Ribosomal pause (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Ribosomal pause" in English language version.

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Li GW, Oh E, Weissman JS (March 2012). "The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria". Nature. 484 (7395): 538–41. Bibcode:2012Natur.484..538L. doi:10.1038/nature10965. PMC 3338875. PMID 22456704.

doi.org

Gawroński P, Jensen PE, Karpiński S, Leister D, Scharff LB (March 2018). "Pausing of Chloroplast Ribosomes Is Induced by Multiple Features and Is Linked to the Assembly of Photosynthetic Complexes". Plant Physiology. 176 (3): 2557–2569. doi:10.1104/pp.17.01564. PMC 5841727. PMID 29298822.
Li GW, Oh E, Weissman JS (March 2012). "The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria". Nature. 484 (7395): 538–41. Bibcode:2012Natur.484..538L. doi:10.1038/nature10965. PMC 3338875. PMID 22456704.
Lopinski JD, Dinman JD, Bruenn JA (February 2000). "Kinetics of ribosomal pausing during programmed -1 translational frameshifting". Molecular and Cellular Biology. 20 (4): 1095–103. doi:10.1128/MCB.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk, Allen R.; Green, Rachel (19 March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society B: Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Kontos H, Napthine S, Brierley I (December 2001). "Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency". Molecular and Cellular Biology. 21 (24): 8657–70. doi:10.1128/MCB.21.24.8657-8670.2001. PMC 100026. PMID 11713298.
Jha SS, Komar AA (July 2012). "Isolation of ribosome bound nascent polypeptides in vitro to identify translational pause sites along mRNA". Journal of Visualized Experiments (65). doi:10.3791/4026. PMC 3471273. PMID 22806127.
Kim JK, Hollingsworth MJ (October 1992). "Localization of in vivo ribosome pause sites". Analytical Biochemistry. 206 (1): 183–8. doi:10.1016/s0003-2697(05)80031-4. PMID 1456432.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS (February 2012). "High-resolution view of the yeast meiotic program revealed by ribosome profiling". Science. 335 (6068): 552–7. Bibcode:2012Sci...335..552B. doi:10.1126/science.1215110. PMC 3414261. PMID 22194413.
Darnell AM, Subramaniam AR, O'Shea EK (July 2018). "Translational Control through Differential Ribosome Pausing during Amino Acid Limitation in Mammalian Cells". Molecular Cell. 71 (2): 229–243.e11. doi:10.1016/j.molcel.2018.06.041. PMC 6516488. PMID 30029003.
Buchan JR, Stansfield I (September 2007). "Halting a cellular production line: responses to ribosomal pausing during translation". Biology of the Cell. 99 (9): 475–87. doi:10.1042/BC20070037. PMID 17696878.
Collart MA, Weiss B (February 2020). "Ribosome pausing, a dangerous necessity for co-translational events". Nucleic Acids Research. 48 (3): 1043–1055. doi:10.1093/nar/gkz763. PMC 7026645. PMID 31598688.
Chan, KH; Petrychenko, V; Mueller, C; Maracci, C; Holtkamp, W; Wilson, DN; Fischer, N; Rodnina, MV (14 August 2020). "Mechanism of ribosome rescue by alternative ribosome-rescue factor B." Nature Communications. 11 (1): 4106. Bibcode:2020NatCo..11.4106C. doi:10.1038/s41467-020-17853-7. PMC 7427801. PMID 32796827.
Carbone, Christine E.; Demo, Gabriel; Madireddy, Rohini; Svidritskiy, Egor; Korostelev, Andrei A. (December 2020). "ArfB can displace mRNA to rescue stalled ribosomes". Nature Communications. 11 (1): 5552. Bibcode:2020NatCo..11.5552C. doi:10.1038/s41467-020-19370-z. PMC 7641280. PMID 33144582.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Manjunath H, Zhang H, Rehfeld F, Han J, Chang TC, Mendell JT (December 2019). "Suppression of Ribosomal Pausing by eIF5A Is Necessary to Maintain the Fidelity of Start Codon Selection". Cell Reports. 29 (10): 3134–3146.e6. doi:10.1016/j.celrep.2019.10.129. PMC 6917043. PMID 31801078.
Somogyi P, Jenner AJ, Brierley I, Inglis SC (November 1993). "Ribosomal pausing during translation of an RNA pseudoknot". Molecular and Cellular Biology. 13 (11): 6931–40. doi:10.1128/mcb.13.11.6931. PMC 364755. PMID 8413285.
Lopinski, John D.; Dinman, Jonathan D.; Bruenn, Jeremy A. (2000). "Kinetics of Ribosomal Pausing during Programmed −1 Translational Frameshifting". Molecular and Cellular Biology. 20 (4): 1095–1103. doi:10.1128/mcb.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk AR, Green R (March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Brar GA, Weissman JS (November 2015). "Ribosome profiling reveals the what, when, where and how of protein synthesis". Nature Reviews. Molecular Cell Biology. 16 (11): 651–64. doi:10.1038/nrm4069. PMC 5522010. PMID 26465719.

harvard.edu

ui.adsabs.harvard.edu

Li GW, Oh E, Weissman JS (March 2012). "The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria". Nature. 484 (7395): 538–41. Bibcode:2012Natur.484..538L. doi:10.1038/nature10965. PMC 3338875. PMID 22456704.
Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS (February 2012). "High-resolution view of the yeast meiotic program revealed by ribosome profiling". Science. 335 (6068): 552–7. Bibcode:2012Sci...335..552B. doi:10.1126/science.1215110. PMC 3414261. PMID 22194413.
Chan, KH; Petrychenko, V; Mueller, C; Maracci, C; Holtkamp, W; Wilson, DN; Fischer, N; Rodnina, MV (14 August 2020). "Mechanism of ribosome rescue by alternative ribosome-rescue factor B." Nature Communications. 11 (1): 4106. Bibcode:2020NatCo..11.4106C. doi:10.1038/s41467-020-17853-7. PMC 7427801. PMID 32796827.
Carbone, Christine E.; Demo, Gabriel; Madireddy, Rohini; Svidritskiy, Egor; Korostelev, Andrei A. (December 2020). "ArfB can displace mRNA to rescue stalled ribosomes". Nature Communications. 11 (1): 5552. Bibcode:2020NatCo..11.5552C. doi:10.1038/s41467-020-19370-z. PMC 7641280. PMID 33144582.

nih.gov

pubmed.ncbi.nlm.nih.gov

Gawroński P, Jensen PE, Karpiński S, Leister D, Scharff LB (March 2018). "Pausing of Chloroplast Ribosomes Is Induced by Multiple Features and Is Linked to the Assembly of Photosynthetic Complexes". Plant Physiology. 176 (3): 2557–2569. doi:10.1104/pp.17.01564. PMC 5841727. PMID 29298822.
Li GW, Oh E, Weissman JS (March 2012). "The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria". Nature. 484 (7395): 538–41. Bibcode:2012Natur.484..538L. doi:10.1038/nature10965. PMC 3338875. PMID 22456704.
Lopinski JD, Dinman JD, Bruenn JA (February 2000). "Kinetics of ribosomal pausing during programmed -1 translational frameshifting". Molecular and Cellular Biology. 20 (4): 1095–103. doi:10.1128/MCB.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk, Allen R.; Green, Rachel (19 March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society B: Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Kontos H, Napthine S, Brierley I (December 2001). "Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency". Molecular and Cellular Biology. 21 (24): 8657–70. doi:10.1128/MCB.21.24.8657-8670.2001. PMC 100026. PMID 11713298.
Jha SS, Komar AA (July 2012). "Isolation of ribosome bound nascent polypeptides in vitro to identify translational pause sites along mRNA". Journal of Visualized Experiments (65). doi:10.3791/4026. PMC 3471273. PMID 22806127.
Kim JK, Hollingsworth MJ (October 1992). "Localization of in vivo ribosome pause sites". Analytical Biochemistry. 206 (1): 183–8. doi:10.1016/s0003-2697(05)80031-4. PMID 1456432.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS (February 2012). "High-resolution view of the yeast meiotic program revealed by ribosome profiling". Science. 335 (6068): 552–7. Bibcode:2012Sci...335..552B. doi:10.1126/science.1215110. PMC 3414261. PMID 22194413.
Darnell AM, Subramaniam AR, O'Shea EK (July 2018). "Translational Control through Differential Ribosome Pausing during Amino Acid Limitation in Mammalian Cells". Molecular Cell. 71 (2): 229–243.e11. doi:10.1016/j.molcel.2018.06.041. PMC 6516488. PMID 30029003.
Buchan JR, Stansfield I (September 2007). "Halting a cellular production line: responses to ribosomal pausing during translation". Biology of the Cell. 99 (9): 475–87. doi:10.1042/BC20070037. PMID 17696878.
Collart MA, Weiss B (February 2020). "Ribosome pausing, a dangerous necessity for co-translational events". Nucleic Acids Research. 48 (3): 1043–1055. doi:10.1093/nar/gkz763. PMC 7026645. PMID 31598688.
Chan, KH; Petrychenko, V; Mueller, C; Maracci, C; Holtkamp, W; Wilson, DN; Fischer, N; Rodnina, MV (14 August 2020). "Mechanism of ribosome rescue by alternative ribosome-rescue factor B." Nature Communications. 11 (1): 4106. Bibcode:2020NatCo..11.4106C. doi:10.1038/s41467-020-17853-7. PMC 7427801. PMID 32796827.
Carbone, Christine E.; Demo, Gabriel; Madireddy, Rohini; Svidritskiy, Egor; Korostelev, Andrei A. (December 2020). "ArfB can displace mRNA to rescue stalled ribosomes". Nature Communications. 11 (1): 5552. Bibcode:2020NatCo..11.5552C. doi:10.1038/s41467-020-19370-z. PMC 7641280. PMID 33144582.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Manjunath H, Zhang H, Rehfeld F, Han J, Chang TC, Mendell JT (December 2019). "Suppression of Ribosomal Pausing by eIF5A Is Necessary to Maintain the Fidelity of Start Codon Selection". Cell Reports. 29 (10): 3134–3146.e6. doi:10.1016/j.celrep.2019.10.129. PMC 6917043. PMID 31801078.
Somogyi P, Jenner AJ, Brierley I, Inglis SC (November 1993). "Ribosomal pausing during translation of an RNA pseudoknot". Molecular and Cellular Biology. 13 (11): 6931–40. doi:10.1128/mcb.13.11.6931. PMC 364755. PMID 8413285.
Lopinski, John D.; Dinman, Jonathan D.; Bruenn, Jeremy A. (2000). "Kinetics of Ribosomal Pausing during Programmed −1 Translational Frameshifting". Molecular and Cellular Biology. 20 (4): 1095–1103. doi:10.1128/mcb.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk AR, Green R (March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Brar GA, Weissman JS (November 2015). "Ribosome profiling reveals the what, when, where and how of protein synthesis". Nature Reviews. Molecular Cell Biology. 16 (11): 651–64. doi:10.1038/nrm4069. PMC 5522010. PMID 26465719.

ncbi.nlm.nih.gov

Gawroński P, Jensen PE, Karpiński S, Leister D, Scharff LB (March 2018). "Pausing of Chloroplast Ribosomes Is Induced by Multiple Features and Is Linked to the Assembly of Photosynthetic Complexes". Plant Physiology. 176 (3): 2557–2569. doi:10.1104/pp.17.01564. PMC 5841727. PMID 29298822.
Li GW, Oh E, Weissman JS (March 2012). "The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria". Nature. 484 (7395): 538–41. Bibcode:2012Natur.484..538L. doi:10.1038/nature10965. PMC 3338875. PMID 22456704.
Lopinski JD, Dinman JD, Bruenn JA (February 2000). "Kinetics of ribosomal pausing during programmed -1 translational frameshifting". Molecular and Cellular Biology. 20 (4): 1095–103. doi:10.1128/MCB.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk, Allen R.; Green, Rachel (19 March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society B: Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Kontos H, Napthine S, Brierley I (December 2001). "Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency". Molecular and Cellular Biology. 21 (24): 8657–70. doi:10.1128/MCB.21.24.8657-8670.2001. PMC 100026. PMID 11713298.
Jha SS, Komar AA (July 2012). "Isolation of ribosome bound nascent polypeptides in vitro to identify translational pause sites along mRNA". Journal of Visualized Experiments (65). doi:10.3791/4026. PMC 3471273. PMID 22806127.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Brar GA, Yassour M, Friedman N, Regev A, Ingolia NT, Weissman JS (February 2012). "High-resolution view of the yeast meiotic program revealed by ribosome profiling". Science. 335 (6068): 552–7. Bibcode:2012Sci...335..552B. doi:10.1126/science.1215110. PMC 3414261. PMID 22194413.
Darnell AM, Subramaniam AR, O'Shea EK (July 2018). "Translational Control through Differential Ribosome Pausing during Amino Acid Limitation in Mammalian Cells". Molecular Cell. 71 (2): 229–243.e11. doi:10.1016/j.molcel.2018.06.041. PMC 6516488. PMID 30029003.
Collart MA, Weiss B (February 2020). "Ribosome pausing, a dangerous necessity for co-translational events". Nucleic Acids Research. 48 (3): 1043–1055. doi:10.1093/nar/gkz763. PMC 7026645. PMID 31598688.
Chan, KH; Petrychenko, V; Mueller, C; Maracci, C; Holtkamp, W; Wilson, DN; Fischer, N; Rodnina, MV (14 August 2020). "Mechanism of ribosome rescue by alternative ribosome-rescue factor B." Nature Communications. 11 (1): 4106. Bibcode:2020NatCo..11.4106C. doi:10.1038/s41467-020-17853-7. PMC 7427801. PMID 32796827.
Carbone, Christine E.; Demo, Gabriel; Madireddy, Rohini; Svidritskiy, Egor; Korostelev, Andrei A. (December 2020). "ArfB can displace mRNA to rescue stalled ribosomes". Nature Communications. 11 (1): 5552. Bibcode:2020NatCo..11.5552C. doi:10.1038/s41467-020-19370-z. PMC 7641280. PMID 33144582.
Wolin SL, Walter P (November 1988). "Ribosome pausing and stacking during translation of a eukaryotic mRNA". The EMBO Journal. 7 (11): 3559–69. doi:10.1002/j.1460-2075.1988.tb03233.x. PMC 454858. PMID 2850168.
Manjunath H, Zhang H, Rehfeld F, Han J, Chang TC, Mendell JT (December 2019). "Suppression of Ribosomal Pausing by eIF5A Is Necessary to Maintain the Fidelity of Start Codon Selection". Cell Reports. 29 (10): 3134–3146.e6. doi:10.1016/j.celrep.2019.10.129. PMC 6917043. PMID 31801078.
Somogyi P, Jenner AJ, Brierley I, Inglis SC (November 1993). "Ribosomal pausing during translation of an RNA pseudoknot". Molecular and Cellular Biology. 13 (11): 6931–40. doi:10.1128/mcb.13.11.6931. PMC 364755. PMID 8413285.
Lopinski, John D.; Dinman, Jonathan D.; Bruenn, Jeremy A. (2000). "Kinetics of Ribosomal Pausing during Programmed −1 Translational Frameshifting". Molecular and Cellular Biology. 20 (4): 1095–1103. doi:10.1128/mcb.20.4.1095-1103.2000. PMC 85227. PMID 10648594.
Buskirk AR, Green R (March 2017). "Ribosome pausing, arrest and rescue in bacteria and eukaryotes". Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 372 (1716): 20160183. doi:10.1098/rstb.2016.0183. PMC 5311927. PMID 28138069.
Brar GA, Weissman JS (November 2015). "Ribosome profiling reveals the what, when, where and how of protein synthesis". Nature Reviews. Molecular Cell Biology. 16 (11): 651–64. doi:10.1038/nrm4069. PMC 5522010. PMID 26465719.