Ron Shamir (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Ron Shamir" in English language version.

refsWebsite

Global rank English rank

24nih.gov

4^th place

23doi.org

2^nd place

10psu.edu

207^th place

136^th place

3harvard.edu

18^th place

17^th place

2web.archive.org

1^st place

2worldcat.org

5^th place

2recomb.org

low place

2tau.ac.il

4,464^th place

4,468^th place

1iscb.org

low place

1mathgenealogy.org

4,501^st place

3,002^nd place

1zenodo.org

621^st place

380^th place

1semanticscholar.org

11^th place

8^th place

1oup.com

485^th place

440^th place

1acm.org

1,185^th place

840^th place

1pais.co.il

low place

acm.org

awards.acm.org

ACM fellow profile, Association for Computing Machinery

doi.org

Ben-Dor, A.; Shamir, R.; Yakhini, Z. (1999), "Clustering gene expression patterns", Journal of Computational Biology, 6 (3–4): 281–297, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
Sharan, R.; Maron-Katz, A.; Shamir, R. (2000), "CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis", Intelligent Systems in Molecular Biology, 19 (14): 307–316, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350.
- Tanay, A.; Sharan, R.; Shamir, R. (2000), "Discovering statistically significant biclusters in gene expression data", Bioinformatics, 18 (1): S136 – S144, doi:10.1093/bioinformatics/18.suppl_1.S136, PMID 12169541
- Sharan, R.; Maron-Katz, A.; Shamir, R. (2003), "CLICK and EXPANDER: a system for clustering and visualizing gene expression data", Bioinformatics, 19 (14): 1787–1799, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350
- Ulitsky, Igor; Maron-Katz, Adi; Shavit, Seagull; Sagir, Dorit; Linhart, Chaim; Elkon, Ran; Tanay, Amos; Sharan, Roded; Shiloh, Yosef; Shamir, Ron (2010), "Expander: From expression microarrays to networks and functions", Nature Protocols, 5 (2): 303–22, doi:10.1038/nprot.2009.230, PMID 20134430, S2CID 3504270
- Adler, Ilan; Karp, Richard M.; Shamir, Ron (1987), "A simplex variant solving an m × d linear program in O(min(m^2, d^2)) expected number of pivot steps", Journal of Complexity, 3 (4): 372–387, doi:10.1016/0885-064X(87)90007-0
- Hochbaum, Dorit S.; Shamir, Ron (1991). "Strongly Polynomial Algorithms for the High Multiplicity Scheduling Problem". Operations Research. 39 (4): 648–653. doi:10.1287/opre.39.4.648. ISSN 0030-364X.
- Golumbic, Martin Charles; Kaplan, Haim; Shamir, Ron (1995), "Graph Sandwich Problems", Journal of Algorithms, 19 (3): 449–473, CiteSeerX 10.1.1.12.8158, doi:10.1006/jagm.1995.1047
- Kaplan, Haim; Shamir, Ron (1996), "Pathwidth, Bandwidth, and Completion Problems to Proper Interval Graphs with Small Cliques", SIAM Journal on Computing, 25 (3): 540–561, CiteSeerX 10.1.1.34.9275, doi:10.1137/S0097539793258143
- Kaplan, Haim; Shamir, Ron; Tarjan, Robert E. (1999), "Tractability of Parameterized Completion Problems on Chordal, Strongly Chordal, and Proper Interval Graphs", SIAM Journal on Computing, 28 (5): 1906–1922, CiteSeerX 10.1.1.12.2803, doi:10.1137/S0097539796303044
- Golumbic, M.C.; Kaplan, H.; Shamir, R. (1994), "On the Complexity of DNA Physical Mapping", Advances in Applied Mathematics, 15 (3): 251–261, doi:10.1006/aama.1994.1009
- Hartuv, E.; Shamir, R. (2000), "A clustering algorithm based on graph connectivity", Information Processing Letters, 76 (4–6): 175–181, CiteSeerX 10.1.1.17.1450, doi:10.1016/S0020-0190(00)00142-3
- Ben-Dor, Amir; Shamir, Ron; Yakhini, Zohar (1999), "Clustering Gene Expression Patterns", Journal of Computational Biology, 6 (3–4): 281–97, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
- Tanay, A.; Sharan, R.; Shamir, R. (2000), "Discovering statistically significant biclusters in gene expression data", Bioinformatics, 18 (1): S136 – S144, doi:10.1093/bioinformatics/18.suppl_1.S136, PMID 12169541
- Ulitsky, I.; Shamir, R. (2007), "Identification of functional modules using network topology and high-throughput data", BMC Systems Biology, 1 (8): 8, doi:10.1186/1752-0509-1-8, PMC 1839897, PMID 17408515
- Mueller, F.J.; Williams, R.; Kostka, D.; Laurent, L.; Ulitsky, I.; Lu, C.; Rao, M.S.; Shamir, R.; Schwartz, P.H.; Schmidt, N.O.; Loring, J.F. (2008), "Regulatory networks define phenotypic classes of human stem cell lines", Nature, 455 (7211): 401–405, Bibcode:2008Natur.455..401M, doi:10.1038/nature07213, PMC 2637443, PMID 18724358
- Kaplan, H.; Shamir, R.; Tarjan, R.E. (1999), "A Faster and Simpler Algorithm for Sorting Signed Permutations by Reversals", SIAM Journal on Computing, 29 (3): 880–892, CiteSeerX 10.1.1.43.5245, doi:10.1137/s0097539798334207
- Elkon, R.; Linhart, C.; Sharan, R.; Shamir, R.; Shiloh, Y. (2003), "Genome-Wide In Silico Identification of Transcriptional Regulators Controlling the Cell Cycle in Human Cells", Genome Research, 13 (5): 773–780, doi:10.1101/gr.947203, PMC 430898, PMID 12727897
- Linhart, C.; Halperin, Y.; Shamir, R. (2008), "Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets", Genome Research, 18 (7): 1180–1189, doi:10.1101/gr.076117.108, PMC 2493407, PMID 18411406
- Tanay, A.; Regev, A.; Shamir, R. (2005), "Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast", Proceedings of the National Academy of Sciences USA, 102 (20): 7203–7208, Bibcode:2005PNAS..102.7203T, doi:10.1073/pnas.0502521102, PMC 1091753, PMID 15883364
- Belle, A.; Tanay, A.; Bitincka, L.; Shamir, R.; O'Shea, E.K. (2006), "Quantification of protein half-lives in the budding yeast proteome", Proceedings of the National Academy of Sciences USA, 103 (35): 13004–9, Bibcode:2006PNAS..10313004B, doi:10.1073/pnas.0605420103, PMC 1550773, PMID 16916930
- Paz, Arnon; Brownstein Zippora; Ber Yaara; Bialik Shani; David Eyal; Sagir Dorit; Ulitsky Igor; Elkon Ran; Kimchi Adi; Avraham Karen B; Shiloh Yosef; Shamir Ron (Jan 2011). "SPIKE: a database of highly curated human signaling pathways". Nucleic Acids Res. 39 (Database issue). England: D793-9. doi:10.1093/nar/gkq1167. PMC 3014840. PMID 21097778.
- Fogg, Christina (2022). "2022 ISCB Accomplishments by a Senior Scientist Award: Ron Shamir". Bioinformatics. 38 (Suppl 1): i1 – i2. doi:10.1093/bioinformatics/btac339. PMC 9236576. PMID 35758791. Retrieved 2023-06-04.
- Sharan, Roded; Ideker, Trey; Kelley, Brian; Shamir, Ron; Karp, Richard M. (July 2005). "Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data". Journal of Computational Biology. 12 (6): 835–846. CiteSeerX 10.1.1.139.231. doi:10.1089/cmb.2005.12.835. ISSN 1066-5277. PMID 16108720.

harvard.edu

ui.adsabs.harvard.edu

Mueller, F.J.; Williams, R.; Kostka, D.; Laurent, L.; Ulitsky, I.; Lu, C.; Rao, M.S.; Shamir, R.; Schwartz, P.H.; Schmidt, N.O.; Loring, J.F. (2008), "Regulatory networks define phenotypic classes of human stem cell lines", Nature, 455 (7211): 401–405, Bibcode:2008Natur.455..401M, doi:10.1038/nature07213, PMC 2637443, PMID 18724358
Tanay, A.; Regev, A.; Shamir, R. (2005), "Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast", Proceedings of the National Academy of Sciences USA, 102 (20): 7203–7208, Bibcode:2005PNAS..102.7203T, doi:10.1073/pnas.0502521102, PMC 1091753, PMID 15883364
Belle, A.; Tanay, A.; Bitincka, L.; Shamir, R.; O'Shea, E.K. (2006), "Quantification of protein half-lives in the budding yeast proteome", Proceedings of the National Academy of Sciences USA, 103 (35): 13004–9, Bibcode:2006PNAS..10313004B, doi:10.1073/pnas.0605420103, PMC 1550773, PMID 16916930

iscb.org

Anon (2017). "ISCB Fellows". iscb.org. International Society for Computational Biology. Archived from the original on 2017-03-20.

mathgenealogy.org

Ron Shamir at the Mathematics Genealogy Project

nih.gov

pubmed.ncbi.nlm.nih.gov

Ben-Dor, A.; Shamir, R.; Yakhini, Z. (1999), "Clustering gene expression patterns", Journal of Computational Biology, 6 (3–4): 281–297, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
Sharan, R.; Maron-Katz, A.; Shamir, R. (2000), "CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis", Intelligent Systems in Molecular Biology, 19 (14): 307–316, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350.
- Tanay, A.; Sharan, R.; Shamir, R. (2000), "Discovering statistically significant biclusters in gene expression data", Bioinformatics, 18 (1): S136 – S144, doi:10.1093/bioinformatics/18.suppl_1.S136, PMID 12169541
- Sharan, R.; Maron-Katz, A.; Shamir, R. (2003), "CLICK and EXPANDER: a system for clustering and visualizing gene expression data", Bioinformatics, 19 (14): 1787–1799, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350
- Ulitsky, Igor; Maron-Katz, Adi; Shavit, Seagull; Sagir, Dorit; Linhart, Chaim; Elkon, Ran; Tanay, Amos; Sharan, Roded; Shiloh, Yosef; Shamir, Ron (2010), "Expander: From expression microarrays to networks and functions", Nature Protocols, 5 (2): 303–22, doi:10.1038/nprot.2009.230, PMID 20134430, S2CID 3504270
- Ben-Dor, Amir; Shamir, Ron; Yakhini, Zohar (1999), "Clustering Gene Expression Patterns", Journal of Computational Biology, 6 (3–4): 281–97, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
- Sharan, R.; Shamir, R. (2000), "CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis", Proceedings ISMB '00, 8: 307–316C, PMID 10977092
- Tanay, A.; Sharan, R.; Shamir, R. (2000), "Discovering statistically significant biclusters in gene expression data", Bioinformatics, 18 (1): S136 – S144, doi:10.1093/bioinformatics/18.suppl_1.S136, PMID 12169541
- Ulitsky, I.; Shamir, R. (2007), "Identification of functional modules using network topology and high-throughput data", BMC Systems Biology, 1 (8): 8, doi:10.1186/1752-0509-1-8, PMC 1839897, PMID 17408515
- Mueller, F.J.; Williams, R.; Kostka, D.; Laurent, L.; Ulitsky, I.; Lu, C.; Rao, M.S.; Shamir, R.; Schwartz, P.H.; Schmidt, N.O.; Loring, J.F. (2008), "Regulatory networks define phenotypic classes of human stem cell lines", Nature, 455 (7211): 401–405, Bibcode:2008Natur.455..401M, doi:10.1038/nature07213, PMC 2637443, PMID 18724358
- Elkon, R.; Linhart, C.; Sharan, R.; Shamir, R.; Shiloh, Y. (2003), "Genome-Wide In Silico Identification of Transcriptional Regulators Controlling the Cell Cycle in Human Cells", Genome Research, 13 (5): 773–780, doi:10.1101/gr.947203, PMC 430898, PMID 12727897
- Linhart, C.; Halperin, Y.; Shamir, R. (2008), "Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets", Genome Research, 18 (7): 1180–1189, doi:10.1101/gr.076117.108, PMC 2493407, PMID 18411406
- Tanay, A.; Regev, A.; Shamir, R. (2005), "Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast", Proceedings of the National Academy of Sciences USA, 102 (20): 7203–7208, Bibcode:2005PNAS..102.7203T, doi:10.1073/pnas.0502521102, PMC 1091753, PMID 15883364
- Belle, A.; Tanay, A.; Bitincka, L.; Shamir, R.; O'Shea, E.K. (2006), "Quantification of protein half-lives in the budding yeast proteome", Proceedings of the National Academy of Sciences USA, 103 (35): 13004–9, Bibcode:2006PNAS..10313004B, doi:10.1073/pnas.0605420103, PMC 1550773, PMID 16916930
- Paz, Arnon; Brownstein Zippora; Ber Yaara; Bialik Shani; David Eyal; Sagir Dorit; Ulitsky Igor; Elkon Ran; Kimchi Adi; Avraham Karen B; Shiloh Yosef; Shamir Ron (Jan 2011). "SPIKE: a database of highly curated human signaling pathways". Nucleic Acids Res. 39 (Database issue). England: D793-9. doi:10.1093/nar/gkq1167. PMC 3014840. PMID 21097778.
- Fogg, Christina (2022). "2022 ISCB Accomplishments by a Senior Scientist Award: Ron Shamir". Bioinformatics. 38 (Suppl 1): i1 – i2. doi:10.1093/bioinformatics/btac339. PMC 9236576. PMID 35758791. Retrieved 2023-06-04.
- Sharan, Roded; Ideker, Trey; Kelley, Brian; Shamir, Ron; Karp, Richard M. (July 2005). "Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data". Journal of Computational Biology. 12 (6): 835–846. CiteSeerX 10.1.1.139.231. doi:10.1089/cmb.2005.12.835. ISSN 1066-5277. PMID 16108720.
ncbi.nlm.nih.gov
- Ulitsky, I.; Shamir, R. (2007), "Identification of functional modules using network topology and high-throughput data", BMC Systems Biology, 1 (8): 8, doi:10.1186/1752-0509-1-8, PMC 1839897, PMID 17408515
- Mueller, F.J.; Williams, R.; Kostka, D.; Laurent, L.; Ulitsky, I.; Lu, C.; Rao, M.S.; Shamir, R.; Schwartz, P.H.; Schmidt, N.O.; Loring, J.F. (2008), "Regulatory networks define phenotypic classes of human stem cell lines", Nature, 455 (7211): 401–405, Bibcode:2008Natur.455..401M, doi:10.1038/nature07213, PMC 2637443, PMID 18724358
- Elkon, R.; Linhart, C.; Sharan, R.; Shamir, R.; Shiloh, Y. (2003), "Genome-Wide In Silico Identification of Transcriptional Regulators Controlling the Cell Cycle in Human Cells", Genome Research, 13 (5): 773–780, doi:10.1101/gr.947203, PMC 430898, PMID 12727897
- Linhart, C.; Halperin, Y.; Shamir, R. (2008), "Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets", Genome Research, 18 (7): 1180–1189, doi:10.1101/gr.076117.108, PMC 2493407, PMID 18411406
- Tanay, A.; Regev, A.; Shamir, R. (2005), "Conservation and evolvability in regulatory networks: The evolution of ribosomal regulation in yeast", Proceedings of the National Academy of Sciences USA, 102 (20): 7203–7208, Bibcode:2005PNAS..102.7203T, doi:10.1073/pnas.0502521102, PMC 1091753, PMID 15883364
- Belle, A.; Tanay, A.; Bitincka, L.; Shamir, R.; O'Shea, E.K. (2006), "Quantification of protein half-lives in the budding yeast proteome", Proceedings of the National Academy of Sciences USA, 103 (35): 13004–9, Bibcode:2006PNAS..10313004B, doi:10.1073/pnas.0605420103, PMC 1550773, PMID 16916930
- Paz, Arnon; Brownstein Zippora; Ber Yaara; Bialik Shani; David Eyal; Sagir Dorit; Ulitsky Igor; Elkon Ran; Kimchi Adi; Avraham Karen B; Shiloh Yosef; Shamir Ron (Jan 2011). "SPIKE: a database of highly curated human signaling pathways". Nucleic Acids Res. 39 (Database issue). England: D793-9. doi:10.1093/nar/gkq1167. PMC 3014840. PMID 21097778.
- Fogg, Christina (2022). "2022 ISCB Accomplishments by a Senior Scientist Award: Ron Shamir". Bioinformatics. 38 (Suppl 1): i1 – i2. doi:10.1093/bioinformatics/btac339. PMC 9236576. PMID 35758791. Retrieved 2023-06-04.

oup.com

academic.oup.com

Fogg, Christina (2022). "2022 ISCB Accomplishments by a Senior Scientist Award: Ron Shamir". Bioinformatics. 38 (Suppl 1): i1 – i2. doi:10.1093/bioinformatics/btac339. PMC 9236576. PMID 35758791. Retrieved 2023-06-04.

pais.co.il

Landau Prize Winners for 2010 Archived 2011-10-08 at the Wayback Machine (Hebrew). Accessed January 12, 2014

psu.edu

citeseerx.ist.psu.edu

Ben-Dor, A.; Shamir, R.; Yakhini, Z. (1999), "Clustering gene expression patterns", Journal of Computational Biology, 6 (3–4): 281–297, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
Sharan, R.; Maron-Katz, A.; Shamir, R. (2000), "CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis", Intelligent Systems in Molecular Biology, 19 (14): 307–316, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350.
- Tanay, A.; Sharan, R.; Shamir, R. (2000), "Discovering statistically significant biclusters in gene expression data", Bioinformatics, 18 (1): S136 – S144, doi:10.1093/bioinformatics/18.suppl_1.S136, PMID 12169541
- Sharan, R.; Maron-Katz, A.; Shamir, R. (2003), "CLICK and EXPANDER: a system for clustering and visualizing gene expression data", Bioinformatics, 19 (14): 1787–1799, CiteSeerX 10.1.1.126.8500, doi:10.1093/bioinformatics/btg232, PMID 14512350
- Golumbic, Martin Charles; Kaplan, Haim; Shamir, Ron (1995), "Graph Sandwich Problems", Journal of Algorithms, 19 (3): 449–473, CiteSeerX 10.1.1.12.8158, doi:10.1006/jagm.1995.1047
- Kaplan, Haim; Shamir, Ron (1996), "Pathwidth, Bandwidth, and Completion Problems to Proper Interval Graphs with Small Cliques", SIAM Journal on Computing, 25 (3): 540–561, CiteSeerX 10.1.1.34.9275, doi:10.1137/S0097539793258143
- Kaplan, Haim; Shamir, Ron; Tarjan, Robert E. (1999), "Tractability of Parameterized Completion Problems on Chordal, Strongly Chordal, and Proper Interval Graphs", SIAM Journal on Computing, 28 (5): 1906–1922, CiteSeerX 10.1.1.12.2803, doi:10.1137/S0097539796303044
- Hartuv, E.; Shamir, R. (2000), "A clustering algorithm based on graph connectivity", Information Processing Letters, 76 (4–6): 175–181, CiteSeerX 10.1.1.17.1450, doi:10.1016/S0020-0190(00)00142-3
- Ben-Dor, Amir; Shamir, Ron; Yakhini, Zohar (1999), "Clustering Gene Expression Patterns", Journal of Computational Biology, 6 (3–4): 281–97, CiteSeerX 10.1.1.34.5341, doi:10.1089/106652799318274, PMID 10582567
- Kaplan, H.; Shamir, R.; Tarjan, R.E. (1999), "A Faster and Simpler Algorithm for Sorting Signed Permutations by Reversals", SIAM Journal on Computing, 29 (3): 880–892, CiteSeerX 10.1.1.43.5245, doi:10.1137/s0097539798334207
- Sharan, Roded; Ideker, Trey; Kelley, Brian; Shamir, Ron; Karp, Richard M. (July 2005). "Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data". Journal of Computational Biology. 12 (6): 835–846. CiteSeerX 10.1.1.139.231. doi:10.1089/cmb.2005.12.835. ISSN 1066-5277. PMID 16108720.

recomb.org

RECOMB steering committee, including former member Ron Shamir. Accessed January 12, 2014
RECOMB award winners. Accessed January 12, 2014

semanticscholar.org

api.semanticscholar.org

Ulitsky, Igor; Maron-Katz, Adi; Shavit, Seagull; Sagir, Dorit; Linhart, Chaim; Elkon, Ran; Tanay, Amos; Sharan, Roded; Shiloh, Yosef; Shamir, Ron (2010), "Expander: From expression microarrays to networks and functions", Nature Protocols, 5 (2): 303–22, doi:10.1038/nprot.2009.230, PMID 20134430, S2CID 3504270

tau.ac.il

safrabio.cs.tau.ac.il

http://safrabio.cs.tau.ac.il/steering_committee.htm Members of the steering committee of the Edmond J. Safra Center for Bioinformatics

cs.tau.ac.il

The Raymond and Beverly Sackler Chair in Bioinformatics endowed chairs. Accessed January 12, 2014

web.archive.org

Anon (2017). "ISCB Fellows". iscb.org. International Society for Computational Biology. Archived from the original on 2017-03-20.
Landau Prize Winners for 2010 Archived 2011-10-08 at the Wayback Machine (Hebrew). Accessed January 12, 2014

worldcat.org

search.worldcat.org

Hochbaum, Dorit S.; Shamir, Ron (1991). "Strongly Polynomial Algorithms for the High Multiplicity Scheduling Problem". Operations Research. 39 (4): 648–653. doi:10.1287/opre.39.4.648. ISSN 0030-364X.
Sharan, Roded; Ideker, Trey; Kelley, Brian; Shamir, Ron; Karp, Richard M. (July 2005). "Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data". Journal of Computational Biology. 12 (6): 835–846. CiteSeerX 10.1.1.139.231. doi:10.1089/cmb.2005.12.835. ISSN 1066-5277. PMID 16108720.

zenodo.org

Ulitsky, Igor; Maron-Katz, Adi; Shavit, Seagull; Sagir, Dorit; Linhart, Chaim; Elkon, Ran; Tanay, Amos; Sharan, Roded; Shiloh, Yosef; Shamir, Ron (2010), "Expander: From expression microarrays to networks and functions", Nature Protocols, 5 (2): 303–22, doi:10.1038/nprot.2009.230, PMID 20134430, S2CID 3504270