Transposable element (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Transposable element" in English language version.

refsWebsite

Global rank English rank

50nih.gov

4^th place

34doi.org

2^nd place

11harvard.edu

18^th place

17^th place

10semanticscholar.org

11^th place

8^th place

3books.google.com

3^rd place

1nature.com

234^th place

397^th place

1genetics.org

low place

1mit.edu

415^th place

327^th place

1ucr.edu

1,553^rd place

1,008^th place

1genenames.org

low place

1worldcat.org

5^th place

books.google.com

McGrayne SB (1998). Nobel Prize Women in Science: Their Lives, Struggles, and Momentous Discoveries (2nd ed.). Carol Publishing. p. 165. ISBN 978-0-9702256-0-3.
Des Jardins J (2010). The Madame Curie Complex: The Hidden History of Women in Science. Feminist Press at CUNY. p. 246. ISBN 978-1-55861-655-4.
Fedoroff N, Botstein D, eds. (1 January 1992). The Dynamic Genome: Barbara McClintock's Ideas in the Century of Genetics. Cold Spring Harbor Laboratory Press. p. 2. ISBN 978-0-87969-422-7.

doi.org

McClintock B (June 1950). "The origin and behavior of mutable loci in maize". Proceedings of the National Academy of Sciences of the United States of America. 36 (6): 344–55. Bibcode:1950PNAS...36..344M. doi:10.1073/pnas.36.6.344. PMC 1063197. PMID 15430309.
McClintock B (November 1953). "Induction of Instability at Selected Loci in Maize". Genetics. 38 (6): 579–99. doi:10.1093/genetics/38.6.579. PMC 1209627. PMID 17247459.
Ravindran, S. (2012). "Proceedings of the National Academy of Sciences Dec 2012, 109 (50) 20198-20199; DOI: 10.1073/pnas.1219372109". Proceedings of the National Academy of Sciences of the United States of America. 109 (50): 20198–20199. doi:10.1073/pnas.1219372109. PMC 3528533. PMID 23236127.
Kapitonov VV, Jurka J (May 2008). "A universal classification of eukaryotic transposable elements implemented in Repbase". Nature Reviews. Genetics. 9 (5): 411–2, author reply 414. doi:10.1038/nrg2165-c1. PMID 18421312. S2CID 1275744.
Walter M (2016). Transposon regulation upon dynamic loss of DNA methylation (Thesis). Université Pierre et Marie Curie. doi:10.13140/rg.2.2.18747.21286.
Kazazian HH, Moran JV (May 1998). "The impact of L1 retrotransposons on the human genome". Nature Genetics. 19 (1): 19–24. doi:10.1038/ng0598-19. PMID 9590283. S2CID 33460203.
Boutanaev AM, Osbourn AE (July 2018). "Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots". Proceedings of the National Academy of Sciences of the United States of America. 115 (28): E6650 – E6658. Bibcode:2018PNAS..115E6650B. doi:10.1073/pnas.1721318115. PMC 6048515. PMID 29941591.
Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE (2002). "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective". Genome Biology. 3 (12): RESEARCH0084. doi:10.1186/gb-2002-3-12-research0084. PMC 151186. PMID 12537573.
Mustajoki S, Ahola H, Mustajoki P, Kauppinen R (June 1999). "Insertion of Alu element responsible for acute intermittent porphyria". Human Mutation. 13 (6): 431–8. doi:10.1002/(sici)1098-1004(1999)13:6<431::aid-humu2>3.0.co;2-y. PMID 10408772. S2CID 6218429.
Paquin CE, Williamson VM (October 1984). "Temperature effects on the rate of ty transposition". Science. 226 (4670): 53–5. Bibcode:1984Sci...226...53P. doi:10.1126/science.226.4670.53. PMID 17815421. S2CID 39145808.
Strand DJ, McDonald JF (June 1985). "Copia is transcriptionally responsive to environmental stress". Nucleic Acids Research. 13 (12): 4401–10. doi:10.1093/nar/13.12.4401. PMC 321795. PMID 2409535.
Chung WJ, Okamura K, Martin R, Lai EC (June 2008). "Endogenous RNA interference provides a somatic defense against Drosophila transposons". Current Biology. 18 (11): 795–802. Bibcode:2008CBio...18..795C. doi:10.1016/j.cub.2008.05.006. PMC 2812477. PMID 18501606.
Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H, Kakutani T (May 2001). "Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis". Nature. 411 (6834): 212–4. Bibcode:2001Natur.411..212M. doi:10.1038/35075612. PMID 11346800. S2CID 4429219.
Yang N, Kazazian HH (September 2006). "L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells". Nature Structural & Molecular Biology. 13 (9): 763–71. doi:10.1038/nsmb1141. PMID 16936727. S2CID 32601334.
Kidwell MG (1992). "Horizontal transfer of P elements and other short inverted repeat transposons". Genetica. 86 (1–3): 275–86. doi:10.1007/BF00133726. PMID 1334912. S2CID 33227644.
Ricci, Marco; Peona, Valentina; Guichard, Etienne; Taccioli, Cristian; Boattini, Alessio (31 May 2018). "Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals". Journal of Molecular Evolution. 86 (5): 303–310. Bibcode:2018JMolE..86..303R. doi:10.1007/s00239-018-9847-7. PMC 6028844. PMID 29855654.
Plasterk RH, Izsvák Z, Ivics Z (August 1999). "Resident aliens: the Tc1/mariner superfamily of transposable elements". Trends in Genetics. 15 (8): 326–32. doi:10.1016/S0168-9525(99)01777-1. PMID 10431195.
Ivics Z, Hackett PB, Plasterk RH, Izsvák Z (November 1997). "Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells". Cell. 91 (4): 501–10. doi:10.1016/S0092-8674(00)80436-5. PMID 9390559. S2CID 17908472.
Miskey C, Papp B, Mátés L, Sinzelle L, Keller H, Izsvák Z, Ivics Z (June 2007). "The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends". Molecular and Cellular Biology. 27 (12): 4589–600. doi:10.1128/MCB.02027-06. PMC 1900042. PMID 17403897.
Gil E, Bosch A, Lampe D, Lizcano JM, Perales JC, Danos O, Chillon M (11 September 2013). "Functional characterization of the human mariner transposon Hsmar2". PLOS ONE. 8 (9): e73227. Bibcode:2013PLoSO...873227G. doi:10.1371/journal.pone.0073227. PMC 3770610. PMID 24039890.
Ball, Hope C.; Ansari, Mohammad Y.; Ahmad, Nashrah; Novak, Kimberly; Haqqi, Tariq M. (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi:10.1080/03008207.2020.1828380. ISSN 1607-8438. PMC 8404968. PMID 33043724.
Jin Y, Zhang W, Li Q (June 2009). "Origins and evolution of ADAR-mediated RNA editing". IUBMB Life. 61 (6): 572–578. doi:10.1002/iub.207. PMID 19472181.
Moran JV, DeBerardinis RJ, Kazazian HH (March 1999). "Exon shuffling by L1 retrotransposition". Science. 283 (5407): 1530–4. Bibcode:1999Sci...283.1530M. doi:10.1126/science.283.5407.1530. PMID 10066175.
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR (September 2004). "Pack-MULE transposable elements mediate gene evolution in plants". Nature. 431 (7008): 569–573. Bibcode:2004Natur.431..569J. doi:10.1038/nature02953. PMID 15457261. S2CID 4363679.
Catoni M, Jonesman T, Cerruti E, Paszkowski J (February 2019). "Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling". Nucleic Acids Research. 47 (3): 1311–1320. doi:10.1093/nar/gky1196. PMC 6379663. PMID 30476196.
Zhou W, Liang G, Molloy PL, Jones PA (August 2020). "DNA methylation enables transposable element-driven genome expansion". Proceedings of the National Academy of Sciences of the United States of America. 117 (32): 19359–19366. Bibcode:2020PNAS..11719359Z. doi:10.1073/pnas.1921719117. PMC 7431005. PMID 32719115.
Saha S, Bridges S, Magbanua ZV, Peterson DG (2008). "Computational Approaches and Tools Used in Identification of Dispersed Repetitive DNA Sequences". Tropical Plant Biol. 1 (1): 85–96. Bibcode:2008TroPB...1...85S. doi:10.1007/s12042-007-9007-5. S2CID 26272439.
Makałowski W, Pande A, Gotea V, Makałowska I (2012). "Transposable elements and their identification". Evolutionary Genomics. Methods in Molecular Biology. Vol. 855. pp. 337–59. doi:10.1007/978-1-61779-582-4_12. ISBN 978-1-61779-581-7. PMID 22407715.
Saha S, Bridges S, Magbanua ZV, Peterson DG (April 2008). "Empirical comparison of ab initio repeat finding programs". Nucleic Acids Research. 36 (7): 2284–94. doi:10.1093/nar/gkn064. PMC 2367713. PMID 18287116.
Mariño-Ramírez L, Lewis KC, Landsman D, Jordan IK (2005). "Transposable elements donate lineage-specific regulatory sequences to host genomes". Cytogenetic and Genome Research. 110 (1–4): 333–41. doi:10.1159/000084965. PMC 1803082. PMID 16093685.
González J, Lenkov K, Lipatov M, Macpherson JM, Petrov DA (October 2008). "High rate of recent transposable element-induced adaptation in Drosophila melanogaster". PLOS Biology. 6 (10): e251. doi:10.1371/journal.pbio.0060251. PMC 2570423. PMID 18942889.
González J, Macpherson JM, Petrov DA (September 2009). "A recent adaptive transposable element insertion near highly conserved developmental loci in Drosophila melanogaster". Molecular Biology and Evolution. 26 (9): 1949–61. doi:10.1093/molbev/msp107. PMC 2734154. PMID 19458110.
Tempel S, Rousseau C, Tahi F, Nicolas J (September 2010). "ModuleOrganizer: detecting modules in families of transposable elements". BMC Bioinformatics. 11: 474. doi:10.1186/1471-2105-11-474. PMC 2955051. PMID 20860790.
Sun W, Shen YH, Han MJ, Cao YF, Zhang Z (December 2014). "An adaptive transposable element insertion in the regulatory region of the EO gene in the domesticated silkworm, Bombyx mori". Molecular Biology and Evolution. 31 (12): 3302–13. doi:10.1093/molbev/msu261. PMID 25213334.

genenames.org

"Gene group: Transposable element derived genes". HUGO Gene Nomenclature Committee. Retrieved 4 March 2019.

genetics.org

McClintock B (November 1953). "Induction of Instability at Selected Loci in Maize". Genetics. 38 (6): 579–99. doi:10.1093/genetics/38.6.579. PMC 1209627. PMID 17247459.

harvard.edu

ui.adsabs.harvard.edu

McClintock B (June 1950). "The origin and behavior of mutable loci in maize". Proceedings of the National Academy of Sciences of the United States of America. 36 (6): 344–55. Bibcode:1950PNAS...36..344M. doi:10.1073/pnas.36.6.344. PMC 1063197. PMID 15430309.
Boutanaev AM, Osbourn AE (July 2018). "Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots". Proceedings of the National Academy of Sciences of the United States of America. 115 (28): E6650 – E6658. Bibcode:2018PNAS..115E6650B. doi:10.1073/pnas.1721318115. PMC 6048515. PMID 29941591.
Paquin CE, Williamson VM (October 1984). "Temperature effects on the rate of ty transposition". Science. 226 (4670): 53–5. Bibcode:1984Sci...226...53P. doi:10.1126/science.226.4670.53. PMID 17815421. S2CID 39145808.
Chung WJ, Okamura K, Martin R, Lai EC (June 2008). "Endogenous RNA interference provides a somatic defense against Drosophila transposons". Current Biology. 18 (11): 795–802. Bibcode:2008CBio...18..795C. doi:10.1016/j.cub.2008.05.006. PMC 2812477. PMID 18501606.
Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H, Kakutani T (May 2001). "Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis". Nature. 411 (6834): 212–4. Bibcode:2001Natur.411..212M. doi:10.1038/35075612. PMID 11346800. S2CID 4429219.
Ricci, Marco; Peona, Valentina; Guichard, Etienne; Taccioli, Cristian; Boattini, Alessio (31 May 2018). "Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals". Journal of Molecular Evolution. 86 (5): 303–310. Bibcode:2018JMolE..86..303R. doi:10.1007/s00239-018-9847-7. PMC 6028844. PMID 29855654.
Gil E, Bosch A, Lampe D, Lizcano JM, Perales JC, Danos O, Chillon M (11 September 2013). "Functional characterization of the human mariner transposon Hsmar2". PLOS ONE. 8 (9): e73227. Bibcode:2013PLoSO...873227G. doi:10.1371/journal.pone.0073227. PMC 3770610. PMID 24039890.
Moran JV, DeBerardinis RJ, Kazazian HH (March 1999). "Exon shuffling by L1 retrotransposition". Science. 283 (5407): 1530–4. Bibcode:1999Sci...283.1530M. doi:10.1126/science.283.5407.1530. PMID 10066175.
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR (September 2004). "Pack-MULE transposable elements mediate gene evolution in plants". Nature. 431 (7008): 569–573. Bibcode:2004Natur.431..569J. doi:10.1038/nature02953. PMID 15457261. S2CID 4363679.
Zhou W, Liang G, Molloy PL, Jones PA (August 2020). "DNA methylation enables transposable element-driven genome expansion". Proceedings of the National Academy of Sciences of the United States of America. 117 (32): 19359–19366. Bibcode:2020PNAS..11719359Z. doi:10.1073/pnas.1921719117. PMC 7431005. PMID 32719115.
Saha S, Bridges S, Magbanua ZV, Peterson DG (2008). "Computational Approaches and Tools Used in Identification of Dispersed Repetitive DNA Sequences". Tropical Plant Biol. 1 (1): 85–96. Bibcode:2008TroPB...1...85S. doi:10.1007/s12042-007-9007-5. S2CID 26272439.

mit.edu

wi.mit.edu

A not-so-selfish “genetic parasite” helps to preserve fertility

nature.com

Pray LA (2008). "Transposons: The jumping genes". Nature Education. 1 (1): 204.

nih.gov

pubmed.ncbi.nlm.nih.gov

McClintock B (June 1950). "The origin and behavior of mutable loci in maize". Proceedings of the National Academy of Sciences of the United States of America. 36 (6): 344–55. Bibcode:1950PNAS...36..344M. doi:10.1073/pnas.36.6.344. PMC 1063197. PMID 15430309.
McClintock B (November 1953). "Induction of Instability at Selected Loci in Maize". Genetics. 38 (6): 579–99. doi:10.1093/genetics/38.6.579. PMC 1209627. PMID 17247459.
Ravindran, S. (2012). "Proceedings of the National Academy of Sciences Dec 2012, 109 (50) 20198-20199; DOI: 10.1073/pnas.1219372109". Proceedings of the National Academy of Sciences of the United States of America. 109 (50): 20198–20199. doi:10.1073/pnas.1219372109. PMC 3528533. PMID 23236127.
Kapitonov VV, Jurka J (May 2008). "A universal classification of eukaryotic transposable elements implemented in Repbase". Nature Reviews. Genetics. 9 (5): 411–2, author reply 414. doi:10.1038/nrg2165-c1. PMID 18421312. S2CID 1275744.
Kazazian HH, Moran JV (May 1998). "The impact of L1 retrotransposons on the human genome". Nature Genetics. 19 (1): 19–24. doi:10.1038/ng0598-19. PMID 9590283. S2CID 33460203.
Boutanaev AM, Osbourn AE (July 2018). "Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots". Proceedings of the National Academy of Sciences of the United States of America. 115 (28): E6650 – E6658. Bibcode:2018PNAS..115E6650B. doi:10.1073/pnas.1721318115. PMC 6048515. PMID 29941591.
Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE (2002). "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective". Genome Biology. 3 (12): RESEARCH0084. doi:10.1186/gb-2002-3-12-research0084. PMC 151186. PMID 12537573.
Mustajoki S, Ahola H, Mustajoki P, Kauppinen R (June 1999). "Insertion of Alu element responsible for acute intermittent porphyria". Human Mutation. 13 (6): 431–8. doi:10.1002/(sici)1098-1004(1999)13:6<431::aid-humu2>3.0.co;2-y. PMID 10408772. S2CID 6218429.
Paquin CE, Williamson VM (October 1984). "Temperature effects on the rate of ty transposition". Science. 226 (4670): 53–5. Bibcode:1984Sci...226...53P. doi:10.1126/science.226.4670.53. PMID 17815421. S2CID 39145808.
Strand DJ, McDonald JF (June 1985). "Copia is transcriptionally responsive to environmental stress". Nucleic Acids Research. 13 (12): 4401–10. doi:10.1093/nar/13.12.4401. PMC 321795. PMID 2409535.
Chung WJ, Okamura K, Martin R, Lai EC (June 2008). "Endogenous RNA interference provides a somatic defense against Drosophila transposons". Current Biology. 18 (11): 795–802. Bibcode:2008CBio...18..795C. doi:10.1016/j.cub.2008.05.006. PMC 2812477. PMID 18501606.
Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H, Kakutani T (May 2001). "Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis". Nature. 411 (6834): 212–4. Bibcode:2001Natur.411..212M. doi:10.1038/35075612. PMID 11346800. S2CID 4429219.
Yang N, Kazazian HH (September 2006). "L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells". Nature Structural & Molecular Biology. 13 (9): 763–71. doi:10.1038/nsmb1141. PMID 16936727. S2CID 32601334.
Kidwell MG (1992). "Horizontal transfer of P elements and other short inverted repeat transposons". Genetica. 86 (1–3): 275–86. doi:10.1007/BF00133726. PMID 1334912. S2CID 33227644.
Ricci, Marco; Peona, Valentina; Guichard, Etienne; Taccioli, Cristian; Boattini, Alessio (31 May 2018). "Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals". Journal of Molecular Evolution. 86 (5): 303–310. Bibcode:2018JMolE..86..303R. doi:10.1007/s00239-018-9847-7. PMC 6028844. PMID 29855654.
Plasterk RH, Izsvák Z, Ivics Z (August 1999). "Resident aliens: the Tc1/mariner superfamily of transposable elements". Trends in Genetics. 15 (8): 326–32. doi:10.1016/S0168-9525(99)01777-1. PMID 10431195.
Ivics Z, Hackett PB, Plasterk RH, Izsvák Z (November 1997). "Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells". Cell. 91 (4): 501–10. doi:10.1016/S0092-8674(00)80436-5. PMID 9390559. S2CID 17908472.
Miskey C, Papp B, Mátés L, Sinzelle L, Keller H, Izsvák Z, Ivics Z (June 2007). "The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends". Molecular and Cellular Biology. 27 (12): 4589–600. doi:10.1128/MCB.02027-06. PMC 1900042. PMID 17403897.
Gil E, Bosch A, Lampe D, Lizcano JM, Perales JC, Danos O, Chillon M (11 September 2013). "Functional characterization of the human mariner transposon Hsmar2". PLOS ONE. 8 (9): e73227. Bibcode:2013PLoSO...873227G. doi:10.1371/journal.pone.0073227. PMC 3770610. PMID 24039890.
Ball, Hope C.; Ansari, Mohammad Y.; Ahmad, Nashrah; Novak, Kimberly; Haqqi, Tariq M. (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi:10.1080/03008207.2020.1828380. ISSN 1607-8438. PMC 8404968. PMID 33043724.
Jin Y, Zhang W, Li Q (June 2009). "Origins and evolution of ADAR-mediated RNA editing". IUBMB Life. 61 (6): 572–578. doi:10.1002/iub.207. PMID 19472181.
Moran JV, DeBerardinis RJ, Kazazian HH (March 1999). "Exon shuffling by L1 retrotransposition". Science. 283 (5407): 1530–4. Bibcode:1999Sci...283.1530M. doi:10.1126/science.283.5407.1530. PMID 10066175.
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR (September 2004). "Pack-MULE transposable elements mediate gene evolution in plants". Nature. 431 (7008): 569–573. Bibcode:2004Natur.431..569J. doi:10.1038/nature02953. PMID 15457261. S2CID 4363679.
Catoni M, Jonesman T, Cerruti E, Paszkowski J (February 2019). "Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling". Nucleic Acids Research. 47 (3): 1311–1320. doi:10.1093/nar/gky1196. PMC 6379663. PMID 30476196.
Zhou W, Liang G, Molloy PL, Jones PA (August 2020). "DNA methylation enables transposable element-driven genome expansion". Proceedings of the National Academy of Sciences of the United States of America. 117 (32): 19359–19366. Bibcode:2020PNAS..11719359Z. doi:10.1073/pnas.1921719117. PMC 7431005. PMID 32719115.
Makałowski W, Pande A, Gotea V, Makałowska I (2012). "Transposable elements and their identification". Evolutionary Genomics. Methods in Molecular Biology. Vol. 855. pp. 337–59. doi:10.1007/978-1-61779-582-4_12. ISBN 978-1-61779-581-7. PMID 22407715.
Saha S, Bridges S, Magbanua ZV, Peterson DG (April 2008). "Empirical comparison of ab initio repeat finding programs". Nucleic Acids Research. 36 (7): 2284–94. doi:10.1093/nar/gkn064. PMC 2367713. PMID 18287116.
Mariño-Ramírez L, Lewis KC, Landsman D, Jordan IK (2005). "Transposable elements donate lineage-specific regulatory sequences to host genomes". Cytogenetic and Genome Research. 110 (1–4): 333–41. doi:10.1159/000084965. PMC 1803082. PMID 16093685.
González J, Lenkov K, Lipatov M, Macpherson JM, Petrov DA (October 2008). "High rate of recent transposable element-induced adaptation in Drosophila melanogaster". PLOS Biology. 6 (10): e251. doi:10.1371/journal.pbio.0060251. PMC 2570423. PMID 18942889.
González J, Macpherson JM, Petrov DA (September 2009). "A recent adaptive transposable element insertion near highly conserved developmental loci in Drosophila melanogaster". Molecular Biology and Evolution. 26 (9): 1949–61. doi:10.1093/molbev/msp107. PMC 2734154. PMID 19458110.
Tempel S, Rousseau C, Tahi F, Nicolas J (September 2010). "ModuleOrganizer: detecting modules in families of transposable elements". BMC Bioinformatics. 11: 474. doi:10.1186/1471-2105-11-474. PMC 2955051. PMID 20860790.
Sun W, Shen YH, Han MJ, Cao YF, Zhang Z (December 2014). "An adaptive transposable element insertion in the regulatory region of the EO gene in the domesticated silkworm, Bombyx mori". Molecular Biology and Evolution. 31 (12): 3302–13. doi:10.1093/molbev/msu261. PMID 25213334.

ncbi.nlm.nih.gov

McClintock B (June 1950). "The origin and behavior of mutable loci in maize". Proceedings of the National Academy of Sciences of the United States of America. 36 (6): 344–55. Bibcode:1950PNAS...36..344M. doi:10.1073/pnas.36.6.344. PMC 1063197. PMID 15430309.
McClintock B (November 1953). "Induction of Instability at Selected Loci in Maize". Genetics. 38 (6): 579–99. doi:10.1093/genetics/38.6.579. PMC 1209627. PMID 17247459.
Ravindran, S. (2012). "Proceedings of the National Academy of Sciences Dec 2012, 109 (50) 20198-20199; DOI: 10.1073/pnas.1219372109". Proceedings of the National Academy of Sciences of the United States of America. 109 (50): 20198–20199. doi:10.1073/pnas.1219372109. PMC 3528533. PMID 23236127.
Boutanaev AM, Osbourn AE (July 2018). "Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots". Proceedings of the National Academy of Sciences of the United States of America. 115 (28): E6650 – E6658. Bibcode:2018PNAS..115E6650B. doi:10.1073/pnas.1721318115. PMC 6048515. PMID 29941591.
Kaminker JS, Bergman CM, Kronmiller B, Carlson J, Svirskas R, Patel S, Frise E, Wheeler DA, Lewis SE, Rubin GM, Ashburner M, Celniker SE (2002). "The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective". Genome Biology. 3 (12): RESEARCH0084. doi:10.1186/gb-2002-3-12-research0084. PMC 151186. PMID 12537573.
Strand DJ, McDonald JF (June 1985). "Copia is transcriptionally responsive to environmental stress". Nucleic Acids Research. 13 (12): 4401–10. doi:10.1093/nar/13.12.4401. PMC 321795. PMID 2409535.
Chung WJ, Okamura K, Martin R, Lai EC (June 2008). "Endogenous RNA interference provides a somatic defense against Drosophila transposons". Current Biology. 18 (11): 795–802. Bibcode:2008CBio...18..795C. doi:10.1016/j.cub.2008.05.006. PMC 2812477. PMID 18501606.
Ricci, Marco; Peona, Valentina; Guichard, Etienne; Taccioli, Cristian; Boattini, Alessio (31 May 2018). "Transposable Elements Activity is Positively Related to Rate of Speciation in Mammals". Journal of Molecular Evolution. 86 (5): 303–310. Bibcode:2018JMolE..86..303R. doi:10.1007/s00239-018-9847-7. PMC 6028844. PMID 29855654.
Miskey C, Papp B, Mátés L, Sinzelle L, Keller H, Izsvák Z, Ivics Z (June 2007). "The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends". Molecular and Cellular Biology. 27 (12): 4589–600. doi:10.1128/MCB.02027-06. PMC 1900042. PMID 17403897.
Gil E, Bosch A, Lampe D, Lizcano JM, Perales JC, Danos O, Chillon M (11 September 2013). "Functional characterization of the human mariner transposon Hsmar2". PLOS ONE. 8 (9): e73227. Bibcode:2013PLoSO...873227G. doi:10.1371/journal.pone.0073227. PMC 3770610. PMID 24039890.
Ball, Hope C.; Ansari, Mohammad Y.; Ahmad, Nashrah; Novak, Kimberly; Haqqi, Tariq M. (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi:10.1080/03008207.2020.1828380. ISSN 1607-8438. PMC 8404968. PMID 33043724.
Catoni M, Jonesman T, Cerruti E, Paszkowski J (February 2019). "Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling". Nucleic Acids Research. 47 (3): 1311–1320. doi:10.1093/nar/gky1196. PMC 6379663. PMID 30476196.
Zhou W, Liang G, Molloy PL, Jones PA (August 2020). "DNA methylation enables transposable element-driven genome expansion". Proceedings of the National Academy of Sciences of the United States of America. 117 (32): 19359–19366. Bibcode:2020PNAS..11719359Z. doi:10.1073/pnas.1921719117. PMC 7431005. PMID 32719115.
Saha S, Bridges S, Magbanua ZV, Peterson DG (April 2008). "Empirical comparison of ab initio repeat finding programs". Nucleic Acids Research. 36 (7): 2284–94. doi:10.1093/nar/gkn064. PMC 2367713. PMID 18287116.
Mariño-Ramírez L, Lewis KC, Landsman D, Jordan IK (2005). "Transposable elements donate lineage-specific regulatory sequences to host genomes". Cytogenetic and Genome Research. 110 (1–4): 333–41. doi:10.1159/000084965. PMC 1803082. PMID 16093685.
González J, Lenkov K, Lipatov M, Macpherson JM, Petrov DA (October 2008). "High rate of recent transposable element-induced adaptation in Drosophila melanogaster". PLOS Biology. 6 (10): e251. doi:10.1371/journal.pbio.0060251. PMC 2570423. PMID 18942889.
González J, Macpherson JM, Petrov DA (September 2009). "A recent adaptive transposable element insertion near highly conserved developmental loci in Drosophila melanogaster". Molecular Biology and Evolution. 26 (9): 1949–61. doi:10.1093/molbev/msp107. PMC 2734154. PMID 19458110.
Tempel S, Rousseau C, Tahi F, Nicolas J (September 2010). "ModuleOrganizer: detecting modules in families of transposable elements". BMC Bioinformatics. 11: 474. doi:10.1186/1471-2105-11-474. PMC 2955051. PMID 20860790.

semanticscholar.org

api.semanticscholar.org

Kapitonov VV, Jurka J (May 2008). "A universal classification of eukaryotic transposable elements implemented in Repbase". Nature Reviews. Genetics. 9 (5): 411–2, author reply 414. doi:10.1038/nrg2165-c1. PMID 18421312. S2CID 1275744.
Kazazian HH, Moran JV (May 1998). "The impact of L1 retrotransposons on the human genome". Nature Genetics. 19 (1): 19–24. doi:10.1038/ng0598-19. PMID 9590283. S2CID 33460203.
Mustajoki S, Ahola H, Mustajoki P, Kauppinen R (June 1999). "Insertion of Alu element responsible for acute intermittent porphyria". Human Mutation. 13 (6): 431–8. doi:10.1002/(sici)1098-1004(1999)13:6<431::aid-humu2>3.0.co;2-y. PMID 10408772. S2CID 6218429.
Paquin CE, Williamson VM (October 1984). "Temperature effects on the rate of ty transposition". Science. 226 (4670): 53–5. Bibcode:1984Sci...226...53P. doi:10.1126/science.226.4670.53. PMID 17815421. S2CID 39145808.
Miura A, Yonebayashi S, Watanabe K, Toyama T, Shimada H, Kakutani T (May 2001). "Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis". Nature. 411 (6834): 212–4. Bibcode:2001Natur.411..212M. doi:10.1038/35075612. PMID 11346800. S2CID 4429219.
Yang N, Kazazian HH (September 2006). "L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells". Nature Structural & Molecular Biology. 13 (9): 763–71. doi:10.1038/nsmb1141. PMID 16936727. S2CID 32601334.
Kidwell MG (1992). "Horizontal transfer of P elements and other short inverted repeat transposons". Genetica. 86 (1–3): 275–86. doi:10.1007/BF00133726. PMID 1334912. S2CID 33227644.
Ivics Z, Hackett PB, Plasterk RH, Izsvák Z (November 1997). "Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells". Cell. 91 (4): 501–10. doi:10.1016/S0092-8674(00)80436-5. PMID 9390559. S2CID 17908472.
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR (September 2004). "Pack-MULE transposable elements mediate gene evolution in plants". Nature. 431 (7008): 569–573. Bibcode:2004Natur.431..569J. doi:10.1038/nature02953. PMID 15457261. S2CID 4363679.
Saha S, Bridges S, Magbanua ZV, Peterson DG (2008). "Computational Approaches and Tools Used in Identification of Dispersed Repetitive DNA Sequences". Tropical Plant Biol. 1 (1): 85–96. Bibcode:2008TroPB...1...85S. doi:10.1007/s12042-007-9007-5. S2CID 26272439.

ucr.edu

math.ucr.edu

Baez J (2005). "Subcellular Life Forms" (PDF).

worldcat.org

search.worldcat.org

Ball, Hope C.; Ansari, Mohammad Y.; Ahmad, Nashrah; Novak, Kimberly; Haqqi, Tariq M. (November 2021). "A retrotransposon gag-like-3 gene RTL3 and SOX-9 co-regulate the expression of COL2A1 in chondrocytes". Connective Tissue Research. 62 (6): 615–628. doi:10.1080/03008207.2020.1828380. ISSN 1607-8438. PMC 8404968. PMID 33043724.