LIG3 (Japanese Wikipedia)

Analysis of information sources in references of the Wikipedia article "LIG3" in Japanese language version.

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doi.org

“Structure and function of the DNA ligases encoded by the mammalian LIG3 gene”. Gene 531 (2): 150–7. (December 2013). doi:10.1016/j.gene.2013.08.061. PMC 3881560. PMID 24013086.
“Eukaryotic DNA ligases: structural and functional insights”. Annu. Rev. Biochem. 77: 313–38. (2008). doi:10.1146/annurev.biochem.77.061306.123941. PMC 2933818. PMID 18518823.
“DNA ligase III: a spotty presence in eukaryotes, but an essential function where tested”. Cell Cycle 10 (21): 3636–44. (November 2011). doi:10.4161/cc.10.21.18094. PMC 3266004. PMID 22041657.
“Human DNA ligase III recognizes DNA ends by dynamic switching between two DNA-bound states”. Biochemistry 49 (29): 6165–76. (July 2010). doi:10.1021/bi100503w. PMC 2922849. PMID 20518483.
“DNA ligase III is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase. Identification of two functionally distinct DNA binding regions within DNA ligase III”. Journal of Biological Chemistry 274 (31): 21679–87. (July 1999). doi:10.1074/jbc.274.31.21679. PMID 10419478.
“Physical and functional interaction between DNA ligase IIIalpha and poly(ADP-Ribose) polymerase 1 in DNA single-strand break repair”. Molecular and Cellular Biology 23 (16): 5919–27. (August 2003). doi:10.1128/MCB.23.16.5919-5927.2003. PMC 166336. PMID 12897160.
“The DNA ligase III zinc finger stimulates binding to DNA secondary structure and promotes end joining”. Nucleic Acids Res. 28 (18): 3558–63. (September 2000). doi:10.1093/nar/28.18.3558. PMC 110727. PMID 10982876.
“Two DNA-binding and nick recognition modules in human DNA ligase III”. Journal of Biological Chemistry 283 (16): 10764–72. (April 2008). doi:10.1074/jbc.M708175200. PMC 2447648. PMID 18238776.
“Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase”. Journal of Biological Chemistry 275 (34): 26196–205. (August 2000). doi:10.1074/jbc.M000491200. PMID 10854421.
“The human DNA ligase III gene encodes nuclear and mitochondrial proteins”. Molecular and Cellular Biology 19 (5): 3869–76. (May 1999). doi:10.1128/MCB.19.5.3869. PMC 84244. PMID 10207110.
“An alternative splicing event which occurs in mouse pachytene spermatocytes generates a form of DNA ligase III with distinct biochemical properties that may function in meiotic recombination”. Molecular and Cellular Biology 17 (2): 989–98. (February 1997). doi:10.1128/MCB.17.2.989. PMC 231824. PMID 9001252.
“Molecular cloning and expression of human cDNAs encoding a novel DNA ligase IV and DNA ligase III, an enzyme active in DNA repair and recombination”. Molecular and Cellular Biology 15 (6): 3206–16. (June 1995). doi:10.1128/mcb.15.6.3206. PMC 230553. PMID 7760816.
“Mammalian DNA ligase III: molecular cloning, chromosomal localization, and expression in spermatocytes undergoing meiotic recombination”. Molecular and Cellular Biology 15 (10): 5412–22. (October 1995). doi:10.1128/MCB.15.10.5412. PMC 230791. PMID 7565692.
“An interaction between the mammalian DNA repair protein XRCC1 and DNA ligase III”. Molecular and Cellular Biology 14 (1): 68–76. (January 1994). doi:10.1128/MCB.14.1.68. PMC 358357. PMID 8264637.
“Characterization of the XRCC1-DNA ligase III complex in vitro and its absence from mutant hamster cells”. Nucleic Acids Res. 23 (23): 4836–43. (December 1995). doi:10.1093/nar/23.23.4836. PMC 307472. PMID 8532526.
“XRCC1 protein interacts with one of two distinct forms of DNA ligase III”. Biochemistry 36 (17): 5207–11. (April 1997). doi:10.1021/bi962281m. PMID 9136882.
“Mitochondrial DNA ligase III function is independent of Xrcc1”. Nucleic Acids Res. 28 (20): 3880–6. (October 2000). doi:10.1093/nar/28.20.3880. PMC 110795. PMID 11024166.
“XRCC1 phosphorylation by CK2 is required for its stability and efficient DNA repair”. DNA Repair (Amst.) 9 (7): 835–41. (July 2010). doi:10.1016/j.dnarep.2010.04.008. PMID 20471329.
“DNA ligase III is critical for mtDNA integrity but not Xrcc1-mediated nuclear DNA repair”. Nature 471 (7337): 240–4. (March 2011). doi:10.1038/nature09773. PMC 3079429. PMID 21390131.
“Antisense-mediated decrease in DNA ligase III expression results in reduced mitochondrial DNA integrity”. Nucleic Acids Res. 29 (3): 668–76. (February 2001). doi:10.1093/nar/29.3.668. PMC 30390. PMID 11160888.
“Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair”. Nature 471 (7337): 245–8. (March 2011). doi:10.1038/nature09794. PMC 3261757. PMID 21390132.
Shokolenko, IN; Fayzulin, RZ; Katyal, S; McKinnon, PJ; Alexeyev, MF (Sep 13, 2013). “Mitochondrial DNA ligase is dispensable for the viability of cultured cells but essential for mtDNA maintenance”. Journal of Biological Chemistry 288 (37): 26594–605. doi:10.1074/jbc.M113.472977. PMC 3772206. PMID 23884459.
“Functional redundancy between DNA ligases I and III in DNA replication in vertebrate cells”. Nucleic Acids Research 40 (6): 2599–610. (March 2012). doi:10.1093/nar/gkr1024. PMC 3315315. PMID 22127868.
“Partial complementation of a DNA ligase I deficiency by DNA ligase III and its impact on cell survival and telomere stability in mammalian cells”. Cellular and Molecular Life Sciences 69 (17): 2933–49. (September 2012). doi:10.1007/s00018-012-0975-8. PMC 3417097. PMID 22460582.
“Involvement of XRCC1 and DNA ligase III gene products in DNA base excision repair”. Journal of Biological Chemistry 272 (38): 23970–5. (September 1997). doi:10.1074/jbc.272.38.23970. PMID 9295348.
“Translocation of XRCC1 and DNA ligase III-alpha from centrosomes to chromosomes in response to DNA damage in mitotic human cells”. Nucleic Acids Res. 33 (1): 422–9. (2005). doi:10.1093/nar/gki190. PMC 546168. PMID 15653642.
“Reconstitution of DNA base excision-repair with purified human proteins: interaction between DNA polymerase beta and the XRCC1 protein”. EMBO Journal 15 (23): 6662–70. (December 1996). doi:10.1002/j.1460-2075.1996.tb01056.x. PMC 452490. PMID 8978692.
“Sealing of chromosomal DNA nicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner”. Molecular Cell 27 (2): 311–23. (July 2007). doi:10.1016/j.molcel.2007.06.014. PMID 17643379.
Lieber MR (2010). “The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway”. Annu. Rev. Biochem. 79: 181–211. doi:10.1146/annurev.biochem.052308.093131. PMC 3079308. PMID 20192759.
“DNA ligase III as a candidate component of backup pathways of nonhomologous end joining”. Cancer Res. 65 (10): 4020–30. (May 2005). doi:10.1158/0008-5472.CAN-04-3055. PMID 15899791.
Haber, James E, ed (June 2011). “DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation”. PLOS Genet. 7 (6): e1002080. doi:10.1371/journal.pgen.1002080. PMC 3107202. PMID 21655080.
“Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1)”. Proceedings of the National Academy of Sciences, USA 109 (7): 2473–8. (February 2012). doi:10.1073/pnas.1121470109. PMC 3289296. PMID 22308491.
“Analysis of DNA ligase IV mutations found in LIG4 syndrome patients: the impact of two linked polymorphisms”. Human Molecular Genetics 13 (20): 2369–76. (October 2004). doi:10.1093/hmg/ddh274. PMID 15333585.
“DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency”. Molecular Cell 8 (6): 1175–85. (December 2001). doi:10.1016/S1097-2765(01)00408-7. PMID 11779494.
“Identification of a defect in DNA ligase IV in a radiosensitive leukaemia patient”. Curr. Biol. 9 (13): 699–702. (July 1999). doi:10.1016/S0960-9822(99)80311-X. PMID 10395545.
“Mutations in the DNA ligase I gene of an individual with immunodeficiencies and cellular hypersensitivity to DNA-damaging agents”. Cell 69 (3): 495–503. (May 1992). doi:10.1016/0092-8674(92)90450-Q. PMID 1581963.
“Rational design of human DNA ligase inhibitors that target cellular DNA replication and repair”. Cancer Res. 68 (9): 3169–77. (May 2008). doi:10.1158/0008-5472.CAN-07-6636. PMC 2734474. PMID 18451142.
“Targeting abnormal DNA repair in therapy-resistant breast cancers”. Molecular Cancer Research 10 (1): 96–107. (2012). doi:10.1158/1541-7786.MCR-11-0255. PMC 3319138. PMID 22112941.
“Targeting abnormal DNA double-strand break repair in tyrosine kinase inhibitor-resistant chronic myeloid leukemias”. Oncogene 32 (14): 1784–93. (April 2013). doi:10.1038/onc.2012.203. PMC 3752989. PMID 22641215.
“Up-regulation of WRN and DNA ligase III-alpha in chronic myeloid leukemia: consequences for the repair of DNA double-strand breaks”. Blood 112 (4): 1413–23. (August 2008). doi:10.1182/blood-2007-07-104257. PMC 2967309. PMID 18524993.
“Homology and enzymatic requirements of microhomology-dependent alternative end joining”. Cell Death Dis 6 (3): e1697. (2015). doi:10.1038/cddis.2015.58. PMC 4385936. PMID 25789972.
“Deregulation of DNA double-strand break repair in multiple myeloma: implications for genome stability”. PLOS ONE 10 (3): e0121581. (2015). doi:10.1371/journal.pone.0121581. PMC 4366222. PMID 25790254.
“The neurodegenerative disease protein aprataxin resolves abortive DNA ligation intermediates”. Nature 443 (7112): 713–6. (October 2006). doi:10.1038/nature05164. PMID 16964241.
“Early-onset ataxia with ocular motor apraxia and hypoalbuminemia is caused by mutations in a new HIT superfamily gene”. Nature Genetics 29 (2): 184–8. (October 2001). doi:10.1038/ng1001-184. PMID 11586299.
“The gene mutated in ataxia-ocular apraxia 1 encodes the new HIT/Zn-finger protein aprataxin”. Nature Genetics 29 (2): 189–93. (October 2001). doi:10.1038/ng1001-189. PMID 11586300.
“Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1”. Nature 434 (7029): 108–13. (March 2005). doi:10.1038/nature03314. PMID 15744309.
“Mutations in PNKP cause microcephaly, seizures and defects in DNA repair”. Nature Genetics 42 (3): 245–9. (March 2010). doi:10.1038/ng.526. PMC 2835984. PMID 20118933.

ensembl.org

May2017.archive.ensembl.org

GRCh38: Ensembl release 89: ENSG00000005156 - Ensembl, May 2017
GRCm38: Ensembl release 89: ENSMUSG00000020697 - Ensembl, May 2017

nih.gov

pubmed.ncbi.nlm.nih.gov

“Structure and function of the DNA ligases encoded by the mammalian LIG3 gene”. Gene 531 (2): 150–7. (December 2013). doi:10.1016/j.gene.2013.08.061. PMC 3881560. PMID 24013086.
“Eukaryotic DNA ligases: structural and functional insights”. Annu. Rev. Biochem. 77: 313–38. (2008). doi:10.1146/annurev.biochem.77.061306.123941. PMC 2933818. PMID 18518823.
“DNA ligase III: a spotty presence in eukaryotes, but an essential function where tested”. Cell Cycle 10 (21): 3636–44. (November 2011). doi:10.4161/cc.10.21.18094. PMC 3266004. PMID 22041657.
“Human DNA ligase III recognizes DNA ends by dynamic switching between two DNA-bound states”. Biochemistry 49 (29): 6165–76. (July 2010). doi:10.1021/bi100503w. PMC 2922849. PMID 20518483.
“DNA ligase III is recruited to DNA strand breaks by a zinc finger motif homologous to that of poly(ADP-ribose) polymerase. Identification of two functionally distinct DNA binding regions within DNA ligase III”. Journal of Biological Chemistry 274 (31): 21679–87. (July 1999). doi:10.1074/jbc.274.31.21679. PMID 10419478.
“Physical and functional interaction between DNA ligase IIIalpha and poly(ADP-Ribose) polymerase 1 in DNA single-strand break repair”. Molecular and Cellular Biology 23 (16): 5919–27. (August 2003). doi:10.1128/MCB.23.16.5919-5927.2003. PMC 166336. PMID 12897160.
“The DNA ligase III zinc finger stimulates binding to DNA secondary structure and promotes end joining”. Nucleic Acids Res. 28 (18): 3558–63. (September 2000). doi:10.1093/nar/28.18.3558. PMC 110727. PMID 10982876.
“Two DNA-binding and nick recognition modules in human DNA ligase III”. Journal of Biological Chemistry 283 (16): 10764–72. (April 2008). doi:10.1074/jbc.M708175200. PMC 2447648. PMID 18238776.
“Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase”. Journal of Biological Chemistry 275 (34): 26196–205. (August 2000). doi:10.1074/jbc.M000491200. PMID 10854421.
“The human DNA ligase III gene encodes nuclear and mitochondrial proteins”. Molecular and Cellular Biology 19 (5): 3869–76. (May 1999). doi:10.1128/MCB.19.5.3869. PMC 84244. PMID 10207110.
“An alternative splicing event which occurs in mouse pachytene spermatocytes generates a form of DNA ligase III with distinct biochemical properties that may function in meiotic recombination”. Molecular and Cellular Biology 17 (2): 989–98. (February 1997). doi:10.1128/MCB.17.2.989. PMC 231824. PMID 9001252.
“Molecular cloning and expression of human cDNAs encoding a novel DNA ligase IV and DNA ligase III, an enzyme active in DNA repair and recombination”. Molecular and Cellular Biology 15 (6): 3206–16. (June 1995). doi:10.1128/mcb.15.6.3206. PMC 230553. PMID 7760816.
“Mammalian DNA ligase III: molecular cloning, chromosomal localization, and expression in spermatocytes undergoing meiotic recombination”. Molecular and Cellular Biology 15 (10): 5412–22. (October 1995). doi:10.1128/MCB.15.10.5412. PMC 230791. PMID 7565692.
“An interaction between the mammalian DNA repair protein XRCC1 and DNA ligase III”. Molecular and Cellular Biology 14 (1): 68–76. (January 1994). doi:10.1128/MCB.14.1.68. PMC 358357. PMID 8264637.
“Characterization of the XRCC1-DNA ligase III complex in vitro and its absence from mutant hamster cells”. Nucleic Acids Res. 23 (23): 4836–43. (December 1995). doi:10.1093/nar/23.23.4836. PMC 307472. PMID 8532526.
“XRCC1 protein interacts with one of two distinct forms of DNA ligase III”. Biochemistry 36 (17): 5207–11. (April 1997). doi:10.1021/bi962281m. PMID 9136882.
“Mitochondrial DNA ligase III function is independent of Xrcc1”. Nucleic Acids Res. 28 (20): 3880–6. (October 2000). doi:10.1093/nar/28.20.3880. PMC 110795. PMID 11024166.
“XRCC1 phosphorylation by CK2 is required for its stability and efficient DNA repair”. DNA Repair (Amst.) 9 (7): 835–41. (July 2010). doi:10.1016/j.dnarep.2010.04.008. PMID 20471329.
“DNA ligase III is critical for mtDNA integrity but not Xrcc1-mediated nuclear DNA repair”. Nature 471 (7337): 240–4. (March 2011). doi:10.1038/nature09773. PMC 3079429. PMID 21390131.
“Antisense-mediated decrease in DNA ligase III expression results in reduced mitochondrial DNA integrity”. Nucleic Acids Res. 29 (3): 668–76. (February 2001). doi:10.1093/nar/29.3.668. PMC 30390. PMID 11160888.
“Crucial role for DNA ligase III in mitochondria but not in Xrcc1-dependent repair”. Nature 471 (7337): 245–8. (March 2011). doi:10.1038/nature09794. PMC 3261757. PMID 21390132.
Shokolenko, IN; Fayzulin, RZ; Katyal, S; McKinnon, PJ; Alexeyev, MF (Sep 13, 2013). “Mitochondrial DNA ligase is dispensable for the viability of cultured cells but essential for mtDNA maintenance”. Journal of Biological Chemistry 288 (37): 26594–605. doi:10.1074/jbc.M113.472977. PMC 3772206. PMID 23884459.
“Functional redundancy between DNA ligases I and III in DNA replication in vertebrate cells”. Nucleic Acids Research 40 (6): 2599–610. (March 2012). doi:10.1093/nar/gkr1024. PMC 3315315. PMID 22127868.
“Partial complementation of a DNA ligase I deficiency by DNA ligase III and its impact on cell survival and telomere stability in mammalian cells”. Cellular and Molecular Life Sciences 69 (17): 2933–49. (September 2012). doi:10.1007/s00018-012-0975-8. PMC 3417097. PMID 22460582.
“Involvement of XRCC1 and DNA ligase III gene products in DNA base excision repair”. Journal of Biological Chemistry 272 (38): 23970–5. (September 1997). doi:10.1074/jbc.272.38.23970. PMID 9295348.
“Translocation of XRCC1 and DNA ligase III-alpha from centrosomes to chromosomes in response to DNA damage in mitotic human cells”. Nucleic Acids Res. 33 (1): 422–9. (2005). doi:10.1093/nar/gki190. PMC 546168. PMID 15653642.
“Reconstitution of DNA base excision-repair with purified human proteins: interaction between DNA polymerase beta and the XRCC1 protein”. EMBO Journal 15 (23): 6662–70. (December 1996). doi:10.1002/j.1460-2075.1996.tb01056.x. PMC 452490. PMID 8978692.
“Sealing of chromosomal DNA nicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner”. Molecular Cell 27 (2): 311–23. (July 2007). doi:10.1016/j.molcel.2007.06.014. PMID 17643379.
Lieber MR (2010). “The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway”. Annu. Rev. Biochem. 79: 181–211. doi:10.1146/annurev.biochem.052308.093131. PMC 3079308. PMID 20192759.
“DNA ligase III as a candidate component of backup pathways of nonhomologous end joining”. Cancer Res. 65 (10): 4020–30. (May 2005). doi:10.1158/0008-5472.CAN-04-3055. PMID 15899791.
Haber, James E, ed (June 2011). “DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation”. PLOS Genet. 7 (6): e1002080. doi:10.1371/journal.pgen.1002080. PMC 3107202. PMID 21655080.
“Robust chromosomal DNA repair via alternative end-joining in the absence of X-ray repair cross-complementing protein 1 (XRCC1)”. Proceedings of the National Academy of Sciences, USA 109 (7): 2473–8. (February 2012). doi:10.1073/pnas.1121470109. PMC 3289296. PMID 22308491.
“Analysis of DNA ligase IV mutations found in LIG4 syndrome patients: the impact of two linked polymorphisms”. Human Molecular Genetics 13 (20): 2369–76. (October 2004). doi:10.1093/hmg/ddh274. PMID 15333585.
“DNA ligase IV mutations identified in patients exhibiting developmental delay and immunodeficiency”. Molecular Cell 8 (6): 1175–85. (December 2001). doi:10.1016/S1097-2765(01)00408-7. PMID 11779494.
“Identification of a defect in DNA ligase IV in a radiosensitive leukaemia patient”. Curr. Biol. 9 (13): 699–702. (July 1999). doi:10.1016/S0960-9822(99)80311-X. PMID 10395545.
“Mutations in the DNA ligase I gene of an individual with immunodeficiencies and cellular hypersensitivity to DNA-damaging agents”. Cell 69 (3): 495–503. (May 1992). doi:10.1016/0092-8674(92)90450-Q. PMID 1581963.
“Rational design of human DNA ligase inhibitors that target cellular DNA replication and repair”. Cancer Res. 68 (9): 3169–77. (May 2008). doi:10.1158/0008-5472.CAN-07-6636. PMC 2734474. PMID 18451142.
“Targeting abnormal DNA repair in therapy-resistant breast cancers”. Molecular Cancer Research 10 (1): 96–107. (2012). doi:10.1158/1541-7786.MCR-11-0255. PMC 3319138. PMID 22112941.
“Targeting abnormal DNA double-strand break repair in tyrosine kinase inhibitor-resistant chronic myeloid leukemias”. Oncogene 32 (14): 1784–93. (April 2013). doi:10.1038/onc.2012.203. PMC 3752989. PMID 22641215.
“Up-regulation of WRN and DNA ligase III-alpha in chronic myeloid leukemia: consequences for the repair of DNA double-strand breaks”. Blood 112 (4): 1413–23. (August 2008). doi:10.1182/blood-2007-07-104257. PMC 2967309. PMID 18524993.
“Homology and enzymatic requirements of microhomology-dependent alternative end joining”. Cell Death Dis 6 (3): e1697. (2015). doi:10.1038/cddis.2015.58. PMC 4385936. PMID 25789972.
“Deregulation of DNA double-strand break repair in multiple myeloma: implications for genome stability”. PLOS ONE 10 (3): e0121581. (2015). doi:10.1371/journal.pone.0121581. PMC 4366222. PMID 25790254.
“The neurodegenerative disease protein aprataxin resolves abortive DNA ligation intermediates”. Nature 443 (7112): 713–6. (October 2006). doi:10.1038/nature05164. PMID 16964241.
“Early-onset ataxia with ocular motor apraxia and hypoalbuminemia is caused by mutations in a new HIT superfamily gene”. Nature Genetics 29 (2): 184–8. (October 2001). doi:10.1038/ng1001-184. PMID 11586299.
“The gene mutated in ataxia-ocular apraxia 1 encodes the new HIT/Zn-finger protein aprataxin”. Nature Genetics 29 (2): 189–93. (October 2001). doi:10.1038/ng1001-189. PMID 11586300.
“Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1”. Nature 434 (7029): 108–13. (March 2005). doi:10.1038/nature03314. PMID 15744309.
“Mutations in PNKP cause microcephaly, seizures and defects in DNA repair”. Nature Genetics 42 (3): 245–9. (March 2010). doi:10.1038/ng.526. PMC 2835984. PMID 20118933.

ncbi.nlm.nih.gov

sussex.ac.uk

sro.sussex.ac.uk

“Sealing of chromosomal DNA nicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner”. Molecular Cell 27 (2): 311–23. (July 2007). doi:10.1016/j.molcel.2007.06.014. PMID 17643379.

wikipedia.org

en.wikipedia.org

GRCh38: Ensembl release 89: ENSG00000005156 - Ensembl, May 2017
GRCm38: Ensembl release 89: ENSMUSG00000020697 - Ensembl, May 2017