Αr7 RNA (English Wikipedia)

Analysis of information sources in references of the Wikipedia article "Αr7 RNA" in English language version.

refsWebsite

Global rank English rank

26nih.gov

4^th place

14doi.org

2^nd place

2web.archive.org

1^st place

1sanger.ac.uk

low place

1harvard.edu

18^th place

17^th place

1yale.edu

565^th place

460^th place

1semanticscholar.org

11^th place

8^th place

1lbl.gov

2,509^th place

2,329^th place

1unam.mx

769^th place

1,834^th place

1sdsc.edu

low place

doi.org

del Val C, Rivas E, Torres-Quesada O, Toro N, Jiménez-Zurdo JI (2007). "Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics". Mol Microbiol. 66 (5): 1080–1091. doi:10.1111/j.1365-2958.2007.05978.x. PMC 2780559. PMID 17971083.
Vincent M Ulvé; Emeric W Sevin; Angélique Chéron; Frédérique Barloy-Hubler (2007). "Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021". BMC Genomics. 8 (467): 467. doi:10.1186/1471-2164-8-467. PMC 2245857. PMID 18093320.
Claudio Valverde; Jonathan Livny; Jan-Philip Schlüter; Jan Reinkensmeier; Anke Becker; Gustavo Parisi (2009). "rediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011". BMC Genomics. 9 (406): 416. doi:10.1186/1471-2164-9-416. PMC 2573895. PMID 18793445.
Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A (2010). "A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti". BMC Genomics. 11 (245): 436. doi:10.1186/1471-2164-11-436. PMC 3091635. PMID 20637113.
Nawrocki EP, Kolbe DL, Eddy SR (2009). "Infernal 1.0: inference of RNA alignments". Bioinformatics. 25 (10): 1335–1337. doi:10.1093/bioinformatics/btp157. PMC 2732312. PMID 19307242.
Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R (2007). "Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering". PLOS Comput Biol. 4 (65): e65. Bibcode:2007PLSCB...3...65W. doi:10.1371/journal.pcbi.0030065. PMC 1851984. PMID 17432929.
I. L. Hofacker; W. Fontana; P. F. Stadler; L. S. Bonhoeffer; M. Tacke; P. Schuster (1994). "Fast folding and comparison of RNA secondary structures". Monatshefte für Chemie. 125 (2): 167–188. doi:10.1007/BF00818163. S2CID 19344304.
Stephan H Bernhart; Ivo L Hofacker; Sebastian Will; Andreas R Gruber; Peter F Stadler (2008). "RNAalifold: improved consensus structure prediction for RNA alignments". BMC Bioinformatics. 9 (474): 474. doi:10.1186/1471-2105-9-474. PMC 2621365. PMID 19014431.
MacLellan SR, MacLean AM, Finan TM (2006). "Promoter prediction in the rhizobia". Microbiology. 152 (6): 1751–1763. doi:10.1099/mic.0.28743-0. PMID 16735738.
Novichkov PS, Rodionov DA, Stavrovskaya ED, Novichkova ES, Kazakov AE, Gelfand MS, Arkin AP, Mironov AA, Dubchak I (2010). "RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach". Nucleic Acids Research. 38 (Web Server issue): W299–W307. doi:10.1093/nar/gkq531. PMC 2896116. PMID 20542910.
Gama-Castro S, Salgado H, Peralta-Gil M, Santos-Zavaleta A, Muniz-Rascado L, Solano-Lira H, Jimenez-Jacinto V, Weiss V, Garcia-Sotelo JS, Lopez-Fuentes A, Porron-Sotelo L, Alquicira-Hernandez S, Medina-Rivera A, Martinez-Flores I, Alquicira-Hernandez K, Martinez-Adame R, Bonavides-Martinez C, Miranda-Rios J, Huerta AM, Mendoza-Vargas A, Collado-Torres L, Taboada B, Vega-Alvarado L, Olvera M, Olvera L, Grande R, Morett E, Collado-Vides J (2010). "RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)". Nucleic Acids Research. 39 (Database issue): D98–D105. doi:10.1093/nar/gkq1110. PMC 3013702. PMID 21051347.
Vinayagam A, del Val C, Schubert F, Eils R, Glatting KH, Suhai S, König R (2006). "GOPET: a tool for automated predictions of Gene Ontology terms". BMC Bioinformatics. 7: 171. doi:10.1186/1471-2105-7-161. PMC 1434778. PMID 16549020.
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005). "Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research". Bioinformatics. 21 (18): 3674–3676. doi:10.1093/bioinformatics/bti610. PMID 16081474.
del Val C, Ernst P, Falkenhahn M, Fladerer C, Glatting KH, Suhai S, Hotz-Wagenblatt A (July 2007). "ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ". Nucleic Acids Res. 35 (Web Server issue): W444–50. doi:10.1093/nar/gkm364. PMC 1933246. PMID 17526514.

harvard.edu

ui.adsabs.harvard.edu

Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R (2007). "Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering". PLOS Comput Biol. 4 (65): e65. Bibcode:2007PLSCB...3...65W. doi:10.1371/journal.pcbi.0030065. PMC 1851984. PMID 17432929.

lbl.gov

regpredict.lbl.gov

"regpredict.lbl.gov". Archived from the original on 23 March 2012. Retrieved 14 May 2012.

nih.gov

pubmed.ncbi.nlm.nih.gov

del Val C, Rivas E, Torres-Quesada O, Toro N, Jiménez-Zurdo JI (2007). "Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics". Mol Microbiol. 66 (5): 1080–1091. doi:10.1111/j.1365-2958.2007.05978.x. PMC 2780559. PMID 17971083.
Vincent M Ulvé; Emeric W Sevin; Angélique Chéron; Frédérique Barloy-Hubler (2007). "Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021". BMC Genomics. 8 (467): 467. doi:10.1186/1471-2164-8-467. PMC 2245857. PMID 18093320.
Claudio Valverde; Jonathan Livny; Jan-Philip Schlüter; Jan Reinkensmeier; Anke Becker; Gustavo Parisi (2009). "rediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011". BMC Genomics. 9 (406): 416. doi:10.1186/1471-2164-9-416. PMC 2573895. PMID 18793445.
Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A (2010). "A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti". BMC Genomics. 11 (245): 436. doi:10.1186/1471-2164-11-436. PMC 3091635. PMID 20637113.
Nawrocki EP, Kolbe DL, Eddy SR (2009). "Infernal 1.0: inference of RNA alignments". Bioinformatics. 25 (10): 1335–1337. doi:10.1093/bioinformatics/btp157. PMC 2732312. PMID 19307242.
Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R (2007). "Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering". PLOS Comput Biol. 4 (65): e65. Bibcode:2007PLSCB...3...65W. doi:10.1371/journal.pcbi.0030065. PMC 1851984. PMID 17432929.
Stephan H Bernhart; Ivo L Hofacker; Sebastian Will; Andreas R Gruber; Peter F Stadler (2008). "RNAalifold: improved consensus structure prediction for RNA alignments". BMC Bioinformatics. 9 (474): 474. doi:10.1186/1471-2105-9-474. PMC 2621365. PMID 19014431.
MacLellan SR, MacLean AM, Finan TM (2006). "Promoter prediction in the rhizobia". Microbiology. 152 (6): 1751–1763. doi:10.1099/mic.0.28743-0. PMID 16735738.
Novichkov PS, Rodionov DA, Stavrovskaya ED, Novichkova ES, Kazakov AE, Gelfand MS, Arkin AP, Mironov AA, Dubchak I (2010). "RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach". Nucleic Acids Research. 38 (Web Server issue): W299–W307. doi:10.1093/nar/gkq531. PMC 2896116. PMID 20542910.
Gama-Castro S, Salgado H, Peralta-Gil M, Santos-Zavaleta A, Muniz-Rascado L, Solano-Lira H, Jimenez-Jacinto V, Weiss V, Garcia-Sotelo JS, Lopez-Fuentes A, Porron-Sotelo L, Alquicira-Hernandez S, Medina-Rivera A, Martinez-Flores I, Alquicira-Hernandez K, Martinez-Adame R, Bonavides-Martinez C, Miranda-Rios J, Huerta AM, Mendoza-Vargas A, Collado-Torres L, Taboada B, Vega-Alvarado L, Olvera M, Olvera L, Grande R, Morett E, Collado-Vides J (2010). "RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)". Nucleic Acids Research. 39 (Database issue): D98–D105. doi:10.1093/nar/gkq1110. PMC 3013702. PMID 21051347.
Bailey TL, Elkan C (1994). "Fitting a mixture model by expectation maximization to discover motifs in biopolymers". Proceedings. International Conference on Intelligent Systems for Molecular Biology. 2: 28–36. PMID 7584402.
Vinayagam A, del Val C, Schubert F, Eils R, Glatting KH, Suhai S, König R (2006). "GOPET: a tool for automated predictions of Gene Ontology terms". BMC Bioinformatics. 7: 171. doi:10.1186/1471-2105-7-161. PMC 1434778. PMID 16549020.
Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M (2005). "Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research". Bioinformatics. 21 (18): 3674–3676. doi:10.1093/bioinformatics/bti610. PMID 16081474.
del Val C, Ernst P, Falkenhahn M, Fladerer C, Glatting KH, Suhai S, Hotz-Wagenblatt A (July 2007). "ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ". Nucleic Acids Res. 35 (Web Server issue): W444–50. doi:10.1093/nar/gkm364. PMC 1933246. PMID 17526514.

ncbi.nlm.nih.gov

del Val C, Rivas E, Torres-Quesada O, Toro N, Jiménez-Zurdo JI (2007). "Identification of differentially expressed small non-coding RNAs in the legume endosymbiont Sinorhizobium meliloti by comparative genomics". Mol Microbiol. 66 (5): 1080–1091. doi:10.1111/j.1365-2958.2007.05978.x. PMC 2780559. PMID 17971083.
Vincent M Ulvé; Emeric W Sevin; Angélique Chéron; Frédérique Barloy-Hubler (2007). "Identification of chromosomal alpha-proteobacterial small RNAs by comparative genome analysis and detection in Sinorhizobium meliloti strain 1021". BMC Genomics. 8 (467): 467. doi:10.1186/1471-2164-8-467. PMC 2245857. PMID 18093320.
Claudio Valverde; Jonathan Livny; Jan-Philip Schlüter; Jan Reinkensmeier; Anke Becker; Gustavo Parisi (2009). "rediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011". BMC Genomics. 9 (406): 416. doi:10.1186/1471-2164-9-416. PMC 2573895. PMID 18793445.
Schlüter JP, Reinkensmeier J, Daschkey S, Evguenieva-Hackenberg E, Janssen S, Jänicke S, Becker JD, Giegerich R, Becker A (2010). "A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti". BMC Genomics. 11 (245): 436. doi:10.1186/1471-2164-11-436. PMC 3091635. PMID 20637113.
"NCBI". Retrieved 14 May 2012.
Nawrocki EP, Kolbe DL, Eddy SR (2009). "Infernal 1.0: inference of RNA alignments". Bioinformatics. 25 (10): 1335–1337. doi:10.1093/bioinformatics/btp157. PMC 2732312. PMID 19307242.
Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R (2007). "Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering". PLOS Comput Biol. 4 (65): e65. Bibcode:2007PLSCB...3...65W. doi:10.1371/journal.pcbi.0030065. PMC 1851984. PMID 17432929.
Stephan H Bernhart; Ivo L Hofacker; Sebastian Will; Andreas R Gruber; Peter F Stadler (2008). "RNAalifold: improved consensus structure prediction for RNA alignments". BMC Bioinformatics. 9 (474): 474. doi:10.1186/1471-2105-9-474. PMC 2621365. PMID 19014431.
Novichkov PS, Rodionov DA, Stavrovskaya ED, Novichkova ES, Kazakov AE, Gelfand MS, Arkin AP, Mironov AA, Dubchak I (2010). "RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach". Nucleic Acids Research. 38 (Web Server issue): W299–W307. doi:10.1093/nar/gkq531. PMC 2896116. PMID 20542910.
Gama-Castro S, Salgado H, Peralta-Gil M, Santos-Zavaleta A, Muniz-Rascado L, Solano-Lira H, Jimenez-Jacinto V, Weiss V, Garcia-Sotelo JS, Lopez-Fuentes A, Porron-Sotelo L, Alquicira-Hernandez S, Medina-Rivera A, Martinez-Flores I, Alquicira-Hernandez K, Martinez-Adame R, Bonavides-Martinez C, Miranda-Rios J, Huerta AM, Mendoza-Vargas A, Collado-Torres L, Taboada B, Vega-Alvarado L, Olvera M, Olvera L, Grande R, Morett E, Collado-Vides J (2010). "RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)". Nucleic Acids Research. 39 (Database issue): D98–D105. doi:10.1093/nar/gkq1110. PMC 3013702. PMID 21051347.
Vinayagam A, del Val C, Schubert F, Eils R, Glatting KH, Suhai S, König R (2006). "GOPET: a tool for automated predictions of Gene Ontology terms". BMC Bioinformatics. 7: 171. doi:10.1186/1471-2105-7-161. PMC 1434778. PMID 16549020.
del Val C, Ernst P, Falkenhahn M, Fladerer C, Glatting KH, Suhai S, Hotz-Wagenblatt A (July 2007). "ProtSweep, 2Dsweep and DomainSweep: protein analysis suite at DKFZ". Nucleic Acids Res. 35 (Web Server issue): W444–50. doi:10.1093/nar/gkm364. PMC 1933246. PMID 17526514.

sanger.ac.uk

"Sanger – Software". Retrieved 14 May 2012.

sdsc.edu

meme.sdsc.edu

"meme.sdsc.edu/meme4_6_1/intro.html". Archived from the original on 29 September 2011. Retrieved 14 May 2012.

semanticscholar.org

api.semanticscholar.org

I. L. Hofacker; W. Fontana; P. F. Stadler; L. S. Bonhoeffer; M. Tacke; P. Schuster (1994). "Fast folding and comparison of RNA secondary structures". Monatshefte für Chemie. 125 (2): 167–188. doi:10.1007/BF00818163. S2CID 19344304.

unam.mx

regulondb.ccg.unam.mx

"regulondb.ccg.unam.mx". Retrieved 14 May 2012.

web.archive.org

"regpredict.lbl.gov". Archived from the original on 23 March 2012. Retrieved 14 May 2012.
"meme.sdsc.edu/meme4_6_1/intro.html". Archived from the original on 29 September 2011. Retrieved 14 May 2012.

yale.edu

gps-tools2.its.yale.edu

"Covariance Model in stockholm format". Retrieved 14 May 2012.