Teoría de la secuenciación de ADN (Spanish Wikipedia)

Analysis of information sources in references of the Wikipedia article "Teoría de la secuenciación de ADN" in Spanish language version.

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archive.org

Waterman, Michael S. (1995). Introduction to Computational Biology. Boca Raton: Chapman and Hall/CRC. ISBN 978-0-412-99391-6.
Hall, P. (1988). Introduction to the Theory of Coverage Processes. New York: Wiley. ISBN 978-0-471-85702-0.

doi.org

dx.doi.org

Stevens WL (1939). «Solution to a Geometrical Problem in Probability». Annals of Eugenics 9 (4): 315-320. doi:10.1111/j.1469-1809.1939.tb02216.x.
«A colony bank containing synthetic Col-El hybrid plasmids representative of the entire E. coli genome». Cell 9 (1): 91-99. 1976. PMID 788919. doi:10.1016/0092-8674(76)90055-6.
Lander ES, Waterman MS (1988). «Genomic mapping by fingerprinting random clones: a mathematical analysis». Genomics 2 (3): 231-239. PMID 3294162. doi:10.1016/0888-7543(88)90007-9.
Roach JC (1995). «Random subcloning». Genome Research 5 (5): 464-473. PMID 8808467. doi:10.1101/gr.5.5.464.
Wendl MC, Waterston RH (2002). «Generalized gap model for bacterial artificial chromosome clone fingerprint mapping and shotgun sequencing». Genome Research 12 (12): 1943-1949. PMC 187573. PMID 12466299. doi:10.1101/gr.655102.
Arratia R (1991). «Genomic mapping by anchoring random clones: a mathematical analysis». Genomics 11 (4): 806-827. PMID 1783390. doi:10.1016/0888-7543(91)90004-X.
Port E (1995). «Genomic mapping by end-characterized random clones: a mathematical analysis». Genomics 26 (1): 84-100. PMID 7782090. doi:10.1016/0888-7543(95)80086-2.
«Genome mapping by nonrandom anchoring: a discrete theoretical analysis». Proceedings of the National Academy of Sciences 90 (2): 600-604. 1993. Bibcode:1993PNAS...90..600Z. PMC 45711. PMID 8421694. doi:10.1073/pnas.90.2.600.
Roach JC (2000). «Parking strategies for genome sequencing». Genome Research 10 (7): 1020-1030. PMC 310895. PMID 10899151. doi:10.1101/gr.10.7.1020.
Roach JC, Boysen C, Wang K, Hood L (1995). «Pairwise end sequencing: a unified approach to genomic mapping and sequencing». Genomics 26 (2): 345-353. PMID 7601461. doi:10.1016/0888-7543(95)80219-C.
Wendl MC, Barbazuk WB (2005). «Extension of Lander–Waterman Theory for sequencing filtered DNA libraries». BMC Bioinformatics 6: article 245. PMC 1280921. PMID 16216129. doi:10.1186/1471-2105-6-245.
Wendl MC (2006). «Occupancy modeling of coverage distribution for whole genome shotgun DNA sequencing». Bulletin of Mathematical Biology 68 (1): 179-196. PMID 16794926. doi:10.1007/s11538-005-9021-4.
Wendl MC (2006). «A general coverage theory for shotgun DNA sequencing». Journal of Computational Biology 13 (6): 1177-1196. PMID 16901236. doi:10.1089/cmb.2006.13.1177.
Levy S (2007). «The diploid genome sequence of an individual human». PLOS Biology 5 (10): article e254. PMC 1964779. PMID 17803354. doi:10.1371/journal.pbio.0050254.
Wheeler DA (2008). «The complete genome of an individual by massively parallel DNA sequencing». Nature 452 (7189): 872-876. Bibcode:2008Natur.452..872W. PMID 18421352. doi:10.1038/nature06884.
Wendl MC, Wilson RK (2008). «Aspects of coverage in medical DNA sequencing». BMC Bioinformatics 9: article 239. PMC 2430974. PMID 18485222. doi:10.1186/1471-2105-9-239.
Ley TJ (2008). «DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome». Nature 456 (7218): 66-72. Bibcode:2008Natur.456...66L. PMC 2603574. PMID 18987736. doi:10.1038/nature07485.
Wendl MC, Wilson RK (2009). «Statistical aspects of discerning indel-type structural variation via DNA sequence alignment». BMC Genomics 10: article 359. PMC 2748092. PMID 19656394. doi:10.1186/1471-2164-10-359.
Wendl MC, Wilson RK (2009). «The theory of discovering rare variants via DNA sequencing». BMC Genomics 10: article 485. PMC 2778663. PMID 19843339. doi:10.1186/1471-2164-10-485.
Stanhope SA (2010). «Occupancy modeling maximum contig size probabilities and designing metagenomics experiments». PLOS ONE 5 (7): article e11652. Bibcode:2010PLoSO...511652S. PMC 2912229. PMID 20686599. doi:10.1371/journal.pone.0011652.
Wendl MC (2012). «Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem». Journal of Mathematical Biology 67 (5): 1141-1161. PMC 3795925. PMID 22965653. doi:10.1007/s00285-012-0586-x.
Hooper SD (2010). «Estimating DNA coverage and abundance in metagenomes using a gamma approximation». Bioinformatics 26 (3): 295-301. PMC 2815663. PMID 20008478. doi:10.1093/bioinformatics/btp687.

harvard.edu

adsabs.harvard.edu

«Genome mapping by nonrandom anchoring: a discrete theoretical analysis». Proceedings of the National Academy of Sciences 90 (2): 600-604. 1993. Bibcode:1993PNAS...90..600Z. PMC 45711. PMID 8421694. doi:10.1073/pnas.90.2.600.
Wheeler DA (2008). «The complete genome of an individual by massively parallel DNA sequencing». Nature 452 (7189): 872-876. Bibcode:2008Natur.452..872W. PMID 18421352. doi:10.1038/nature06884.
Ley TJ (2008). «DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome». Nature 456 (7218): 66-72. Bibcode:2008Natur.456...66L. PMC 2603574. PMID 18987736. doi:10.1038/nature07485.
Stanhope SA (2010). «Occupancy modeling maximum contig size probabilities and designing metagenomics experiments». PLOS ONE 5 (7): article e11652. Bibcode:2010PLoSO...511652S. PMC 2912229. PMID 20686599. doi:10.1371/journal.pone.0011652.

nih.gov

ncbi.nlm.nih.gov

«A colony bank containing synthetic Col-El hybrid plasmids representative of the entire E. coli genome». Cell 9 (1): 91-99. 1976. PMID 788919. doi:10.1016/0092-8674(76)90055-6.
Lander ES, Waterman MS (1988). «Genomic mapping by fingerprinting random clones: a mathematical analysis». Genomics 2 (3): 231-239. PMID 3294162. doi:10.1016/0888-7543(88)90007-9.
Roach JC (1995). «Random subcloning». Genome Research 5 (5): 464-473. PMID 8808467. doi:10.1101/gr.5.5.464.
Wendl MC, Waterston RH (2002). «Generalized gap model for bacterial artificial chromosome clone fingerprint mapping and shotgun sequencing». Genome Research 12 (12): 1943-1949. PMC 187573. PMID 12466299. doi:10.1101/gr.655102.
Arratia R (1991). «Genomic mapping by anchoring random clones: a mathematical analysis». Genomics 11 (4): 806-827. PMID 1783390. doi:10.1016/0888-7543(91)90004-X.
Port E (1995). «Genomic mapping by end-characterized random clones: a mathematical analysis». Genomics 26 (1): 84-100. PMID 7782090. doi:10.1016/0888-7543(95)80086-2.
«Genome mapping by nonrandom anchoring: a discrete theoretical analysis». Proceedings of the National Academy of Sciences 90 (2): 600-604. 1993. Bibcode:1993PNAS...90..600Z. PMC 45711. PMID 8421694. doi:10.1073/pnas.90.2.600.
Roach JC (2000). «Parking strategies for genome sequencing». Genome Research 10 (7): 1020-1030. PMC 310895. PMID 10899151. doi:10.1101/gr.10.7.1020.
Roach JC, Boysen C, Wang K, Hood L (1995). «Pairwise end sequencing: a unified approach to genomic mapping and sequencing». Genomics 26 (2): 345-353. PMID 7601461. doi:10.1016/0888-7543(95)80219-C.
Wendl MC, Barbazuk WB (2005). «Extension of Lander–Waterman Theory for sequencing filtered DNA libraries». BMC Bioinformatics 6: article 245. PMC 1280921. PMID 16216129. doi:10.1186/1471-2105-6-245.
Wendl MC (2006). «Occupancy modeling of coverage distribution for whole genome shotgun DNA sequencing». Bulletin of Mathematical Biology 68 (1): 179-196. PMID 16794926. doi:10.1007/s11538-005-9021-4.
Wendl MC (2006). «A general coverage theory for shotgun DNA sequencing». Journal of Computational Biology 13 (6): 1177-1196. PMID 16901236. doi:10.1089/cmb.2006.13.1177.
Levy S (2007). «The diploid genome sequence of an individual human». PLOS Biology 5 (10): article e254. PMC 1964779. PMID 17803354. doi:10.1371/journal.pbio.0050254.
Wheeler DA (2008). «The complete genome of an individual by massively parallel DNA sequencing». Nature 452 (7189): 872-876. Bibcode:2008Natur.452..872W. PMID 18421352. doi:10.1038/nature06884.
Wendl MC, Wilson RK (2008). «Aspects of coverage in medical DNA sequencing». BMC Bioinformatics 9: article 239. PMC 2430974. PMID 18485222. doi:10.1186/1471-2105-9-239.
Ley TJ (2008). «DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome». Nature 456 (7218): 66-72. Bibcode:2008Natur.456...66L. PMC 2603574. PMID 18987736. doi:10.1038/nature07485.
Wendl MC, Wilson RK (2009). «Statistical aspects of discerning indel-type structural variation via DNA sequence alignment». BMC Genomics 10: article 359. PMC 2748092. PMID 19656394. doi:10.1186/1471-2164-10-359.
Wendl MC, Wilson RK (2009). «The theory of discovering rare variants via DNA sequencing». BMC Genomics 10: article 485. PMC 2778663. PMID 19843339. doi:10.1186/1471-2164-10-485.
Stanhope SA (2010). «Occupancy modeling maximum contig size probabilities and designing metagenomics experiments». PLOS ONE 5 (7): article e11652. Bibcode:2010PLoSO...511652S. PMC 2912229. PMID 20686599. doi:10.1371/journal.pone.0011652.
Wendl MC (2012). «Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem». Journal of Mathematical Biology 67 (5): 1141-1161. PMC 3795925. PMID 22965653. doi:10.1007/s00285-012-0586-x.
Hooper SD (2010). «Estimating DNA coverage and abundance in metagenomes using a gamma approximation». Bioinformatics 26 (3): 295-301. PMC 2815663. PMID 20008478. doi:10.1093/bioinformatics/btp687.

wustl.edu

digitalcommons.wustl.edu

Wendl MC (2006). «A general coverage theory for shotgun DNA sequencing». Journal of Computational Biology 13 (6): 1177-1196. PMID 16901236. doi:10.1089/cmb.2006.13.1177.