Protein pKa calculations (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Protein pKa calculations" in English language version.

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34doi.org

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acs.org

pubs.acs.org

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doi.org

dx.doi.org

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doi.org

Tynan-Connolly, B. M.; Nielsen, J. E. (2006-12-22). "Redesigning protein pKa values". Protein Science. 16 (2): 239–249. doi:10.1110/ps.062538707. ISSN 0961-8368. PMC 2203286. PMID 17189477.
Li, Hui; Robertson, Andrew D.; Jensen, Jan H. (2005-10-17). "Very fast empirical prediction and rationalization of protein pKa values". Proteins: Structure, Function, and Bioinformatics. 61 (4): 704–721. doi:10.1002/prot.20660. PMID 16231289. S2CID 38196246.
Tan, Kuan Pern; Nguyen, Thanh Binh; Patel, Siddharth; Varadarajan, Raghavan; Madhusudhan, M. S. (2013-07-01). "Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins". Nucleic Acids Research. 41 (W1): W314 – W321. doi:10.1093/nar/gkt503. ISSN 1362-4962. PMC 3692129. PMID 23766289.

nih.gov

pubmed.ncbi.nlm.nih.gov

Tynan-Connolly, B. M.; Nielsen, J. E. (2006-12-22). "Redesigning protein pKa values". Protein Science. 16 (2): 239–249. doi:10.1110/ps.062538707. ISSN 0961-8368. PMC 2203286. PMID 17189477.
Li, Hui; Robertson, Andrew D.; Jensen, Jan H. (2005-10-17). "Very fast empirical prediction and rationalization of protein pKa values". Proteins: Structure, Function, and Bioinformatics. 61 (4): 704–721. doi:10.1002/prot.20660. PMID 16231289. S2CID 38196246.
Tan, Kuan Pern; Nguyen, Thanh Binh; Patel, Siddharth; Varadarajan, Raghavan; Madhusudhan, M. S. (2013-07-01). "Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins". Nucleic Acids Research. 41 (W1): W314 – W321. doi:10.1093/nar/gkt503. ISSN 1362-4962. PMC 3692129. PMID 23766289.

ncbi.nlm.nih.gov

Tynan-Connolly, B. M.; Nielsen, J. E. (2006-12-22). "Redesigning protein pKa values". Protein Science. 16 (2): 239–249. doi:10.1110/ps.062538707. ISSN 0961-8368. PMC 2203286. PMID 17189477.
Tan, Kuan Pern; Nguyen, Thanh Binh; Patel, Siddharth; Varadarajan, Raghavan; Madhusudhan, M. S. (2013-07-01). "Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins". Nucleic Acids Research. 41 (W1): W314 – W321. doi:10.1093/nar/gkt503. ISSN 1362-4962. PMC 3692129. PMID 23766289.

oup.com

academic.oup.com

Tan, Kuan Pern; Nguyen, Thanh Binh; Patel, Siddharth; Varadarajan, Raghavan; Madhusudhan, M. S. (2013-07-01). "Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins". Nucleic Acids Research. 41 (W1): W314 – W321. doi:10.1093/nar/gkt503. ISSN 1362-4962. PMC 3692129. PMID 23766289.

semanticscholar.org

api.semanticscholar.org

Li, Hui; Robertson, Andrew D.; Jensen, Jan H. (2005-10-17). "Very fast empirical prediction and rationalization of protein pKa values". Proteins: Structure, Function, and Bioinformatics. 61 (4): 704–721. doi:10.1002/prot.20660. PMID 16231289. S2CID 38196246.

vt.edu

newbiophysics.cs.vt.edu

"H++ (web-based computational prediction of protonation states and pK of ionizable groups in macromolecules)". newbiophysics.cs.vt.edu. Retrieved 2023-01-26.

wiley.com

onlinelibrary.wiley.com

Li, Hui; Robertson, Andrew D.; Jensen, Jan H. (2005-10-17). "Very fast empirical prediction and rationalization of protein pKa values". Proteins: Structure, Function, and Bioinformatics. 61 (4): 704–721. doi:10.1002/prot.20660. PMID 16231289. S2CID 38196246.

worldcat.org

search.worldcat.org

Tynan-Connolly, B. M.; Nielsen, J. E. (2006-12-22). "Redesigning protein pKa values". Protein Science. 16 (2): 239–249. doi:10.1110/ps.062538707. ISSN 0961-8368. PMC 2203286. PMID 17189477.
Tan, Kuan Pern; Nguyen, Thanh Binh; Patel, Siddharth; Varadarajan, Raghavan; Madhusudhan, M. S. (2013-07-01). "Depth: a web server to compute depth, cavity sizes, detect potential small-molecule ligand-binding cavities and predict the pKa of ionizable residues in proteins". Nucleic Acids Research. 41 (W1): W314 – W321. doi:10.1093/nar/gkt503. ISSN 1362-4962. PMC 3692129. PMID 23766289.