Предпочтение кодонов (Russian Wikipedia)

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Hershberg R., Petrov D. A. Selection on codon bias. (англ.) // Annual review of genetics. — 2008. — Vol. 42. — P. 287—299. — doi:10.1146/annurev.genet.42.110807.091442. — PMID 18983258. [исправить]
Behura S. K., Severson D. W. Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes. (англ.) // Biological reviews of the Cambridge Philosophical Society. — 2013. — Vol. 88, no. 1. — P. 49—61. — doi:10.1111/j.1469-185X.2012.00242.x. — PMID 22889422. [исправить]
Chen S. L., Lee W., Hottes A. K., Shapiro L., McAdams H. H. Codon usage between genomes is constrained by genome-wide mutational processes. (англ.) // Proceedings of the National Academy of Sciences of the United States of America. — 2004. — Vol. 101, no. 10. — P. 3480—3485. — doi:10.1073/pnas.0307827100. — PMID 14990797. [исправить]
Kanaya S., Yamada Y., Kinouchi M., Kudo Y., Ikemura T. Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. (англ.) // Journal of molecular evolution. — 2001. — Vol. 53, no. 4-5. — P. 290—298. — doi:10.1007/s002390010219. — PMID 11675589. [исправить]
Nielsen R., Bauer Du Mont V. L., Hubisz M. J., Aquadro C. F. Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 1. — P. 228—235. — doi:10.1093/molbev/msl146. — PMID 17041152. [исправить]
Sharp P. M., Bailes E., Grocock R. J., Peden J. F., Sockett R. E. Variation in the strength of selected codon usage bias among bacteria. (англ.) // Nucleic acids research. — 2005. — Vol. 33, no. 4. — P. 1141—1153. — doi:10.1093/nar/gki242. — PMID 15728743. [исправить]
Stoletzki N., Eyre-Walker A. Synonymous codon usage in Escherichia coli: selection for translational accuracy. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 2. — P. 374—381. — doi:10.1093/molbev/msl166. — PMID 17101719. [исправить]
Shah P., Gilchrist M. A. Effect of correlated tRNA abundances on translation errors and evolution of codon usage bias. (англ.) // PLoS genetics. — 2010. — Vol. 6, no. 9. — P. e1001128. — doi:10.1371/journal.pgen.1001128. — PMID 20862306. [исправить]
Warnecke T., Hurst L. D. Evidence for a trade-off between translational efficiency and splicing regulation in determining synonymous codon usage in Drosophila melanogaster. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 12. — P. 2755—2762. — doi:10.1093/molbev/msm210. — PMID 17905999. [исправить]
Thanaraj T. A., Argos P. Ribosome-mediated translational pause and protein domain organization. (англ.) // Protein science : a publication of the Protein Society. — 1996. — Vol. 5, no. 8. — P. 1594—1612. — doi:10.1002/pro.5560050814. — PMID 8844849. [исправить]
Gu W., Zhou T., Wilke C. O. A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes. (англ.) // Public Library of Science for Computational Biology. — 2010. — Vol. 6, no. 2. — P. e1000664. — doi:10.1371/journal.pcbi.1000664. — PMID 20140241. [исправить]
Tuller T., Carmi A., Vestsigian K., Navon S., Dorfan Y., Zaborske J., Pan T., Dahan O., Furman I., Pilpel Y. An evolutionarily conserved mechanism for controlling the efficiency of protein translation. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 344—354. — doi:10.1016/j.cell.2010.03.031. — PMID 20403328. [исправить]
Fredrick K., Ibba M. How the sequence of a gene can tune its translation. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 227—229. — doi:10.1016/j.cell.2010.03.033. — PMID 20403320. [исправить]
Cannarozzi G., Schraudolph N. N., Faty M., von Rohr P., Friberg M. T., Roth A. C., Gonnet P., Gonnet G., Barral Y. A role for codon order in translation dynamics. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 355—367. — doi:10.1016/j.cell.2010.02.036. — PMID 20403329. [исправить]
Zeeberg B. Shannon information theoretic computation of synonymous codon usage biases in coding regions of human and mouse genomes. (англ.) // Genome research. — 2002. — Vol. 12, no. 6. — P. 944—955. — doi:10.1101/gr.213402. — PMID 12045147. [исправить]
Wan X. F., Xu D., Kleinhofs A., Zhou J. Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes. (англ.) // BMC evolutionary biology. — 2004. — Vol. 4. — P. 19. — doi:10.1186/1471-2148-4-19. — PMID 15222899. [исправить]
Su M. W., Lin H. M., Yuan H. S., Chu W. C. Categorizing host-dependent RNA viruses by principal component analysis of their codon usage preferences. (англ.) // Journal of computational biology : a journal of computational molecular cell biology. — 2009. — Vol. 16, no. 11. — P. 1539—1547. — doi:10.1089/cmb.2009.0046. — PMID 19958082. [исправить]
Kloster M., Tang C. SCUMBLE: a method for systematic and accurate detection of codon usage bias by maximum likelihood estimation. (англ.) // Nucleic acids research. — 2008. — Vol. 36, no. 11. — P. 3819—3827. — doi:10.1093/nar/gkn288. — PMID 18495752. [исправить]
Angellotti M. C., Bhuiyan S. B., Chen G., Wan X. F. CodonO: codon usage bias analysis within and across genomes. (англ.) // Nucleic acids research. — 2007. — Vol. 35. — P. 132—136. — doi:10.1093/nar/gkm392. — PMID 17537810. [исправить]
Puigbò P., Aragonès L., Garcia-Vallvé S. RCDI/eRCDI: a web-server to estimate codon usage deoptimization. (англ.) // BMC research notes. — 2010. — Vol. 3. — P. 87. — doi:10.1186/1756-0500-3-87. — PMID 20356391. [исправить]
Li G. W., Oh E., Weissman J. S. The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria. (англ.) // Nature. — 2012. — Vol. 484, no. 7395. — P. 538—541. — doi:10.1038/nature10965. — PMID 22456704. [исправить]
Vicario S., Moriyama E. N., Powell J. R. Codon usage in twelve species of Drosophila. (англ.) // BMC evolutionary biology. — 2007. — Vol. 7. — P. 226. — doi:10.1186/1471-2148-7-226. — PMID 18005411. [исправить]
Jørgensen F. G., Schierup M. H., Clark A. G. Heterogeneity in regional GC content and differential usage of codons and amino acids in GC-poor and GC-rich regions of the genome of Apis mellifera. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 2. — P. 611—619. — doi:10.1093/molbev/msl190. — PMID 17150976. [исправить]
Gustafsson C., Govindarajan S., Minshull J. Codon bias and heterologous protein expression. (англ.) // Trends in biotechnology. — 2004. — Vol. 22, no. 7. — P. 346—353. — doi:10.1016/j.tibtech.2004.04.006. — PMID 15245907. [исправить]
Mauro V. P., Chappell S. A. A critical analysis of codon optimization in human therapeutics. (англ.) // Trends in molecular medicine. — 2014. — Vol. 20, no. 11. — P. 604—613. — doi:10.1016/j.molmed.2014.09.003. — PMID 25263172. [исправить]

nih.gov

ncbi.nlm.nih.gov

Hershberg R., Petrov D. A. Selection on codon bias. (англ.) // Annual review of genetics. — 2008. — Vol. 42. — P. 287—299. — doi:10.1146/annurev.genet.42.110807.091442. — PMID 18983258. [исправить]
Behura S. K., Severson D. W. Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes. (англ.) // Biological reviews of the Cambridge Philosophical Society. — 2013. — Vol. 88, no. 1. — P. 49—61. — doi:10.1111/j.1469-185X.2012.00242.x. — PMID 22889422. [исправить]
Andersson G. E., Sharp P. M. Codon usage in the Mycobacterium tuberculosis complex. (англ.) // Microbiology (Reading, England). — 1996. — Vol. 142 ( Pt 4). — P. 915—925. — PMID 8936318. [исправить]
Andersson S. G., Sharp P. M. Codon usage and base composition in Rickettsia prowazekii. (англ.) // Journal of molecular evolution. — 1996. — Vol. 42, no. 5. — P. 525—536. — PMID 8662004. [исправить]
Duret L. Evolution of synonymous codon usage in metazoans. (англ.) // Current opinion in genetics & development. — 2002. — Vol. 12, no. 6. — P. 640—649. — PMID 12433576. [исправить]
Ikemura T. Codon usage and tRNA content in unicellular and multicellular organisms. (англ.) // Molecular biology and evolution. — 1985. — Vol. 2, no. 1. — P. 13—34. — PMID 3916708. [исправить]
Chen S. L., Lee W., Hottes A. K., Shapiro L., McAdams H. H. Codon usage between genomes is constrained by genome-wide mutational processes. (англ.) // Proceedings of the National Academy of Sciences of the United States of America. — 2004. — Vol. 101, no. 10. — P. 3480—3485. — doi:10.1073/pnas.0307827100. — PMID 14990797. [исправить]
Grantham R., Gautier C., Gouy M., Mercier R., Pavé A. Codon catalog usage and the genome hypothesis. (англ.) // Nucleic acids research. — 1980. — Vol. 8, no. 1. — P. 49—62. — PMID 6986610. [исправить]
Gouy M., Gautier C. Codon usage in bacteria: correlation with gene expressivity. (англ.) // Nucleic acids research. — 1982. — Vol. 10, no. 22. — P. 7055—7074. — PMID 6760125. [исправить]
Sharp P. M., Cowe E., Higgins D. G., Shields D. C., Wolfe K. H., Wright F. Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity. (англ.) // Nucleic acids research. — 1988. — Vol. 16, no. 17. — P. 8207—8211. — PMID 3138659. [исправить]
Bulmer M. The selection-mutation-drift theory of synonymous codon usage. (англ.) // Genetics. — 1991. — Vol. 129, no. 3. — P. 897—907. — PMID 1752426. [исправить]
Shields D. C., Sharp P. M. Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases. (англ.) // Nucleic acids research. — 1987. — Vol. 15, no. 19. — P. 8023—8040. — PMID 3118331. [исправить]
Shields D. C., Sharp P. M., Higgins D. G., Wright F. "Silent" sites in Drosophila genes are not neutral: evidence of selection among synonymous codons. (англ.) // Molecular biology and evolution. — 1988. — Vol. 5, no. 6. — P. 704—716. — PMID 3146682. [исправить]
Kanaya S., Kinouchi M., Abe T., Kudo Y., Yamada Y., Nishi T., Mori H., Ikemura T. Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome. (англ.) // Gene. — 2001. — Vol. 276, no. 1-2. — P. 89—99. — PMID 11591475. [исправить]
Knight R. D., Freeland S. J., Landweber L. F. A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes. (англ.) // Genome biology. — 2001. — Vol. 2, no. 4. — P. 0010. — PMID 11305938. [исправить]
Kanaya S., Yamada Y., Kinouchi M., Kudo Y., Ikemura T. Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. (англ.) // Journal of molecular evolution. — 2001. — Vol. 53, no. 4-5. — P. 290—298. — doi:10.1007/s002390010219. — PMID 11675589. [исправить]
Kanaya S., Yamada Y., Kudo Y., Ikemura T. Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis. (англ.) // Gene. — 1999. — Vol. 238, no. 1. — P. 143—155. — PMID 10570992. [исправить]
Yamao F., Andachi Y., Muto A., Ikemura T., Osawa S. Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins. (англ.) // Nucleic acids research. — 1991. — Vol. 19, no. 22. — P. 6119—6122. — PMID 1956771. [исправить]
Francino M. P., Ochman H. Deamination as the basis of strand-asymmetric evolution in transcribed Escherichia coli sequences. (англ.) // Molecular biology and evolution. — 2001. — Vol. 18, no. 6. — P. 1147—1150. — PMID 11371605. [исправить]
Duret L., Mouchiroud D. Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis. (англ.) // Proceedings of the National Academy of Sciences of the United States of America. — 1999. — Vol. 96, no. 8. — P. 4482—4487. — PMID 10200288. [исправить]
Akashi H. Inferring weak selection from patterns of polymorphism and divergence at "silent" sites in Drosophila DNA. (англ.) // Genetics. — 1995. — Vol. 139, no. 2. — P. 1067—1076. — PMID 7713409. [исправить]
Akashi H., Kliman R. M., Eyre-Walker A. Mutation pressure, natural selection, and the evolution of base composition in Drosophila. (англ.) // Genetica. — 1998. — Vol. 102-103, no. 1-6. — P. 49—60. — PMID 9720271. [исправить]
Akashi H., Schaeffer S. W. Natural selection and the frequency distributions of "silent" DNA polymorphism in Drosophila. (англ.) // Genetics. — 1997. — Vol. 146, no. 1. — P. 295—307. — PMID 9136019. [исправить]
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McVean G. A., Vieira J. Inferring parameters of mutation, selection and demography from patterns of synonymous site evolution in Drosophila. (англ.) // Genetics. — 2001. — Vol. 157, no. 1. — P. 245—257. — PMID 11139506. [исправить]
Nielsen R., Bauer Du Mont V. L., Hubisz M. J., Aquadro C. F. Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 1. — P. 228—235. — doi:10.1093/molbev/msl146. — PMID 17041152. [исправить]
DuMont V. B., Fay J. C., Calabrese P. P., Aquadro C. F. DNA variability and divergence at the notch locus in Drosophila melanogaster and D. simulans: a case of accelerated synonymous site divergence. (англ.) // Genetics. — 2004. — Vol. 167, no. 1. — P. 171—185. — PMID 15166145. [исправить]
Fedorov A., Saxonov S., Gilbert W. Regularities of context-dependent codon bias in eukaryotic genes. (англ.) // Nucleic acids research. — 2002. — Vol. 30, no. 5. — P. 1192—1197. — PMID 11861911. [исправить]
Sharp P. M., Li W. H. The rate of synonymous substitution in enterobacterial genes is inversely related to codon usage bias. (англ.) // Molecular biology and evolution. — 1987. — Vol. 4, no. 3. — P. 222—230. — PMID 3328816. [исправить]
Sharp P. M., Bailes E., Grocock R. J., Peden J. F., Sockett R. E. Variation in the strength of selected codon usage bias among bacteria. (англ.) // Nucleic acids research. — 2005. — Vol. 33, no. 4. — P. 1141—1153. — doi:10.1093/nar/gki242. — PMID 15728743. [исправить]
Akashi H. Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. (англ.) // Genetics. — 1994. — Vol. 136, no. 3. — P. 927—935. — PMID 8005445. [исправить]
Marais G., Duret L. Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegans. (англ.) // Journal of molecular evolution. — 2001. — Vol. 52, no. 3. — P. 275—280. — PMID 11428464. [исправить]
Stoletzki N., Eyre-Walker A. Synonymous codon usage in Escherichia coli: selection for translational accuracy. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 2. — P. 374—381. — doi:10.1093/molbev/msl166. — PMID 17101719. [исправить]
Eyre-Walker A. Synonymous codon bias is related to gene length in Escherichia coli: selection for translational accuracy? (англ.) // Molecular biology and evolution. — 1996. — Vol. 13, no. 6. — P. 864—872. — PMID 8754221. [исправить]
Shah P., Gilchrist M. A. Effect of correlated tRNA abundances on translation errors and evolution of codon usage bias. (англ.) // PLoS genetics. — 2010. — Vol. 6, no. 9. — P. e1001128. — doi:10.1371/journal.pgen.1001128. — PMID 20862306. [исправить]
Warnecke T., Hurst L. D. Evidence for a trade-off between translational efficiency and splicing regulation in determining synonymous codon usage in Drosophila melanogaster. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 12. — P. 2755—2762. — doi:10.1093/molbev/msm210. — PMID 17905999. [исправить]
Thanaraj T. A., Argos P. Ribosome-mediated translational pause and protein domain organization. (англ.) // Protein science : a publication of the Protein Society. — 1996. — Vol. 5, no. 8. — P. 1594—1612. — doi:10.1002/pro.5560050814. — PMID 8844849. [исправить]
Gu W., Zhou T., Wilke C. O. A universal trend of reduced mRNA stability near the translation-initiation site in prokaryotes and eukaryotes. (англ.) // Public Library of Science for Computational Biology. — 2010. — Vol. 6, no. 2. — P. e1000664. — doi:10.1371/journal.pcbi.1000664. — PMID 20140241. [исправить]
Tuller T., Carmi A., Vestsigian K., Navon S., Dorfan Y., Zaborske J., Pan T., Dahan O., Furman I., Pilpel Y. An evolutionarily conserved mechanism for controlling the efficiency of protein translation. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 344—354. — doi:10.1016/j.cell.2010.03.031. — PMID 20403328. [исправить]
Fredrick K., Ibba M. How the sequence of a gene can tune its translation. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 227—229. — doi:10.1016/j.cell.2010.03.033. — PMID 20403320. [исправить]
Cannarozzi G., Schraudolph N. N., Faty M., von Rohr P., Friberg M. T., Roth A. C., Gonnet P., Gonnet G., Barral Y. A role for codon order in translation dynamics. (англ.) // Cell. — 2010. — Vol. 141, no. 2. — P. 355—367. — doi:10.1016/j.cell.2010.02.036. — PMID 20403329. [исправить]
Sharp P. M., Li W. H. An evolutionary perspective on synonymous codon usage in unicellular organisms. (англ.) // Journal of molecular evolution. — 1986. — Vol. 24, no. 1-2. — P. 28—38. — PMID 3104616. [исправить]
Sharp P. M., Li W. H. The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications. (англ.) // Nucleic acids research. — 1987. — Vol. 15, no. 3. — P. 1281—1295. — PMID 3547335. [исправить]
Zeeberg B. Shannon information theoretic computation of synonymous codon usage biases in coding regions of human and mouse genomes. (англ.) // Genome research. — 2002. — Vol. 12, no. 6. — P. 944—955. — doi:10.1101/gr.213402. — PMID 12045147. [исправить]
Wan X. F., Xu D., Kleinhofs A., Zhou J. Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes. (англ.) // BMC evolutionary biology. — 2004. — Vol. 4. — P. 19. — doi:10.1186/1471-2148-4-19. — PMID 15222899. [исправить]
Su M. W., Lin H. M., Yuan H. S., Chu W. C. Categorizing host-dependent RNA viruses by principal component analysis of their codon usage preferences. (англ.) // Journal of computational biology : a journal of computational molecular cell biology. — 2009. — Vol. 16, no. 11. — P. 1539—1547. — doi:10.1089/cmb.2009.0046. — PMID 19958082. [исправить]
Kloster M., Tang C. SCUMBLE: a method for systematic and accurate detection of codon usage bias by maximum likelihood estimation. (англ.) // Nucleic acids research. — 2008. — Vol. 36, no. 11. — P. 3819—3827. — doi:10.1093/nar/gkn288. — PMID 18495752. [исправить]
Angellotti M. C., Bhuiyan S. B., Chen G., Wan X. F. CodonO: codon usage bias analysis within and across genomes. (англ.) // Nucleic acids research. — 2007. — Vol. 35. — P. 132—136. — doi:10.1093/nar/gkm392. — PMID 17537810. [исправить]
Puigbò P., Aragonès L., Garcia-Vallvé S. RCDI/eRCDI: a web-server to estimate codon usage deoptimization. (англ.) // BMC research notes. — 2010. — Vol. 3. — P. 87. — doi:10.1186/1756-0500-3-87. — PMID 20356391. [исправить]
Li G. W., Oh E., Weissman J. S. The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria. (англ.) // Nature. — 2012. — Vol. 484, no. 7395. — P. 538—541. — doi:10.1038/nature10965. — PMID 22456704. [исправить]
Vicario S., Moriyama E. N., Powell J. R. Codon usage in twelve species of Drosophila. (англ.) // BMC evolutionary biology. — 2007. — Vol. 7. — P. 226. — doi:10.1186/1471-2148-7-226. — PMID 18005411. [исправить]
Jørgensen F. G., Schierup M. H., Clark A. G. Heterogeneity in regional GC content and differential usage of codons and amino acids in GC-poor and GC-rich regions of the genome of Apis mellifera. (англ.) // Molecular biology and evolution. — 2007. — Vol. 24, no. 2. — P. 611—619. — doi:10.1093/molbev/msl190. — PMID 17150976. [исправить]
Itakura K., Hirose T., Crea R., Riggs A. D., Heyneker H. L., Bolivar F., Boyer H. W. Expression in Escherichia coli of a chemically synthesized gene for the hormone somatostatin. (англ.) // Science (New York, N.Y.). — 1977. — Vol. 198, no. 4321. — P. 1056—1063. — PMID 412251. [исправить]
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Kink J. A., Maley M. E., Ling K. Y., Kanabrocki J. A., Kung C. Efficient expression of the Paramecium calmodulin gene in Escherichia coli after four TAA-to-CAA changes through a series of polymerase chain reactions. (англ.) // The Journal of protozoology. — 1991. — Vol. 38, no. 5. — P. 441—447. — PMID 1920142. [исправить]
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Mauro V. P., Chappell S. A. A critical analysis of codon optimization in human therapeutics. (англ.) // Trends in molecular medicine. — 2014. — Vol. 20, no. 11. — P. 604—613. — doi:10.1016/j.molmed.2014.09.003. — PMID 25263172. [исправить]

wikipedia.org

ru.wikipedia.org

Hershberg R., Petrov D. A. Selection on codon bias. (англ.) // Annual review of genetics. — 2008. — Vol. 42. — P. 287—299. — doi:10.1146/annurev.genet.42.110807.091442. — PMID 18983258. [исправить]
Behura S. K., Severson D. W. Codon usage bias: causative factors, quantification methods and genome-wide patterns: with emphasis on insect genomes. (англ.) // Biological reviews of the Cambridge Philosophical Society. — 2013. — Vol. 88, no. 1. — P. 49—61. — doi:10.1111/j.1469-185X.2012.00242.x. — PMID 22889422. [исправить]
Andersson G. E., Sharp P. M. Codon usage in the Mycobacterium tuberculosis complex. (англ.) // Microbiology (Reading, England). — 1996. — Vol. 142 ( Pt 4). — P. 915—925. — PMID 8936318. [исправить]
Andersson S. G., Sharp P. M. Codon usage and base composition in Rickettsia prowazekii. (англ.) // Journal of molecular evolution. — 1996. — Vol. 42, no. 5. — P. 525—536. — PMID 8662004. [исправить]
Duret L. Evolution of synonymous codon usage in metazoans. (англ.) // Current opinion in genetics & development. — 2002. — Vol. 12, no. 6. — P. 640—649. — PMID 12433576. [исправить]
Ikemura T. Codon usage and tRNA content in unicellular and multicellular organisms. (англ.) // Molecular biology and evolution. — 1985. — Vol. 2, no. 1. — P. 13—34. — PMID 3916708. [исправить]
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