Ryan D. Morin, Matthew Bainbridge, Anthony Fejes, Martin Hirst, Martin Krzywinski, Trevor J. Pugh, Helen McDonald, Richard Varhol, Steven J.M. Jones, and Marco A. Marra., « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, no 1, , p. 81–94 (PMID18611170, DOI10.2144/000112900, lire en ligne)
doi.org
dx.doi.org
Ryan D. Morin, Matthew Bainbridge, Anthony Fejes, Martin Hirst, Martin Krzywinski, Trevor J. Pugh, Helen McDonald, Richard Varhol, Steven J.M. Jones, and Marco A. Marra., « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, no 1, , p. 81–94 (PMID18611170, DOI10.2144/000112900, lire en ligne)
Chu Y, Corey DR, « RNA sequencing: platform selection, experimental design, and data interpretation », Nucleic Acid Ther, vol. 22, no 4, , p. 271–4 (PMID22830413, PMCID3426205, DOI10.1089/nat.2012.0367)
C. A. Maher, C. Kumar-Sinha, X. Caoet al., « Transcriptome sequencing to detect gene fusions in cancer », Nature, vol. 458, no 7234, , p. 97–101 (PMID19136943, PMCID2725402, DOI10.1038/nature07638)
Ingolia NT, Brar GA, Rouskin S, McGeachy AM, Weissman JS, « The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments », Nat Protoc, vol. 7, no 8, , p. 1534–50 (PMID22836135, PMCID3535016, DOI10.1038/nprot.2012.086)
F. Qian, L. Chung, W. Zheng et . etal, « Identification of Genes Critical for Resistance to Infection by West Nile Virus Using RNA-Seq Analysis », Viruses, vol. 5, no 7, , p. 1664–81 (PMID23881275, DOI10.3390/v5071664)
J. Beane, J. Vick, F. Schembriet al., « Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq », Cancer Prev Res (Phila), vol. 4, no 6, , p. 803–17 (PMID21636547, PMCID3694393, DOI10.1158/1940-6207.CAPR-11-0212)
Donald C. Rio, Manuel Ares, Gregory J. Hannon et Timothy W. Nilsen, « Preparation of cytoplasmic and nuclear RNA from tissue culture cells », Cold Spring Harbor Protocols, vol. 2010, , pdb.prot5441 (ISSN1559-6095, PMID20516179, DOI10.1101/pdb.prot5441, lire en ligne, consulté le )
Ryan Morin, Matthew Bainbridge, Anthony Fejes et Martin Hirst, « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, , p. 81–94 (ISSN0736-6205, PMID18611170, DOI10.2144/000112900, lire en ligne, consulté le )
Ali Mortazavi, Brian A. Williams, Kenneth McCue et Lorian Schaeffer, « Mapping and quantifying mammalian transcriptomes by RNA-Seq », Nature Methods, vol. 5, , p. 621–628 (ISSN1548-7105, PMID18516045, DOI10.1038/nmeth.1226, lire en ligne, consulté le )
Donald C. Rio, Manuel Ares, Gregory J. Hannon et Timothy W. Nilsen, « Preparation of cytoplasmic and nuclear RNA from tissue culture cells », Cold Spring Harbor Protocols, vol. 2010, , pdb.prot5441 (ISSN1559-6095, PMID20516179, DOI10.1101/pdb.prot5441, lire en ligne, consulté le )
Ryan Morin, Matthew Bainbridge, Anthony Fejes et Martin Hirst, « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, , p. 81–94 (ISSN0736-6205, PMID18611170, DOI10.2144/000112900, lire en ligne, consulté le )
Ali Mortazavi, Brian A. Williams, Kenneth McCue et Lorian Schaeffer, « Mapping and quantifying mammalian transcriptomes by RNA-Seq », Nature Methods, vol. 5, , p. 621–628 (ISSN1548-7105, PMID18516045, DOI10.1038/nmeth.1226, lire en ligne, consulté le )
nih.gov
ncbi.nlm.nih.gov
Ryan D. Morin, Matthew Bainbridge, Anthony Fejes, Martin Hirst, Martin Krzywinski, Trevor J. Pugh, Helen McDonald, Richard Varhol, Steven J.M. Jones, and Marco A. Marra., « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, no 1, , p. 81–94 (PMID18611170, DOI10.2144/000112900, lire en ligne)
Chu Y, Corey DR, « RNA sequencing: platform selection, experimental design, and data interpretation », Nucleic Acid Ther, vol. 22, no 4, , p. 271–4 (PMID22830413, PMCID3426205, DOI10.1089/nat.2012.0367)
C. A. Maher, C. Kumar-Sinha, X. Caoet al., « Transcriptome sequencing to detect gene fusions in cancer », Nature, vol. 458, no 7234, , p. 97–101 (PMID19136943, PMCID2725402, DOI10.1038/nature07638)
Ingolia NT, Brar GA, Rouskin S, McGeachy AM, Weissman JS, « The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments », Nat Protoc, vol. 7, no 8, , p. 1534–50 (PMID22836135, PMCID3535016, DOI10.1038/nprot.2012.086)
F. Qian, L. Chung, W. Zheng et . etal, « Identification of Genes Critical for Resistance to Infection by West Nile Virus Using RNA-Seq Analysis », Viruses, vol. 5, no 7, , p. 1664–81 (PMID23881275, DOI10.3390/v5071664)
J. Beane, J. Vick, F. Schembriet al., « Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq », Cancer Prev Res (Phila), vol. 4, no 6, , p. 803–17 (PMID21636547, PMCID3694393, DOI10.1158/1940-6207.CAPR-11-0212)
Donald C. Rio, Manuel Ares, Gregory J. Hannon et Timothy W. Nilsen, « Preparation of cytoplasmic and nuclear RNA from tissue culture cells », Cold Spring Harbor Protocols, vol. 2010, , pdb.prot5441 (ISSN1559-6095, PMID20516179, DOI10.1101/pdb.prot5441, lire en ligne, consulté le )
Ryan Morin, Matthew Bainbridge, Anthony Fejes et Martin Hirst, « Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing », BioTechniques, vol. 45, , p. 81–94 (ISSN0736-6205, PMID18611170, DOI10.2144/000112900, lire en ligne, consulté le )
Ali Mortazavi, Brian A. Williams, Kenneth McCue et Lorian Schaeffer, « Mapping and quantifying mammalian transcriptomes by RNA-Seq », Nature Methods, vol. 5, , p. 621–628 (ISSN1548-7105, PMID18516045, DOI10.1038/nmeth.1226, lire en ligne, consulté le )