Single-nucleotide polymorphism (English Wikipedia)

Carlson, Bruce (15 June 2008). "SNPs — A Shortcut to Personalized Medicine". Genetic Engineering & Biotechnology News. 28 (12). Mary Ann Liebert, Inc. Archived from the original on 26 December 2010. Retrieved 2008-07-06. (subtitle) Medical applications are where the market's growth is expected

genomicscomputbiol.org (Global: low place; English: low place)

"View of SNPViz - Visualization of SNPs in proteins". genomicscomputbiol.org. doi:10.18547/gcb.2018.vol4.iss1.e100048. Archived from the original on 2020-08-07. Retrieved 2018-10-20.

handle.net (Global: 102^nd place; English: 76^th place)

hdl.handle.net

Lander, E. S.; et al. (2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011.

harvard.edu (Global: 18^th place; English: 17^th place)

ui.adsabs.harvard.edu

Lander, E. S.; et al. (2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011.
Auton, Adam; et al. (2015). "A global reference for human genetic variation". Nature. 526 (7571): 68–74. Bibcode:2015Natur.526...68T. doi:10.1038/nature15393. PMC 4750478. PMID 26432245.
Lu YF, Mauger DM, Goldstein DB, Urban TJ, Weeks KM, Bradrick SS (November 2015). "IFNL3 mRNA structure is remodeled by a functional non-coding polymorphism associated with hepatitis C virus clearance". Scientific Reports. 5 16037. Bibcode:2015NatSR...516037L. doi:10.1038/srep16037. PMC 4631997. PMID 26531896.
Kimchi-Sarfaty C, Oh JM, Kim IW, Sauna ZE, Calcagno AM, Ambudkar SV, Gottesman MM (January 2007). "A "silent" polymorphism in the MDR1 gene changes substrate specificity". Science. 315 (5811): 525–8. Bibcode:2007Sci...315..525K. doi:10.1126/science.1135308. PMID 17185560. S2CID 15146955.
Auton A, Brooks LD, Durbin RM, Garrison EP, Kang HM, Korbel JO, Marchini JL, McCarthy S, McVean GA, Abecasis GR (October 2015). "A global reference for human genetic variation". Nature. 526 (7571): 68–74. Bibcode:2015Natur.526...68T. doi:10.1038/nature15393. PMC 4750478. PMID 26432245.
Zhu Z, Yuan D, Luo D, Lu X, Huang S (2015-07-24). "Enrichment of Minor Alleles of Common SNPs and Improved Risk Prediction for Parkinson's Disease". PLOS ONE. 10 (7) e0133421. Bibcode:2015PLoSO..1033421Z. doi:10.1371/journal.pone.0133421. PMC 4514478. PMID 26207627.
Ellegren, Hans (January 2014). "Genome sequencing and population genomics in non-model organisms". Trends in Ecology & Evolution. 29 (1): 51–63. Bibcode:2014TEcoE..29...51E. doi:10.1016/j.tree.2013.09.008. ISSN 0169-5347. PMID 24139972.
Dorant, Yann; Benestan, Laura; Rougemont, Quentin; Normandeau, Eric; Boyle, Brian; Rochette, Rémy; Bernatchez, Louis (2019). "Comparing Pool-seq, Rapture, and GBS genotyping for inferring weak population structure: The American lobster (Homarus americanus) as a case study". Ecology and Evolution. 9 (11): 6606–6623. Bibcode:2019EcoEv...9.6606D. doi:10.1002/ece3.5240. ISSN 2045-7758. PMC 6580275. PMID 31236247.
Vendrami, David L. J.; Telesca, Luca; Weigand, Hannah; Weiss, Martina; Fawcett, Katie; Lehman, Katrin; Clark, M. S.; Leese, Florian; McMinn, Carrie; Moore, Heather; Hoffman, Joseph I. (2017). "RAD sequencing resolves fine-scale population structure in a benthic invertebrate: implications for understanding phenotypic plasticity". Royal Society Open Science. 4 (2) 160548. Bibcode:2017RSOS....460548V. doi:10.1098/rsos.160548. PMC 5367306. PMID 28386419.
Sebastiani, Paola; Lazarus, Ross; Weiss, Scott T.; Kunkel, Louis M.; Kohane, Isaac S.; Ramoni, Marco F. (2003-08-19). "Minimal haplotype tagging". Proceedings of the National Academy of Sciences of the United States of America. 100 (17): 9900–9905. Bibcode:2003PNAS..100.9900S. doi:10.1073/pnas.1633613100. ISSN 0027-8424. PMC 187880. PMID 12900503.
Gabriel, Stacey B.; Schaffner, Stephen F.; Nguyen, Huy; Moore, Jamie M.; Roy, Jessica; Blumenstiel, Brendan; Higgins, John; DeFelice, Matthew; Lochner, Amy; Faggart, Maura; Liu-Cordero, Shau Neen; Rotimi, Charles; Adeyemo, Adebowale; Cooper, Richard; Ward, Ryk (2002-06-21). "The structure of haplotype blocks in the human genome". Science. 296 (5576): 2225–2229. Bibcode:2002Sci...296.2225G. doi:10.1126/science.1069424. ISSN 1095-9203. PMID 12029063.
Altshuler, David; Donnelly, Peter; The International HapMap Consortium (October 2005). "A haplotype map of the human genome". Nature. 437 (7063): 1299–1320. Bibcode:2005Natur.437.1299T. doi:10.1038/nature04226. ISSN 1476-4687. PMC 1880871. PMID 16255080.
Perzel Mandell, Kira A.; Eagles, Nicholas J.; Wilton, Richard; Price, Amanda J.; Semick, Stephen A.; Collado-Torres, Leonardo; Ulrich, William S.; Tao, Ran; Han, Shizhong; Szalay, Alexander S.; Hyde, Thomas M.; Kleinman, Joel E.; Weinberger, Daniel R.; Jaffe, Andrew E. (2021-09-02). "Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk". Nature Communications. 12 (1): 5251. Bibcode:2021NatCo..12.5251P. doi:10.1038/s41467-021-25517-3. ISSN 2041-1723. PMC 8413445. PMID 34475392.
Ammitzbøll CG, Kjær TR, Steffensen R, Stengaard-Pedersen K, Nielsen HJ, Thiel S, Bøgsted M, Jensenius JC (28 November 2012). "Non-synonymous polymorphisms in the FCN1 gene determine ligand-binding ability and serum levels of M-ficolin". PLOS ONE. 7 (11) e50585. Bibcode:2012PLoSO...750585A. doi:10.1371/journal.pone.0050585. PMC 3509001. PMID 23209787.
Sachidanandam R, Weissman D, Schmidt SC, Kakol JM, Stein LD, Marth G, Sherry S, Mullikin JC, Mortimore BJ, Willey DL, Hunt SE, Cole CG, Coggill PC, Rice CM, Ning Z, Rogers J, Bentley DR, Kwok PY, Mardis ER, Yeh RT, Schultz B, Cook L, Davenport R, Dante M, Fulton L, Hillier L, Waterston RH, McPherson JD, Gilman B, Schaffner S, Van Etten WJ, Reich D, Higgins J, Daly MJ, Blumenstiel B, Baldwin J, Stange-Thomann N, Zody MC, Linton L, Lander ES, Altshuler D (February 2001). "A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms". Nature. 409 (6822): 928–33. Bibcode:2001Natur.409..928S. doi:10.1038/35057149. PMID 11237013.
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hgvs.org (Global: low place; English: low place)

hgvs.org

J.T. Den Dunnen (2008-02-20). "Recommendations for the description of sequence variants". Human Genome Variation Society. Archived from the original on 2008-09-14. Retrieved 2008-09-05.

varnomen.hgvs.org

"Sequence Variant Nomenclature". varnomen.hgvs.org. Retrieved 2019-12-02.

lh3.github.io (Global: low place; English: low place)

Li, Heng (March 15, 2021). "SNP vs SNV". Heng Li's blog. Retrieved May 3, 2023.

medlineplus.gov (Global: 1,581^st place; English: 1,299^th place)

"What are single nucleotide polymorphisms (SNPs)?: MedlinePlus Genetics". medlineplus.gov. Retrieved 2023-03-22.

nature.com (Global: 234^th place; English: 397^th place)

"single-nucleotide polymorphism / SNP | Learn Science at Scitable". www.nature.com. Archived from the original on 2015-11-10. Retrieved 2015-11-13.
Uffelmann, Emil; Huang, Qin Qin; Munung, Nchangwi Syntia; de Vries, Jantina; Okada, Yukinori; Martin, Alicia R.; Martin, Hilary C.; Lappalainen, Tuuli; Posthuma, Danielle (2021-08-26). "Genome-wide association studies". Nature Reviews Methods Primers. 1 (1): 59. doi:10.1038/s43586-021-00056-9. ISSN 2662-8449.
Price, Alkes L.; Patterson, Nick J.; Plenge, Robert M.; Weinblatt, Michael E.; Shadick, Nancy A.; Reich, David (August 2006). "Principal components analysis corrects for stratification in genome-wide association studies". Nature Genetics. 38 (8): 904–909. doi:10.1038/ng1847. ISSN 1546-1718. PMID 16862161.

nih.gov (Global: 4^th place; English: 4^th place)

pubmed.ncbi.nlm.nih.gov

Sherry, S. T.; Ward, M.; Sirotkin, K. (1999). "dbSNP—Database for Single Nucleotide Polymorphisms and Other Classes of Minor Genetic Variation". Genome Research. 9 (8): 677–679. doi:10.1101/gr.9.8.677. PMID 10447503. S2CID 10775908.
Lander, E. S.; et al. (2001). "Initial sequencing and analysis of the human genome". Nature. 409 (6822): 860–921. Bibcode:2001Natur.409..860L. doi:10.1038/35057062. hdl:2027.42/62798. PMID 11237011.
Auton, Adam; et al. (2015). "A global reference for human genetic variation". Nature. 526 (7571): 68–74. Bibcode:2015Natur.526...68T. doi:10.1038/nature15393. PMC 4750478. PMID 26432245.
Monga, Isha; Qureshi, Abid; Thakur, Nishant; Gupta, Amit Kumar; Kumar, Manoj (September 2017). "ASPsiRNA: A Resource of ASP-siRNAs Having Therapeutic Potential for Human Genetic Disorders and Algorithm for Prediction of Their Inhibitory Efficacy". G3. 7 (9): 2931–2943. doi:10.1534/g3.117.044024. PMC 5592921. PMID 28696921.
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Lu YF, Mauger DM, Goldstein DB, Urban TJ, Weeks KM, Bradrick SS (November 2015). "IFNL3 mRNA structure is remodeled by a functional non-coding polymorphism associated with hepatitis C virus clearance". Scientific Reports. 5 16037. Bibcode:2015NatSR...516037L. doi:10.1038/srep16037. PMC 4631997. PMID 26531896.
Kimchi-Sarfaty C, Oh JM, Kim IW, Sauna ZE, Calcagno AM, Ambudkar SV, Gottesman MM (January 2007). "A "silent" polymorphism in the MDR1 gene changes substrate specificity". Science. 315 (5811): 525–8. Bibcode:2007Sci...315..525K. doi:10.1126/science.1135308. PMID 17185560. S2CID 15146955.
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Varela MA, Amos W (March 2010). "Heterogeneous distribution of SNPs in the human genome: microsatellites as predictors of nucleotide diversity and divergence". Genomics. 95 (3): 151–9. doi:10.1016/j.ygeno.2009.12.003. PMID 20026267.
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Zhu Z, Yuan D, Luo D, Lu X, Huang S (2015-07-24). "Enrichment of Minor Alleles of Common SNPs and Improved Risk Prediction for Parkinson's Disease". PLOS ONE. 10 (7) e0133421. Bibcode:2015PLoSO..1033421Z. doi:10.1371/journal.pone.0133421. PMC 4514478. PMID 26207627.
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Dorant, Yann; Benestan, Laura; Rougemont, Quentin; Normandeau, Eric; Boyle, Brian; Rochette, Rémy; Bernatchez, Louis (2019). "Comparing Pool-seq, Rapture, and GBS genotyping for inferring weak population structure: The American lobster (Homarus americanus) as a case study". Ecology and Evolution. 9 (11): 6606–6623. Bibcode:2019EcoEv...9.6606D. doi:10.1002/ece3.5240. ISSN 2045-7758. PMC 6580275. PMID 31236247.
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