Zetaproteobacteria (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Zetaproteobacteria" in English language version.

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85nih.gov

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Pischedda, L.; Militon, C. C.; Gilbert, F.; Cuny, P. (2011). "Characterization of specificity of bacterial community structure within the burrow environment of the marine polychaete Hediste (Nereis) diversicolor". Research in Microbiology. 162 (10): 1033–42. doi:10.1016/j.resmic.2011.07.008. PMID 21946148. S2CID 11103232.

awi.de

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Schauer, R.; Røy, H.; Augustin, N.; Gennerich, H. H.; Peters, M.; Wenzhoefer, F.; Amann, R.; Meyerdierks, A. (2011). "Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field" (PDF). Environmental Microbiology. 13 (10): 2633–2648. Bibcode:2011EnvMi..13.2633S. doi:10.1111/j.1462-2920.2011.02530.x. PMID 21895907.

doi.org

Emerson, D.; Rentz, J. A.; Lilburn, T. G.; Davis, R. E.; Aldrich, H.; Chan, C.; Moyer, C. L. (2007). Reysenbach, Anna-Louise (ed.). "A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities". PLOS ONE. 2 (8): e667. Bibcode:2007PLoSO...2..667E. doi:10.1371/journal.pone.0000667. PMC 1930151. PMID 17668050.
mariprofundus in LPSN; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi:10.1099/ijsem.0.004332.
Emerson, D.; Moyer, C. L. (2002). "Neutrophilic Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe oxide deposition". Applied and Environmental Microbiology. 68 (6): 3085–3093. Bibcode:2002ApEnM..68.3085E. doi:10.1128/AEM.68.6.3085-3093.2002. PMC 123976. PMID 12039770.
McAllister, S. M.; Davis, R. E.; McBeth, J. M.; Tebo, B. M.; Emerson, D.; Moyer, C. L. (2011). "Biodiversity and Emerging Biogeography of the Neutrophilic Iron-Oxidizing Zetaproteobacteria". Applied and Environmental Microbiology. 77 (15): 5445–5457. Bibcode:2011ApEnM..77.5445M. doi:10.1128/AEM.00533-11. PMC 3147450. PMID 21666021.
Schauer, R.; Røy, H.; Augustin, N.; Gennerich, H. H.; Peters, M.; Wenzhoefer, F.; Amann, R.; Meyerdierks, A. (2011). "Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field" (PDF). Environmental Microbiology. 13 (10): 2633–2648. Bibcode:2011EnvMi..13.2633S. doi:10.1111/j.1462-2920.2011.02530.x. PMID 21895907.
Hodges, T. W.; Olson, J. B. (2008). "Molecular Comparison of Bacterial Communities within Iron-Containing Flocculent Mats Associated with Submarine Volcanoes along the Kermadec Arc". Applied and Environmental Microbiology. 75 (6): 1650–1657. doi:10.1128/AEM.01835-08. PMC 2655482. PMID 19114513.
Davis, R. E.; Stakes, D. S.; Wheat, C. G.; Moyer, C. L. (2009). "Bacterial Variability within an Iron-Silica-Manganese-rich Hydrothermal Mound Located Off-axis at the Cleft Segment, Juan de Fuca Ridge". Geomicrobiology Journal. 26 (8): 570–580. Bibcode:2009GmbJ...26..570D. doi:10.1080/01490450902889080. S2CID 53621745.
Forget, N. L.; Murdock, S. A.; Juniper, S. K. (2010). "Bacterial diversity in Fe-rich hydrothermal sediments at two South Tonga Arc submarine volcanoes". Geobiology. 8 (5): 417–432. Bibcode:2010Gbio....8..417F. doi:10.1111/j.1472-4669.2010.00247.x. PMID 20533949. S2CID 807482.
Handley, K. M.; Boothman, C.; Mills, R. A.; Pancost, R. D.; Lloyd, J. R. (2010). "Functional diversity of bacteria in a ferruginous hydrothermal sediment". The ISME Journal. 4 (9): 1193–1205. Bibcode:2010ISMEJ...4.1193H. doi:10.1038/ismej.2010.38. PMID 20410934.
Kato, S.; Yanagawa, K.; Sunamura, M.; Takano, Y.; Ishibashi, J. I.; Kakegawa, T.; Utsumi, M.; Yamanaka, T.; Toki, T.; Noguchi, T.; Kobayashi, K.; Moroi, A.; Kimura, H.; Kawarabayasi, Y.; Marumo, K.; Urabe, T.; Yamagishi, A. (2009). "Abundance of Zetaproteobacteria within crustal fluids in back-arc hydrothermal fields of the Southern Mariana Trough". Environmental Microbiology. 11 (12): 3210–3222. Bibcode:2009EnvMi..11.3210K. doi:10.1111/j.1462-2920.2009.02031.x. PMID 19691504.
McBeth, J. M.; Little, B. J.; Ray, R. I.; Farrar, K. M.; Emerson, D. (2010). "Neutrophilic Iron-Oxidizing "Zetaproteobacteria" and Mild Steel Corrosion in Nearshore Marine Environments". Applied and Environmental Microbiology. 77 (4): 1405–1412. doi:10.1128/AEM.02095-10. PMC 3067224. PMID 21131509.
McBeth, J. M.; Fleming, E. J.; Emerson, D. (2013). "The transition from freshwater to marine iron-oxidizing bacterial lineages along a salinity gradient on the Sheepscot River, Maine, USA". Environmental Microbiology Reports. 5 (3): 453–63. Bibcode:2013EnvMR...5..453M. doi:10.1111/1758-2229.12033. PMID 23754725.
McAllister, S. M.; Barnett, J. M.; Heiss, J. W.; Findlay, A. J.; MacDonald, D. J.; Dow, C. L.; Luther, G. W.; Michael, H. A.; Chan, C. S. (2015). "Dynamic hydrologic and biogeochemical processes drive microbially enhanced iron and sulfur cycling within the intertidal mixing zone of a beach aquifer". Limnology and Oceanography. 60 (1): 329–345. Bibcode:2015LimOc..60..329M. doi:10.1002/lno.10029.
Dang, H.; Chen, R.; Wang, L.; Shao, S.; Dai, L.; Ye, Y.; Guo, L.; Huang, G.; Klotz, M. G. (2011). "Molecular characterization of putative biocorroding microbiota with a novel niche detection of Epsilon- and Zetaproteobacteria in Pacific Ocean coastal seawaters". Environmental Microbiology. 13 (11): 3059–3074. Bibcode:2011EnvMi..13.3059D. doi:10.1111/j.1462-2920.2011.02583.x. PMID 21951343.
Lee, J. S.; McBeth, J. M.; Ray, R. I.; Little, B. J.; Emerson, D. (2013). "Iron cycling at corroding carbon steel surfaces". Biofouling. 29 (10): 1243–1252. Bibcode:2013Biofo..29.1243L. doi:10.1080/08927014.2013.836184. PMC 3827670. PMID 24093730.
Moyer, C. L.; Dobbs, F. C.; Karl, D. M. (1995). "Phylogenetic diversity of the bacterial community from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii". Applied and Environmental Microbiology. 61 (4): 1555–1562. Bibcode:1995ApEnM..61.1555M. doi:10.1128/AEM.61.4.1555-1562.1995. PMC 167411. PMID 7538279.
Emerson, D.; Merrill Floyd, M. (2005). "Enrichment and Isolation of Iron-Oxidizing Bacteria at Neutral pH". Environmental Microbiology. Methods in Enzymology. Vol. 397. pp. 112–23. doi:10.1016/S0076-6879(05)97006-7. ISBN 9780121828028. PMID 16260287.
Summers, Z. M.; Gralnick, J. A.; Bond, D. R. (2013). "Cultivation of an Obligate Fe(II)-Oxidizing Lithoautotrophic Bacterium Using Electrodes". mBio. 4 (1): e00420–e00412. doi:10.1128/mBio.00420-12. PMC 3560526. PMID 23362318.
Barco, R. A.; Edwards, K. J. (2014). "Interactions of proteins with biogenic iron oxyhydroxides and a new culturing technique to increase biomass yields of neutrophilic, iron-oxidizing bacteria". Frontiers in Microbiology. 5: 259. doi:10.3389/fmicb.2014.00259. PMC 4038746. PMID 24910632.
Emerson, D.; Fleming, E. J.; McBeth, J. M. (2010). "Iron-Oxidizing Bacteria: An Environmental and Genomic Perspective". Annual Review of Microbiology. 64: 561–583. doi:10.1146/annurev.micro.112408.134208. PMID 20565252.
Chan, C. S.; Fakra, S. C.; Emerson, D.; Fleming, E. J.; Edwards, K. J. (2010). "Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: Implications for biosignature formation". The ISME Journal. 5 (4): 717–727. doi:10.1038/ismej.2010.173. PMC 3105749. PMID 21107443.
Comolli, L. R.; Luef, B.; Chan, C. S. (2011). "High-resolution 2D and 3D cryo-TEM reveals structural adaptations of two stalk-forming bacteria to an Fe-oxidizing lifestyle". Environmental Microbiology. 13 (11): 2915–2929. Bibcode:2011EnvMi..13.2915C. doi:10.1111/j.1462-2920.2011.02567.x. PMID 21895918.
Saini, G.; Chan, C. S. (2013). "Near-neutral surface charge and hydrophilicity prevent mineral encrustation of Fe-oxidizing micro-organisms". Geobiology. 11 (2): 191–200. Bibcode:2013Gbio...11..191S. doi:10.1111/gbi.12021. PMID 23279435. S2CID 205139903.
Fleming, E. J.; Davis, R. E.; McAllister, S. M.; Chan, C. S.; Moyer, C. L.; Tebo, B. M.; Emerson, D. (2013). "Hidden in plain sight: Discovery of sheath-forming, iron-oxidizing Zetaproteobacteriaat Loihi Seamount, Hawaii, USA". FEMS Microbiology Ecology. 85 (1): 116–127. Bibcode:2013FEMME..85..116F. doi:10.1111/1574-6941.12104. PMID 23480633.
Hofmann, B. A.; Farmer, J. D.; von Blanckenburg, F.; Fallick, A. E. (2008). "Subsurface Filamentous Fabrics: An Evaluation of Origins Based on Morphological and Geochemical Criteria, with Implications for Exopaleontology". Astrobiology. 8 (1): 87–117. Bibcode:2008AsBio...8...87H. doi:10.1089/ast.2007.0130. PMID 18241094.
Planavsky, N.; Rouxel, O.; Bekker, A.; Shapiro, R.; Fralick, P.; Knudsen, A. (2009). "Iron-oxidizing microbial ecosystems thrived in late Paleoproterozoic redox-stratified oceans". Earth and Planetary Science Letters. 286 (1–2): 230–242. Bibcode:2009E&PSL.286..230P. doi:10.1016/j.epsl.2009.06.033.
Little, C. T. S.; Glynn, S. E. J.; Mills, R. A. (2004). "Four-Hundred-and-Ninety-Million-Year Record of Bacteriogenic Iron Oxide Precipitation at Sea-Floor Hydrothermal Vents" (PDF). Geomicrobiology Journal. 21 (6): 415–429. Bibcode:2004GmbJ...21..415L. doi:10.1080/01490450490485845. S2CID 54894240.
Sun, Z.; Li, J.; Huang, W.; Dong, H.; Little, C. T. S.; Li, J. (2015). "Generation of hydrothermal Fe-Si oxyhydroxide deposit on the Southwest Indian Ridge and its implication for the origin of ancient banded iron formations" (PDF). Journal of Geophysical Research: Biogeosciences. 120 (1): 187–203. Bibcode:2015JGRG..120..187S. doi:10.1002/2014JG002764. S2CID 62895694.
Krepski, S. T.; Emerson, D.; Hredzak-Showalter, P. L.; Luther, G. W.; Chan, C. S. (2013). "Morphology of biogenic iron oxides records microbial physiology and environmental conditions: Toward interpreting iron microfossils". Geobiology. 11 (5): 457–71. Bibcode:2013Gbio...11..457K. doi:10.1111/gbi.12043. PMID 23790206. S2CID 350074.
Chan, C. S.; Fakra, S. C.; Edwards, D. C.; Emerson, D.; Banfield, J. F. (2009). "Iron oxyhydroxide mineralization on microbial extracellular polysaccharides". Geochimica et Cosmochimica Acta. 73 (13): 3807–3818. Bibcode:2009GeCoA..73.3807C. doi:10.1016/j.gca.2009.02.036. S2CID 31706001.
Bennett, S. A.; Toner, B. M.; Barco, R.; Edwards, K. J. (2014). "Carbon adsorption onto Fe oxyhydroxide stalks produced by a lithotrophic iron-oxidizing bacteria". Geobiology. 12 (2): 146–156. Bibcode:2014Gbio...12..146B. doi:10.1111/gbi.12074. PMID 24428517. S2CID 205140009.
Rassa, A. C.; McAllister, S. M.; Safran, S. A.; Moyer, C. L. (2009). "Zeta-Proteobacteria Dominate the Colonization and Formation of Microbial Mats in Low-Temperature Hydrothermal Vents at Loihi Seamount, Hawaii". Geomicrobiology Journal. 26 (8): 623–638. Bibcode:2009GmbJ...26..623R. doi:10.1080/01490450903263350. S2CID 53617751.
Emerson, D.; Moyer, C. (2010). "Microbiology of Seamounts: Common Patterns Observed in Community Structure". Oceanography. 23: 148–163. doi:10.5670/oceanog.2010.67.
Sudek, L. A.; Templeton, A. S.; Tebo, B. M.; Staudigel, H. (2009). "Microbial Ecology of Fe (hydr)oxide Mats and Basaltic Rock from Vailulu'u Seamount, American Samoa". Geomicrobiology Journal. 26 (8): 581–596. Bibcode:2009GmbJ...26..581S. doi:10.1080/01490450903263400. S2CID 85954222.
Edwards, K. J.; Glazer, B. T.; Rouxel, O. J.; Bach, W.; Emerson, D.; Davis, R. E.; Toner, B. M.; Chan, C. S.; Tebo, B. M.; Staudigel, H.; Moyer, C. L. (2011). "Ultra-diffuse hydrothermal venting supports Fe-oxidizing bacteria and massive umber deposition at 5000 m off Hawaii". The ISME Journal. 5 (11): 1748–1758. Bibcode:2011ISMEJ...5.1748E. doi:10.1038/ismej.2011.48. PMC 3197161. PMID 21544100.
Kato, S.; Kobayashi, C.; Kakegawa, T.; Yamagishi, A. (2009). "Microbial communities in iron-silica-rich microbial mats at deep-sea hydrothermal fields of the Southern Mariana Trough". Environmental Microbiology. 11 (8): 2094–2111. Bibcode:2009EnvMi..11.2094K. doi:10.1111/j.1462-2920.2009.01930.x. PMID 19397679.
Davis, R. E.; Moyer, C. L. (2008). "Extreme spatial and temporal variability of hydrothermal microbial mat communities along the Mariana Island Arc and southern Mariana back-arc system". Journal of Geophysical Research. 113 (B8): B08S15. Bibcode:2008JGRB..113.8S15D. doi:10.1029/2007JB005413.
Kato, S.; Nakamura, K.; Toki, T.; Ishibashi, J. I.; Tsunogai, U.; Hirota, A.; Ohkuma, M.; Yamagishi, A. (2012). "Iron-Based Microbial Ecosystem on and Below the Seafloor: A Case Study of Hydrothermal Fields of the Southern Mariana Trough". Frontiers in Microbiology. 3: 89. doi:10.3389/fmicb.2012.00089. PMC 3304087. PMID 22435065.
Meyer-Dombard, D. A. R.; Amend, J. P.; Osburn, M. R. (2012). "Microbial diversity and potential for arsenic and iron biogeochemical cycling at an arsenic rich, shallow-sea hydrothermal vent (Tutum Bay, Papua New Guinea)". Chemical Geology. 348: 37–47. doi:10.1016/j.chemgeo.2012.02.024.
Li, J.; Zhou, H.; Peng, X.; Wu, Z.; Chen, S.; Fang, J. (2012). "Microbial diversity and biomineralization in low-temperature hydrothermal iron-silica-rich precipitates of the Lau Basin hydrothermal field". FEMS Microbiology Ecology. 81 (1): 205–216. Bibcode:2012FEMME..81..205L. doi:10.1111/j.1574-6941.2012.01367.x. PMID 22443540.
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MacDonald, D. J.; Findlay, A. J.; McAllister, S. M.; Barnett, J. M.; Hredzak-Showalter, P.; Krepski, S. T.; Cone, S. G.; Scott, J.; Bennett, S. K.; Chan, C. S.; Emerson, D.; Luther Iii, G. W. (2014). "Using in situ voltammetry as a tool to identify and characterize habitats of iron-oxidizing bacteria: From fresh water wetlands to hydrothermal vent sites". Environmental Science: Processes & Impacts. 16 (9): 2117–2126. doi:10.1039/c4em00073k. PMID 24924809.
Scott, J. J.; Breier, J. A.; Luther, G. W.; Emerson, D. (2015). "Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems". PLOS ONE. 10 (3): e0119284. Bibcode:2015PLoSO..1019284S. doi:10.1371/journal.pone.0119284. PMC 4356598. PMID 25760332.
Cao, H.; Wang, Y.; Lee, O. O.; Zeng, X.; Shao, Z.; Qian, P. -Y. (2014). "Microbial Sulfur Cycle in Two Hydrothermal Chimneys on the Southwest Indian Ridge". mBio. 5 (1): e00980–e00913. doi:10.1128/mBio.00980-13. PMC 3903282. PMID 24473131.
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Dhillon, A.; Teske, A.; Dillon, J.; Stahl, D. A.; Sogin, M. L. (2003). "Molecular characterization of sulfate-reducing bacteria in the Guaymas Basin". Applied and Environmental Microbiology. 69 (5): 2765–2772. Bibcode:2003ApEnM..69.2765D. doi:10.1128/AEM.69.5.2765-2772.2003. PMC 154542. PMID 12732547.
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Jacobson Meyers, M. E.; Sylvan, J. B.; Edwards, K. J. (2014). "Extracellular Enzyme Activity and Microbial Diversity Measured on Seafloor Exposed Basalts from Loihi Seamount Indicate the Importance of Basalts to Global Biogeochemical Cycling". Applied and Environmental Microbiology. 80 (16): 4854–64. Bibcode:2014ApEnM..80.4854J. doi:10.1128/AEM.01038-14. PMC 4135773. PMID 24907315.
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Pischedda, L.; Militon, C. C.; Gilbert, F.; Cuny, P. (2011). "Characterization of specificity of bacterial community structure within the burrow environment of the marine polychaete Hediste (Nereis) diversicolor". Research in Microbiology. 162 (10): 1033–42. doi:10.1016/j.resmic.2011.07.008. PMID 21946148. S2CID 11103232.
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Ionescu, D.; Heim, C.; Polerecky, L.; Ramette, A.; Haeusler, S.; Bizic-Ionescu, M.; Thiel, V.; De Beer, D. (2015). "Diversity of Iron Oxidizing and Reducing Bacteria in Flow Reactors in the Äspö Hard Rock Laboratory". Geomicrobiology Journal. 32 (3–4): 207–220. Bibcode:2015GmbJ...32..207I. doi:10.1080/01490451.2014.884196. hdl:1874/330162. S2CID 96387274.
Zbinden, M.; Cambon-Bonavita, M. A. (2003). "Occurrence of Deferribacterales and Entomoplasmatales in the deep-sea Alvinocarid shrimp Rimicaris exoculata gut". FEMS Microbiology Ecology. 46 (1): 23–30. Bibcode:2003FEMME..46...23Z. doi:10.1016/S0168-6496(03)00176-4. PMID 19719579.
Jan, C.; Petersen, J. M.; Werner, J.; Teeling, H.; Huang, S.; Glöckner, F. O.; Golyshina, O. V.; Dubilier, N.; Golyshin, P. N.; Jebbar, M.; Cambon-Bonavita, M. A. (2014). "The gill chamber epibiosis of deep-sea shrimp Rimicarisexoculata: An in-depth metagenomic investigation and discovery of Zetaproteobacteria". Environmental Microbiology. 16 (9): 2723–38. Bibcode:2014EnvMi..16.2723J. doi:10.1111/1462-2920.12406. PMID 24447589.
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handle.net

hdl.handle.net

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nih.gov

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ncbi.nlm.nih.gov

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Chan, C. S.; Fakra, S. C.; Emerson, D.; Fleming, E. J.; Edwards, K. J. (2010). "Lithotrophic iron-oxidizing bacteria produce organic stalks to control mineral growth: Implications for biosignature formation". The ISME Journal. 5 (4): 717–727. doi:10.1038/ismej.2010.173. PMC 3105749. PMID 21107443.
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Scott, J. J.; Breier, J. A.; Luther, G. W.; Emerson, D. (2015). "Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems". PLOS ONE. 10 (3): e0119284. Bibcode:2015PLoSO..1019284S. doi:10.1371/journal.pone.0119284. PMC 4356598. PMID 25760332.
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