alternative splicing and genome complexity". Nature Genetics. 30 (1): 29–30. doi:10.1038/ng803. PMID 11743582. S2CID 2724843.
Schlüter H, Apweiler R, Holzhütter HG, Jungblut PR (September 2009). "Finding one's way in proteomics: a protein species nomenclature". Chemistry Central Journal. 3: 11. doi:10.1186/1752-153X-3-11. PMC 2758878. PMID 19740416.
Kozlowski, L.; Orlowski, J.; Bujnicki, J. M. (2012). "Structure Prediction for Alternatively Spliced Proteins". Alternative pre-mRNA Splicing. p. 582. doi:10.1002/9783527636778.ch54. ISBN 9783527636778.
Andreadis A, Gallego ME, Nadal-Ginard B (1987-01-01). "Generation of protein isoform diversity by alternative splicing: mechanistic and biological implications". Annual Review of Cell Biology. 3 (1): 207–42. doi:10.1146/annurev.cb.03.110187.001231. PMID 2891362.
Breitbart RE, Andreadis A, Nadal-Ginard B (1987-01-01). "Alternative splicing: a ubiquitous mechanism for the generation of multiple protein isoforms from single genes". Annual Review of Biochemistry. 56 (1): 467–95. doi:10.1146/annurev.bi.56.070187.002343. PMID 3304142.
Liu Y, Beyer A, Aebersold R (April 2016). "On the Dependency of Cellular Protein Levels on mRNA Abundance". Cell. 165 (3): 535–50. doi:10.1016/j.cell.2016.03.014. hdl:20.500.11850/116226. PMID 27104977.
Sommer, Markus J.; Cha, Sooyoung; Varabyou, Ales; Rincon, Natalia; Park, Sukhwan; Minkin, Ilia; Pertea, Mihaela; Steinegger, Martin; Salzberg, Steven L. (2022-12-15). "Structure-guided isoform identification for the human transcriptome". eLife. 11: e82556. doi:10.7554/eLife.82556. PMC 9812405. PMID 36519529.
Dasgupta B, Chhipa RR (March 2016). "Evolving Lessons on the Complex Role of AMPK in Normal Physiology and Cancer". Trends in Pharmacological Sciences. 37 (3): 192–206. doi:10.1016/j.tips.2015.11.007. PMC 4764394. PMID 26711141.
Kornblihtt AR, Schor IE, Alló M, Dujardin G, Petrillo E, Muñoz MJ (March 2013). "Alternative splicing: a pivotal step between eukaryotic transcription and translation". Nature Reviews Molecular Cell Biology. 14 (3): 153–65. doi:10.1038/nrm3525. hdl:11336/21049. PMID 23385723. S2CID 54560052.
Lee Y, Rio DC (2015-01-01). "Mechanisms and Regulation of Alternative Pre-mRNA Splicing". Annual Review of Biochemistry. 84 (1): 291–323. doi:10.1146/annurev-biochem-060614-034316. PMC 4526142. PMID 25784052.
Tress ML, Abascal F, Valencia A (February 2017). "Alternative Splicing May Not Be the Key to Proteome Complexity". Trends in Biochemical Sciences. 42 (2): 98–110. doi:10.1016/j.tibs.2016.08.008. PMC 6526280. PMID 27712956.
Battle A, Khan Z, Wang SH, Mitrano A, Ford MJ, Pritchard JK, Gilad Y (February 2015). "Genomic variation. Impact of regulatory variation from RNA to protein". Science. 347 (6222): 664–7. doi:10.1126/science.1260793. PMC 4507520. PMID 25657249.
Pickrell JK, Pai AA, Gilad Y, Pritchard JK (December 2010). "Noisy splicing drives mRNA isoform diversity in human cells". PLOS Genetics. 6 (12): e1001236. doi:10.1371/journal.pgen.1001236. PMC 3000347. PMID 21151575.
Smith LM, Kelleher NL (March 2013). "Proteoform: a single term describing protein complexity". Nature Methods. 10 (3): 186–7. doi:10.1038/nmeth.2369. PMC 4114032. PMID 23443629.
Li HD, Menon R, Omenn GS, Guan Y (December 2014). "Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence" (PDF). Proteomics. 14 (23–24): 2709–18. doi:10.1002/pmic.201400170. PMC 4372202. PMID 25265570.
Sundvall M, Veikkolainen V, Kurppa K, Salah Z, Tvorogov D, van Zoelen EJ, Aqeilan R, Elenius K (December 2010). "Cell death or survival promoted by alternative isoforms of ErbB4". Molecular Biology of the Cell. 21 (23): 4275–86. doi:10.1091/mbc.E10-04-0332. PMC 2993754. PMID 20943952.
Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, et al. (February 2016). "Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing". Cell. 164 (4): 805–17. doi:10.1016/j.cell.2016.01.029. PMC 4882190. PMID 26871637.
Barre L, Fournel-Gigleux S, Finel M, Netter P, Magdalou J, Ouzzine M (March 2007). "Substrate specificity of the human UDP-glucuronosyltransferase UGT2B4 and UGT2B7. Identification of a critical aromatic amino acid residue at position 33". The FEBS Journal. 274 (5): 1256–64. doi:10.1111/j.1742-4658.2007.05670.x. PMID 17263731.

handle.net

hdl.handle.net

Liu Y, Beyer A, Aebersold R (April 2016). "On the Dependency of Cellular Protein Levels on mRNA Abundance". Cell. 165 (3): 535–50. doi:10.1016/j.cell.2016.03.014. hdl:20.500.11850/116226. PMID 27104977.
Kornblihtt AR, Schor IE, Alló M, Dujardin G, Petrillo E, Muñoz MJ (March 2013). "Alternative splicing: a pivotal step between eukaryotic transcription and translation". Nature Reviews Molecular Cell Biology. 14 (3): 153–65. doi:10.1038/nrm3525. hdl:11336/21049. PMID 23385723. S2CID 54560052.

nih.gov

pubmed.ncbi.nlm.nih.gov

Brett D, Pospisil H, Valcárcel J, Reich J, Bork P (January 2002). "Alternative splicing and genome complexity". Nature Genetics. 30 (1): 29–30. doi:10.1038/ng803. PMID 11743582. S2CID 2724843.
Schlüter H, Apweiler R, Holzhütter HG, Jungblut PR (September 2009). "Finding one's way in proteomics: a protein species nomenclature". Chemistry Central Journal. 3: 11. doi:10.1186/1752-153X-3-11. PMC 2758878. PMID 19740416.
Andreadis A, Gallego ME, Nadal-Ginard B (1987-01-01). "Generation of protein isoform diversity by alternative splicing: mechanistic and biological implications". Annual Review of Cell Biology. 3 (1): 207–42. doi:10.1146/annurev.cb.03.110187.001231. PMID 2891362.
Breitbart RE, Andreadis A, Nadal-Ginard B (1987-01-01). "Alternative splicing: a ubiquitous mechanism for the generation of multiple protein isoforms from single genes". Annual Review of Biochemistry. 56 (1): 467–95. doi:10.1146/annurev.bi.56.070187.002343. PMID 3304142.
Liu Y, Beyer A, Aebersold R (April 2016). "On the Dependency of Cellular Protein Levels on mRNA Abundance". Cell. 165 (3): 535–50. doi:10.1016/j.cell.2016.03.014. hdl:20.500.11850/116226. PMID 27104977.
Sommer, Markus J.; Cha, Sooyoung; Varabyou, Ales; Rincon, Natalia; Park, Sukhwan; Minkin, Ilia; Pertea, Mihaela; Steinegger, Martin; Salzberg, Steven L. (2022-12-15). "Structure-guided isoform identification for the human transcriptome". eLife. 11: e82556. doi:10.7554/eLife.82556. PMC 9812405. PMID 36519529.
Dasgupta B, Chhipa RR (March 2016). "Evolving Lessons on the Complex Role of AMPK in Normal Physiology and Cancer". Trends in Pharmacological Sciences. 37 (3): 192–206. doi:10.1016/j.tips.2015.11.007. PMC 4764394. PMID 26711141.
Kornblihtt AR, Schor IE, Alló M, Dujardin G, Petrillo E, Muñoz MJ (March 2013). "Alternative splicing: a pivotal step between eukaryotic transcription and translation". Nature Reviews Molecular Cell Biology. 14 (3): 153–65. doi:10.1038/nrm3525. hdl:11336/21049. PMID 23385723. S2CID 54560052.
Lee Y, Rio DC (2015-01-01). "Mechanisms and Regulation of Alternative Pre-mRNA Splicing". Annual Review of Biochemistry. 84 (1): 291–323. doi:10.1146/annurev-biochem-060614-034316. PMC 4526142. PMID 25784052.
Tress ML, Abascal F, Valencia A (February 2017). "Alternative Splicing May Not Be the Key to Proteome Complexity". Trends in Biochemical Sciences. 42 (2): 98–110. doi:10.1016/j.tibs.2016.08.008. PMC 6526280. PMID 27712956.
Battle A, Khan Z, Wang SH, Mitrano A, Ford MJ, Pritchard JK, Gilad Y (February 2015). "Genomic variation. Impact of regulatory variation from RNA to protein". Science. 347 (6222): 664–7. doi:10.1126/science.1260793. PMC 4507520. PMID 25657249.
Pickrell JK, Pai AA, Gilad Y, Pritchard JK (December 2010). "Noisy splicing drives mRNA isoform diversity in human cells". PLOS Genetics. 6 (12): e1001236. doi:10.1371/journal.pgen.1001236. PMC 3000347. PMID 21151575.
Smith LM, Kelleher NL (March 2013). "Proteoform: a single term describing protein complexity". Nature Methods. 10 (3): 186–7. doi:10.1038/nmeth.2369. PMC 4114032. PMID 23443629.
Li HD, Menon R, Omenn GS, Guan Y (December 2014). "Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence" (PDF). Proteomics. 14 (23–24): 2709–18. doi:10.1002/pmic.201400170. PMC 4372202. PMID 25265570.
Sundvall M, Veikkolainen V, Kurppa K, Salah Z, Tvorogov D, van Zoelen EJ, Aqeilan R, Elenius K (December 2010). "Cell death or survival promoted by alternative isoforms of ErbB4". Molecular Biology of the Cell. 21 (23): 4275–86. doi:10.1091/mbc.E10-04-0332. PMC 2993754. PMID 20943952.
Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, et al. (February 2016). "Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing". Cell. 164 (4): 805–17. doi:10.1016/j.cell.2016.01.029. PMC 4882190. PMID 26871637.
Barre L, Fournel-Gigleux S, Finel M, Netter P, Magdalou J, Ouzzine M (March 2007). "Substrate specificity of the human UDP-glucuronosyltransferase UGT2B4 and UGT2B7. Identification of a critical aromatic amino acid residue at position 33". The FEBS Journal. 274 (5): 1256–64. doi:10.1111/j.1742-4658.2007.05670.x. PMID 17263731.

ncbi.nlm.nih.gov

Schlüter H, Apweiler R, Holzhütter HG, Jungblut PR (September 2009). "Finding one's way in proteomics: a protein species nomenclature". Chemistry Central Journal. 3: 11. doi:10.1186/1752-153X-3-11. PMC 2758878. PMID 19740416.
Sommer, Markus J.; Cha, Sooyoung; Varabyou, Ales; Rincon, Natalia; Park, Sukhwan; Minkin, Ilia; Pertea, Mihaela; Steinegger, Martin; Salzberg, Steven L. (2022-12-15). "Structure-guided isoform identification for the human transcriptome". eLife. 11: e82556. doi:10.7554/eLife.82556. PMC 9812405. PMID 36519529.
Dasgupta B, Chhipa RR (March 2016). "Evolving Lessons on the Complex Role of AMPK in Normal Physiology and Cancer". Trends in Pharmacological Sciences. 37 (3): 192–206. doi:10.1016/j.tips.2015.11.007. PMC 4764394. PMID 26711141.
Lee Y, Rio DC (2015-01-01). "Mechanisms and Regulation of Alternative Pre-mRNA Splicing". Annual Review of Biochemistry. 84 (1): 291–323. doi:10.1146/annurev-biochem-060614-034316. PMC 4526142. PMID 25784052.
Tress ML, Abascal F, Valencia A (February 2017). "Alternative Splicing May Not Be the Key to Proteome Complexity". Trends in Biochemical Sciences. 42 (2): 98–110. doi:10.1016/j.tibs.2016.08.008. PMC 6526280. PMID 27712956.
Battle A, Khan Z, Wang SH, Mitrano A, Ford MJ, Pritchard JK, Gilad Y (February 2015). "Genomic variation. Impact of regulatory variation from RNA to protein". Science. 347 (6222): 664–7. doi:10.1126/science.1260793. PMC 4507520. PMID 25657249.
Pickrell JK, Pai AA, Gilad Y, Pritchard JK (December 2010). "Noisy splicing drives mRNA isoform diversity in human cells". PLOS Genetics. 6 (12): e1001236. doi:10.1371/journal.pgen.1001236. PMC 3000347. PMID 21151575.
Smith LM, Kelleher NL (March 2013). "Proteoform: a single term describing protein complexity". Nature Methods. 10 (3): 186–7. doi:10.1038/nmeth.2369. PMC 4114032. PMID 23443629.
Li HD, Menon R, Omenn GS, Guan Y (December 2014). "Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence" (PDF). Proteomics. 14 (23–24): 2709–18. doi:10.1002/pmic.201400170. PMC 4372202. PMID 25265570.
Sundvall M, Veikkolainen V, Kurppa K, Salah Z, Tvorogov D, van Zoelen EJ, Aqeilan R, Elenius K (December 2010). "Cell death or survival promoted by alternative isoforms of ErbB4". Molecular Biology of the Cell. 21 (23): 4275–86. doi:10.1091/mbc.E10-04-0332. PMC 2993754. PMID 20943952.
Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, et al. (February 2016). "Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing". Cell. 164 (4): 805–17. doi:10.1016/j.cell.2016.01.029. PMC 4882190. PMID 26871637.

semanticscholar.org

api.semanticscholar.org

Brett D, Pospisil H, Valcárcel J, Reich J, Bork P (January 2002). "Alternative splicing and genome complexity". Nature Genetics. 30 (1): 29–30. doi:10.1038/ng803. PMID 11743582. S2CID 2724843.
Kornblihtt AR, Schor IE, Alló M, Dujardin G, Petrillo E, Muñoz MJ (March 2013). "Alternative splicing: a pivotal step between eukaryotic transcription and translation". Nature Reviews Molecular Cell Biology. 14 (3): 153–65. doi:10.1038/nrm3525. hdl:11336/21049. PMID 23385723. S2CID 54560052.

umich.edu

deepblue.lib.umich.edu

Li HD, Menon R, Omenn GS, Guan Y (December 2014). "Revisiting the identification of canonical splice isoforms through integration of functional genomics and proteomics evidence" (PDF). Proteomics. 14 (23–24): 2709–18. doi:10.1002/pmic.201400170. PMC 4372202. PMID 25265570.