Pseudogene (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Pseudogene" in English language version.

refsWebsite

Global rank English rank

76nih.gov

4^th place

51doi.org

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10harvard.edu

18^th place

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8semanticscholar.org

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3worldcat.org

5^th place

1ncse.com

low place

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1nature.com

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1talkorigins.org

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1springer.com

274^th place

309^th place

1salford.ac.uk

low place

9,316^th place

doi.org

Mighell AJ, Smith NR, Robinson PA, Markham AF (February 2000). "Vertebrate pseudogenes". FEBS Letters. 468 (2–3): 109–114. doi:10.1016/S0014-5793(00)01199-6. PMID 10692568. S2CID 42204036.
Robicheau BM, Susko E, Harrigan AM, Snyder M (February 2017). "Ribosomal RNA Genes Contribute to the Formation of Pseudogenes and Junk DNA in the Human Genome". Genome Biology and Evolution. 9 (2): 380–397. doi:10.1093/gbe/evw307. PMC 5381670. PMID 28204512.
van Baren MJ, Brent MR (May 2006). "Iterative gene prediction and pseudogene removal improves genome annotation". Genome Research. 16 (5): 678–685. doi:10.1101/gr.4766206. PMC 1457044. PMID 16651666.
Kim MS, Pinto SM, Getnet D, Nirujogi RS, Manda SS, Chaerkady R, et al. (May 2014). "A draft map of the human proteome". Nature. 509 (7502): 575–581. Bibcode:2014Natur.509..575K. doi:10.1038/nature13302. PMC 4403737. PMID 24870542.
Jurka J (December 2004). "Evolutionary impact of human Alu repetitive elements". Current Opinion in Genetics & Development. 14 (6): 603–608. doi:10.1016/j.gde.2004.08.008. PMID 15531153.
Dewannieux M, Heidmann T (2005). "LINEs, SINEs and processed pseudogenes: parasitic strategies for genome modeling". Cytogenetic and Genome Research. 110 (1–4): 35–48. doi:10.1159/000084936. PMID 16093656. S2CID 25083962.
Dewannieux M, Esnault C, Heidmann T (September 2003). "LINE-mediated retrotransposition of marked Alu sequences". Nature Genetics. 35 (1): 41–48. doi:10.1038/ng1223. PMID 12897783. S2CID 32151696.
Graur D, Shuali Y, Li WH (April 1989). "Deletions in processed pseudogenes accumulate faster in rodents than in humans". Journal of Molecular Evolution. 28 (4): 279–285. Bibcode:1989JMolE..28..279G. doi:10.1007/BF02103423. PMID 2499684. S2CID 22437436.
Baertsch R, Diekhans M, Kent WJ, Haussler D, Brosius J (October 2008). "Retrocopy contributions to the evolution of the human genome". BMC Genomics. 9: 466. doi:10.1186/1471-2164-9-466. PMC 2584115. PMID 18842134.
Pavlícek A, Paces J, Zíka R, Hejnar J (October 2002). "Length distribution of long interspersed nucleotide elements (LINEs) and processed pseudogenes of human endogenous retroviruses: implications for retrotransposition and pseudogene detection". Gene. 300 (1–2): 189–194. doi:10.1016/S0378-1119(02)01047-8. PMID 12468100.
Navarro FC, Galante PA (July 2015). "A Genome-Wide Landscape of Retrocopies in Primate Genomes". Genome Biology and Evolution. 7 (8): 2265–2275. doi:10.1093/gbe/evv142. PMC 4558860. PMID 26224704.
Schrider DR, Navarro FC, Galante PA, Parmigiani RB, Camargo AA, Hahn MW, de Souza SJ (2013-01-24). "Gene copy-number polymorphism caused by retrotransposition in humans". PLOS Genetics. 9 (1): e1003242. doi:10.1371/journal.pgen.1003242. PMC 3554589. PMID 23359205.
Zheng D, Frankish A, Baertsch R, Kapranov P, Reymond A, Choo SW, et al. (June 2007). "Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution". Genome Research. 17 (6): 839–851. doi:10.1101/gr.5586307. PMC 1891343. PMID 17568002.
Lynch M, Conery JS (November 2000). "The evolutionary fate and consequences of duplicate genes". Science. 290 (5494): 1151–1155. Bibcode:2000Sci...290.1151L. doi:10.1126/science.290.5494.1151. PMID 11073452.
Walsh JB (January 1995). "How often do duplicated genes evolve new functions?". Genetics. 139 (1): 421–428. doi:10.1093/genetics/139.1.421. PMC 1206338. PMID 7705642.
Lynch M, O'Hely M, Walsh B, Force A (December 2001). "The probability of preservation of a newly arisen gene duplicate". Genetics. 159 (4): 1789–1804. doi:10.1093/genetics/159.4.1789. PMC 1461922. PMID 11779815.
Harrison PM, Hegyi H, Balasubramanian S, Luscombe NM, Bertone P, Echols N, et al. (February 2002). "Molecular fossils in the human genome: identification and analysis of the pseudogenes in chromosomes 21 and 22". Genome Research. 12 (2): 272–280. doi:10.1101/gr.207102. PMC 155275. PMID 11827946.
Zhang J (2003). "Evolution by gene duplication: an update". Trends in Ecology and Evolution. 18 (6): 292–298. doi:10.1016/S0169-5347(03)00033-8.
Nishikimi M, Kawai T, Yagi K (October 1992). "Guinea pigs possess a highly mutated gene for L-gulono-gamma-lactone oxidase, the key enzyme for L-ascorbic acid biosynthesis missing in this species". The Journal of Biological Chemistry. 267 (30): 21967–21972. doi:10.1016/S0021-9258(19)36707-9. PMID 1400507.
Nishikimi M, Fukuyama R, Minoshima S, Shimizu N, Yagi K (May 1994). "Cloning and chromosomal mapping of the human nonfunctional gene for L-gulono-gamma-lactone oxidase, the enzyme for L-ascorbic acid biosynthesis missing in man". The Journal of Biological Chemistry. 269 (18): 13685–13688. doi:10.1016/S0021-9258(17)36884-9. PMID 8175804.
Xue Y, Daly A, Yngvadottir B, Liu M, Coop G, Kim Y, et al. (April 2006). "Spread of an inactive form of caspase-12 in humans is due to recent positive selection". American Journal of Human Genetics. 78 (4): 659–670. doi:10.1086/503116. PMC 1424700. PMID 16532395.
Abascal, Federico; Juan, David; Jungreis, Irwin; Kellis, Manolis; Martinez, Laura; Rigau, Maria; Rodriguez, Jose Manuel; Vazquez, Jesus; Tress, Michael L. (2018-08-21). "Loose ends: almost one in five human genes still have unresolved coding status". Nucleic Acids Research. 46 (14): 7070–7084. doi:10.1093/nar/gky587. ISSN 1362-4962. PMC 6101605. PMID 29982784.
Rausell, Antonio; Luo, Yufei; Lopez, Marie; Seeleuthner, Yoann; Rapaport, Franck; Favier, Antoine; Stenson, Peter D.; Cooper, David N.; Patin, Etienne; Casanova, Jean-Laurent; Quintana-Murci, Lluis; Abel, Laurent (2020-06-16). "Common homozygosity for predicted loss-of-function variants reveals both redundant and advantageous effects of dispensable human genes". Proceedings of the National Academy of Sciences of the United States of America. 117 (24): 13626–13636. doi:10.1073/pnas.1917993117. ISSN 1091-6490. PMC 7306792. PMID 32487729.
Lopes-Marques, Mónica; Peixoto, M. João; Cooper, David N.; Prata, M. João; Azevedo, Luísa; Castro, L. Filipe C. (2024-11-02). "Polymorphic pseudogenes in the human genome - a comprehensive assessment". Human Genetics. doi:10.1007/s00439-024-02715-9. ISSN 1432-1203. PMC 11576641.
Cheetham SW, Faulkner GJ, Dinger ME (March 2020). "Overcoming challenges and dogmas to understand the functions of pseudogenes". Nature Reviews. Genetics. 21 (3): 191–201. doi:10.1038/s41576-019-0196-1. PMID 31848477. S2CID 209393216.
Zerbino DR, Frankish A, Flicek P (August 2020). "Progress, Challenges, and Surprises in Annotating the Human Genome". Annual Review of Genomics and Human Genetics. 21 (1): 55–79. doi:10.1146/annurev-genom-121119-083418. PMC 7116059. PMID 32421357.
Prieto-Godino LL, Rytz R, Bargeton B, Abuin L, Arguello JR, Peraro MD, Benton R (November 2016). "Olfactory receptor pseudo-pseudogenes". Nature. 539 (7627): 93–97. Bibcode:2016Natur.539...93P. doi:10.1038/nature19824. PMC 5164928. PMID 27776356.
Jeffs P, Ashburner M (May 1991). "Processed pseudogenes in Drosophila". Proceedings. Biological Sciences. 244 (1310): 151–159. Bibcode:1991RSPSB.244..151J. doi:10.1098/rspb.1991.0064. PMID 1679549. S2CID 1665885.
Wang W, Zhang J, Alvarez C, Llopart A, Long M (September 2000). "The origin of the Jingwei gene and the complex modular structure of its parental gene, yellow emperor, in Drosophila melanogaster". Molecular Biology and Evolution. 17 (9): 1294–1301. doi:10.1093/oxfordjournals.molbev.a026413. PMID 10958846.
Long M, Langley CH (April 1993). "Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila". Science. 260 (5104): 91–95. Bibcode:1993Sci...260...91L. doi:10.1126/science.7682012. PMID 7682012.
Pei B, Sisu C, Frankish A, Howald C, Habegger L, Mu XJ, et al. (September 2012). "The GENCODE pseudogene resource". Genome Biology. 13 (9): R51. doi:10.1186/gb-2012-13-9-r51. PMC 3491395. PMID 22951037.
Wright JC, Mudge J, Weisser H, Barzine MP, Gonzalez JM, Brazma A, et al. (June 2016). "Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow". Nature Communications. 7: 11778. Bibcode:2016NatCo...711778W. doi:10.1038/ncomms11778. PMC 4895710. PMID 27250503.
Dierick HA, Mercer JF, Glover TW (October 1997). "A phosphoglycerate mutase brain isoform (PGAM 1) pseudogene is localized within the human Menkes disease gene (ATP7 A)". Gene. 198 (1–2): 37–41. doi:10.1016/s0378-1119(97)00289-8. PMID 9370262.
Betrán E, Wang W, Jin L, Long M (May 2002). "Evolution of the phosphoglycerate mutase processed gene in human and chimpanzee revealing the origin of a new primate gene". Molecular Biology and Evolution. 19 (5): 654–663. doi:10.1093/oxfordjournals.molbev.a004124. PMID 11961099.
Okuda H, Tsujimura A, Irie S, Yamamoto K, Fukuhara S, Matsuoka Y, et al. (2012). "A single nucleotide polymorphism within the novel sex-linked testis-specific retrotransposed PGAM4 gene influences human male fertility". PLOS ONE. 7 (5): e35195. Bibcode:2012PLoSO...735195O. doi:10.1371/journal.pone.0035195. PMC 3348931. PMID 22590500.
Belinky F, Ganguly I, Poliakov E, Yurchenko V, Rogozin IB (February 2021). "Analysis of Stop Codons within Prokaryotic Protein-Coding Genes Suggests Frequent Readthrough Events". International Journal of Molecular Sciences. 22 (4): 1876. doi:10.3390/ijms22041876. PMC 7918605. PMID 33672790.
Feng Y, Wang Z, Chien KY, Chen HL, Liang YH, Hua X, Chiu CH (May 2022). ""Pseudo-pseudogenes" in bacterial genomes: Proteogenomics reveals a wide but low protein expression of pseudogenes in Salmonella enterica". Nucleic Acids Research. 50 (9): 5158–5170. doi:10.1093/nar/gkac302. PMC 9122581. PMID 35489061.
Chan WL, Chang JG (2014). "Pseudogene-Derived Endogenous siRNAs and Their Function". Pseudogenes. Methods in Molecular Biology. Vol. 1167. pp. 227–39. doi:10.1007/978-1-4939-0835-6_15. ISBN 978-1-4939-0834-9. PMID 24823781.
Chan WL, Yuo CY, Yang WK, Hung SY, Chang YS, Chiu CC, et al. (April 2013). "Transcribed pseudogene ψPPM1K generates endogenous siRNA to suppress oncogenic cell growth in hepatocellular carcinoma". Nucleic Acids Research. 41 (6): 3734–3747. doi:10.1093/nar/gkt047. PMC 3616710. PMID 23376929.
Roberts TC, Morris KV (December 2013). "Not so pseudo anymore: pseudogenes as therapeutic targets". Pharmacogenomics. 14 (16): 2023–2034. doi:10.2217/pgs.13.172. PMC 4068744. PMID 24279857.
Olovnikov I, Le Thomas A, Aravin AA (2014). "A Framework for piRNA Cluster Manipulation". PIWI-Interacting RNAs. Methods in Molecular Biology. Vol. 1093. pp. 47–58. doi:10.1007/978-1-62703-694-8_5. ISBN 978-1-62703-693-1. PMID 24178556.
Siomi MC, Sato K, Pezic D, Aravin AA (April 2011). "PIWI-interacting small RNAs: the vanguard of genome defence". Nature Reviews. Molecular Cell Biology. 12 (4): 246–258. doi:10.1038/nrm3089. PMID 21427766. S2CID 5710813.
Karreth FA, Reschke M, Ruocco A, Ng C, Chapuy B, Léopold V, et al. (April 2015). "The BRAF pseudogene functions as a competitive endogenous RNA and induces lymphoma in vivo". Cell. 161 (2): 319–332. doi:10.1016/j.cell.2015.02.043. PMC 6922011. PMID 25843629.
Dahia PL, FitzGerald MG, Zhang X, Marsh DJ, Zheng Z, Pietsch T, et al. (May 1998). "A highly conserved processed PTEN pseudogene is located on chromosome band 9p21". Oncogene. 16 (18): 2403–2406. doi:10.1038/sj.onc.1201762. PMID 9620558.
Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP (June 2010). "A coding-independent function of gene and pseudogene mRNAs regulates tumour biology". Nature. 465 (7301): 1033–1038. Bibcode:2010Natur.465.1033P. doi:10.1038/nature09144. PMC 3206313. PMID 20577206.
Balakirev ES, Ayala FJ (2003). "Pseudogenes: are they "junk" or functional DNA?". Annual Review of Genetics. 37: 123–151. doi:10.1146/annurev.genet.37.040103.103949. PMID 14616058.
Goodhead I, Darby AC (February 2015). "Taking the pseudo out of pseudogenes" (PDF). Current Opinion in Microbiology. 23: 102–109. doi:10.1016/j.mib.2014.11.012. PMID 25461580.
Dagan T, Blekhman R, Graur D (February 2006). "The "domino theory" of gene death: gradual and mass gene extinction events in three lineages of obligate symbiotic bacterial pathogens". Molecular Biology and Evolution. 23 (2): 310–316. doi:10.1093/molbev/msj036. PMID 16237210.
Malhotra S, Vedithi SC, Blundell TL (August 2017). "Decoding the similarities and differences among mycobacterial species". PLOS Neglected Tropical Diseases. 11 (8): e0005883. doi:10.1371/journal.pntd.0005883. PMC 5595346. PMID 28854187.
Lopera J, Miller IJ, McPhail KL, Kwan JC (November 21, 2017). "Increased Biosynthetic Gene Dosage in a Genome-Reduced Defensive Bacterial Symbiont". mSystems. 2 (6): 1–18. doi:10.1128/msystems.00096-17. PMC 5698493. PMID 29181447.
Cole ST, Eiglmeier K, Parkhill J, James KD, Thomson NR, Wheeler PR, et al. (February 2001). "Massive gene decay in the leprosy bacillus". Nature. 409 (6823): 1007–1011. Bibcode:2001Natur.409.1007C. doi:10.1038/35059006. PMID 11234002. S2CID 4307207.

harvard.edu

ui.adsabs.harvard.edu

Kim MS, Pinto SM, Getnet D, Nirujogi RS, Manda SS, Chaerkady R, et al. (May 2014). "A draft map of the human proteome". Nature. 509 (7502): 575–581. Bibcode:2014Natur.509..575K. doi:10.1038/nature13302. PMC 4403737. PMID 24870542.
Graur D, Shuali Y, Li WH (April 1989). "Deletions in processed pseudogenes accumulate faster in rodents than in humans". Journal of Molecular Evolution. 28 (4): 279–285. Bibcode:1989JMolE..28..279G. doi:10.1007/BF02103423. PMID 2499684. S2CID 22437436.
Lynch M, Conery JS (November 2000). "The evolutionary fate and consequences of duplicate genes". Science. 290 (5494): 1151–1155. Bibcode:2000Sci...290.1151L. doi:10.1126/science.290.5494.1151. PMID 11073452.
Prieto-Godino LL, Rytz R, Bargeton B, Abuin L, Arguello JR, Peraro MD, Benton R (November 2016). "Olfactory receptor pseudo-pseudogenes". Nature. 539 (7627): 93–97. Bibcode:2016Natur.539...93P. doi:10.1038/nature19824. PMC 5164928. PMID 27776356.
Jeffs P, Ashburner M (May 1991). "Processed pseudogenes in Drosophila". Proceedings. Biological Sciences. 244 (1310): 151–159. Bibcode:1991RSPSB.244..151J. doi:10.1098/rspb.1991.0064. PMID 1679549. S2CID 1665885.
Long M, Langley CH (April 1993). "Natural selection and the origin of jingwei, a chimeric processed functional gene in Drosophila". Science. 260 (5104): 91–95. Bibcode:1993Sci...260...91L. doi:10.1126/science.7682012. PMID 7682012.
Wright JC, Mudge J, Weisser H, Barzine MP, Gonzalez JM, Brazma A, et al. (June 2016). "Improving GENCODE reference gene annotation using a high-stringency proteogenomics workflow". Nature Communications. 7: 11778. Bibcode:2016NatCo...711778W. doi:10.1038/ncomms11778. PMC 4895710. PMID 27250503.
Okuda H, Tsujimura A, Irie S, Yamamoto K, Fukuhara S, Matsuoka Y, et al. (2012). "A single nucleotide polymorphism within the novel sex-linked testis-specific retrotransposed PGAM4 gene influences human male fertility". PLOS ONE. 7 (5): e35195. Bibcode:2012PLoSO...735195O. doi:10.1371/journal.pone.0035195. PMC 3348931. PMID 22590500.
Poliseno L, Salmena L, Zhang J, Carver B, Haveman WJ, Pandolfi PP (June 2010). "A coding-independent function of gene and pseudogene mRNAs regulates tumour biology". Nature. 465 (7301): 1033–1038. Bibcode:2010Natur.465.1033P. doi:10.1038/nature09144. PMC 3206313. PMID 20577206.
Cole ST, Eiglmeier K, Parkhill J, James KD, Thomson NR, Wheeler PR, et al. (February 2001). "Massive gene decay in the leprosy bacillus". Nature. 409 (6823): 1007–1011. Bibcode:2001Natur.409.1007C. doi:10.1038/35059006. PMID 11234002. S2CID 4307207.

nature.com

Chandrasekaran C, Betrán E (2008). "Origins of new genes and pseudogenes". Nature Education. 1 (1): 181.

ncse.com

Max EE (1986). "Plagiarized Errors and Molecular Genetics". Creation Evolution Journal. 6 (3): 34–46.

nih.gov

pubmed.ncbi.nlm.nih.gov

Mighell AJ, Smith NR, Robinson PA, Markham AF (February 2000). "Vertebrate pseudogenes". FEBS Letters. 468 (2–3): 109–114. doi:10.1016/S0014-5793(00)01199-6. PMID 10692568. S2CID 42204036.
Robicheau BM, Susko E, Harrigan AM, Snyder M (February 2017). "Ribosomal RNA Genes Contribute to the Formation of Pseudogenes and Junk DNA in the Human Genome". Genome Biology and Evolution. 9 (2): 380–397. doi:10.1093/gbe/evw307. PMC 5381670. PMID 28204512.
van Baren MJ, Brent MR (May 2006). "Iterative gene prediction and pseudogene removal improves genome annotation". Genome Research. 16 (5): 678–685. doi:10.1101/gr.4766206. PMC 1457044. PMID 16651666.
Kim MS, Pinto SM, Getnet D, Nirujogi RS, Manda SS, Chaerkady R, et al. (May 2014). "A draft map of the human proteome". Nature. 509 (7502): 575–581. Bibcode:2014Natur.509..575K. doi:10.1038/nature13302. PMC 4403737. PMID 24870542.
Jurka J (December 2004). "Evolutionary impact of human Alu repetitive elements". Current Opinion in Genetics & Development. 14 (6): 603–608. doi:10.1016/j.gde.2004.08.008. PMID 15531153.
Dewannieux M, Heidmann T (2005). "LINEs, SINEs and processed pseudogenes: parasitic strategies for genome modeling". Cytogenetic and Genome Research. 110 (1–4): 35–48. doi:10.1159/000084936. PMID 16093656. S2CID 25083962.
Dewannieux M, Esnault C, Heidmann T (September 2003). "LINE-mediated retrotransposition of marked Alu sequences". Nature Genetics. 35 (1): 41–48. doi:10.1038/ng1223. PMID 12897783. S2CID 32151696.
Graur D, Shuali Y, Li WH (April 1989). "Deletions in processed pseudogenes accumulate faster in rodents than in humans". Journal of Molecular Evolution. 28 (4): 279–285. Bibcode:1989JMolE..28..279G. doi:10.1007/BF02103423. PMID 2499684. S2CID 22437436.
Baertsch R, Diekhans M, Kent WJ, Haussler D, Brosius J (October 2008). "Retrocopy contributions to the evolution of the human genome". BMC Genomics. 9: 466. doi:10.1186/1471-2164-9-466. PMC 2584115. PMID 18842134.
Pavlícek A, Paces J, Zíka R, Hejnar J (October 2002). "Length distribution of long interspersed nucleotide elements (LINEs) and processed pseudogenes of human endogenous retroviruses: implications for retrotransposition and pseudogene detection". Gene. 300 (1–2): 189–194. doi:10.1016/S0378-1119(02)01047-8. PMID 12468100.
Navarro FC, Galante PA (July 2015). "A Genome-Wide Landscape of Retrocopies in Primate Genomes". Genome Biology and Evolution. 7 (8): 2265–2275. doi:10.1093/gbe/evv142. PMC 4558860. PMID 26224704.
Schrider DR, Navarro FC, Galante PA, Parmigiani RB, Camargo AA, Hahn MW, de Souza SJ (2013-01-24). "Gene copy-number polymorphism caused by retrotransposition in humans". PLOS Genetics. 9 (1): e1003242. doi:10.1371/journal.pgen.1003242. PMC 3554589. PMID 23359205.
Zheng D, Frankish A, Baertsch R, Kapranov P, Reymond A, Choo SW, et al. (June 2007). "Pseudogenes in the ENCODE regions: consensus annotation, analysis of transcription, and evolution". Genome Research. 17 (6): 839–851. doi:10.1101/gr.5586307. PMC 1891343. PMID 17568002.
Lynch M, Conery JS (November 2000). "The evolutionary fate and consequences of duplicate genes". Science. 290 (5494): 1151–1155. Bibcode:2000Sci...290.1151L. doi:10.1126/science.290.5494.1151. PMID 11073452.
Walsh JB (January 1995). "How often do duplicated genes evolve new functions?". Genetics. 139 (1): 421–428. doi:10.1093/genetics/139.1.421. PMC 1206338. PMID 7705642.
Lynch M, O'Hely M, Walsh B, Force A (December 2001). "The probability of preservation of a newly arisen gene duplicate". Genetics. 159 (4): 1789–1804. doi:10.1093/genetics/159.4.1789. PMC 1461922. PMID 11779815.
Harrison PM, Hegyi H, Balasubramanian S, Luscombe NM, Bertone P, Echols N, et al. (February 2002). "Molecular fossils in the human genome: identification and analysis of the pseudogenes in chromosomes 21 and 22". Genome Research. 12 (2): 272–280. doi:10.1101/gr.207102. PMC 155275. PMID 11827946.
Nishikimi M, Kawai T, Yagi K (October 1992). "Guinea pigs possess a highly mutated gene for L-gulono-gamma-lactone oxidase, the key enzyme for L-ascorbic acid biosynthesis missing in this species". The Journal of Biological Chemistry. 267 (30): 21967–21972. doi:10.1016/S0021-9258(19)36707-9. PMID 1400507.
Nishikimi M, Fukuyama R, Minoshima S, Shimizu N, Yagi K (May 1994). "Cloning and chromosomal mapping of the human nonfunctional gene for L-gulono-gamma-lactone oxidase, the enzyme for L-ascorbic acid biosynthesis missing in man". The Journal of Biological Chemistry. 269 (18): 13685–13688. doi:10.1016/S0021-9258(17)36884-9. PMID 8175804.
Xue Y, Daly A, Yngvadottir B, Liu M, Coop G, Kim Y, et al. (April 2006). "Spread of an inactive form of caspase-12 in humans is due to recent positive selection". American Journal of Human Genetics. 78 (4): 659–670. doi:10.1086/503116. PMC 1424700. PMID 16532395.
Abascal, Federico; Juan, David; Jungreis, Irwin; Kellis, Manolis; Martinez, Laura; Rigau, Maria; Rodriguez, Jose Manuel; Vazquez, Jesus; Tress, Michael L. (2018-08-21). "Loose ends: almost one in five human genes still have unresolved coding status". Nucleic Acids Research. 46 (14): 7070–7084. doi:10.1093/nar/gky587. ISSN 1362-4962. PMC 6101605. PMID 29982784.
Rausell, Antonio; Luo, Yufei; Lopez, Marie; Seeleuthner, Yoann; Rapaport, Franck; Favier, Antoine; Stenson, Peter D.; Cooper, David N.; Patin, Etienne; Casanova, Jean-Laurent; Quintana-Murci, Lluis; Abel, Laurent (2020-06-16). "Common homozygosity for predicted loss-of-function variants reveals both redundant and advantageous effects of dispensable human genes". Proceedings of the National Academy of Sciences of the United States of America. 117 (24): 13626–13636. doi:10.1073/pnas.1917993117. ISSN 1091-6490. PMC 7306792. PMID 32487729.
Cheetham SW, Faulkner GJ, Dinger ME (March 2020). "Overcoming challenges and dogmas to understand the functions of pseudogenes". Nature Reviews. Genetics. 21 (3): 191–201. doi:10.1038/s41576-019-0196-1. PMID 31848477. S2CID 209393216.
Zerbino DR, Frankish A, Flicek P (August 2020). "Progress, Challenges, and Surprises in Annotating the Human Genome". Annual Review of Genomics and Human Genetics. 21 (1): 55–79. doi:10.1146/annurev-genom-121119-083418. PMC 7116059. PMID 32421357.
Prieto-Godino LL, Rytz R, Bargeton B, Abuin L, Arguello JR, Peraro MD, Benton R (November 2016). "Olfactory receptor pseudo-pseudogenes". Nature. 539 (7627): 93–97. Bibcode:2016Natur.539...93P. doi:10.1038/nature19824. PMC 5164928. PMID 27776356.
Jeffs P, Ashburner M (May 1991). "Processed pseudogenes in Drosophila". Proceedings. Biological Sciences. 244 (1310): 151–159. Bibcode:1991RSPSB.244..151J. doi:10.1098/rspb.1991.0064. PMID 1679549. S2CID 1665885.
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Abascal, Federico; Juan, David; Jungreis, Irwin; Kellis, Manolis; Martinez, Laura; Rigau, Maria; Rodriguez, Jose Manuel; Vazquez, Jesus; Tress, Michael L. (2018-08-21). "Loose ends: almost one in five human genes still have unresolved coding status". Nucleic Acids Research. 46 (14): 7070–7084. doi:10.1093/nar/gky587. ISSN 1362-4962. PMC 6101605. PMID 29982784.
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Lopes-Marques, Mónica; Peixoto, M. João; Cooper, David N.; Prata, M. João; Azevedo, Luísa; Castro, L. Filipe C. (2024-11-02). "Polymorphic pseudogenes in the human genome - a comprehensive assessment". Human Genetics. doi:10.1007/s00439-024-02715-9. ISSN 1432-1203. PMC 11576641.