RNA splicing (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "RNA splicing" in English language version.

refsWebsite

Global rank English rank

71nih.gov

4^th place

44doi.org

2^nd place

12semanticscholar.org

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9harvard.edu

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3web.archive.org

1^st place

1nature.com

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1escholarship.org

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1cshlp.org

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1jstor.org

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1jbc.org

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1zenodo.org

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cshlp.org

rnajournal.cshlp.org

Graveley BR, Hertel KJ, Maniatis T (June 2001). "The role of U2AF35 and U2AF65 in enhancer-dependent splicing". RNA. 7 (6): 806–818. doi:10.1017/s1355838201010317. PMC 1370132. PMID 11421359. Archived from the original on 2018-11-20. Retrieved 2014-12-17.

doi.org

Gilbert W (February 1978). "Why genes in pieces?". Nature. 271 (5645): 501. Bibcode:1978Natur.271..501G. doi:10.1038/271501a0. PMID 622185. S2CID 4216649.
Tonegawa S, Maxam AM, Tizard R, Bernard O, Gilbert W (March 1978). "Sequence of a mouse germ-line gene for a variable region of an immunoglobulin light chain". Proceedings of the National Academy of Sciences of the United States of America. 75 (3): 1485–1489. Bibcode:1978PNAS...75.1485T. doi:10.1073/pnas.75.3.1485. PMC 411497. PMID 418414.
Tilgner H, Knowles DG, Johnson R, Davis CA, Chakrabortty S, Djebali S, et al. (September 2012). "Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs". Genome Research. 22 (9): 1616–1625. doi:10.1101/gr.134445.111. PMC 3431479. PMID 22955974.
Roy SW, Gilbert W (March 2006). "The evolution of spliceosomal introns: patterns, puzzles and progress". Nature Reviews. Genetics. 7 (3): 211–221. doi:10.1038/nrg1807. PMID 16485020. S2CID 33672491.
Black DL (June 2003). "Mechanisms of alternative pre-messenger RNA splicing". Annual Review of Biochemistry. 72 (1): 291–336. doi:10.1146/annurev.biochem.72.121801.161720. PMID 12626338. S2CID 23576288.
Taggart AJ, DeSimone AM, Shih JS, Filloux ME, Fairbrother WG (June 2012). "Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo". Nature Structural & Molecular Biology. 19 (7): 719–721. doi:10.1038/nsmb.2327. PMC 3465671. PMID 22705790.
Corvelo A, Hallegger M, Smith CW, Eyras E (November 2010). Meyer IM (ed.). "Genome-wide association between branch point properties and alternative splicing". PLOS Computational Biology. 6 (11): e1001016. Bibcode:2010PLSCB...6E1016C. doi:10.1371/journal.pcbi.1001016. PMC 2991248. PMID 21124863.
Graveley BR, Hertel KJ, Maniatis T (June 2001). "The role of U2AF35 and U2AF65 in enhancer-dependent splicing". RNA. 7 (6): 806–818. doi:10.1017/s1355838201010317. PMC 1370132. PMID 11421359. Archived from the original on 2018-11-20. Retrieved 2014-12-17.
Matlin AJ, Clark F, Smith CW (May 2005). "Understanding alternative splicing: towards a cellular code". Nature Reviews. Molecular Cell Biology. 6 (5): 386–398. doi:10.1038/nrm1645. PMID 15956978. S2CID 14883495.
Matera AG, Wang Z (February 2014). "A day in the life of the spliceosome". Nature Reviews. Molecular Cell Biology. 15 (2): 108–121. doi:10.1038/nrm3742. PMC 4060434. PMID 24452469.
Guth S, Valcárcel J (December 2000). "Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF". The Journal of Biological Chemistry. 275 (48): 38059–38066. doi:10.1074/jbc.M001483200. PMID 10954700.
Cheng Z, Menees TM (December 2011). "RNA splicing and debranching viewed through analysis of RNA lariats". Molecular Genetics and Genomics. 286 (5–6): 395–410. doi:10.1007/s00438-011-0635-y. PMID 22065066. S2CID 846297.
Ng B, Yang F, Huston DP, Yan Y, Yang Y, Xiong Z, et al. (December 2004). "Increased noncanonical splicing of autoantigen transcripts provides the structural basis for expression of untolerized epitopes". The Journal of Allergy and Clinical Immunology. 114 (6): 1463–1470. doi:10.1016/j.jaci.2004.09.006. PMC 3902068. PMID 15577853.
Patel AA, Steitz JA (December 2003). "Splicing double: insights from the second spliceosome". Nature Reviews. Molecular Cell Biology. 4 (12): 960–970. doi:10.1038/nrm1259. PMID 14685174. S2CID 21816910.
Sibley CR, Emmett W, Blazquez L, Faro A, Haberman N, Briese M, et al. (May 2015). "Recursive splicing in long vertebrate genes". Nature. 521 (7552): 371–375. Bibcode:2015Natur.521..371S. doi:10.1038/nature14466. PMC 4471124. PMID 25970246.
Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, et al. (May 2015). "Genome-wide identification of zero nucleotide recursive splicing in Drosophila". Nature. 521 (7552): 376–379. Bibcode:2015Natur.521..376D. doi:10.1038/nature14475. PMC 4529404. PMID 25970244.
Di Segni G, Gastaldi S, Tocchini-Valentini GP (May 2008). "Cis- and trans-splicing of mRNAs mediated by tRNA sequences in eukaryotic cells". Proceedings of the National Academy of Sciences of the United States of America. 105 (19): 6864–6869. Bibcode:2008PNAS..105.6864D. doi:10.1073/pnas.0800420105. JSTOR 25461891. PMC 2383978. PMID 18458335.
Eul J, Patzel V (November 2013). "Homologous SV40 RNA trans-splicing: a new mechanism for diversification of viral sequences and phenotypes". RNA Biology. 10 (11): 1689–1699. doi:10.4161/rna.26707. PMC 3907479. PMID 24178438.
Trotta CR, Miao F, Arn EA, Stevens SW, Ho CK, Rauhut R, Abelson JN (June 1997). "The yeast tRNA splicing endonuclease: a tetrameric enzyme with two active site subunits homologous to the archaeal tRNA endonucleases". Cell. 89 (6): 849–858. doi:10.1016/S0092-8674(00)80270-6. PMID 9200603. S2CID 16055381.
Westaway SK, Phizicky EM, Abelson J (March 1988). "Structure and function of the yeast tRNA ligase gene". The Journal of Biological Chemistry. 263 (7): 3171–3176. doi:10.1016/S0021-9258(18)69050-7. PMID 3277966. Archived from the original on 2018-11-18. Retrieved 2014-12-17.
Paushkin SV, Patel M, Furia BS, Peltz SW, Trotta CR (April 2004). "Identification of a human endonuclease complex reveals a link between tRNA splicing and pre-mRNA 3' end formation". Cell. 117 (3): 311–321. doi:10.1016/S0092-8674(04)00342-3. PMID 15109492. S2CID 16049289.
Soma A (1 April 2014). "Circularly permuted tRNA genes: their expression and implications for their physiological relevance and development". Frontiers in Genetics. 5: 63. doi:10.3389/fgene.2014.00063. PMC 3978253. PMID 24744771.
Abelson J, Trotta CR, Li H (May 1998). "tRNA splicing". The Journal of Biological Chemistry. 273 (21): 12685–12688. doi:10.1074/jbc.273.21.12685. PMID 9582290.
Fica SM, Tuttle N, Novak T, Li NS, Lu J, Koodathingal P, et al. (November 2013). "RNA catalyses nuclear pre-mRNA splicing". Nature. 503 (7475): 229–234. Bibcode:2013Natur.503..229F. doi:10.1038/nature12734. PMC 4666680. PMID 24196718.
Pan Q, Shai O, Lee LJ, Frey BJ, Blencowe BJ (December 2008). "Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing". Nature Genetics. 40 (12): 1413–1415. doi:10.1038/ng.259. PMID 18978789. S2CID 9228930.
Eksi R, Li HD, Menon R, Wen Y, Omenn GS, Kretzler M, Guan Y (Nov 2013). "Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data". PLOS Computational Biology. 9 (11): e1003314. Bibcode:2013PLSCB...9E3314E. doi:10.1371/journal.pcbi.1003314. PMC 3820534. PMID 24244129.
Li HD, Menon R, Omenn GS, Guan Y (August 2014). "The emerging era of genomic data integration for analyzing splice isoform function". Trends in Genetics. 30 (8): 340–347. doi:10.1016/j.tig.2014.05.005. PMC 4112133. PMID 24951248.
Jain N, Morgan CE, Rife BD, Salemi M, Tolbert BS (January 2016). "Solution Structure of the HIV-1 Intron Splicing Silencer and Its Interactions with the UP1 Domain of Heterogeneous Nuclear Ribonucleoprotein (hnRNP) A1". The Journal of Biological Chemistry. 291 (5): 2331–2344. doi:10.1074/jbc.M115.674564. PMC 4732216. PMID 26607354.
Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG (July 2011). "Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes". Proceedings of the National Academy of Sciences of the United States of America. 108 (27): 11093–11098. Bibcode:2011PNAS..10811093H. doi:10.1073/pnas.1101135108. PMC 3131313. PMID 21685335.
Warf MB, Berglund JA (May 2024). "Role of RNA structure in regulating pre-mRNA splicing". Trends in Biochemical Sciences. 35 (8014): 169–178. doi:10.1016/j.tibs.2009.10.004. PMC 2834840. PMID 19959365.
Reid DC, Chang BL, Gunderson SI, Alpert L, Thompson WA, Fairbrother WG (December 2009). "Next-generation SELEX identifies sequence and structural determinants of splicing factor binding in human pre-mRNA sequence". RNA. 15 (12): 2385–2397. doi:10.1261/rna.1821809. PMC 2779669. PMID 19861426.
Bhat P, Chow A, Emert B, et al. (May 2024). "Genome organization around nuclear speckles drives mRNA splicing efficiency". Nature. 629 (5): 1165–1173. doi:10.1038/s41586-024-07429-6. PMC 11164319. PMID 38720076.
Singh PK, Plumb MR, Ferris AL, Iben JR, Wu X, Fadel HJ, et al. (November 2015). "LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes". Genes & Development. 29 (21): 2287–2297. doi:10.1101/gad.267609.115. PMC 4647561. PMID 26545813.
Shkreta L, Chabot B (October 2015). "The RNA Splicing Response to DNA Damage". Biomolecules. 5 (4): 2935–2977. doi:10.3390/biom5042935. PMC 4693264. PMID 26529031.
Draper BW, Morcos PA, Kimmel CB (July 2001). "Inhibition of zebrafish fgf8 pre-mRNA splicing with morpholino oligos: a quantifiable method for gene knockdown". Genesis. 30 (3): 154–156. doi:10.1002/gene.1053. PMID 11477696. S2CID 32270393.
Sazani P, Kang SH, Maier MA, Wei C, Dillman J, Summerton J, et al. (October 2001). "Nuclear antisense effects of neutral, anionic and cationic oligonucleotide analogs". Nucleic Acids Research. 29 (19): 3965–3974. doi:10.1093/nar/29.19.3965. PMC 60237. PMID 11574678.
Morcos PA (June 2007). "Achieving targeted and quantifiable alteration of mRNA splicing with Morpholino oligos". Biochemical and Biophysical Research Communications. 358 (2): 521–527. doi:10.1016/j.bbrc.2007.04.172. PMID 17493584.
Bruno IG, Jin W, Cote GJ (October 2004). "Correction of aberrant FGFR1 alternative RNA splicing through targeting of intronic regulatory elements". Human Molecular Genetics. 13 (20): 2409–2420. doi:10.1093/hmg/ddh272. PMID 15333583.
Fu XD, Ares M (October 2014). "Context-dependent control of alternative splicing by RNA-binding proteins". Nature Reviews. Genetics. 15 (10): 689–701. doi:10.1038/nrg3778. PMC 4440546. PMID 25112293.
Fu XD, Ares M (October 2014). "Context-dependent control of alternative splicing by RNA-binding proteins". Nature Reviews. Genetics. 15 (10): 689–701. doi:10.1038/nrg3778. PMC 4440546. PMID 25112293.
Danckwardt S, Neu-Yilik G, Thermann R, Frede U, Hentze MW, Kulozik AE (March 2002). "Abnormally spliced beta-globin mRNAs: a single point mutation generates transcripts sensitive and insensitive to nonsense-mediated mRNA decay". Blood. 99 (5): 1811–1816. doi:10.1182/blood.V99.5.1811. PMID 11861299. S2CID 17128174.
Ward AJ, Cooper TA (January 2010). "The pathobiology of splicing". The Journal of Pathology. 220 (2): 152–163. doi:10.1002/path.2649. PMC 2855871. PMID 19918805.
van Veen H, Vashisht D, Akman M, Girke T, Mustroph A, Reinen E, et al. (October 2016). "Transcriptomes of Eight Arabidopsis thaliana Accessions Reveal Core Conserved, Genotype- and Organ-Specific Responses to Flooding Stress". Plant Physiology. 172 (2): 668–689. doi:10.1104/pp.16.00472. PMC 5047075. PMID 27208254.
Hanada K, Yang JC (June 2005). "Novel biochemistry: post-translational protein splicing and other lessons from the school of antigen processing". Journal of Molecular Medicine. 83 (6): 420–428. doi:10.1007/s00109-005-0652-6. PMID 15759099. S2CID 37698110.

escholarship.org

Black DL (June 2003). "Mechanisms of alternative pre-messenger RNA splicing". Annual Review of Biochemistry. 72 (1): 291–336. doi:10.1146/annurev.biochem.72.121801.161720. PMID 12626338. S2CID 23576288.

harvard.edu

ui.adsabs.harvard.edu

Gilbert W (February 1978). "Why genes in pieces?". Nature. 271 (5645): 501. Bibcode:1978Natur.271..501G. doi:10.1038/271501a0. PMID 622185. S2CID 4216649.
Tonegawa S, Maxam AM, Tizard R, Bernard O, Gilbert W (March 1978). "Sequence of a mouse germ-line gene for a variable region of an immunoglobulin light chain". Proceedings of the National Academy of Sciences of the United States of America. 75 (3): 1485–1489. Bibcode:1978PNAS...75.1485T. doi:10.1073/pnas.75.3.1485. PMC 411497. PMID 418414.
Corvelo A, Hallegger M, Smith CW, Eyras E (November 2010). Meyer IM (ed.). "Genome-wide association between branch point properties and alternative splicing". PLOS Computational Biology. 6 (11): e1001016. Bibcode:2010PLSCB...6E1016C. doi:10.1371/journal.pcbi.1001016. PMC 2991248. PMID 21124863.
Sibley CR, Emmett W, Blazquez L, Faro A, Haberman N, Briese M, et al. (May 2015). "Recursive splicing in long vertebrate genes". Nature. 521 (7552): 371–375. Bibcode:2015Natur.521..371S. doi:10.1038/nature14466. PMC 4471124. PMID 25970246.
Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, et al. (May 2015). "Genome-wide identification of zero nucleotide recursive splicing in Drosophila". Nature. 521 (7552): 376–379. Bibcode:2015Natur.521..376D. doi:10.1038/nature14475. PMC 4529404. PMID 25970244.
Di Segni G, Gastaldi S, Tocchini-Valentini GP (May 2008). "Cis- and trans-splicing of mRNAs mediated by tRNA sequences in eukaryotic cells". Proceedings of the National Academy of Sciences of the United States of America. 105 (19): 6864–6869. Bibcode:2008PNAS..105.6864D. doi:10.1073/pnas.0800420105. JSTOR 25461891. PMC 2383978. PMID 18458335.
Fica SM, Tuttle N, Novak T, Li NS, Lu J, Koodathingal P, et al. (November 2013). "RNA catalyses nuclear pre-mRNA splicing". Nature. 503 (7475): 229–234. Bibcode:2013Natur.503..229F. doi:10.1038/nature12734. PMC 4666680. PMID 24196718.
Eksi R, Li HD, Menon R, Wen Y, Omenn GS, Kretzler M, Guan Y (Nov 2013). "Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data". PLOS Computational Biology. 9 (11): e1003314. Bibcode:2013PLSCB...9E3314E. doi:10.1371/journal.pcbi.1003314. PMC 3820534. PMID 24244129.
Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG (July 2011). "Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes". Proceedings of the National Academy of Sciences of the United States of America. 108 (27): 11093–11098. Bibcode:2011PNAS..10811093H. doi:10.1073/pnas.1101135108. PMC 3131313. PMID 21685335.

jbc.org

Westaway SK, Phizicky EM, Abelson J (March 1988). "Structure and function of the yeast tRNA ligase gene". The Journal of Biological Chemistry. 263 (7): 3171–3176. doi:10.1016/S0021-9258(18)69050-7. PMID 3277966. Archived from the original on 2018-11-18. Retrieved 2014-12-17.

jstor.org

Di Segni G, Gastaldi S, Tocchini-Valentini GP (May 2008). "Cis- and trans-splicing of mRNAs mediated by tRNA sequences in eukaryotic cells". Proceedings of the National Academy of Sciences of the United States of America. 105 (19): 6864–6869. Bibcode:2008PNAS..105.6864D. doi:10.1073/pnas.0800420105. JSTOR 25461891. PMC 2383978. PMID 18458335.

nature.com

Clancy S (2008). "RNA Splicing: Introns, Exons and Spliceosome". Nature Education. 1 (1): 31. Archived from the original on 15 March 2011. Retrieved 31 March 2011.

nih.gov

pubmed.ncbi.nlm.nih.gov

Gilbert W (February 1978). "Why genes in pieces?". Nature. 271 (5645): 501. Bibcode:1978Natur.271..501G. doi:10.1038/271501a0. PMID 622185. S2CID 4216649.
Tonegawa S, Maxam AM, Tizard R, Bernard O, Gilbert W (March 1978). "Sequence of a mouse germ-line gene for a variable region of an immunoglobulin light chain". Proceedings of the National Academy of Sciences of the United States of America. 75 (3): 1485–1489. Bibcode:1978PNAS...75.1485T. doi:10.1073/pnas.75.3.1485. PMC 411497. PMID 418414.
Tilgner H, Knowles DG, Johnson R, Davis CA, Chakrabortty S, Djebali S, et al. (September 2012). "Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs". Genome Research. 22 (9): 1616–1625. doi:10.1101/gr.134445.111. PMC 3431479. PMID 22955974.
Roy SW, Gilbert W (March 2006). "The evolution of spliceosomal introns: patterns, puzzles and progress". Nature Reviews. Genetics. 7 (3): 211–221. doi:10.1038/nrg1807. PMID 16485020. S2CID 33672491.
Black DL (June 2003). "Mechanisms of alternative pre-messenger RNA splicing". Annual Review of Biochemistry. 72 (1): 291–336. doi:10.1146/annurev.biochem.72.121801.161720. PMID 12626338. S2CID 23576288.
Taggart AJ, DeSimone AM, Shih JS, Filloux ME, Fairbrother WG (June 2012). "Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo". Nature Structural & Molecular Biology. 19 (7): 719–721. doi:10.1038/nsmb.2327. PMC 3465671. PMID 22705790.
Corvelo A, Hallegger M, Smith CW, Eyras E (November 2010). Meyer IM (ed.). "Genome-wide association between branch point properties and alternative splicing". PLOS Computational Biology. 6 (11): e1001016. Bibcode:2010PLSCB...6E1016C. doi:10.1371/journal.pcbi.1001016. PMC 2991248. PMID 21124863.
Graveley BR, Hertel KJ, Maniatis T (June 2001). "The role of U2AF35 and U2AF65 in enhancer-dependent splicing". RNA. 7 (6): 806–818. doi:10.1017/s1355838201010317. PMC 1370132. PMID 11421359. Archived from the original on 2018-11-20. Retrieved 2014-12-17.
Matlin AJ, Clark F, Smith CW (May 2005). "Understanding alternative splicing: towards a cellular code". Nature Reviews. Molecular Cell Biology. 6 (5): 386–398. doi:10.1038/nrm1645. PMID 15956978. S2CID 14883495.
Matera AG, Wang Z (February 2014). "A day in the life of the spliceosome". Nature Reviews. Molecular Cell Biology. 15 (2): 108–121. doi:10.1038/nrm3742. PMC 4060434. PMID 24452469.
Guth S, Valcárcel J (December 2000). "Kinetic role for mammalian SF1/BBP in spliceosome assembly and function after polypyrimidine tract recognition by U2AF". The Journal of Biological Chemistry. 275 (48): 38059–38066. doi:10.1074/jbc.M001483200. PMID 10954700.
Cheng Z, Menees TM (December 2011). "RNA splicing and debranching viewed through analysis of RNA lariats". Molecular Genetics and Genomics. 286 (5–6): 395–410. doi:10.1007/s00438-011-0635-y. PMID 22065066. S2CID 846297.
Ng B, Yang F, Huston DP, Yan Y, Yang Y, Xiong Z, et al. (December 2004). "Increased noncanonical splicing of autoantigen transcripts provides the structural basis for expression of untolerized epitopes". The Journal of Allergy and Clinical Immunology. 114 (6): 1463–1470. doi:10.1016/j.jaci.2004.09.006. PMC 3902068. PMID 15577853.
Patel AA, Steitz JA (December 2003). "Splicing double: insights from the second spliceosome". Nature Reviews. Molecular Cell Biology. 4 (12): 960–970. doi:10.1038/nrm1259. PMID 14685174. S2CID 21816910.
Sibley CR, Emmett W, Blazquez L, Faro A, Haberman N, Briese M, et al. (May 2015). "Recursive splicing in long vertebrate genes". Nature. 521 (7552): 371–375. Bibcode:2015Natur.521..371S. doi:10.1038/nature14466. PMC 4471124. PMID 25970246.
Duff MO, Olson S, Wei X, Garrett SC, Osman A, Bolisetty M, et al. (May 2015). "Genome-wide identification of zero nucleotide recursive splicing in Drosophila". Nature. 521 (7552): 376–379. Bibcode:2015Natur.521..376D. doi:10.1038/nature14475. PMC 4529404. PMID 25970244.
Di Segni G, Gastaldi S, Tocchini-Valentini GP (May 2008). "Cis- and trans-splicing of mRNAs mediated by tRNA sequences in eukaryotic cells". Proceedings of the National Academy of Sciences of the United States of America. 105 (19): 6864–6869. Bibcode:2008PNAS..105.6864D. doi:10.1073/pnas.0800420105. JSTOR 25461891. PMC 2383978. PMID 18458335.
Eul J, Patzel V (November 2013). "Homologous SV40 RNA trans-splicing: a new mechanism for diversification of viral sequences and phenotypes". RNA Biology. 10 (11): 1689–1699. doi:10.4161/rna.26707. PMC 3907479. PMID 24178438.
Trotta CR, Miao F, Arn EA, Stevens SW, Ho CK, Rauhut R, Abelson JN (June 1997). "The yeast tRNA splicing endonuclease: a tetrameric enzyme with two active site subunits homologous to the archaeal tRNA endonucleases". Cell. 89 (6): 849–858. doi:10.1016/S0092-8674(00)80270-6. PMID 9200603. S2CID 16055381.
Westaway SK, Phizicky EM, Abelson J (March 1988). "Structure and function of the yeast tRNA ligase gene". The Journal of Biological Chemistry. 263 (7): 3171–3176. doi:10.1016/S0021-9258(18)69050-7. PMID 3277966. Archived from the original on 2018-11-18. Retrieved 2014-12-17.
Paushkin SV, Patel M, Furia BS, Peltz SW, Trotta CR (April 2004). "Identification of a human endonuclease complex reveals a link between tRNA splicing and pre-mRNA 3' end formation". Cell. 117 (3): 311–321. doi:10.1016/S0092-8674(04)00342-3. PMID 15109492. S2CID 16049289.
Soma A (1 April 2014). "Circularly permuted tRNA genes: their expression and implications for their physiological relevance and development". Frontiers in Genetics. 5: 63. doi:10.3389/fgene.2014.00063. PMC 3978253. PMID 24744771.
Abelson J, Trotta CR, Li H (May 1998). "tRNA splicing". The Journal of Biological Chemistry. 273 (21): 12685–12688. doi:10.1074/jbc.273.21.12685. PMID 9582290.
Fica SM, Tuttle N, Novak T, Li NS, Lu J, Koodathingal P, et al. (November 2013). "RNA catalyses nuclear pre-mRNA splicing". Nature. 503 (7475): 229–234. Bibcode:2013Natur.503..229F. doi:10.1038/nature12734. PMC 4666680. PMID 24196718.
Pan Q, Shai O, Lee LJ, Frey BJ, Blencowe BJ (December 2008). "Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing". Nature Genetics. 40 (12): 1413–1415. doi:10.1038/ng.259. PMID 18978789. S2CID 9228930.
Eksi R, Li HD, Menon R, Wen Y, Omenn GS, Kretzler M, Guan Y (Nov 2013). "Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data". PLOS Computational Biology. 9 (11): e1003314. Bibcode:2013PLSCB...9E3314E. doi:10.1371/journal.pcbi.1003314. PMC 3820534. PMID 24244129.
Li HD, Menon R, Omenn GS, Guan Y (August 2014). "The emerging era of genomic data integration for analyzing splice isoform function". Trends in Genetics. 30 (8): 340–347. doi:10.1016/j.tig.2014.05.005. PMC 4112133. PMID 24951248.
Jain N, Morgan CE, Rife BD, Salemi M, Tolbert BS (January 2016). "Solution Structure of the HIV-1 Intron Splicing Silencer and Its Interactions with the UP1 Domain of Heterogeneous Nuclear Ribonucleoprotein (hnRNP) A1". The Journal of Biological Chemistry. 291 (5): 2331–2344. doi:10.1074/jbc.M115.674564. PMC 4732216. PMID 26607354.
Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG (July 2011). "Using positional distribution to identify splicing elements and predict pre-mRNA processing defects in human genes". Proceedings of the National Academy of Sciences of the United States of America. 108 (27): 11093–11098. Bibcode:2011PNAS..10811093H. doi:10.1073/pnas.1101135108. PMC 3131313. PMID 21685335.
Warf MB, Berglund JA (May 2024). "Role of RNA structure in regulating pre-mRNA splicing". Trends in Biochemical Sciences. 35 (8014): 169–178. doi:10.1016/j.tibs.2009.10.004. PMC 2834840. PMID 19959365.
Reid DC, Chang BL, Gunderson SI, Alpert L, Thompson WA, Fairbrother WG (December 2009). "Next-generation SELEX identifies sequence and structural determinants of splicing factor binding in human pre-mRNA sequence". RNA. 15 (12): 2385–2397. doi:10.1261/rna.1821809. PMC 2779669. PMID 19861426.
Bhat P, Chow A, Emert B, et al. (May 2024). "Genome organization around nuclear speckles drives mRNA splicing efficiency". Nature. 629 (5): 1165–1173. doi:10.1038/s41586-024-07429-6. PMC 11164319. PMID 38720076.
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