結合部位 (Japanese Wikipedia)

Analysis of information sources in references of the Wikipedia article "結合部位" in Japanese language version.

refsWebsite

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books.google.com

Kenakin TP (April 2016). “Characteristics of Allosterism in Drug Action”. Allosteric Receptor Modulation in Drug Targeting. CRC Press. p. 26. ISBN 978-1-4200-1618-5
Bellelli A, Carey J (January 2018). “Reversible Ligand Binding”. Reversible Ligand Binding: Theory and Experiment. John Wiley & Sons. p. 278. ISBN 978-1-119-23848-5

cambridge.org

Wilson K (March 2010). “Enzymes”. In Wilson, Keith; Walker, John (英語). Principles and Techniques of Biochemistry and Molecular Biology. Cambridge University Press. pp. 581–624. doi:10.1017/cbo9780511841477.016. ISBN 9780511841477 2018年11月1日閲覧。

doi.org

Amos-Binks A, Patulea C, Pitre S, Schoenrock A, Gui Y, Green JR, Golshani A, Dehne F (June 2011). “Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences”. BMC Bioinformatics 12: 225. doi:10.1186/1471-2105-12-225. PMC 3120708. PMID 21635751.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
Bandyopadhyay A, Gao J (October 2016). “Targeting biomolecules with reversible covalent chemistry”. Current Opinion in Chemical Biology 34: 110–116. doi:10.1016/j.cbpa.2016.08.011. PMC 5107367. PMID 27599186.
Xu D, Jalal SI, Sledge GW, Meroueh SO (October 2016). “Small-molecule binding sites to explore protein-protein interactions in the cancer proteome”. Molecular BioSystems 12 (10): 3067–87. doi:10.1039/c6mb00231e. PMC 5030169. PMID 27452673.
Wilson K (March 2010). Principles and Techniques of Biochemistry and Molecular Biology. Cambridge University Press. pp. 581–624. doi:10.1017/cbo9780511841477.016. ISBN 9780511841477
Kumar AP, Lukman S (2018-06-06). “Allosteric binding sites in Rab11 for potential drug candidates”. PLOS One 13 (6): e0198632. doi:10.1371/journal.pone.0198632. PMC 5991966. PMID 29874286.
Wilson K (March 2010). Principles and Techniques of Biochemistry and Molecular Biology. Cambridge University Press. pp. 581–624. doi:10.1017/cbo9780511841477.016. ISBN 9780511841477
Azzaroni, Omar; Szleifer, Igal (2017-12-04). Polymer and Biopolymer Brushes. doi:10.1002/9781119455042. ISBN 978-1-119-45501-1
Clarke, Kim Gail (2013). Bioprocess engineering. Woodhead Publishing. pp. 79–84. doi:10.1533/9781782421689. ISBN 978-1-78242-167-2
Wilson K (March 2010). “Enzymes”. In Wilson, Keith; Walker, John (英語). Principles and Techniques of Biochemistry and Molecular Biology. Cambridge University Press. pp. 581–624. doi:10.1017/cbo9780511841477.016. ISBN 9780511841477 2018年11月1日閲覧。
Konc J, Janežič D (April 2014). “Binding site comparison for function prediction and pharmaceutical discovery”. Current Opinion in Structural Biology 25: 34–9. doi:10.1016/j.sbi.2013.11.012. PMID 24878342.
Fuqua, Clay; White, David (2004). Prokaryotic Intercellular Signalling. Springer Netherlands. pp. 27–71. doi:10.1007/978-94-017-0998-9_2. ISBN 9789048164837
Abrusan G, Marsh JA (2019). “Ligand Binding Site Structure Shapes Folding, Assembly and Degradation of Homomeric Protein Complexes.”. Journal of Molecular Biology 431 (19): 3871-3888. doi:10.1016/j.jmb.2019.07.014. PMC 6739599. PMID 31306664.
Abrusan G, Marsh JA (2018). “Ligand Binding Site Structure Influences the Evolution of Protein Complex Function and Topology.”. Cell Reports 22 (12): 3265-3276. doi:10.1016/j.celrep.2018.02.085. PMC 5873459. PMID 29562182.
Abrusan G, Marsh JA (2019). “Ligand-Binding-Site Structure Shapes Allosteric Signal Transduction and the Evolution of Allostery in Protein Complexes.”. Molecular Biology and Evolution 36 (8): 1711-1727. doi:10.1093/molbev/msz093. PMC 6657754. PMID 31004156.
Ahern K (January 2017). “Teaching biochemistry online at Oregon State University”. Biochemistry and Molecular Biology Education 45 (1): 25–30. doi:10.1002/bmb.20979. PMID 27228905.
Anne A, Demaille C (October 2012). “Kinetics of enzyme action on surface-attached substrates: a practical guide to progress curve analysis in any kinetic situation”. Langmuir 28 (41): 14665–71. doi:10.1021/la3030827. PMID 22978617.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
Peng J, Li XP (November 2018). “Apolipoprotein A-IV: A potential therapeutic target for atherosclerosis”. Prostaglandins & Other Lipid Mediators 139: 87–92. doi:10.1016/j.prostaglandins.2018.10.004. PMID 30352313.
McNamara JW, Sadayappan S (December 2018). “Skeletal myosin binding protein-C: An increasingly important regulator of striated muscle physiology”. Archives of Biochemistry and Biophysics 660: 121–128. doi:10.1016/j.abb.2018.10.007. PMC 6289839. PMID 30339776.
Widemann BC, Adamson PC (June 2006). “Understanding and managing methotrexate nephrotoxicity”. The Oncologist 11 (6): 694–703. doi:10.1634/theoncologist.11-6-694. PMID 16794248.
Rajagopalan PT, Zhang Z, McCourt L, Dwyer M, Benkovic SJ, Hammes GG (October 2002). “Interaction of dihydrofolate reductase with methotrexate: ensemble and single-molecule kinetics”. Proceedings of the National Academy of Sciences of the United States of America 99 (21): 13481–6. doi:10.1073/pnas.172501499. PMC 129699. PMID 12359872.
Widemann BC, Adamson PC (June 2006). “Understanding and managing methotrexate nephrotoxicity”. The Oncologist 11 (6): 694–703. doi:10.1634/theoncologist.11-6-694. PMID 16794248.
Frishman, William H.; Cheng-Lai, Angela; Chen, Julie, eds (2000). Current Cardiovascular Drugs. doi:10.1007/978-1-4615-6767-7. ISBN 978-1-57340-135-7
Montecucco C, Molgó J (June 2005). “Botulinal neurotoxins: revival of an old killer”. Current Opinion in Pharmacology 5 (3): 274–9. doi:10.1016/j.coph.2004.12.006. PMID 15907915.
Konc J, Janežič D (April 2014). “Binding site comparison for function prediction and pharmaceutical discovery”. Current Opinion in Structural Biology 25: 34–9. doi:10.1016/j.sbi.2013.11.012. PMID 24878342.
Roche DB, Brackenridge DA, McGuffin LJ (December 2015). “Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods”. International Journal of Molecular Sciences 16 (12): 29829–42. doi:10.3390/ijms161226202. PMC 4691145. PMID 26694353.
Broomhead NK, Soliman ME (March 2017). “Can We Rely on Computational Predictions To Correctly Identify Ligand Binding Sites on Novel Protein Drug Targets? Assessment of Binding Site Prediction Methods and a Protocol for Validation of Predicted Binding Sites”. Cell Biochemistry and Biophysics 75 (1): 15–23. doi:10.1007/s12013-016-0769-y. PMID 27796788.
Jones, S.; Thornton, J. M. (1997-09-12). “Analysis of protein-protein interaction sites using surface patches”. Journal of Molecular Biology 272 (1): 121–132. doi:10.1006/jmbi.1997.1234. ISSN 0022-2836. PMID 9299342.

nih.gov

pubmed.ncbi.nlm.nih.gov

Amos-Binks A, Patulea C, Pitre S, Schoenrock A, Gui Y, Green JR, Golshani A, Dehne F (June 2011). “Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences”. BMC Bioinformatics 12: 225. doi:10.1186/1471-2105-12-225. PMC 3120708. PMID 21635751.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
Bandyopadhyay A, Gao J (October 2016). “Targeting biomolecules with reversible covalent chemistry”. Current Opinion in Chemical Biology 34: 110–116. doi:10.1016/j.cbpa.2016.08.011. PMC 5107367. PMID 27599186.
Xu D, Jalal SI, Sledge GW, Meroueh SO (October 2016). “Small-molecule binding sites to explore protein-protein interactions in the cancer proteome”. Molecular BioSystems 12 (10): 3067–87. doi:10.1039/c6mb00231e. PMC 5030169. PMID 27452673.
Kumar AP, Lukman S (2018-06-06). “Allosteric binding sites in Rab11 for potential drug candidates”. PLOS One 13 (6): e0198632. doi:10.1371/journal.pone.0198632. PMC 5991966. PMID 29874286.
Konc J, Janežič D (April 2014). “Binding site comparison for function prediction and pharmaceutical discovery”. Current Opinion in Structural Biology 25: 34–9. doi:10.1016/j.sbi.2013.11.012. PMID 24878342.
Abrusan G, Marsh JA (2019). “Ligand Binding Site Structure Shapes Folding, Assembly and Degradation of Homomeric Protein Complexes.”. Journal of Molecular Biology 431 (19): 3871-3888. doi:10.1016/j.jmb.2019.07.014. PMC 6739599. PMID 31306664.
Abrusan G, Marsh JA (2018). “Ligand Binding Site Structure Influences the Evolution of Protein Complex Function and Topology.”. Cell Reports 22 (12): 3265-3276. doi:10.1016/j.celrep.2018.02.085. PMC 5873459. PMID 29562182.
Abrusan G, Marsh JA (2019). “Ligand-Binding-Site Structure Shapes Allosteric Signal Transduction and the Evolution of Allostery in Protein Complexes.”. Molecular Biology and Evolution 36 (8): 1711-1727. doi:10.1093/molbev/msz093. PMC 6657754. PMID 31004156.
Ahern K (January 2017). “Teaching biochemistry online at Oregon State University”. Biochemistry and Molecular Biology Education 45 (1): 25–30. doi:10.1002/bmb.20979. PMID 27228905.
Anne A, Demaille C (October 2012). “Kinetics of enzyme action on surface-attached substrates: a practical guide to progress curve analysis in any kinetic situation”. Langmuir 28 (41): 14665–71. doi:10.1021/la3030827. PMID 22978617.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
Peng J, Li XP (November 2018). “Apolipoprotein A-IV: A potential therapeutic target for atherosclerosis”. Prostaglandins & Other Lipid Mediators 139: 87–92. doi:10.1016/j.prostaglandins.2018.10.004. PMID 30352313.
McNamara JW, Sadayappan S (December 2018). “Skeletal myosin binding protein-C: An increasingly important regulator of striated muscle physiology”. Archives of Biochemistry and Biophysics 660: 121–128. doi:10.1016/j.abb.2018.10.007. PMC 6289839. PMID 30339776.
Widemann BC, Adamson PC (June 2006). “Understanding and managing methotrexate nephrotoxicity”. The Oncologist 11 (6): 694–703. doi:10.1634/theoncologist.11-6-694. PMID 16794248.
Rajagopalan PT, Zhang Z, McCourt L, Dwyer M, Benkovic SJ, Hammes GG (October 2002). “Interaction of dihydrofolate reductase with methotrexate: ensemble and single-molecule kinetics”. Proceedings of the National Academy of Sciences of the United States of America 99 (21): 13481–6. doi:10.1073/pnas.172501499. PMC 129699. PMID 12359872.
Widemann BC, Adamson PC (June 2006). “Understanding and managing methotrexate nephrotoxicity”. The Oncologist 11 (6): 694–703. doi:10.1634/theoncologist.11-6-694. PMID 16794248.
Montecucco C, Molgó J (June 2005). “Botulinal neurotoxins: revival of an old killer”. Current Opinion in Pharmacology 5 (3): 274–9. doi:10.1016/j.coph.2004.12.006. PMID 15907915.
Konc J, Janežič D (April 2014). “Binding site comparison for function prediction and pharmaceutical discovery”. Current Opinion in Structural Biology 25: 34–9. doi:10.1016/j.sbi.2013.11.012. PMID 24878342.
Roche DB, Brackenridge DA, McGuffin LJ (December 2015). “Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods”. International Journal of Molecular Sciences 16 (12): 29829–42. doi:10.3390/ijms161226202. PMC 4691145. PMID 26694353.
Broomhead NK, Soliman ME (March 2017). “Can We Rely on Computational Predictions To Correctly Identify Ligand Binding Sites on Novel Protein Drug Targets? Assessment of Binding Site Prediction Methods and a Protocol for Validation of Predicted Binding Sites”. Cell Biochemistry and Biophysics 75 (1): 15–23. doi:10.1007/s12013-016-0769-y. PMID 27796788.
Jones, S.; Thornton, J. M. (1997-09-12). “Analysis of protein-protein interaction sites using surface patches”. Journal of Molecular Biology 272 (1): 121–132. doi:10.1006/jmbi.1997.1234. ISSN 0022-2836. PMID 9299342.

ncbi.nlm.nih.gov

Amos-Binks A, Patulea C, Pitre S, Schoenrock A, Gui Y, Green JR, Golshani A, Dehne F (June 2011). “Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences”. BMC Bioinformatics 12: 225. doi:10.1186/1471-2105-12-225. PMC 3120708. PMID 21635751.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
Bandyopadhyay A, Gao J (October 2016). “Targeting biomolecules with reversible covalent chemistry”. Current Opinion in Chemical Biology 34: 110–116. doi:10.1016/j.cbpa.2016.08.011. PMC 5107367. PMID 27599186.
Xu D, Jalal SI, Sledge GW, Meroueh SO (October 2016). “Small-molecule binding sites to explore protein-protein interactions in the cancer proteome”. Molecular BioSystems 12 (10): 3067–87. doi:10.1039/c6mb00231e. PMC 5030169. PMID 27452673.
Kumar AP, Lukman S (2018-06-06). “Allosteric binding sites in Rab11 for potential drug candidates”. PLOS One 13 (6): e0198632. doi:10.1371/journal.pone.0198632. PMC 5991966. PMID 29874286.
Abrusan G, Marsh JA (2019). “Ligand Binding Site Structure Shapes Folding, Assembly and Degradation of Homomeric Protein Complexes.”. Journal of Molecular Biology 431 (19): 3871-3888. doi:10.1016/j.jmb.2019.07.014. PMC 6739599. PMID 31306664.
Abrusan G, Marsh JA (2018). “Ligand Binding Site Structure Influences the Evolution of Protein Complex Function and Topology.”. Cell Reports 22 (12): 3265-3276. doi:10.1016/j.celrep.2018.02.085. PMC 5873459. PMID 29562182.
Abrusan G, Marsh JA (2019). “Ligand-Binding-Site Structure Shapes Allosteric Signal Transduction and the Evolution of Allostery in Protein Complexes.”. Molecular Biology and Evolution 36 (8): 1711-1727. doi:10.1093/molbev/msz093. PMC 6657754. PMID 31004156.
Spitzer R, Cleves AE, Varela R, Jain AN (April 2014). “Protein function annotation by local binding site surface similarity”. Proteins 82 (4): 679–94. doi:10.1002/prot.24450. PMC 3949165. PMID 24166661.
McNamara JW, Sadayappan S (December 2018). “Skeletal myosin binding protein-C: An increasingly important regulator of striated muscle physiology”. Archives of Biochemistry and Biophysics 660: 121–128. doi:10.1016/j.abb.2018.10.007. PMC 6289839. PMID 30339776.
Rajagopalan PT, Zhang Z, McCourt L, Dwyer M, Benkovic SJ, Hammes GG (October 2002). “Interaction of dihydrofolate reductase with methotrexate: ensemble and single-molecule kinetics”. Proceedings of the National Academy of Sciences of the United States of America 99 (21): 13481–6. doi:10.1073/pnas.172501499. PMC 129699. PMID 12359872.
Roche DB, Brackenridge DA, McGuffin LJ (December 2015). “Proteins and Their Interacting Partners: An Introduction to Protein-Ligand Binding Site Prediction Methods”. International Journal of Molecular Sciences 16 (12): 29829–42. doi:10.3390/ijms161226202. PMC 4691145. PMID 26694353.

meshb.nlm.nih.gov

“Binding site”. Medical Subject Headings (MeSH). U.S. National Library of Medicine. 2020年7月25日閲覧。 “The parts of a macromolecule that directly participate in its specific combination with another molecule.”
“Ligands”. Medical Subject Headings (MeSH). U.S. National Library of Medicine. 2020年7月25日閲覧。 “A molecule that binds to another molecule, used especially to refer to a small molecule that binds specifically to a larger molecule.”

worldcat.org

worldcat.org

Dobson, C M; Gerrard, J A; Pratt, A J (2008). Foundations of chemical biology. Oxford University Press. ISBN 9780199248995. OCLC 487962823
Creighton, Thomas E. (2010). The Biophysical Chemistry of Nucleic Acids & Proteins. Helvetian Press. ISBN 978-0956478115. OCLC 760830351
Creighton, Thomas E. (2010). The Biophysical Chemistry of Nucleic Acids & Proteins. Helvetian Press. ISBN 978-0956478115. OCLC 760830351
Morris, James R.; Hartl, Daniel L.; Knoll, Andrew H.. Biology : how life works (Second ed.). New York, NY. ISBN 9781464126093. OCLC 937824456

search.worldcat.org

Jones, S.; Thornton, J. M. (1997-09-12). “Analysis of protein-protein interaction sites using surface patches”. Journal of Molecular Biology 272 (1): 121–132. doi:10.1006/jmbi.1997.1234. ISSN 0022-2836. PMID 9299342.