References analysis of the Wikipedia article "Promiscuidad enzimática" in the Spanish version

doi.org

dx.doi.org

Tawfik, O. K. A. D. S.; Tawfik, D. S. (2010). «Enzyme Promiscuity: A Mechanistic and Evolutionary Perspective». Annual Review of Biochemistry 79: 471-505. PMID 20235827. doi:10.1146/annurev-biochem-030409-143718.

Scott, C.; Jackson, C. J.; Coppin, C. W.; Mourant, R. G.; Hilton, M. E.; Sutherland, T. D.; Russell, R. J.; Oakeshott, J. G. (2009). «Catalytic Improvement and Evolution of Atrazine Chlorohydrolase». Applied and Environmental Microbiology 75 (7): 2184-2191. PMC 2663207. PMID 19201959. doi:10.1128/AEM.02634-08.

Voordeckers, K.; Brown, C. A.; Vanneste, K.; Van Der Zande, E.; Voet, A.; Maere, S.; Verstrepen, K. J. (2012). «Reconstruction of Ancestral Metabolic Enzymes Reveals Molecular Mechanisms Underlying Evolutionary Innovation through Gene Duplication». En Thornton, Joseph W, ed. PLoS Biology 10 (12): e1001446. PMC 3519909. PMID 23239941. doi:10.1371/journal.pbio.1001446.

Patrick, W. M.; Quandt, E. M.; Swartzlander, D. B.; Matsumura, I. (2007). «Multicopy Suppression Underpins Metabolic Evolvability». Molecular Biology and Evolution 24 (12): 2716-2722. PMC 2678898. PMID 17884825. doi:10.1093/molbev/msm204.

Aharoni, A.; Gaidukov, L.; Khersonsky, O.; Gould, S. M.; Roodveldt, C.; Tawfik, D. S. (2004). «The 'evolvability' of promiscuous protein functions». Nature Genetics 37 (1): 73-76. PMID 15568024. doi:10.1038/ng1482.

Tokuriki, N.; Jackson, C. J.; Afriat-Jurnou, L.; Wyganowski, K. T.; Tang, R.; Tawfik, D. S. (2012). «Diminishing returns and tradeoffs constrain the laboratory optimization of an enzyme». Nature Communications 3: 1257. PMID 23212386. doi:10.1038/ncomms2246.

Williams, P. D.; Pollock, D. D.; Blackburne, B. P.; Goldstein, R. A. (2006). «Assessing the Accuracy of Ancestral Protein Reconstruction Methods». PLoS Computational Biology 2 (6): e69. PMC 1480538. PMID 16789817. doi:10.1371/journal.pcbi.0020069.

Stemmer, W. P.; Crameri, A.; Ha, K. D.; Brennan, T. M.; Heyneker, H. L. (1995). «Single-step assembly of a gene and entire plasmid from large numbers of oligodeoxyribonucleotides». Gene 164 (1): 49-53. PMID 7590320. doi:10.1016/0378-1119(95)00511-4.

Thornton, J. W. (2004). «Resurrecting ancient genes: Experimental analysis of extinct molecules». Nature Reviews Genetics 5 (5): 366-375. PMID 15143319. doi:10.1038/nrg1324. Archivado desde el original el 27 de marzo de 2012. Consultado el 7 de septiembre de 2014.

Thornton, J. W.; Need, E.; Crews, D. (2003). «Resurrecting the Ancestral Steroid Receptor: Ancient Origin of Estrogen Signaling». Science 301 (5640): 1714-1717. PMID 14500980. doi:10.1126/science.1086185.

Jensen, R. A. (1976). «Enzyme Recruitment in Evolution of New Function». Annual Review of Microbiology 30: 409-425. PMID 791073. doi:10.1146/annurev.mi.30.100176.002205.

Fondi, M.; Brilli, M.; Emiliani, G.; Paffetti, D.; Fani, R. (2007). «The primordial metabolism: An ancestral interconnection between leucine, arginine, and lysine biosynthesis». BMC Evolutionary Biology 7: S3. doi:10.1186/1471-2148-7-S2-S3.

Baba, T.; Ara, T.; Hasegawa, M.; Takai, Y.; Okumura, Y.; Baba, M.; Datsenko, K. A.; Tomita, M.; Wanner, B. L.; Mori, H. (2006). «Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection». Molecular Systems Biology 2: 2006.0008. PMC 1681482. PMID 16738554. doi:10.1038/msb4100050.

Kitagawa, M.; Ara, T.; Arifuzzaman, M.; Ioka-Nakamichi, T.; Inamoto, E.; Toyonaga, H.; Mori, H. (2006). «Complete set of ORF clones of Escherichia coli ASKA library (A Complete Set of E. Coli K-12 ORF Archive): Unique Resources for Biological Research». DNA Research 12 (5): 291-299. PMID 16769691. doi:10.1093/dnares/dsi012.

Soo, V. W. C.; Hanson-Manful, P.; Patrick, W. M. (2010). «Artificial gene amplification reveals an abundance of promiscuous resistance determinants in Escherichia coli». Proceedings of the National Academy of Sciences 108 (4): 1484. doi:10.1073/pnas.1012108108.

O'Brien, P. J.; Herschlag, D. (2001). «Functional interrelationships in the alkaline phosphatase superfamily: Phosphodiesterase activity of Escherichia coli alkaline phosphatase». Biochemistry 40 (19): 5691-5699. PMID 11341834. doi:10.1021/bi0028892.

Zhao, C.; Kumada, Y.; Imanaka, H.; Imamura, K.; Nakanishi, K. (2006). «Cloning, overexpression, purification, and characterization of O-acetylserine sulfhydrylase-B from Escherichia coli». Protein Expression and Purification 47 (2): 607-613. PMID 16546401. doi:10.1016/j.pep.2006.01.002.

Tokuriki, N.; Tawfik, D. S. (2009). «Stability effects of mutations and protein evolvability». Current Opinion in Structural Biology 19 (5): 596-604. PMID 19765975. doi:10.1016/j.sbi.2009.08.003.

Daumann, L. J.; McCarthy, B. Y.; Hadler, K. S.; Murray, T. P.; Gahan, L. R.; Larrabee, J. A.; Ollis, D. L.; Schenk, G. (2013). «Promiscuity comes at a price: Catalytic versatility vs efficiency in different metal ion derivatives of the potential bioremediator GpdQ». Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1834 (1): 425-432. PMID 22366468. doi:10.1016/j.bbapap.2012.02.004.

Schmidt, D. M. Z.; Mundorff, E. C.; Dojka, M.; Bermudez, E.; Ness, J. E.; Govindarajan, S.; Babbitt, P. C.; Minshull, J.; Gerlt, J. A. (2003). «Evolutionary Potential of (β/α)8-Barrels: Functional Promiscuity Produced by Single Substitutions in the Enolase Superfamily†». Biochemistry 42 (28): 8387-8393. PMID 12859183. doi:10.1021/bi034769a.

Yoshikuni, Y.; Ferrin, T. E.; Keasling, J. D. (2006). «Designed divergent evolution of enzyme function». Nature 440 (7087): 1078-1082. Bibcode:2006Natur.440.1078Y. PMID 16495946. doi:10.1038/nature04607.

Ma, W.; Tang, C.; Lai, L. (2005). «Specificity of Trypsin and Chymotrypsin: Loop-Motion-Controlled Dynamic Correlation as a Determinant». Biophysical Journal 89 (2): 1183-1193. PMC 1366603. PMID 15923233. doi:10.1529/biophysj.104.057158.

Perona, J. J.; Hadd, A. (2012). «Structural Diversity and Protein Engineering of the Aminoacyl-tRNA Synthetases». Biochemistry 51 (44): 8705-8729. PMID 23075299. doi:10.1021/bi301180x.

Villiers, B. R. M.; Hollfelder, F. (2009). «Mapping the Limits of Substrate Specificity of the Adenylation Domain of TycA». ChemBioChem 10 (4): 671-682. PMID 19189362. doi:10.1002/cbic.200800553.

Vasu, K.; Nagamalleswari, E.; Nagaraja, V. (2012). «PNAS Plus: Promiscuous restriction is a cellular defense strategy that confers fitness advantage to bacteria». Proceedings of the National Academy of Sciences 109 (20): E1287-E1293. PMC 3356625. PMID 22509013. doi:10.1073/pnas.1119226109.}

Weng, J. -K.; Philippe, R. N.; Noel, J. P. (2012). «The Rise of Chemodiversity in Plants». Science 336 (6089): 1667-1670. PMID 22745420. doi:10.1126/science.1217411.

Bornscheuer, U. T.; Huisman, G. W.; Kazlauskas, R. J.; Lutz, S.; Moore, J. C.; Robins, K. (2012). «Engineering the third wave of biocatalysis». Nature 485 (7397): 185-194. PMID 22575958. doi:10.1038/nature11117.

Shin, J. S.; Kim, B. G. (2001). «Comparison of the omega-transaminases from different microorganisms and application to production of chiral amines». Bioscience, biotechnology, and biochemistry 65 (8): 1782-1788. PMID 11577718. doi:10.1271/bbb.65.1782.

Maier, T. H. P. (2003). «Semisynthetic production of unnatural L-α-amino acids by metabolic engineering of the cysteine-biosynthetic pathway». Nature Biotechnology 21 (4): 422-427. PMID 12640465. doi:10.1038/nbt807.

nih.gov

ncbi.nlm.nih.gov

Wouters, M. A.; Liu, K.; Riek, P.; Husain, A. (2003). «A despecialization step underlying evolution of a family of serine proteases». Molecular cell 12 (2): 343-354. PMID 14536074.

Jensen, R. A. (1976). «Enzyme Recruitment in Evolution of New Function». Annual Review of Microbiology 30: 409-425. PMID 791073. doi:10.1146/annurev.mi.30.100176.002205.

Tokuriki, N.; Tawfik, D. S. (2009). «Stability effects of mutations and protein evolvability». Current Opinion in Structural Biology 19 (5): 596-604. PMID 19765975. doi:10.1016/j.sbi.2009.08.003.

Perona, J. J.; Hadd, A. (2012). «Structural Diversity and Protein Engineering of the Aminoacyl-tRNA Synthetases». Biochemistry 51 (44): 8705-8729. PMID 23075299. doi:10.1021/bi301180x.

Villiers, B. R. M.; Hollfelder, F. (2009). «Mapping the Limits of Substrate Specificity of the Adenylation Domain of TycA». ChemBioChem 10 (4): 671-682. PMID 19189362. doi:10.1002/cbic.200800553.

Weng, J. -K.; Philippe, R. N.; Noel, J. P. (2012). «The Rise of Chemodiversity in Plants». Science 336 (6089): 1667-1670. PMID 22745420. doi:10.1126/science.1217411.

Jakoby, W. B.; Ziegler, D. M. (1990). «The enzymes of detoxication». The Journal of biological chemistry 265 (34): 20715-20718. PMID 2249981.

Promiscuidad enzimática (Spanish Wikipedia)

archive.org

codexis.com

doi.org

dx.doi.org

harvard.edu

adsabs.harvard.edu

nih.gov

ncbi.nlm.nih.gov

uoregon.edu

pages.uoregon.edu

web.archive.org