オープンリーディングフレーム (Japanese Wikipedia)

Analysis of information sources in references of the Wikipedia article "オープンリーディングフレーム" in Japanese language version.

refsWebsite

Global rank Japanese rank

13nih.gov

4^th place

24^th place

8doi.org

2^nd place

6^th place

6worldcat.org

5^th place

19^th place

1wikipedia.org

low place

1harvard.edu

18^th place

107^th place

1semanticscholar.org

11^th place

1,537^th place

1google.co.in

585^th place

8,482^nd place

1ysu.edu

low place

1bioconductor.org

low place

1oup.com

485^th place

1,439^th place

1github.com

383^rd place

521^st place

bioconductor.org

“ORFik - Open reading frames in genomics”. bioconductor.org. 2021年6月4日閲覧。

doi.org

Sieber, Patricia; Platzer, Matthias; Schuster, Stefan (March 2018). “The Definition of Open Reading Frame Revisited”. Trends in Genetics 34 (3): 167–170. doi:10.1016/j.tig.2017.12.009. ISSN 0168-9525.
Zanet, J.; Benrabah, E.; Li, T.; Pelissier-Monier, A.; Chanut-Delalande, H.; Ronsin, B.; Bellen, H. J.; Payre, F. et al. (2015). “Pri sORF peptides induce selective proteasome-mediated protein processing”. Science 349 (6254): 1356–1358. Bibcode: 2015Sci...349.1356Z. doi:10.1126/science.aac5677. ISSN 0036-8075. PMID 26383956.
Wethmar, Klaus; Barbosa-Silva, Adriano; Andrade-Navarro, Miguel A.; Leutz, Achim (2014-01-01). “uORFdb—a comprehensive literature database on eukaryotic uORF biology”. Nucleic Acids Research 42 (D1): D60–D67. doi:10.1093/nar/gkt952. ISSN 0305-1048. PMC 3964959. PMID 24163100.
Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing (2012-09-11). “Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution” (英語). Proceedings of the National Academy of Sciences 109 (37): E2424–E2432. doi:10.1073/pnas.1207846109. ISSN 0027-8424. PMC 3443142. PMID 22927429.
Schwartz, Anton M.; Putlyaeva, Lidia V.; Covich, Milica; Klepikova, Anna V.; Akulich, Kseniya A.; Vorontsov, Ilya E.; Korneev, Kirill V.; Dmitriev, Sergey E. et al. (2016-10-01). “Early B-cell factor 1 (EBF1) is critical for transcriptional control of SLAMF1 gene in human B cells”. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1859 (10): 1259–1268. doi:10.1016/j.bbagrm.2016.07.004. PMID 27424222.
Pearson, William R.; Wood, Todd; Zhang, Zheng; Miller, Webb (1997-11-15). “Comparison of DNA Sequences with Protein Sequences” (英語). Genomics 46 (1): 24–36. doi:10.1006/geno.1997.4995. ISSN 0888-7543. PMID 9403055.
J. C. Carrington, D. D. Freed (1990): Cap-independent enhancement of translation by a plant potyvirus 5’ nontranslated region. In: J. Virol., 64: 1590-1597. doi:10.1128/JVI.64.4.1590-1597.1990. , PMID 2319646, PMC 249294
Singh, Urminder; Wurtele, Eve Syrkin. “orfipy: a fast and flexible tool for extracting ORFs” (英語). Bioinformatics. doi:10.1093/bioinformatics/btab090.

github.com

Singh, Urminder (2021-02-13), urmi-21/orfipy, https://github.com/urmi-21/orfipy 2021年2月13日閲覧。

google.co.in

scholar.google.co.in

Dwivedi, Vivek Dhar; Mishra, Sarad Kumar (2012). “ORF Investigator: A New ORF finding tool combining Pairwise Global Gene Alignment”. Research Journal of Recent Sciences 1 (11): 32–35.

harvard.edu

ui.adsabs.harvard.edu

Zanet, J.; Benrabah, E.; Li, T.; Pelissier-Monier, A.; Chanut-Delalande, H.; Ronsin, B.; Bellen, H. J.; Payre, F. et al. (2015). “Pri sORF peptides induce selective proteasome-mediated protein processing”. Science 349 (6254): 1356–1358. Bibcode: 2015Sci...349.1356Z. doi:10.1126/science.aac5677. ISSN 0036-8075. PMID 26383956.

nih.gov

pubmed.ncbi.nlm.nih.gov

Zanet, J.; Benrabah, E.; Li, T.; Pelissier-Monier, A.; Chanut-Delalande, H.; Ronsin, B.; Bellen, H. J.; Payre, F. et al. (2015). “Pri sORF peptides induce selective proteasome-mediated protein processing”. Science 349 (6254): 1356–1358. Bibcode: 2015Sci...349.1356Z. doi:10.1126/science.aac5677. ISSN 0036-8075. PMID 26383956.
Wethmar, Klaus; Barbosa-Silva, Adriano; Andrade-Navarro, Miguel A.; Leutz, Achim (2014-01-01). “uORFdb—a comprehensive literature database on eukaryotic uORF biology”. Nucleic Acids Research 42 (D1): D60–D67. doi:10.1093/nar/gkt952. ISSN 0305-1048. PMC 3964959. PMID 24163100.
Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing (2012-09-11). “Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution” (英語). Proceedings of the National Academy of Sciences 109 (37): E2424–E2432. doi:10.1073/pnas.1207846109. ISSN 0027-8424. PMC 3443142. PMID 22927429.
Schwartz, Anton M.; Putlyaeva, Lidia V.; Covich, Milica; Klepikova, Anna V.; Akulich, Kseniya A.; Vorontsov, Ilya E.; Korneev, Kirill V.; Dmitriev, Sergey E. et al. (2016-10-01). “Early B-cell factor 1 (EBF1) is critical for transcriptional control of SLAMF1 gene in human B cells”. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1859 (10): 1259–1268. doi:10.1016/j.bbagrm.2016.07.004. PMID 27424222.
Pearson, William R.; Wood, Todd; Zhang, Zheng; Miller, Webb (1997-11-15). “Comparison of DNA Sequences with Protein Sequences” (英語). Genomics 46 (1): 24–36. doi:10.1006/geno.1997.4995. ISSN 0888-7543. PMID 9403055.
J. C. Carrington, D. D. Freed (1990): Cap-independent enhancement of translation by a plant potyvirus 5’ nontranslated region. In: J. Virol., 64: 1590-1597. doi:10.1128/JVI.64.4.1590-1597.1990. , PMID 2319646, PMC 249294

ncbi.nlm.nih.gov

Wethmar, Klaus; Barbosa-Silva, Adriano; Andrade-Navarro, Miguel A.; Leutz, Achim (2014-01-01). “uORFdb—a comprehensive literature database on eukaryotic uORF biology”. Nucleic Acids Research 42 (D1): D60–D67. doi:10.1093/nar/gkt952. ISSN 0305-1048. PMC 3964959. PMID 24163100.
Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing (2012-09-11). “Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution” (英語). Proceedings of the National Academy of Sciences 109 (37): E2424–E2432. doi:10.1073/pnas.1207846109. ISSN 0027-8424. PMC 3443142. PMID 22927429.
“ORFfinder”. www.ncbi.nlm.nih.gov. 2021年6月4日閲覧。

pmc.ncbi.nlm.nih.gov

Wethmar, Klaus; Barbosa-Silva, Adriano; Andrade-Navarro, Miguel A.; Leutz, Achim (2014-01-01). “uORFdb—a comprehensive literature database on eukaryotic uORF biology”. Nucleic Acids Research 42 (D1): D60–D67. doi:10.1093/nar/gkt952. ISSN 0305-1048. PMC 3964959. PMID 24163100.
Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing (2012-09-11). “Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution” (英語). Proceedings of the National Academy of Sciences 109 (37): E2424–E2432. doi:10.1073/pnas.1207846109. ISSN 0027-8424. PMC 3443142. PMID 22927429.
J. C. Carrington, D. D. Freed (1990): Cap-independent enhancement of translation by a plant potyvirus 5’ nontranslated region. In: J. Virol., 64: 1590-1597. doi:10.1128/JVI.64.4.1590-1597.1990. , PMID 2319646, PMC 249294

ghr.nlm.nih.gov

“Open reading frame”. U.S. National Library of Medicine (2015年10月19日). 2015年10月22日閲覧。

oup.com

academic.oup.com

Singh, Urminder; Wurtele, Eve Syrkin. “orfipy: a fast and flexible tool for extracting ORFs” (英語). Bioinformatics. doi:10.1093/bioinformatics/btab090.

semanticscholar.org

Pearson, William R.; Wood, Todd; Zhang, Zheng; Miller, Webb (1997-11-15). “Comparison of DNA Sequences with Protein Sequences” (英語). Genomics 46 (1): 24–36. doi:10.1006/geno.1997.4995. ISSN 0888-7543. PMID 9403055.

wikipedia.org

en.wikipedia.org

Deonier, Richard; Simon Tavaré; Michael Waterman (2005). Computational Genome Analysis: an introduction. Springer-Verlag. p. 25. ISBN 978-0-387-98785-9

worldcat.org

search.worldcat.org

Sieber, Patricia; Platzer, Matthias; Schuster, Stefan (March 2018). “The Definition of Open Reading Frame Revisited”. Trends in Genetics 34 (3): 167–170. doi:10.1016/j.tig.2017.12.009. ISSN 0168-9525.
Zanet, J.; Benrabah, E.; Li, T.; Pelissier-Monier, A.; Chanut-Delalande, H.; Ronsin, B.; Bellen, H. J.; Payre, F. et al. (2015). “Pri sORF peptides induce selective proteasome-mediated protein processing”. Science 349 (6254): 1356–1358. Bibcode: 2015Sci...349.1356Z. doi:10.1126/science.aac5677. ISSN 0036-8075. PMID 26383956.
Wethmar, Klaus; Barbosa-Silva, Adriano; Andrade-Navarro, Miguel A.; Leutz, Achim (2014-01-01). “uORFdb—a comprehensive literature database on eukaryotic uORF biology”. Nucleic Acids Research 42 (D1): D60–D67. doi:10.1093/nar/gkt952. ISSN 0305-1048. PMC 3964959. PMID 24163100.
Lee, Sooncheol; Liu, Botao; Lee, Soohyun; Huang, Sheng-Xiong; Shen, Ben; Qian, Shu-Bing (2012-09-11). “Global mapping of translation initiation sites in mammalian cells at single-nucleotide resolution” (英語). Proceedings of the National Academy of Sciences 109 (37): E2424–E2432. doi:10.1073/pnas.1207846109. ISSN 0027-8424. PMC 3443142. PMID 22927429.
Pearson, William R.; Wood, Todd; Zhang, Zheng; Miller, Webb (1997-11-15). “Comparison of DNA Sequences with Protein Sequences” (英語). Genomics 46 (1): 24–36. doi:10.1006/geno.1997.4995. ISSN 0888-7543. PMID 9403055.

worldcat.org

Slonczewski, Joan; John Watkins Foster (2009). Microbiology: An Evolving Science. New York: W.W. Norton & Co.. ISBN 978-0-393-97857-5. OCLC 185042615

ysu.edu

bioinformatics.ysu.edu

“OrfPredictor”. bioinformatics.ysu.edu. 2021年6月4日閲覧。