エピトープ (Japanese Wikipedia)

Analysis of information sources in references of the Wikipedia article "エピトープ" in Japanese language version.

refsWebsite

Global rank Japanese rank

27nih.gov

4^th place

24^th place

19doi.org

2^nd place

6^th place

3harvard.edu

18^th place

107^th place

1uri.edu

8,176^th place

low place

1novusbio.com

low place

1thefreedictionary.com

614^th place

2,284^th place

doi.org (Global: 2^nd place; Japanese: 6^th place)

Huang J, Honda W (April 2006). “CED: a conformational epitope database”. BMC Immunology 7: 7. doi:10.1186/1471-2172-7-7. PMC 1513601. PMID 16603068.
Anfinsen CB (July 1973). “Principles that govern the folding of protein chains”. Science 181 (4096): 223–30. Bibcode: 1973Sci...181..223A. doi:10.1126/science.181.4096.223. PMID 4124164.
Bergmann CC, Tong L, Cua R, Sensintaffar J, Stohlman S (August 1994). “Differential effects of flanking residues on presentation of epitopes from chimeric peptides”. Journal of Virology 68 (8): 5306–10. doi:10.1128/JVI.68.8.5306-5310.1994. PMC 236480. PMID 7518534.
Briggs S, Price MR, Tendler SJ (1993). “Fine specificity of antibody recognition of carcinoma-associated epithelial mucins: antibody binding to synthetic peptide epitopes”. European Journal of Cancer 29A (2): 230–7. doi:10.1016/0959-8049(93)90181-E. PMID 7678496.
Craig L, Sanschagrin PC, Rozek A, Lackie S, Kuhn LA, Scott JK (August 1998). “The role of structure in antibody cross-reactivity between peptides and folded proteins”. Journal of Molecular Biology 281 (1): 183–201. doi:10.1006/jmbi.1998.1907. PMID 9680484.
Steers NJ, Currier JR, Jobe O, Tovanabutra S, Ratto-Kim S, Marovich MA, Kim JH, Michael NL, Alving CR, Rao M (June 2014). “Designing the epitope flanking regions for optimal generation of CTL epitopes”. Vaccine 32 (28): 3509–16. doi:10.1016/j.vaccine.2014.04.039. PMID 24795226.
Sanchez-Trincado JL, Gomez-Perosanz M, Reche PA (2017-12-28). “Fundamentals and Methods for T- and B-Cell Epitope Prediction”. Journal of Immunology Research 2017: 2680160. doi:10.1155/2017/2680160. PMC 5763123. PMID 29445754.
El-Manzalawy Y, Honavar V (November 2010). “Recent advances in B-cell epitope prediction methods”. Immunome Research 6 Suppl 2 (Suppl 2): S2. doi:10.1186/1745-7580-6-S2-S2. PMC 2981878. PMID 21067544.
Epitope Mapping Protocols. Methods in Molecular Biology™. 524. Totowa, NJ: Humana Press. (2009). doi:10.1007/978-1-59745-450-6. ISBN 978-1-934115-17-6
Koren E, De Groot AS, Jawa V, Beck KD, Boone T, Rivera D, Li L, Mytych D, Koscec M, Weeraratne D, Swanson S, Martin W (July 2007). “Clinical validation of the "in silico" prediction of immunogenicity of a human recombinant therapeutic protein”. Clinical Immunology 124 (1): 26–32. doi:10.1016/j.clim.2007.03.544. PMID 17490912.
De Groot AS, Martin W (May 2009). “Reducing risk, improving outcomes: bioengineering less immunogenic protein therapeutics”. Clinical Immunology 131 (2): 189–201. doi:10.1016/j.clim.2009.01.009. PMID 19269256.
Peters B, Nielsen M, Sette A (April 2020). “T Cell Epitope Predictions”. Annual Review of Immunology 38 (1): 123–145. doi:10.1146/annurev-immunol-082119-124838. PMID 32045313.
Potocnakova L, Bhide M, Pulzova LB (2016). “An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction”. Journal of Immunology Research 2016: 6760830. doi:10.1155/2016/6760830. PMC 5227168. PMID 28127568.
Davidson E, Doranz BJ (September 2014). “A high-throughput shotgun mutagenesis approach to mapping B-cell antibody epitopes”. Immunology 143 (1): 13–20. doi:10.1111/imm.12323. PMC 4137951. PMID 24854488.
Zakeri B, Fierer JO, Celik E, Chittock EC, Schwarz-Linek U, Moy VT, Howarth M (March 2012). “Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin”. Proceedings of the National Academy of Sciences of the United States of America 109 (12): E690-7. Bibcode: 2012PNAS..109E.690Z. doi:10.1073/pnas.1115485109. PMC 3311370. PMID 22366317.
Correia BE, Bates JT, Loomis RJ, Baneyx G, Carrico C, Jardine JG, Rupert P, Correnti C, Kalyuzhniy O, Vittal V, Connell MJ, Stevens E, Schroeter A, Chen M, Macpherson S, Serra AM, Adachi Y, Holmes MA, Li Y, Klevit RE, Graham BS, Wyatt RT, Baker D, Strong RK, Crowe JE, Johnson PR, Schief WR (March 2014). “Proof of principle for epitope-focused vaccine design”. Nature 507 (7491): 201–6. Bibcode: 2014Natur.507..201C. doi:10.1038/nature12966. PMC 4260937. PMID 24499818.
McBurney SP, Sunshine JE, Gabriel S, Huynh JP, Sutton WF, Fuller DH, Haigwood NL, Messer WB (June 2016). “Evaluation of protection induced by a dengue virus serotype 2 envelope domain III protein scaffold/DNA vaccine in non-human primates”. Vaccine 34 (30): 3500–7. doi:10.1016/j.vaccine.2016.03.108. PMC 4959041. PMID 27085173.
Parvizpour S, Pourseif MM, Razmara J, Rafi MA, Omidi Y (June 2020). “Epitope-based vaccine design: a comprehensive overview of bioinformatics approaches”. Drug Discovery Today 25 (6): 1034–1042. doi:10.1016/j.drudis.2020.03.006. PMID 32205198.
Hans-Werner V (2005). “Neoantigen-Forming Chemicals”. Encyclopedic Reference of Immunotoxicology. p. 475. doi:10.1007/3-540-27806-0_1063. ISBN 978-3-540-44172-4

harvard.edu (Global: 18^th place; Japanese: 107^th place)

ui.adsabs.harvard.edu

Anfinsen CB (July 1973). “Principles that govern the folding of protein chains”. Science 181 (4096): 223–30. Bibcode: 1973Sci...181..223A. doi:10.1126/science.181.4096.223. PMID 4124164.
Zakeri B, Fierer JO, Celik E, Chittock EC, Schwarz-Linek U, Moy VT, Howarth M (March 2012). “Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin”. Proceedings of the National Academy of Sciences of the United States of America 109 (12): E690-7. Bibcode: 2012PNAS..109E.690Z. doi:10.1073/pnas.1115485109. PMC 3311370. PMID 22366317.
Correia BE, Bates JT, Loomis RJ, Baneyx G, Carrico C, Jardine JG, Rupert P, Correnti C, Kalyuzhniy O, Vittal V, Connell MJ, Stevens E, Schroeter A, Chen M, Macpherson S, Serra AM, Adachi Y, Holmes MA, Li Y, Klevit RE, Graham BS, Wyatt RT, Baker D, Strong RK, Crowe JE, Johnson PR, Schief WR (March 2014). “Proof of principle for epitope-focused vaccine design”. Nature 507 (7491): 201–6. Bibcode: 2014Natur.507..201C. doi:10.1038/nature12966. PMC 4260937. PMID 24499818.

nih.gov (Global: 4^th place; Japanese: 24^th place)

pubmed.ncbi.nlm.nih.gov

Huang J, Honda W (April 2006). “CED: a conformational epitope database”. BMC Immunology 7: 7. doi:10.1186/1471-2172-7-7. PMC 1513601. PMID 16603068.
Anfinsen CB (July 1973). “Principles that govern the folding of protein chains”. Science 181 (4096): 223–30. Bibcode: 1973Sci...181..223A. doi:10.1126/science.181.4096.223. PMID 4124164.
Bergmann CC, Tong L, Cua R, Sensintaffar J, Stohlman S (August 1994). “Differential effects of flanking residues on presentation of epitopes from chimeric peptides”. Journal of Virology 68 (8): 5306–10. doi:10.1128/JVI.68.8.5306-5310.1994. PMC 236480. PMID 7518534.
Bergmann CC, Yao Q, Ho CK, Buckwold SL (October 1996). “Flanking residues alter antigenicity and immunogenicity of multi-unit CTL epitopes”. Journal of Immunology 157 (8): 3242–9. PMID 8871618.
Briggs S, Price MR, Tendler SJ (1993). “Fine specificity of antibody recognition of carcinoma-associated epithelial mucins: antibody binding to synthetic peptide epitopes”. European Journal of Cancer 29A (2): 230–7. doi:10.1016/0959-8049(93)90181-E. PMID 7678496.
Craig L, Sanschagrin PC, Rozek A, Lackie S, Kuhn LA, Scott JK (August 1998). “The role of structure in antibody cross-reactivity between peptides and folded proteins”. Journal of Molecular Biology 281 (1): 183–201. doi:10.1006/jmbi.1998.1907. PMID 9680484.
Steers NJ, Currier JR, Jobe O, Tovanabutra S, Ratto-Kim S, Marovich MA, Kim JH, Michael NL, Alving CR, Rao M (June 2014). “Designing the epitope flanking regions for optimal generation of CTL epitopes”. Vaccine 32 (28): 3509–16. doi:10.1016/j.vaccine.2014.04.039. PMID 24795226.
Sanchez-Trincado JL, Gomez-Perosanz M, Reche PA (2017-12-28). “Fundamentals and Methods for T- and B-Cell Epitope Prediction”. Journal of Immunology Research 2017: 2680160. doi:10.1155/2017/2680160. PMC 5763123. PMID 29445754.
El-Manzalawy Y, Honavar V (November 2010). “Recent advances in B-cell epitope prediction methods”. Immunome Research 6 Suppl 2 (Suppl 2): S2. doi:10.1186/1745-7580-6-S2-S2. PMC 2981878. PMID 21067544.
Koren E, De Groot AS, Jawa V, Beck KD, Boone T, Rivera D, Li L, Mytych D, Koscec M, Weeraratne D, Swanson S, Martin W (July 2007). “Clinical validation of the "in silico" prediction of immunogenicity of a human recombinant therapeutic protein”. Clinical Immunology 124 (1): 26–32. doi:10.1016/j.clim.2007.03.544. PMID 17490912.
De Groot AS, Martin W (May 2009). “Reducing risk, improving outcomes: bioengineering less immunogenic protein therapeutics”. Clinical Immunology 131 (2): 189–201. doi:10.1016/j.clim.2009.01.009. PMID 19269256.
Peters B, Nielsen M, Sette A (April 2020). “T Cell Epitope Predictions”. Annual Review of Immunology 38 (1): 123–145. doi:10.1146/annurev-immunol-082119-124838. PMID 32045313.
Potocnakova L, Bhide M, Pulzova LB (2016). “An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction”. Journal of Immunology Research 2016: 6760830. doi:10.1155/2016/6760830. PMC 5227168. PMID 28127568.
Davidson E, Doranz BJ (September 2014). “A high-throughput shotgun mutagenesis approach to mapping B-cell antibody epitopes”. Immunology 143 (1): 13–20. doi:10.1111/imm.12323. PMC 4137951. PMID 24854488.
Zakeri B, Fierer JO, Celik E, Chittock EC, Schwarz-Linek U, Moy VT, Howarth M (March 2012). “Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin”. Proceedings of the National Academy of Sciences of the United States of America 109 (12): E690-7. Bibcode: 2012PNAS..109E.690Z. doi:10.1073/pnas.1115485109. PMC 3311370. PMID 22366317.
Correia BE, Bates JT, Loomis RJ, Baneyx G, Carrico C, Jardine JG, Rupert P, Correnti C, Kalyuzhniy O, Vittal V, Connell MJ, Stevens E, Schroeter A, Chen M, Macpherson S, Serra AM, Adachi Y, Holmes MA, Li Y, Klevit RE, Graham BS, Wyatt RT, Baker D, Strong RK, Crowe JE, Johnson PR, Schief WR (March 2014). “Proof of principle for epitope-focused vaccine design”. Nature 507 (7491): 201–6. Bibcode: 2014Natur.507..201C. doi:10.1038/nature12966. PMC 4260937. PMID 24499818.
McBurney SP, Sunshine JE, Gabriel S, Huynh JP, Sutton WF, Fuller DH, Haigwood NL, Messer WB (June 2016). “Evaluation of protection induced by a dengue virus serotype 2 envelope domain III protein scaffold/DNA vaccine in non-human primates”. Vaccine 34 (30): 3500–7. doi:10.1016/j.vaccine.2016.03.108. PMC 4959041. PMID 27085173.
Parvizpour S, Pourseif MM, Razmara J, Rafi MA, Omidi Y (June 2020). “Epitope-based vaccine design: a comprehensive overview of bioinformatics approaches”. Drug Discovery Today 25 (6): 1034–1042. doi:10.1016/j.drudis.2020.03.006. PMID 32205198.

pmc.ncbi.nlm.nih.gov

Huang J, Honda W (April 2006). “CED: a conformational epitope database”. BMC Immunology 7: 7. doi:10.1186/1471-2172-7-7. PMC 1513601. PMID 16603068.
Bergmann CC, Tong L, Cua R, Sensintaffar J, Stohlman S (August 1994). “Differential effects of flanking residues on presentation of epitopes from chimeric peptides”. Journal of Virology 68 (8): 5306–10. doi:10.1128/JVI.68.8.5306-5310.1994. PMC 236480. PMID 7518534.
Sanchez-Trincado JL, Gomez-Perosanz M, Reche PA (2017-12-28). “Fundamentals and Methods for T- and B-Cell Epitope Prediction”. Journal of Immunology Research 2017: 2680160. doi:10.1155/2017/2680160. PMC 5763123. PMID 29445754.
El-Manzalawy Y, Honavar V (November 2010). “Recent advances in B-cell epitope prediction methods”. Immunome Research 6 Suppl 2 (Suppl 2): S2. doi:10.1186/1745-7580-6-S2-S2. PMC 2981878. PMID 21067544.
Potocnakova L, Bhide M, Pulzova LB (2016). “An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction”. Journal of Immunology Research 2016: 6760830. doi:10.1155/2016/6760830. PMC 5227168. PMID 28127568.
Davidson E, Doranz BJ (September 2014). “A high-throughput shotgun mutagenesis approach to mapping B-cell antibody epitopes”. Immunology 143 (1): 13–20. doi:10.1111/imm.12323. PMC 4137951. PMID 24854488.
Zakeri B, Fierer JO, Celik E, Chittock EC, Schwarz-Linek U, Moy VT, Howarth M (March 2012). “Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin”. Proceedings of the National Academy of Sciences of the United States of America 109 (12): E690-7. Bibcode: 2012PNAS..109E.690Z. doi:10.1073/pnas.1115485109. PMC 3311370. PMID 22366317.
Correia BE, Bates JT, Loomis RJ, Baneyx G, Carrico C, Jardine JG, Rupert P, Correnti C, Kalyuzhniy O, Vittal V, Connell MJ, Stevens E, Schroeter A, Chen M, Macpherson S, Serra AM, Adachi Y, Holmes MA, Li Y, Klevit RE, Graham BS, Wyatt RT, Baker D, Strong RK, Crowe JE, Johnson PR, Schief WR (March 2014). “Proof of principle for epitope-focused vaccine design”. Nature 507 (7491): 201–6. Bibcode: 2014Natur.507..201C. doi:10.1038/nature12966. PMC 4260937. PMID 24499818.
McBurney SP, Sunshine JE, Gabriel S, Huynh JP, Sutton WF, Fuller DH, Haigwood NL, Messer WB (June 2016). “Evaluation of protection induced by a dengue virus serotype 2 envelope domain III protein scaffold/DNA vaccine in non-human primates”. Vaccine 34 (30): 3500–7. doi:10.1016/j.vaccine.2016.03.108. PMC 4959041. PMID 27085173.

novusbio.com (Global: low place; Japanese: low place)

Novus, Biologicals. “OLLAS Epitope Tag”. Novus Biologicals. 2011年11月23日閲覧。

thefreedictionary.com (Global: 614^th place; Japanese: 2,284^th place)

medical-dictionary.thefreedictionary.com

Neoantigen. (n.d.) Mosby's Medical Dictionary, 8th edition. (2009). Retrieved February 9, 2015 from Medical Dictionary Online

uri.edu (Global: 8,176^th place; Japanese: low place)

digitalcommons.uri.edu

Koren E, De Groot AS, Jawa V, Beck KD, Boone T, Rivera D, Li L, Mytych D, Koscec M, Weeraratne D, Swanson S, Martin W (July 2007). “Clinical validation of the "in silico" prediction of immunogenicity of a human recombinant therapeutic protein”. Clinical Immunology 124 (1): 26–32. doi:10.1016/j.clim.2007.03.544. PMID 17490912.