Aliñamento de secuencias (Galician Wikipedia)

Analysis of information sources in references of the Wikipedia article "Aliñamento de secuencias" in Galician language version.

refsWebsite

Global rank Galician rank

25nih.gov

4^th place

6^th place

20doi.org

2^nd place

7^th place

7oxfordjournals.org

1,389^th place

239^th place

4web.archive.org

1^st place

2pnas.org

1,293^rd place

271^st place

2elsevier.com

610^th place

214^th place

2archive.org

6^th place

8^th place

1academia.gal

low place

2^nd place

1portaldaspalabras.gal

low place

4^th place

1genome.org

low place

6,911^th place

1sciencemag.org

857^th place

242^nd place

1cornell.edu

332^nd place

317^th place

1ualberta.ca

3,600^th place

4,609^th place

1repec.org

4,270^th place

3,753^rd place

academia.gal

Definicións no Dicionario da Real Academia Galega e no Portal das Palabras para aliñamento.

archive.org

Felsenstein J. (2004). Sinauer Associates: Sunderland, MA, ed. Inferring Phylogenies. ISBN 0-87893-177-5.
Blazewicz J, Bryja M, Figlerowicz M; et al. (June 2009). "Whole genome assembly from 454 sequencing output via modified DNA graph concept". Comput Biol Chem 33 (3): 224–30. PMID 19477687. doi:10.1016/j.compbiolchem.2009.04.005.

cornell.edu

cs.cornell.edu

Barzilay R, Lee L. (2002). "Bootstrapping Lexical Choice via Multiple-Sequence Alignment" (PDF). Proceedings of the Conference on Empirical Methods in Natural Language Processing (EMNLP): 164–171.

doi.org

dx.doi.org

Schneider TD, Stephens RM (1990). "Sequence logos: a new way to display consensus sequences". Nucleic Acids Res 18: 6097–6100. PMID 2172928. doi:10.1093/nar/18.20.6097.
Brudno M, Malde S, Poliakov A, Do CB, Couronne O, Dubchak I, Batzoglou S (2003). "Glocal alignment: finding rearrangements during alignment". Bioinformatics. 19 Suppl 1: i54–62. PMID 12855437. doi:10.1093/bioinformatics/btg1005.
Brudno M, Poliakov A, Salamov A, Cooper GM, Sidow A, Rubin EM, Solovyev V, Batzoglou S, Dubchak I (2004). "Automate whole-genome multiple alignment of rat, mouse, and human" (PDF). Genome Research 14: 685–692. doi:10.1101/gr.2067704.
Lipman DJ, Altschul SF, Kececioglu JD (1989). "A tool for multiple sequence alignment". Proc Natl Acad Sci U S A 86: 4412–5. PMID 2734293. doi:10.1073/pnas.86.12.4412. Arquivado dende o orixinal o 10 de setembro de 2017. Consultado o 29 de marzo de 2014.
Higgins DG, Sharp PM (1988). "CLUSTAL: a package for performing multiple sequence alignment on a microcomputer". Gene 73 (1): 237–44. PMID 3243435. doi:10.1016/0378-1119(88)90330-7.
Thompson JD, Higgins DG, Gibson TJ. (1994). "CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice". Nucleic Acids Res 22: 4673–80. PMID 7984417. doi:10.1093/nar/22.22.4673.
Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD. (2003). "Multiple sequence alignment with the Clustal series of programs". Nucleic Acids Res 31: 3497–500. PMID 12824352. doi:10.1093/nar/gkg500.
Notredame C, Higgins DG, Heringa J. (2000). "T-Coffee: A novel method for fast and accurate multiple sequence alignment". J Mol Biol 302 (1): 205–17. PMID 10964570. doi:10.1006/jmbi.2000.4042.
Hirosawa M, Totoki Y, Hoshida M, Ishikawa M. (1995). "Comprehensive study on iterative algorithms of multiple sequence alignment". Comput Appl Biosci 11: 13–8. PMID 7796270. doi:10.1093/bioinformatics/11.1.13.
Karplus K, Barrett C, Hughey R. (1998). "Hidden Márkov models for detecting remote protein homologies". Bioinformatics 14 (10): 846–856. PMID 9927713. doi:10.1093/bioinformatics/14.10.846.
Zhang Y, Skolnick J. (2005). "The protein structure prediction problem could be solved using the current PDB library". Proc Natl Acad Sci U S A 102: 1029–34. PMID 15653774. doi:10.1073/pnas.0407152101. Arquivado dende o orixinal o 08 de marzo de 2020. Consultado o 29 de marzo de 2014.
Orengo CA, Michie AD, Jones S, Jones DT, Swindells MB, Thornton JM (1997). "CATH--a hierarchic classification of protein domain structures". Structure 5: 1093–108. PMID 9309224. doi:10.1016/S0969-2126(97)00260-8.
Shindyalov IN, Bourne PE. (1998). "Protein structure alignment by incremental combinatorial extension (CE) of the optimal path". Protein Eng 11: 739–47. PMID 9796821. doi:10.1093/protein/11.9.739.
Prinzie A., D. Van den Poel (2006). "Incorporating sequential information into traditional classification models by using an element/position-sensitive SAM". Decision Support Systems 42 (2): 508–526. doi:10.1016/j.dss.2005.02.004. Ver tamén a publicación de Prinzie e Van den Poel "Predicting home-appliance acquisition sequences: Márkov/Márkov for Discrimination and survival analysis for modeling sequential information in NPTB models". Decision Support Systems 44 (1): 28–45. 2007. doi:10.1016/j.dss.2007.02.008.
Kim N, Lee C (2008). "Bioinformatics detection of alternative splicing". Methods Mol. Biol. Methods in Molecular Biology™ 452: 179–97. ISBN 978-1-58829-707-5. PMID 18566765. doi:10.1007/978-1-60327-159-2_9.
Li JB, Levanon EY, Yoon JK; et al. (May 2009). "Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing". Science 324 (5931): 1210–3. PMID 19478186. doi:10.1126/science.1170995.
Blazewicz J, Bryja M, Figlerowicz M; et al. (June 2009). "Whole genome assembly from 454 sequencing output via modified DNA graph concept". Comput Biol Chem 33 (3): 224–30. PMID 19477687. doi:10.1016/j.compbiolchem.2009.04.005.
Duran C, Appleby N, Vardy M, Imelfort M, Edwards D, Batley J (May 2009). "Single nucleotide polymorphism discovery in barley using autoSNPdb". Plant Biotechnol. J. 7 (4): 326–33. PMID 19386041. doi:10.1111/j.1467-7652.2009.00407.x.
Thompson JD, Plewniak F, Poch O (1999). "BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs". Bioinformatics 15: 87–8. PMID 10068696. doi:10.1093/bioinformatics/15.1.87.
Thompson JD, Plewniak F, Poch O. (1999). "A comprehensive comparison of multiple sequence alignment programs". Nucleic Acids Res 27: 2682–90. PMID 10373585. doi:10.1093/nar/27.13.2682.

elsevier.com

linkinghub.elsevier.com

Higgins DG, Sharp PM (1988). "CLUSTAL: a package for performing multiple sequence alignment on a microcomputer". Gene 73 (1): 237–44. PMID 3243435. doi:10.1016/0378-1119(88)90330-7.
Notredame C, Higgins DG, Heringa J. (2000). "T-Coffee: A novel method for fast and accurate multiple sequence alignment". J Mol Biol 302 (1): 205–17. PMID 10964570. doi:10.1006/jmbi.2000.4042.

genome.org

Brudno M, Poliakov A, Salamov A, Cooper GM, Sidow A, Rubin EM, Solovyev V, Batzoglou S, Dubchak I (2004). "Automate whole-genome multiple alignment of rat, mouse, and human" (PDF). Genome Research 14: 685–692. doi:10.1101/gr.2067704.

nih.gov

ncbi.nlm.nih.gov

Schneider TD, Stephens RM (1990). "Sequence logos: a new way to display consensus sequences". Nucleic Acids Res 18: 6097–6100. PMID 2172928. doi:10.1093/nar/18.20.6097.
Brudno M, Malde S, Poliakov A, Do CB, Couronne O, Dubchak I, Batzoglou S (2003). "Glocal alignment: finding rearrangements during alignment". Bioinformatics. 19 Suppl 1: i54–62. PMID 12855437. doi:10.1093/bioinformatics/btg1005.
Wang L, Jiang T. (1994). "On the complexity of multiple sequence alignment". J Comput Biol 1: 337–48. PMID 8790475.
Lipman DJ, Altschul SF, Kececioglu JD (1989). "A tool for multiple sequence alignment". Proc Natl Acad Sci U S A 86: 4412–5. PMID 2734293. doi:10.1073/pnas.86.12.4412. Arquivado dende o orixinal o 10 de setembro de 2017. Consultado o 29 de marzo de 2014.
Higgins DG, Sharp PM (1988). "CLUSTAL: a package for performing multiple sequence alignment on a microcomputer". Gene 73 (1): 237–44. PMID 3243435. doi:10.1016/0378-1119(88)90330-7.
Thompson JD, Higgins DG, Gibson TJ. (1994). "CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice". Nucleic Acids Res 22: 4673–80. PMID 7984417. doi:10.1093/nar/22.22.4673.
Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD. (2003). "Multiple sequence alignment with the Clustal series of programs". Nucleic Acids Res 31: 3497–500. PMID 12824352. doi:10.1093/nar/gkg500.
Notredame C, Higgins DG, Heringa J. (2000). "T-Coffee: A novel method for fast and accurate multiple sequence alignment". J Mol Biol 302 (1): 205–17. PMID 10964570. doi:10.1006/jmbi.2000.4042.
Hirosawa M, Totoki Y, Hoshida M, Ishikawa M. (1995). "Comprehensive study on iterative algorithms of multiple sequence alignment". Comput Appl Biosci 11: 13–8. PMID 7796270. doi:10.1093/bioinformatics/11.1.13.
Karplus K, Barrett C, Hughey R. (1998). "Hidden Márkov models for detecting remote protein homologies". Bioinformatics 14 (10): 846–856. PMID 9927713. doi:10.1093/bioinformatics/14.10.846.
Chothia C, Lesk AM. (1986). "The relation between the divergence of sequence and structure in proteins". EMBO J 5 (4): 823–6. PMID 3709526.
Zhang Y, Skolnick J. (2005). "The protein structure prediction problem could be solved using the current PDB library". Proc Natl Acad Sci U S A 102: 1029–34. PMID 15653774. doi:10.1073/pnas.0407152101. Arquivado dende o orixinal o 08 de marzo de 2020. Consultado o 29 de marzo de 2014.
Holm L, Sander C (1996). "Mapping the protein universe". Science 273: 595–603. PMID 8662544.
Taylor WR, Flores TP, Orengo CA. (1994). "Multiple protein structure alignment". Protein Sci 3: 1858–70. PMID 7849601.
Orengo CA, Michie AD, Jones S, Jones DT, Swindells MB, Thornton JM (1997). "CATH--a hierarchic classification of protein domain structures". Structure 5: 1093–108. PMID 9309224. doi:10.1016/S0969-2126(97)00260-8.
Shindyalov IN, Bourne PE. (1998). "Protein structure alignment by incremental combinatorial extension (CE) of the optimal path". Protein Eng 11: 739–47. PMID 9796821. doi:10.1093/protein/11.9.739.
Kim N, Lee C (2008). "Bioinformatics detection of alternative splicing". Methods Mol. Biol. Methods in Molecular Biology™ 452: 179–97. ISBN 978-1-58829-707-5. PMID 18566765. doi:10.1007/978-1-60327-159-2_9.
Li JB, Levanon EY, Yoon JK; et al. (May 2009). "Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing". Science 324 (5931): 1210–3. PMID 19478186. doi:10.1126/science.1170995.
Blazewicz J, Bryja M, Figlerowicz M; et al. (June 2009). "Whole genome assembly from 454 sequencing output via modified DNA graph concept". Comput Biol Chem 33 (3): 224–30. PMID 19477687. doi:10.1016/j.compbiolchem.2009.04.005.
Duran C, Appleby N, Vardy M, Imelfort M, Edwards D, Batley J (May 2009). "Single nucleotide polymorphism discovery in barley using autoSNPdb". Plant Biotechnol. J. 7 (4): 326–33. PMID 19386041. doi:10.1111/j.1467-7652.2009.00407.x.
Thompson JD, Plewniak F, Poch O (1999). "BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs". Bioinformatics 15: 87–8. PMID 10068696. doi:10.1093/bioinformatics/15.1.87.
Thompson JD, Plewniak F, Poch O. (1999). "A comprehensive comparison of multiple sequence alignment programs". Nucleic Acids Res 27: 2682–90. PMID 10373585. doi:10.1093/nar/27.13.2682.

pubmedcentral.nih.gov

Schneider TD, Stephens RM (1990). "Sequence logos: a new way to display consensus sequences". Nucleic Acids Res 18: 6097–6100. PMID 2172928. doi:10.1093/nar/18.20.6097.
Thompson JD, Higgins DG, Gibson TJ. (1994). "CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice". Nucleic Acids Res 22: 4673–80. PMID 7984417. doi:10.1093/nar/22.22.4673.
Chothia C, Lesk AM. (1986). "The relation between the divergence of sequence and structure in proteins". EMBO J 5 (4): 823–6. PMID 3709526.

oxfordjournals.org

bioinformatics.oxfordjournals.org

Brudno M, Malde S, Poliakov A, Do CB, Couronne O, Dubchak I, Batzoglou S (2003). "Glocal alignment: finding rearrangements during alignment". Bioinformatics. 19 Suppl 1: i54–62. PMID 12855437. doi:10.1093/bioinformatics/btg1005.
Hirosawa M, Totoki Y, Hoshida M, Ishikawa M. (1995). "Comprehensive study on iterative algorithms of multiple sequence alignment". Comput Appl Biosci 11: 13–8. PMID 7796270. doi:10.1093/bioinformatics/11.1.13.
Karplus K, Barrett C, Hughey R. (1998). "Hidden Márkov models for detecting remote protein homologies". Bioinformatics 14 (10): 846–856. PMID 9927713. doi:10.1093/bioinformatics/14.10.846.
Thompson JD, Plewniak F, Poch O (1999). "BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs". Bioinformatics 15: 87–8. PMID 10068696. doi:10.1093/bioinformatics/15.1.87.

nar.oxfordjournals.org

Chenna R, Sugawara H, Koike T, Lopez R, Gibson TJ, Higgins DG, Thompson JD. (2003). "Multiple sequence alignment with the Clustal series of programs". Nucleic Acids Res 31: 3497–500. PMID 12824352. doi:10.1093/nar/gkg500.
Thompson JD, Plewniak F, Poch O. (1999). "A comprehensive comparison of multiple sequence alignment programs". Nucleic Acids Res 27: 2682–90. PMID 10373585. doi:10.1093/nar/27.13.2682.

peds.oxfordjournals.org

Shindyalov IN, Bourne PE. (1998). "Protein structure alignment by incremental combinatorial extension (CE) of the optimal path". Protein Eng 11: 739–47. PMID 9796821. doi:10.1093/protein/11.9.739.

pnas.org

Lipman DJ, Altschul SF, Kececioglu JD (1989). "A tool for multiple sequence alignment". Proc Natl Acad Sci U S A 86: 4412–5. PMID 2734293. doi:10.1073/pnas.86.12.4412. Arquivado dende o orixinal o 10 de setembro de 2017. Consultado o 29 de marzo de 2014.
Zhang Y, Skolnick J. (2005). "The protein structure prediction problem could be solved using the current PDB library". Proc Natl Acad Sci U S A 102: 1029–34. PMID 15653774. doi:10.1073/pnas.0407152101. Arquivado dende o orixinal o 08 de marzo de 2020. Consultado o 29 de marzo de 2014.

portaldaspalabras.gal

Definicións no Dicionario da Real Academia Galega e no Portal das Palabras para aliñamento.

repec.org

econpapers.repec.org

Prinzie A., D. Van den Poel (2006). "Incorporating sequential information into traditional classification models by using an element/position-sensitive SAM". Decision Support Systems 42 (2): 508–526. doi:10.1016/j.dss.2005.02.004. Ver tamén a publicación de Prinzie e Van den Poel "Predicting home-appliance acquisition sequences: Márkov/Márkov for Discrimination and survival analysis for modeling sequential information in NPTB models". Decision Support Systems 44 (1): 28–45. 2007. doi:10.1016/j.dss.2007.02.008.

sciencemag.org

Holm L, Sander C (1996). "Mapping the protein universe". Science 273: 595–603. PMID 8662544.

ualberta.ca

cs.ualberta.ca

Kondrak, Grzegorz (2002). University of Toronto, Ontario, ed. "Algorithms for Language Reconstruction" (PDF). Arquivado dende o orixinal (PDF) o 17-12-2008. Consultado o 21-1-2007.

web.archive.org

Lipman DJ, Altschul SF, Kececioglu JD (1989). "A tool for multiple sequence alignment". Proc Natl Acad Sci U S A 86: 4412–5. PMID 2734293. doi:10.1073/pnas.86.12.4412. Arquivado dende o orixinal o 10 de setembro de 2017. Consultado o 29 de marzo de 2014.
Zhang Y, Skolnick J. (2005). "The protein structure prediction problem could be solved using the current PDB library". Proc Natl Acad Sci U S A 102: 1029–34. PMID 15653774. doi:10.1073/pnas.0407152101. Arquivado dende o orixinal o 08 de marzo de 2020. Consultado o 29 de marzo de 2014.
Taylor WR, Flores TP, Orengo CA. (1994). "Multiple protein structure alignment". Protein Sci 3: 1858–70. PMID 7849601.
Kondrak, Grzegorz (2002). University of Toronto, Ontario, ed. "Algorithms for Language Reconstruction" (PDF). Arquivado dende o orixinal (PDF) o 17-12-2008. Consultado o 21-1-2007.