Pfam (Hungarian Wikipedia)

Analysis of information sources in references of the Wikipedia article "Pfam" in Hungarian language version.

refsWebsite
Global rank Hungarian rank
4th place
11th place
2nd place
8th place
5th place
22nd place
low place
low place
low place
low place
5,849th place
4,703rd place

doi.org

dx.doi.org

  • Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A (2008). „The Pfam protein families database”. Nucleic Acids Res 36 (Database issue), D281–8. o. DOI:10.1093/nar/gkm960. PMID 18039703. PMC 2238907. 
  • Finn, R. D. (2006. január 1.). „Pfam: clans, web tools and services” (Free full text). Nucleic Acids Research 34 (Database issue), D247–D251. o. DOI:10.1093/nar/gkj149. ISSN 0305-1048. PMID 16381856. PMC 1347511. 
  • Bateman, A. (2004). „The Pfam protein families database”. Nucleic Acids Research 32 (Database issue), 138D–1141. o. DOI:10.1093/nar/gkh121. ISSN 0305-1048. PMID 14681378. PMC 308855.  „open access” publikáció – ingyenesen elolvasható
  • Sammut, Stephen (2008). „Pfam 10 years on: 10 000 families and still growing”. Briefings in Bioinformatics 9 (3), 210–219. o. DOI:10.1093/bib/bbn010. PMID 18344544. 
  • Sonnhammer, Erik L. L. (1997). „Pfam: A Comprehensive Database of Protein Domain Families Based on Seed Alignments”. Proteins 28 (3), 405–420. o. DOI:<405::aid-prot10>3.0.co;2-l 10.1002/(sici)1097-0134(199707)28:3<405::aid-prot10>3.0.co;2-l. PMID 9223186. 
  • Xu, Qifang (2012). „Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB”. Bioinformatics 28 (21), 2763–2772. o. DOI:10.1093/bioinformatics/bts533. PMID 22942020. PMC 3476341. 
  • Finn, R. D. (2009). „The Pfam protein families database”. Nucleic Acids Research 38 (Database), D211–D222. o. DOI:10.1093/nar/gkp985. ISSN 0305-1048. PMID 19920124. PMC 2808889. 
  • Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, Eddy SR, Griffiths-Jones S, Howe KL, Marshall M, Sonnhammer EL (2002). „The Pfam protein families database”. Nucleic Acids Res. 30 (1), 276–80. o. DOI:10.1093/nar/30.1.276. PMID 11752314. PMC 99071. 
  • Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell MD, Zhang Q, Chen LX, Brandon RC, Rogers YH, Blazej RG, Champe M, Pfeiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Gabor GL, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Berman BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Chandra I, Cherry JM, Cawley S, Dahlke C, Davenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Mays AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, Ibegwam C, Jalali M, Kalush F, Karpen GH, Ke Z, Kennison JA, Ketchum KA, Kimmel BE, Kodira CD, Kraft C, Kravitz S, Kulp D, Lai Z, Lasko P, Lei Y, Levitsky AA, Li J, Li Z, Liang Y, Lin X, Liu X, Mattei B, McIntosh TC, McLeod MP, McPherson D, Merkulov G, Milshina NV, Mobarry C, Morris J, Moshrefi A, Mount SM, Moy M, Murphy B, Murphy L, Muzny DM, Nelson DL, Nelson DR, Nelson KA, Nixon K, Nusskern DR, Pacleb JM, Palazzolo M, Pittman GS, Pan S, Pollard J, Puri V, Reese MG, Reinert K, Remington K, Saunders RD, Scheeler F, Shen H, Shue BC, Sidén-Kiamos I, Simpson M, Skupski MP, Smith T, Spier E, Spradling AC, Stapleton M, Strong R, Sun E, Svirskas R, Tector C, Turner R, Venter E, Wang AH, Wang X, Wang ZY, Wassarman DA, Weinstock GM, Weissenbach J, Williams SM, WoodageT, Worley KC, Wu D, Yang S, Yao QA, Ye J, Yeh RF, Zaveri JS, Zhan M, Zhang G, Zhao Q, Zheng L, Zheng XH, Zhong FN, Zhong W, Zhou X, Zhu S, Zhu X, Smith HO, Gibbs RA, Myers EW, Rubin GM, Venter JC (2000). „The genome sequence of Drosophila melanogaster”. Science 287 (5461), 2185–95. o. DOI:10.1126/science.287.5461.2185. PMID 10731132. 
  • Lander, Eric S. (2001). „Initial sequencing and analysis of the human genome”. Nature 409 (6822), 860–921. o. DOI:10.1038/35057062. ISSN 0028-0836. PMID 11237011. 
  • Finn, Robert D. (2014). „Pfam: the protein families database”. Nucleic Acids Research 42 (D1), D222–D230. o. DOI:10.1093/nar/gkt1223. ISSN 0305-1048. PMID 24288371. PMC 3965110. 
  • Sonnhammer EL, Eddy SR, Birney E, Bateman A, Durbin R (1998). „Pfam: multiple sequence alignments and HMM-profiles of protein domains”. Nucleic Acids Res. 26 (1), 320–2. o. DOI:10.1093/nar/26.1.320. PMID 9399864. PMC 147209. 
  • Finn, R. D. (2004). „iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions”. Bioinformatics 21 (3), 410–412. o. DOI:10.1093/bioinformatics/bti011. ISSN 1367-4803. PMID 15353450. 
  • Finn, Robert D. (2016). „The Pfam protein families database: towards a more sustainable future”. Nucleic Acids Research 44 (D1), D279–D285. o. DOI:10.1093/nar/gkv1344. ISSN 0305-1048. PMID 26673716. PMC 4702930. 
  • Punta, M. (2011). „The Pfam protein families database”. Nucleic Acids Research 40 (D1), D290–D301. o. DOI:10.1093/nar/gkr1065. ISSN 0305-1048. PMID 22127870. PMC 3245129. 
  • El-Gebali, Sara (2019. január 8.). „The Pfam protein families database in 2019”. Nucleic Acids Research 47 (D1), D427–D432. o. DOI:10.1093/nar/gky995. PMID 30357350. PMC 6324024. 
  • Chothia, Cyrus (1992). „One thousand families for the molecular biologist”. Nature 357 (6379), 543–544. o. DOI:10.1038/357543a0. ISSN 0028-0836. PMID 1608464. 
  • Heger, A. (2005. január 1.). „ADDA: a domain database with global coverage of the protein universe” (Free full text). Nucleic Acids Research 33 (Database issue), D188–D191. o. DOI:10.1093/nar/gki096. ISSN 0305-1048. PMID 15608174. PMC 540050. 

ebi.ac.uk

ftp.ebi.ac.uk

nih.gov

pubmed.ncbi.nlm.nih.gov

  • Finn RD, Tate J, Mistry J, Coggill PC, Sammut SJ, Hotz HR, Ceric G, Forslund K, Eddy SR, Sonnhammer EL, Bateman A (2008). „The Pfam protein families database”. Nucleic Acids Res 36 (Database issue), D281–8. o. DOI:10.1093/nar/gkm960. PMID 18039703. PMC 2238907. 
  • Finn, R. D. (2006. január 1.). „Pfam: clans, web tools and services” (Free full text). Nucleic Acids Research 34 (Database issue), D247–D251. o. DOI:10.1093/nar/gkj149. ISSN 0305-1048. PMID 16381856. PMC 1347511. 
  • Bateman, A. (2004). „The Pfam protein families database”. Nucleic Acids Research 32 (Database issue), 138D–1141. o. DOI:10.1093/nar/gkh121. ISSN 0305-1048. PMID 14681378. PMC 308855.  „open access” publikáció – ingyenesen elolvasható
  • Sammut, Stephen (2008). „Pfam 10 years on: 10 000 families and still growing”. Briefings in Bioinformatics 9 (3), 210–219. o. DOI:10.1093/bib/bbn010. PMID 18344544. 
  • Sonnhammer, Erik L. L. (1997). „Pfam: A Comprehensive Database of Protein Domain Families Based on Seed Alignments”. Proteins 28 (3), 405–420. o. DOI:<405::aid-prot10>3.0.co;2-l 10.1002/(sici)1097-0134(199707)28:3<405::aid-prot10>3.0.co;2-l. PMID 9223186. 
  • Xu, Qifang (2012). „Assignment of protein sequences to existing domain and family classification systems: Pfam and the PDB”. Bioinformatics 28 (21), 2763–2772. o. DOI:10.1093/bioinformatics/bts533. PMID 22942020. PMC 3476341. 
  • Finn, R. D. (2009). „The Pfam protein families database”. Nucleic Acids Research 38 (Database), D211–D222. o. DOI:10.1093/nar/gkp985. ISSN 0305-1048. PMID 19920124. PMC 2808889. 
  • Bateman A, Birney E, Cerruti L, Durbin R, Etwiller L, Eddy SR, Griffiths-Jones S, Howe KL, Marshall M, Sonnhammer EL (2002). „The Pfam protein families database”. Nucleic Acids Res. 30 (1), 276–80. o. DOI:10.1093/nar/30.1.276. PMID 11752314. PMC 99071. 
  • Adams MD, Celniker SE, Holt RA, Evans CA, Gocayne JD, Amanatides PG, Scherer SE, Li PW, Hoskins RA, Galle RF, George RA, Lewis SE, Richards S, Ashburner M, Henderson SN, Sutton GG, Wortman JR, Yandell MD, Zhang Q, Chen LX, Brandon RC, Rogers YH, Blazej RG, Champe M, Pfeiffer BD, Wan KH, Doyle C, Baxter EG, Helt G, Nelson CR, Gabor GL, Abril JF, Agbayani A, An HJ, Andrews-Pfannkoch C, Baldwin D, Ballew RM, Basu A, Baxendale J, Bayraktaroglu L, Beasley EM, Beeson KY, Benos PV, Berman BP, Bhandari D, Bolshakov S, Borkova D, Botchan MR, Bouck J, Brokstein P, Brottier P, Burtis KC, Busam DA, Butler H, Cadieu E, Center A, Chandra I, Cherry JM, Cawley S, Dahlke C, Davenport LB, Davies P, de Pablos B, Delcher A, Deng Z, Mays AD, Dew I, Dietz SM, Dodson K, Doup LE, Downes M, Dugan-Rocha S, Dunkov BC, Dunn P, Durbin KJ, Evangelista CC, Ferraz C, Ferriera S, Fleischmann W, Fosler C, Gabrielian AE, Garg NS, Gelbart WM, Glasser K, Glodek A, Gong F, Gorrell JH, Gu Z, Guan P, Harris M, Harris NL, Harvey D, Heiman TJ, Hernandez JR, Houck J, Hostin D, Houston KA, Howland TJ, Wei MH, Ibegwam C, Jalali M, Kalush F, Karpen GH, Ke Z, Kennison JA, Ketchum KA, Kimmel BE, Kodira CD, Kraft C, Kravitz S, Kulp D, Lai Z, Lasko P, Lei Y, Levitsky AA, Li J, Li Z, Liang Y, Lin X, Liu X, Mattei B, McIntosh TC, McLeod MP, McPherson D, Merkulov G, Milshina NV, Mobarry C, Morris J, Moshrefi A, Mount SM, Moy M, Murphy B, Murphy L, Muzny DM, Nelson DL, Nelson DR, Nelson KA, Nixon K, Nusskern DR, Pacleb JM, Palazzolo M, Pittman GS, Pan S, Pollard J, Puri V, Reese MG, Reinert K, Remington K, Saunders RD, Scheeler F, Shen H, Shue BC, Sidén-Kiamos I, Simpson M, Skupski MP, Smith T, Spier E, Spradling AC, Stapleton M, Strong R, Sun E, Svirskas R, Tector C, Turner R, Venter E, Wang AH, Wang X, Wang ZY, Wassarman DA, Weinstock GM, Weissenbach J, Williams SM, WoodageT, Worley KC, Wu D, Yang S, Yao QA, Ye J, Yeh RF, Zaveri JS, Zhan M, Zhang G, Zhao Q, Zheng L, Zheng XH, Zhong FN, Zhong W, Zhou X, Zhu S, Zhu X, Smith HO, Gibbs RA, Myers EW, Rubin GM, Venter JC (2000). „The genome sequence of Drosophila melanogaster”. Science 287 (5461), 2185–95. o. DOI:10.1126/science.287.5461.2185. PMID 10731132. 
  • Lander, Eric S. (2001). „Initial sequencing and analysis of the human genome”. Nature 409 (6822), 860–921. o. DOI:10.1038/35057062. ISSN 0028-0836. PMID 11237011. 
  • Finn, Robert D. (2014). „Pfam: the protein families database”. Nucleic Acids Research 42 (D1), D222–D230. o. DOI:10.1093/nar/gkt1223. ISSN 0305-1048. PMID 24288371. PMC 3965110. 
  • Sonnhammer EL, Eddy SR, Birney E, Bateman A, Durbin R (1998). „Pfam: multiple sequence alignments and HMM-profiles of protein domains”. Nucleic Acids Res. 26 (1), 320–2. o. DOI:10.1093/nar/26.1.320. PMID 9399864. PMC 147209. 
  • Finn, R. D. (2004). „iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions”. Bioinformatics 21 (3), 410–412. o. DOI:10.1093/bioinformatics/bti011. ISSN 1367-4803. PMID 15353450. 
  • Finn, Robert D. (2016). „The Pfam protein families database: towards a more sustainable future”. Nucleic Acids Research 44 (D1), D279–D285. o. DOI:10.1093/nar/gkv1344. ISSN 0305-1048. PMID 26673716. PMC 4702930. 
  • Punta, M. (2011). „The Pfam protein families database”. Nucleic Acids Research 40 (D1), D290–D301. o. DOI:10.1093/nar/gkr1065. ISSN 0305-1048. PMID 22127870. PMC 3245129. 
  • El-Gebali, Sara (2019. január 8.). „The Pfam protein families database in 2019”. Nucleic Acids Research 47 (D1), D427–D432. o. DOI:10.1093/nar/gky995. PMID 30357350. PMC 6324024. 
  • Chothia, Cyrus (1992). „One thousand families for the molecular biologist”. Nature 357 (6379), 543–544. o. DOI:10.1038/357543a0. ISSN 0028-0836. PMID 1608464. 
  • Heger, A. (2005. január 1.). „ADDA: a domain database with global coverage of the protein universe” (Free full text). Nucleic Acids Research 33 (Database issue), D188–D191. o. DOI:10.1093/nar/gki096. ISSN 0305-1048. PMID 15608174. PMC 540050. 

ncbi.nlm.nih.gov

swmed.edu

prodata.swmed.edu

worldcat.org

xfam.wordpress.com