ポリアデニル化 (Japanese Wikipedia)

Analysis of information sources in references of the Wikipedia article "ポリアデニル化" in Japanese language version.

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1asm.org

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asm.org (Global: 3,555^th place; Japanese: 2,938^th place)

mmbr.asm.org

Richter, Joel D. (1999). “Cytoplasmic Polyadenylation in Development and Beyond”. Microbiology and Molecular Biology Reviews 63 (2): 446–56. PMC 98972. PMID 10357857.

doi.org (Global: 2^nd place; Japanese: 6^th place)

Proudfoot, Nick J.; Furger, Andre; Dye, Michael J. (2002). “Integrating mRNA Processing with Transcription”. Cell 108 (4): 501–12. doi:10.1016/S0092-8674(02)00617-7. PMID 11909521.
Guhaniyogi, J; Brewer, G (2001). “Regulation of mRNA stability in mammalian cells”. Gene 265 (1–2): 11–23. doi:10.1016/S0378-1119(01)00350-X. PMID 11255003.
Steege, Deborah A. (2000). “Emerging features of mRNA decay in bacteria”. RNA 6 (8): 1079–90. doi:10.1017/S1355838200001023. PMC 1369983. PMID 10943888.
Anderson, James T. (2005). “RNA Turnover: Unexpected Consequences of Being Tailed”. Current Biology 15 (16): R635–8. doi:10.1016/j.cub.2005.08.002. PMID 16111937.
Stevens, A (1963). “Ribonucleic Acids-Biosynthesis and Degradation”. Annual Review of Biochemistry 32: 15–42. doi:10.1146/annurev.bi.32.070163.000311. PMID 14140701.
Abaza, I.; Gebauer, F. (2008). “Trading translation with RNA-binding proteins”. RNA 14 (3): 404–9. doi:10.1261/rna.848208. PMC 2248257. PMID 18212021.
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Hunt, Arthur G; Xu, Ruqiang; Addepalli, Balasubrahmanyam; Rao, Suryadevara; Forbes, Kevin P; Meeks, Lisa R; Xing, Denghui; Mo, Min et al. (2008). “Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling”. BMC Genomics 9: 220. doi:10.1186/1471-2164-9-220. PMC 2391170. PMID 18479511.
Davila Lopez, M.; Samuelsson, T. (2007). “Early evolution of histone mRNA 3' end processing”. RNA 14 (1): 1–10. doi:10.1261/rna.782308. PMC 2151031. PMID 17998288.
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Yoshikawa, M. (2005). “A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis”. Genes & Development 19 (18): 2164–75. doi:10.1101/gad.1352605. PMC 1221887. PMID 16131612.
Amaral, Paulo P.; Mattick, John S. (2008). “Noncoding RNA in development”. Mammalian Genome 19 (7–8): 454–92. doi:10.1007/s00335-008-9136-7. PMID 18839252.
Liu, D.; Brockman, J. M.; Dass, B.; Hutchins, L. N.; Singh, P.; McCarrey, J. R.; MacDonald, C. C.; Graber, J. H. (2006). “Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis”. Nucleic Acids Research 35 (1): 234–46. doi:10.1093/nar/gkl919. PMC 1802579. PMID 17158511.
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Yang, Q.; Gilmartin, G. M.; Doublie, S. (2010). “Structural basis of UGUA recognition by the Nudix protein CFIm25 and implications for a regulatory role in mRNA 3' processing”. Proceedings of the National Academy of Sciences 107 (22): 10062–7. doi:10.1073/pnas.1000848107.
Yang, Qin; Coseno, Molly; Gilmartin, Gregory M.; Doublié, Sylvie (2011). “Crystal Structure of a Human Cleavage Factor CFIm25/CFIm68/RNA Complex Provides an Insight into Poly(A) Site Recognition and RNA Looping”. Structure 19 (3): 368–77. doi:10.1016/j.str.2010.12.021. PMC 3056899. PMID 21295486.
Venkataraman, K. (2005). “Analysis of a noncanonical poly(A) site reveals a tripartite mechanism for vertebrate poly(A) site recognition”. Genes & Development 19 (11): 1315–27. doi:10.1101/gad.1298605. PMC 1142555. PMID 15937220.
Millevoi, Stefania; Loulergue, Clarisse; Dettwiler, Sabine; Karaa, Sarah Zeïneb; Keller, Walter; Antoniou, Michael; Vagner, StéPhan (2006). “An interaction between U2AF 65 and CF Im links the splicing and 3′ end processing machineries”. The EMBO Journal 25 (20): 4854–64. doi:10.1038/sj.emboj.7601331. PMC 1618107. PMID 17024186.
Shen, Y.; Ji, G.; Haas, B. J.; Wu, X.; Zheng, J.; Reese, G. J.; Li, Q. Q. (2008). “Genome level analysis of rice mRNA 3'-end processing signals and alternative polyadenylation”. Nucleic Acids Research 36 (9): 3150–61. doi:10.1093/nar/gkn158. PMC 2396415. PMID 18411206.
Glover-Cutter, Kira; Kim, Soojin; Espinosa, Joaquin; Bentley, David L (2007). “RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes”. Nature Structural & Molecular Biology 15 (1): 71–8. doi:10.1038/nsmb1352.
Stumpf, G.; Domdey, H. (1996). “Dependence of Yeast Pre-mRNA 3'-End Processing on CFT1: A Sequence Homolog of the Mammalian AAUAAA Binding Factor”. Science 274 (5292): 1517–20. doi:10.1126/science.274.5292.1517. PMID 8929410.
Iseli, C.; Stevenson, B. J.; De Souza, S. J.; Samaia, H. B.; Camargo, A. A.; Buetow, K. H.; Strausberg, R. L.; Simpson, A. J.G. et al. (2002). “Long-Range Heterogeneity at the 3' Ends of Human mRNAs”. Genome Research 12 (7): 1068–74. doi:10.1101/gr.62002. PMC 186619. PMID 12097343.
Balbo, Paul B.; Bohm, Andrew (2007). “Mechanism of Poly(A) Polymerase: Structure of the Enzyme-MgATP-RNA Ternary Complex and Kinetic Analysis”. Structure 15 (9): 1117–31. doi:10.1016/j.str.2007.07.010. PMC 2032019. PMID 17850751.
Viphakone, N.; Voisinet-Hakil, F.; Minvielle-Sebastia, L. (2008). “Molecular dissection of mRNA poly(A) tail length control in yeast”. Nucleic Acids Research 36 (7): 2418–33. doi:10.1093/nar/gkn080. PMC 2367721. PMID 18304944.
Wahle, Elmar (1995). “Poly(A) Tail Length Control Is Caused by Termination of Processive Synthesis”. Journal of Biological Chemistry. 270 (6): 2800–2808. doi:10.1074/jbc.270.6.2800 (inactive 18 March 2010). PMID 7852352.{{cite journal2}}: CS1メンテナンス: リンク切れのDOI (カテゴリ) CS1メンテナンス: 明示されていないフリーアクセスDOI (カテゴリ)
Dichtl, B.; Blank, D; Sadowski, M; Hübner, W; Weiser, S; Keller, W (2002). “Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination”. The EMBO Journal 21 (15): 4125–35. doi:10.1093/emboj/cdf390. PMC 126137. PMID 12145212.
Nag, Anita; Narsinh, Kazim; Martinson, Harold G (2007). “The poly(A)-dependent transcriptional pause is mediated by CPSF acting on the body of the polymerase”. Nature Structural & Molecular Biology 14 (7): 662–9. doi:10.1038/nsmb1253.
Coller, J. M.; Gray, N. K.; Wickens, M. P. (1998). “mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation”. Genes & Development 12 (20): 3226–35. doi:10.1101/gad.12.20.3226.
Siddiqui, N.; Mangus, D. A.; Chang, T.-C.; Palermino, J.-M.; Shyu, A.-B.; Gehring, K. (2007). “Poly(A) Nuclease Interacts with the C-terminal Domain of Polyadenylate-binding Protein Domain from Poly(A)-binding Protein”. Journal of Biological Chemistry 282 (34): 25067–75. doi:10.1074/jbc.M701256200. PMID 17595167.
Vinciguerra, Patrizia; Stutz, FrançOise (2004). “mRNA export: an assembly line from genes to nuclear pores”. Current Opinion in Cell Biology 16 (3): 285–92. doi:10.1016/j.ceb.2004.03.013. PMID 15145353.
Gray, N. K.; Coller, JM; Dickson, KS; Wickens, M (2000). “Multiple portions of poly(A)-binding protein stimulate translation in vivo”. The EMBO Journal 19 (17): 4723–33. doi:10.1093/emboj/19.17.4723. PMC 302064. PMID 10970864.
Meaux, S.; Van Hoof, A (2006). “Yeast transcripts cleaved by an internal ribozyme provide new insight into the role of the cap and poly(A) tail in translation and mRNA decay”. RNA 12 (7): 1323–37. doi:10.1261/rna.46306. PMC 1484436. PMID 16714281.
Meijer, H. A.; Bushell, M.; Hill, K.; Gant, T. W.; Willis, A. E.; Jones, P.; De Moor, C. H. (2007). “A novel method for poly(A) fractionation reveals a large population of mRNAs with a short poly(A) tail in mammalian cells”. Nucleic Acids Research 35 (19): e132–e132. doi:10.1093/nar/gkm830.
Lehner, B.; Sanderson, CM (2004). “A Protein Interaction Framework for Human mRNA Degradation”. Genome Research 14 (7): 1315–23. doi:10.1101/gr.2122004. PMC 442147. PMID 15231747.
Wu, L. (2006). “From the Cover: MicroRNAs direct rapid deadenylation of mRNA”. Proceedings of the National Academy of Sciences 103 (11): 4034–9. doi:10.1073/pnas.0510928103.
Cui, J.; Sackton, K. L.; Horner, V. L.; Kumar, K. E.; Wolfner, M. F. (2008). “Wispy, the Drosophila Homolog of GLD-2, Is Required During Oogenesis and Egg Activation”. Genetics 178 (4): 2017–29. doi:10.1534/genetics.107.084558. PMC 2323793. PMID 18430932.
Wilusz, Carol J.; Wormington, Michael; Peltz, Stuart W. (2001). “The cap-to-tail guide to mRNA turnover”. Nature Reviews Molecular Cell Biology 2 (4): 237–46. doi:10.1038/35067025. PMID 11283721.
Tian, B.; Hu, J; Zhang, H; Lutz, CS (2005). “A large-scale analysis of mRNA polyadenylation of human and mouse genes”. Nucleic Acids Research 33 (1): 201–12. doi:10.1093/nar/gki158. PMC 546146. PMID 15647503.
Danckwardt, Sven; Hentze, Matthias W; Kulozik, Andreas E (2008). “3′ end mRNA processing: molecular mechanisms and implications for health and disease”. The EMBO Journal 27 (3): 482–98. doi:10.1038/sj.emboj.7601932. PMC 2241648. PMID 18256699.
Sandberg, R.; Neilson, J. R.; Sarma, A.; Sharp, P. A.; Burge, C. B. (2008). “Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites”. Science 320 (5883): 1643–7. doi:10.1126/science.1155390. PMC 2587246. PMID 18566288.
Ghosh, T.; Soni, K.; Scaria, V.; Halimani, M.; Bhattacharjee, C.; Pillai, B. (2008). “MicroRNA-mediated up-regulation of an alternatively polyadenylated variant of the mouse cytoplasmic -actin gene”. Nucleic Acids Research 36 (19): 6318–32. doi:10.1093/nar/gkn624. PMC 2577349. PMID 18835850.
Alt, F; Bothwell, AL; Knapp, M; Siden, E; Mather, E; Koshland, M; Baltimore, D (1980). “Synthesis of secreted and membrane-bound immunoglobulin mu heavy chains is directed by mRNAs that differ at their 3′ ends”. Cell 20 (2): 293–301. doi:10.1016/0092-8674(80)90615-7. PMID 6771018.
Tian, B.; Pan, Z.; Lee, J. Y. (2007). “Widespread mRNA polyadenylation events in introns indicate dynamic interplay between polyadenylation and splicing”. Genome Research 17 (2): 156–65. doi:10.1101/gr.5532707. PMC 1781347. PMID 17210931.
Shell, S. A.; Hesse, C; Morris Jr, SM; Milcarek, C (2005). “Elevated Levels of the 64-kDa Cleavage Stimulatory Factor (CstF-64) in Lipopolysaccharide-stimulated Macrophages Influence Gene Expression and Induce Alternative Poly(A) Site Selection”. Journal of Biological Chemistry 280 (48): 39950–61. doi:10.1074/jbc.M508848200. PMID 16207706.
Danckwardt, Sven; Gantzert, Anne-Susan; Macher-Goeppinger, Stephan; Probst, Hans Christian; Gentzel, Marc; Wilm, Matthias; Gröne, Hermann-Josef; Schirmacher, Peter et al. (2011). “p38 MAPK Controls Prothrombin Expression by Regulated RNA 3′ End Processing”. Molecular Cell 41 (3): 298–310. doi:10.1016/j.molcel.2010.12.032. PMID 21292162.
Licatalosi, Donny D.; Mele, Aldo; Fak, John J.; Ule, Jernej; Kayikci, Melis; Chi, Sung Wook; Clark, Tyson A.; Schweitzer, Anthony C. et al. (2008). “HITS-CLIP yields genome-wide insights into brain alternative RNA processing”. Nature 456 (7221): 464–9. doi:10.1038/nature07488. PMC 2597294. PMID 18978773.
Hall-Pogar, T.; Liang, S.; Hague, L. K.; Lutz, C. S. (2007). “Specific trans-acting proteins interact with auxiliary RNA polyadenylation elements in the COX-2 3'-UTR”. RNA 13 (7): 1103–15. doi:10.1261/rna.577707. PMC 1894925. PMID 17507659.
Danckwardt, Sven; Kaufmann, Isabelle; Gentzel, Marc; Foerstner, Konrad U; Gantzert, Anne-Susan; Gehring, Niels H; Neu-Yilik, Gabriele; Bork, Peer et al. (2007). “Splicing factors stimulate polyadenylation via USEs at non-canonical 3′ end formation signals”. The EMBO Journal 26 (11): 2658–69. doi:10.1038/sj.emboj.7601699. PMC 1888663. PMID 17464285.
Danckwardt, Sven; Gantzert, Anne-Susan; Macher-Goeppinger, Stephan; Probst, Hans Christian; Gentzel, Marc; Wilm, Matthias; Gröne, Hermann-Josef; Schirmacher, Peter et al. (2011). “p38 MAPK Controls Prothrombin Expression by Regulated RNA 3′ End Processing”. Molecular Cell 41 (3): 298–310. doi:10.1016/j.molcel.2010.12.032. PMID 21292162.
Wood, A. J.; Schulz, R.; Woodfine, K.; Koltowska, K.; Beechey, C. V.; Peters, J.; Bourc'his, D.; Oakey, R. J. (2008). “Regulation of alternative polyadenylation by genomic imprinting”. Genes & Development 22 (9): 1141–6. doi:10.1101/gad.473408.
Jung, M.-Y.; Lorenz, L.; Richter, J. D. (2006). “Translational Control by Neuroguidin, a Eukaryotic Initiation Factor 4E and CPEB Binding Protein”. Molecular and Cellular Biology 26 (11): 4277–87. doi:10.1128/MCB.02470-05. PMC 1489097. PMID 16705177.
Sakurai, Takayuki; Sato, Masahiro; Kimura, Minoru (2005). “Diverse patterns of poly(A) tail elongation and shortening of murine maternal mRNAs from fully grown oocyte to 2-cell embryo stages”. Biochemical and Biophysical Research Communications 336 (4): 1181–9. doi:10.1016/j.bbrc.2005.08.250. PMID 16169522.
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Lacava, John; Houseley, Jonathan; Saveanu, Cosmin; Petfalski, Elisabeth; Thompson, Elizabeth; Jacquier, Alain; Tollervey, David (2005). “RNA Degradation by the Exosome Is Promoted by a Nuclear Polyadenylation Complex”. Cell 121 (5): 713–24. doi:10.1016/j.cell.2005.04.029. PMID 15935758.
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Chang, S. A.; Cozad, M.; MacKie, G. A.; Jones, G. H. (2007). “Kinetics of Polynucleotide Phosphorylase: Comparison of Enzymes from Streptomyces and Escherichia coli and Effects of Nucleoside Diphosphates”. Journal of Bacteriology 190 (1): 98–106. doi:10.1128/JB.00327-07. PMC 2223728. PMID 17965156.
Nagaike, T; Suzuki, T; Ueda, T (2008). “Polyadenylation in mammalian mitochondria: Insights from recent studies”. Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1779 (4): 266–9. doi:10.1016/j.bbagrm.2008.02.001.
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Ryota Yamagishi; Takeshi Tsusaka; Hiroko Mitsunaga; Takaharu Maehata; Shin-ichi Hoshino (2016-04-07). “The STAR protein QKI-7 recruits PAPD4 to regulate post-transcriptional polyadenylation of target mRNAs”. Nucleic Acids Research (Oxford, England: Oxford University Press) Volume 44 (Issue 6): 2475–2490. ISSN 0305-1048. https://doi.org/10.1093/nar/gkw118 2021年6月15日閲覧。.
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jbc.org (Global: 4,455^th place; Japanese: 3,334^th place)

Wahle, Elmar (1995). “Poly(A) Tail Length Control Is Caused by Termination of Processive Synthesis”. Journal of Biological Chemistry. 270 (6): 2800–2808. doi:10.1074/jbc.270.6.2800 (inactive 18 March 2010). PMID 7852352.{{cite journal2}}: CS1メンテナンス: リンク切れのDOI (カテゴリ) CS1メンテナンス: 明示されていないフリーアクセスDOI (カテゴリ)
Edmonds, Mary; Abrams, Richard (1960). “Polynucleotide Biosynthesis: Formation of a Sequence of Adenylate Units from Adenosine Triphosphate by an Enzyme from Thymus Nuclei”. The Journal of Biological Chemistry 235 (4): 1142–9. PMID 13819354.

medsci.org (Global: low place; Japanese: low place)

Tili, Esmerina; Michaille, Jean-Jacques; Calin, George Adrian (2008). “Expression and function of micro-RNAs in immune cells during normal or disease state”. International Journal of Medical Sciences 5 (2): 73–9. PMC 2288788. PMID 18392144. http://www.medsci.org/v05p0073.htm.

nih.gov (Global: 4^th place; Japanese: 24^th place)

pubmed.ncbi.nlm.nih.gov

Proudfoot, Nick J.; Furger, Andre; Dye, Michael J. (2002). “Integrating mRNA Processing with Transcription”. Cell 108 (4): 501–12. doi:10.1016/S0092-8674(02)00617-7. PMID 11909521.
Guhaniyogi, J; Brewer, G (2001). “Regulation of mRNA stability in mammalian cells”. Gene 265 (1–2): 11–23. doi:10.1016/S0378-1119(01)00350-X. PMID 11255003.
Richter, Joel D. (1999). “Cytoplasmic Polyadenylation in Development and Beyond”. Microbiology and Molecular Biology Reviews 63 (2): 446–56. PMC 98972. PMID 10357857.
Steege, Deborah A. (2000). “Emerging features of mRNA decay in bacteria”. RNA 6 (8): 1079–90. doi:10.1017/S1355838200001023. PMC 1369983. PMID 10943888.
Anderson, James T. (2005). “RNA Turnover: Unexpected Consequences of Being Tailed”. Current Biology 15 (16): R635–8. doi:10.1016/j.cub.2005.08.002. PMID 16111937.
Stevens, A (1963). “Ribonucleic Acids-Biosynthesis and Degradation”. Annual Review of Biochemistry 32: 15–42. doi:10.1146/annurev.bi.32.070163.000311. PMID 14140701.
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Ryota Yamagishi; Takeshi Tsusaka; Hiroko Mitsunaga; Takaharu Maehata; Shin-ichi Hoshino (2016-04-07). “The STAR protein QKI-7 recruits PAPD4 to regulate post-transcriptional polyadenylation of target mRNAs”. Nucleic Acids Research (Oxford, England: Oxford University Press) Volume 44 (Issue 6): 2475–2490. ISSN 0305-1048. https://doi.org/10.1093/nar/gkw118 2021年6月15日閲覧。.

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